Rmu_sc0002034.1_g000012

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002034.1
OG0012592
Physical Location & Seq
Forward (+)
37212 .. 39788
2577 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2577 bp
atggaagtccatgcccacttaatcagattcaggttgtcccaagactcgagctttcggaaccatttgatcaatttctacgcaaaaagcaggttttttgggcatgcccggaagctgatcgacgaaagtcctgaaccagatttggttgcttggtctgctttgatttctgggtatgcccagaatgggcttggtagagaagcaatttcagcttttcatgagatgcatggattgggggtcaagtgtaatgagtttacattcccaagtgtgctcaaggcttgctcttattctaaagatttgaggctgggaaagcaggttcatggggtggtgttggttaccgggtttgagtccgatgagtttgttgctaatactctggttgttatgtattcgaaatgtggggagtttggggattccