Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002034.1

Orthogroup ID

OG0012592

Physical Location & Seq

Genomic Coordinates Forward (+)

37212 .. 39788

Gene Structure 2577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002034.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

atggaagtccatgcccacttaatcagattcaggttgtcccaagactcgagctttcggaaccatttgatcaatttctacgcaaaaagcaggttttttgggcatgcccggaagctgatcgacgaaagtcctgaaccagatttggttgcttggtctgctttgatttctgggtatgcccagaatgggcttggtagagaagcaatttcagcttttcatgagatgcatggattgggggtcaagtgtaatgagtttacattcccaagtgtgctcaaggcttgctcttattctaaagatttgaggctgggaaagcaggttcatggggtggtgttggttaccgggtttgagtccgatgagtttgttgctaatactctggttgttatgtattcgaaatgtggggagtttggggattccaggaggctgtttgatgcaattctggagaggaatgttgtttcgtggaatgcgttgttttcgtgttatgtgcagagtgatttctttggggaggcaatggatttgtttgaggaaatggttgtgagtggaataaggcctaatgagtatagtctgtctagtataataaatgcttgtactggattgggggatggtagaagaggaaggaaaattcatggatatatagttaagcttgggtatgattctgattctttctcagccaatgcgcttgttgacatgtatgcaaaagccaaaggtcttgaagatgcaatttcagtttttgagaaaattgcacaaccagatattgtatcctggaatgctgttattgctggttgtgttcttcacaactgccatggtcgggcgctcaaattgttcaggcaactgagagggtcaggaatccgtcctaatatgtttacattatcaagtgcgcttaaagcttgtgctgggatgggtttcgagaaattgggtaggcagttgcactctttcttgataaggatggatacagaatcagattcatatgtcaaagttggactgatagatatgtattgcaagtgtgagatgatgactgatgcaaggatgctttttaatatgatgccaaagaaagacatgattgcatggaatgctgttatctctggtcattcacagatggctgaagacagagaagctgtaaccctctttcctgaaatgcatagggaaggaataggattcaatgagactactttgtctacagtcctcaaatccgccgcgagcttgcaggcagtaaaagtttgtgaacaagttcacgctctttcaatcaaaataggttttcagtctgacatgtatgttataaatagccttcttgatacatatggaaaatgtggccaagtagaaaatgcagtaagaatttttgaagaatgcaaaactgaagatttggtggctttcacatcaatgatcactgcctatgctcaatatgaacaaggcgaagaagctcttaaactctatgtgcaaatgctaatgaaggggaacaagcctgattcatttgtatgcagttctcttctgaatgcttgtgcaaatttgtcggcatatgagcaagggaagcagattcatgttcatattctgaagtttggatttttgtctgatgcttttgccggaaattcccttgttaatatgtatgcaaaatgtggaagcatagatgatgcaggtcgtgctttctctgaggtacctgagagaggaatagtttcatggtctgcaatgattggtggacttgctcaacacggacatggaaaagaggccctcaatatgttcaatcaaatgctcagagatggtatttgccccaatcatattactttagtgagtgtcctctgtgcatgcaatcatgcaggtttggtaactgaagccagaaaatattttgagtcaatgaaagagttgtttggagttgtgccaaggggggagcattttgcctgcatgattgatcttcttggcagagcaggaaagataagcgaggcaatggagcttgtcaacacaatgccatttcaagcaaacgcctcagtttgggggtcccttcttggtgccgcaagaatccataaaaatgttgatcttggtgaacgtgctgctgatatgctcttagttctggagcctgagaaatccggtacccatgtacttcttgcaaacatttatgcagcagctggcatgtgggacaaggtagcaaaaatgagaagacttatgaaaaataaccaggtaaagaaggaacctggaatgagttggattgaggtccaagacaaggtacacacctttattgtaggagatagaagtcattcaagaagcacggagatatatgcaaaacttgatgagctgcttgaccttgtgcataaagctggctatgttccaatggtggagattgacctccatgatgtggaaccaagtgagaaggagcgacttctgcgataccacagtgagaagcttgcagtggctttcgcattgattgtcactccgcctggagctcccattagagtgaagaagaatttaagagtatgtgtagattgccatactgcattcaagttcatctgtaaaattgtctcgagggagataatcgtgagggacatcaatagattccatcatttcaaagatggctcatgctcttgtggggattactggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

858

Amino Acids

95.61

Weight (kDa)

6.78

Isoelectric Point (pI)

38.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012592)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g08720 FvH4_7g02630
malus_domestica	MD10G1290200.v1.1
prunus_persica	Prupe.4G051600_v2.0.a1
pyrus_communis	pycom05g28730 pycom10g24240
rosa_chinensis	RchiOBHm_Chr5g0009041
rosa_laevigata	RLG00000031625
rosa_multiflora	Rmu_co8303565.1_g000001 Rmu_sc0002034.1_g000012 Rmu_sc0039526.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066980
rosa_rugosa	Rorug04G0440900
rosa_samantha	Rh5AG069900 Rh5BG066600 Rh5BG066800 Rh5CG078000 Rh5DG066100
rosa_wichuraiana	Rw5G006530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1268
AasI	GACNNNNNNGTC	1 cut(s)	1162
Acc36I	ACCTGC	4 cut(s)	78, 298, 1610, 1790
Acc65I	GGTACC	2 cut(s)	1639, 2069
AccB1I	GGYRCC	3 cut(s)	1639, 1988, 2069
AccB7I	CCANNNNNTGG	1 cut(s)	2332
AccI	GTMKAC	1 cut(s)	1166
AccII	CGCG	1 cut(s)	1187
AciI	CCGC	4 cut(s)	1182, 1185, 1992, 2411
AcoI	YGGCCR	1 cut(s)	1300
AcsI	RAATTY	5 cut(s)	612, 1323, 1492, 1573, 2440
AcuI	CTGAAG	4 cut(s)	1113, 1365, 1559, 1833
AfaI	GTAC	5 cut(s)	580, 1641, 2071, 2079, 2205
AfiI	CCNNNNNNNGG	6 cut(s)	180, 799, 1649, 1971, 2200, 2332
AflIII	ACRYGT	2 cut(s)	678, 1257
AgsI	TTSAA	9 cut(s)	704, 1150, 1233, 1331, 1726, 1955, 2238, 2476, 2542
AjnI	CCWGG	5 cut(s)	407, 752, 2154, 2170, 2413
AloI	GAACNNNNNNTCC	2 cut(s)	294, 326
Alw21I	GWGCWC	2 cut(s)	267, 2422
Alw26I	GTCTC	2 cut(s)	1148, 2500
AlwNI	CAGNNNCTG	1 cut(s)	2105
Ama87I	CYCGRG	2 cut(s)	46, 2497
AoxI	GGCC	3 cut(s)	539, 1300, 1710
ApeKI	GCWGC	4 cut(s)	2030, 2099, 2102, 2272
ApoI	RAATTY	5 cut(s)	612, 1323, 1492, 1573, 2440
Asp700I	GAANNNNTTC	3 cut(s)	1218, 1657, 2233
Asp718I	GGTACC	2 cut(s)	1639, 2069
AspLEI	GCGC	3 cut(s)	670, 805, 871
AspS9I	GGNCC	3 cut(s)	1711, 1977, 2191
AsuC2I	CCSGG	2 cut(s)	106, 334
AsuHPI	GGTGA	1 cut(s)	2033
AsuII	TTCGAA	1 cut(s)	383
AvaI	CYCGRG	2 cut(s)	46, 2497
AvaII	GGWCC	2 cut(s)	1977, 2191
BaeI	ACNNNNGTAYC	4 cut(s)	2061, 2094, 2356, 2389
BalI	TGGCCA	1 cut(s)	1302
BanI	GGYRCC	3 cut(s)	1639, 1988, 2069
BanII	GRGCYC	1 cut(s)	2422
BbsI	GAAGAC	2 cut(s)	1101, 2143
Bbv12I	GWGCWC	2 cut(s)	267, 2422
BbvI	GCAGC	4 cut(s)	2017, 2111, 2114, 2259
BccI	CCATC	7 cut(s)	587, 883, 931, 1081, 1736, 2540, 2541
BcgI	CGANNNNNNTGC	2 cut(s)	1479, 1513
BciT130I	CCWGG	5 cut(s)	409, 754, 2156, 2172, 2415
BciVI	GTATCC	2 cut(s)	760, 934
BclI	TGATCA	2 cut(s)	66, 1371
BcnI	CCSGG	2 cut(s)	106, 334
BcoDI	GTCTC	2 cut(s)	1148, 2500
BfaI	CTAG	1 cut(s)	561
BfmI	CTRYAG	1 cut(s)	1167
BfoI	RGCGCY	1 cut(s)	806
BfuAI	ACCTGC	4 cut(s)	78, 298, 1610, 1790
BfuI	GTATCC	2 cut(s)	760, 934
BisI	GCNGC	6 cut(s)	1185, 1992, 2031, 2100, 2103, 2273
BlsI	GCNGC	6 cut(s)	1186, 1993, 2032, 2101, 2104, 2274
Bme1390I	CCNGG	7 cut(s)	106, 334, 409, 754, 2156, 2172, 2415
Bme18I	GGWCC	2 cut(s)	1977, 2191
BmeT110I	CYCGRG	2 cut(s)	46, 2497
BmgT120I	GGNCC	3 cut(s)	1711, 1977, 2191
BmiI	GGNNCC	9 cut(s)	59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
BmrFI	CCNGG	7 cut(s)	106, 334, 409, 754, 2156, 2172, 2415
BmsI	GCATC	8 cut(s)	207, 412, 697, 1000, 1008, 1023, 1549, 1606
BoxI	GACNNNNGTC	1 cut(s)	123
BpiI	GAAGAC	2 cut(s)	1101, 2143
BpmI	CTGGAG	3 cut(s)	452, 2072, 2436
Bpu14I	TTCGAA	1 cut(s)	383
BpuEI	CTTGAG	1 cut(s)	251
BpuMI	CCSGG	2 cut(s)	106, 334
BsaJI	CCNNGG	2 cut(s)	793, 1862
BsaWI	WCCGGW	1 cut(s)	2066
Bsc4I	CCNNNNNNNGG	6 cut(s)	180, 799, 1649, 1971, 2200, 2332
Bse1I	ACTGG	2 cut(s)	586, 2576
Bse3DI	GCAATG	3 cut(s)	507, 1677, 1932
BseBI	CCWGG	5 cut(s)	409, 754, 2156, 2172, 2415
BseDI	CCNNGG	2 cut(s)	793, 1862
BseGI	GGATG	4 cut(s)	598, 894, 942, 1023
BseLI	CCNNNNNNNGG	6 cut(s)	180, 799, 1649, 1971, 2200, 2332
BseMI	GCAATG	3 cut(s)	507, 1677, 1932
BseMII	CTCAG	7 cut(s)	672, 815, 1626, 1635, 1750, 1980, 2049
BseNI	ACTGG	2 cut(s)	586, 2576
BseXI	GCAGC	4 cut(s)	2017, 2111, 2114, 2259
BseYI	CCCAGC	2 cut(s)	298, 884
BsgI	GTGCAG	1 cut(s)	497
Bsh1236I	CGCG	1 cut(s)	1187
BshFI	GGCC	3 cut(s)	541, 1302, 1712
BshNI	GGYRCC	3 cut(s)	1639, 1988, 2069
BsiHKAI	GWGCWC	2 cut(s)	267, 2422
BsiHKCI	CYCGRG	2 cut(s)	46, 2497
BsiSI	CCGG	4 cut(s)	106, 333, 1569, 2067
BslFI	GGGAC	4 cut(s)	22, 1963, 2129, 2531
BslI	CCNNNNNNNGG	6 cut(s)	180, 799, 1649, 1971, 2200, 2332
BsmAI	GTCTC	2 cut(s)	1148, 2500
BsmFI	GGGAC	4 cut(s)	22, 1963, 2129, 2531
BsmI	GAATGC	6 cut(s)	460, 763, 1066, 1340, 1486, 2471
BsnI	GGCC	3 cut(s)	541, 1302, 1712
BsoBI	CYCGRG	2 cut(s)	46, 2497
Bsp119I	TTCGAA	1 cut(s)	383
Bsp1286I	GDGCHC	2 cut(s)	267, 2422
Bsp143I	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
Bsp19I	CCATGG	1 cut(s)	793
BspACI	CCGC	4 cut(s)	1182, 1185, 1992, 2411
BspANI	GGCC	3 cut(s)	541, 1302, 1712
BspCNI	CTCAG	7 cut(s)	671, 816, 1627, 1636, 1749, 1979, 2050
BspFNI	CGCG	1 cut(s)	1187
BspHI	TCATGA	1 cut(s)	211
BspLI	GGNNCC	9 cut(s)	59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
BspMI	ACCTGC	4 cut(s)	78, 298, 1610, 1790
BspT104I	TTCGAA	1 cut(s)	383
BspT107I	GGYRCC	3 cut(s)	1639, 1988, 2069
BsrDI	GCAATG	3 cut(s)	507, 1677, 1932
BsrI	ACTGG	2 cut(s)	586, 2576
BssECI	CCNNGG	2 cut(s)	793, 1862
BssMI	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
BssT1I	CCWWGG	2 cut(s)	793, 1862
Bst2UI	CCWGG	5 cut(s)	409, 754, 2156, 2172, 2415
Bst4CI	ACNGT	2 cut(s)	1171, 2372
Bst6I	CTCTTC	2 cut(s)	595, 1479
BstAPI	GCANNNNNTGC	2 cut(s)	1061, 1625
BstBI	TTCGAA	1 cut(s)	383
BstDEI	CTNAG	8 cut(s)	658, 824, 1635, 1644, 1736, 1966, 2044, 2058
BstDSI	CCRYGG	1 cut(s)	793
BstEII	GGTNACC	1 cut(s)	328
BstENI	CCTNNNNNAGG	1 cut(s)	1647
BstF5I	GGATG	4 cut(s)	598, 894, 942, 1023
BstFNI	CGCG	1 cut(s)	1187
BstH2I	RGCGCY	1 cut(s)	806
BstHHI	GCGC	3 cut(s)	670, 805, 871
BstKTI	GATC	5 cut(s)	69, 117, 1374, 1894, 2017
BstMAI	GTCTC	2 cut(s)	1148, 2500
BstMBI	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 203, 304, 767, 875, 1061, 1516, 1625, 2359
BstNI	CCWGG	5 cut(s)	409, 754, 2156, 2172, 2415
BstNSI	RCATGY	5 cut(s)	104, 682, 1261, 1791, 2113
BstPAI	GACNNNNGTC	1 cut(s)	123
BstPI	GGTNACC	1 cut(s)	328
BstSCI	CCNGG	7 cut(s)	104, 332, 407, 752, 2154, 2170, 2413
BstSFI	CTRYAG	1 cut(s)	1167
BstUI	CGCG	1 cut(s)	1187
BstV1I	GCAGC	4 cut(s)	2017, 2111, 2114, 2259
BstV2I	GAAGAC	2 cut(s)	1101, 2143
BsuI	GTATCC	2 cut(s)	760, 934
BsuRI	GGCC	3 cut(s)	541, 1302, 1712
BtgI	CCRYGG	1 cut(s)	793
BtsCI	GGATG	4 cut(s)	598, 894, 942, 1023
BtsI	GCAGTG	2 cut(s)	1374, 2391
BtsIMutI	CAGTG	3 cut(s)	1374, 2377, 2391
BveI	ACCTGC	4 cut(s)	78, 298, 1610, 1790
CaiI	CAGNNNCTG	1 cut(s)	2105
CciI	TCATGA	1 cut(s)	211
CfoI	GCGC	3 cut(s)	670, 805, 871
Cfr13I	GGNCC	3 cut(s)	1711, 1977, 2191
CsiI	ACCWGGT	1 cut(s)	2154
Csp6I	GTAC	5 cut(s)	579, 1640, 2070, 2078, 2204
CviQI	GTAC	5 cut(s)	579, 1640, 2070, 2078, 2204
DdeI	CTNAG	8 cut(s)	658, 824, 1635, 1644, 1736, 1966, 2044, 2058
DpnI	GATC	5 cut(s)	68, 116, 1373, 1893, 2016
DpnII	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
DrdI	GACNNNNNNGTC	1 cut(s)	1162
DseDI	GACNNNNNNGTC	1 cut(s)	1162
EaeI	YGGCCR	1 cut(s)	1300
Eam1104I	CTCTTC	2 cut(s)	595, 1479
EarI	CTCTTC	2 cut(s)	595, 1479
EciI	GGCGGA	2 cut(s)	1171, 2400
Ecl136II	GAGCTC	1 cut(s)	2420
Eco130I	CCWWGG	2 cut(s)	793, 1862
Eco147I	AGGCCT	1 cut(s)	541
Eco24I	GRGCYC	1 cut(s)	2422
Eco47I	GGWCC	2 cut(s)	1977, 2191
Eco53kI	GAGCTC	1 cut(s)	2420
Eco57I	CTGAAG	4 cut(s)	1113, 1365, 1559, 1833
Eco88I	CYCGRG	2 cut(s)	46, 2497
Eco91I	GGTNACC	1 cut(s)	328
EcoICRI	GAGCTC	1 cut(s)	2420
EcoNI	CCTNNNNNAGG	1 cut(s)	1647
EcoO109I	RGGNCCY	2 cut(s)	1711, 1977
EcoO65I	GGTNACC	1 cut(s)	328
EcoRII	CCWGG	5 cut(s)	407, 752, 2154, 2170, 2413
EcoT14I	CCWWGG	2 cut(s)	793, 1862
EcoT22I	ATGCAT	2 cut(s)	222, 1131
EcoT38I	GRGCYC	1 cut(s)	2422
ErhI	CCWWGG	2 cut(s)	793, 1862
FalI	AAGNNNNNCTT	2 cut(s)	1395, 1427
FaqI	GGGAC	4 cut(s)	22, 1963, 2129, 2531
FauNDI	CATATG	3 cut(s)	958, 1288, 1504
FbaI	TGATCA	2 cut(s)	66, 1371
FblI	GTMKAC	1 cut(s)	1166
Fnu4HI	GCNGC	6 cut(s)	1185, 1992, 2031, 2100, 2103, 2273
FokI	GGATG	4 cut(s)	605, 901, 949, 1030
FriOI	GRGCYC	1 cut(s)	2422
Fsp4HI	GCNGC	6 cut(s)	1185, 1992, 2031, 2100, 2103, 2273
FspBI	CTAG	1 cut(s)	561
GlaI	GCGC	3 cut(s)	669, 804, 870
GluI	GCNGC	6 cut(s)	1185, 1992, 2031, 2100, 2103, 2273
GsaI	CCCAGC	2 cut(s)	302, 888
GsuI	CTGGAG	3 cut(s)	452, 2072, 2436
HaeII	RGCGCY	1 cut(s)	806
HaeIII	GGCC	3 cut(s)	541, 1302, 1712
HapII	CCGG	4 cut(s)	106, 333, 1569, 2067
HhaI	GCGC	3 cut(s)	670, 805, 871
Hin6I	GCGC	3 cut(s)	668, 803, 869
HinP1I	GCGC	3 cut(s)	668, 803, 869
HincII	GTYRAC	2 cut(s)	676, 1939
HindII	GTYRAC	2 cut(s)	676, 1939
HindIII	AAGCTT	3 cut(s)	632, 876, 2378
HpaII	CCGG	4 cut(s)	106, 333, 1569, 2067
HphI	GGTGA	1 cut(s)	2033
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	7 cut(s)	600, 1130, 1286, 1432, 1991, 2158, 2341
HpyCH4III	ACNGT	2 cut(s)	1171, 2372
HpyCH4IV	ACGT	1 cut(s)	2026
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 203, 304, 767, 875, 1061, 1516, 1625, 2359
HpyF3I	CTNAG	8 cut(s)	658, 824, 1635, 1644, 1736, 1966, 2044, 2058
HpySE526I	ACGT	1 cut(s)	2026
HspAI	GCGC	3 cut(s)	668, 803, 869
KflI	GGGWCCC	1 cut(s)	1977
KpnI	GGTACC	2 cut(s)	1643, 2073
Ksp22I	TGATCA	2 cut(s)	66, 1371
Kzo9I	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
LmnI	GCTCC	6 cut(s)	1870, 1930, 2053, 2350, 2417, 2425
Lsp1109I	GCAGC	4 cut(s)	2017, 2111, 2114, 2259
LweI	GCATC	8 cut(s)	207, 412, 697, 1000, 1008, 1023, 1549, 1606
MabI	ACCWGGT	1 cut(s)	2154
MaeI	CTAG	1 cut(s)	561
MaeII	ACGT	1 cut(s)	2026
MaeIII	GTNAC	4 cut(s)	328, 1108, 1807, 2404
MalI	GATC	5 cut(s)	68, 116, 1373, 1893, 2016
MboI	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
MhlI	GDGCHC	2 cut(s)	267, 2422
MlsI	TGGCCA	1 cut(s)	1302
MluNI	TGGCCA	1 cut(s)	1302
MlyI	GAGTC	3 cut(s)	38, 350, 1841
MmeI	TCCRAC	2 cut(s)	949, 2162
Mox20I	TGGCCA	1 cut(s)	1302
Mph1103I	ATGCAT	2 cut(s)	222, 1131
MroXI	GAANNNNTTC	3 cut(s)	1218, 1657, 2233
MscI	TGGCCA	1 cut(s)	1302
MseI	TTAA	7 cut(s)	20, 630, 873, 1026, 1413, 1584, 2444
MslI	CAYNNNNRTG	5 cut(s)	1367, 1462, 1698, 2007, 2429
Msp20I	TGGCCA	1 cut(s)	1302
MspA1I	CMGCKG	1 cut(s)	2105
MspI	CCGG	4 cut(s)	106, 333, 1569, 2067
MspR9I	CCNGG	7 cut(s)	106, 334, 409, 754, 2156, 2172, 2415
Mva1269I	GAATGC	6 cut(s)	460, 763, 1066, 1340, 1486, 2471
MvaI	CCWGG	5 cut(s)	409, 754, 2156, 2172, 2415
MvnI	CGCG	1 cut(s)	1187
MwoI	GCNNNNNNNGC	9 cut(s)	152, 203, 304, 767, 875, 1061, 1516, 1625, 2359
NciI	CCSGG	2 cut(s)	106, 334
NcoI	CCATGG	1 cut(s)	793
NdeI	CATATG	3 cut(s)	958, 1288, 1504
NdeII	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
NlaIV	GGNNCC	9 cut(s)	59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
NmuCI	GTSAC	1 cut(s)	2404
NsiI	ATGCAT	2 cut(s)	222, 1131
NspI	RCATGY	5 cut(s)	104, 682, 1261, 1791, 2113
NspV	TTCGAA	1 cut(s)	383
PaeI	GCATGC	2 cut(s)	104, 1791
PaeR7I	CTCGAG	2 cut(s)	46, 2497
PagI	TCATGA	1 cut(s)	211
PceI	AGGCCT	1 cut(s)	541
PciI	ACATGT	2 cut(s)	678, 1257
PcsI	WCGNNNNNNNCGW	1 cut(s)	455
PctI	GAATGC	6 cut(s)	460, 763, 1066, 1340, 1486, 2471
PdmI	GAANNNNTTC	3 cut(s)	1218, 1657, 2233
PflMI	CCANNNNNTGG	1 cut(s)	2332
PfoI	TCCNGGA	2 cut(s)	407, 752
PkrI	GCNGC	6 cut(s)	1186, 1993, 2032, 2101, 2104, 2274
PleI	GAGTC	3 cut(s)	38, 349, 1840
PpsI	GAGTC	3 cut(s)	38, 349, 1840
PpuMI	RGGWCCY	1 cut(s)	1977
PscI	ACATGT	2 cut(s)	678, 1257
PshAI	GACNNNNGTC	1 cut(s)	123
PsiI	TTATAA	1 cut(s)	1268
Psp124BI	GAGCTC	1 cut(s)	2422
Psp5II	RGGWCCY	1 cut(s)	1977
Psp6I	CCWGG	5 cut(s)	407, 752, 2154, 2170, 2413
PspEI	GGTNACC	1 cut(s)	328
PspFI	CCCAGC	2 cut(s)	298, 884
PspGI	CCWGG	5 cut(s)	407, 752, 2154, 2170, 2413
PspN4I	GGNNCC	9 cut(s)	59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
PspPI	GGNCC	3 cut(s)	1711, 1977, 2191
PspPPI	RGGWCCY	1 cut(s)	1977
PspXI	VCTCGAGB	1 cut(s)	46
PstNI	CAGNNNCTG	1 cut(s)	2105
PvuII	CAGCTG	1 cut(s)	2105
RsaI	GTAC	5 cut(s)	580, 1641, 2071, 2079, 2205
RsaNI	GTAC	5 cut(s)	579, 1640, 2070, 2078, 2204
RseI	CAYNNNNRTG	5 cut(s)	1367, 1462, 1698, 2007, 2429
SacI	GAGCTC	1 cut(s)	2422
SaqAI	TTAA	7 cut(s)	20, 630, 873, 1026, 1413, 1584, 2444
SatI	GCNGC	6 cut(s)	1185, 1992, 2031, 2100, 2103, 2273
Sau3AI	GATC	5 cut(s)	66, 114, 1371, 1891, 2014
Sau96I	GGNCC	3 cut(s)	1711, 1977, 2191
SchI	GAGTC	3 cut(s)	38, 350, 1841
ScrFI	CCNGG	7 cut(s)	106, 334, 409, 754, 2156, 2172, 2415
SduI	GDGCHC	2 cut(s)	267, 2422
SexAI	ACCWGGT	1 cut(s)	2154
SfaNI	GCATC	8 cut(s)	207, 412, 697, 1000, 1008, 1023, 1549, 1606
SfcI	CTRYAG	1 cut(s)	1167
Sfr274I	CTCGAG	2 cut(s)	46, 2497
SfuI	TTCGAA	1 cut(s)	383
SinI	GGWCC	2 cut(s)	1977, 2191
SlaI	CTCGAG	2 cut(s)	46, 2497
SmiMI	CAYNNNNRTG	5 cut(s)	1367, 1462, 1698, 2007, 2429
SmlI	CTYRAG	3 cut(s)	46, 266, 2497
SmoI	CTYRAG	3 cut(s)	46, 266, 2497
SphI	GCATGC	2 cut(s)	104, 1791
SseBI	AGGCCT	1 cut(s)	541
SsiI	CCGC	4 cut(s)	1182, 1185, 1992, 2411
SspI	AATATT	1 cut(s)	1826
SspMI	CTAG	1 cut(s)	561
SstI	GAGCTC	1 cut(s)	2422
StuI	AGGCCT	1 cut(s)	541
StyD4I	CCNGG	7 cut(s)	104, 332, 407, 752, 2154, 2170, 2413
StyI	CCWWGG	2 cut(s)	793, 1862
TaaI	ACNGT	2 cut(s)	1171, 2372
TaiI	ACGT	1 cut(s)	2029
TaqI	TCGA	5 cut(s)	47, 117, 383, 897, 2498
TatI	WGTACW	2 cut(s)	578, 2077
TauI	GCSGC	2 cut(s)	1187, 1994
Tru1I	TTAA	7 cut(s)	20, 630, 873, 1026, 1413, 1584, 2444
Tru9I	TTAA	7 cut(s)	20, 630, 873, 1026, 1413, 1584, 2444
TscAI	CASTG	3 cut(s)	1381, 2377, 2391
TseFI	GTSAC	1 cut(s)	2404
TseI	GCWGC	4 cut(s)	2030, 2099, 2102, 2272
Tsp45I	GTSAC	1 cut(s)	2404
TspGWI	ACGGA	3 cut(s)	830, 1710, 2261
TspRI	CASTG	3 cut(s)	1381, 2377, 2391
Van91I	CCANNNNNTGG	1 cut(s)	2332
VpaK11BI	GGWCC	2 cut(s)	1977, 2191
XagI	CCTNNNNNAGG	1 cut(s)	1647
XapI	RAATTY	5 cut(s)	612, 1323, 1492, 1573, 2440
XceI	RCATGY	5 cut(s)	104, 682, 1261, 1791, 2113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	182
XhoI	CTCGAG	2 cut(s)	46, 2497
XmiI	GTMKAC	1 cut(s)	1166
XmnI	GAANNNNTTC	3 cut(s)	1218, 1657, 2233
XspI	CTAG	1 cut(s)	561
Zsp2I	ATGCAT	2 cut(s)	222, 1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.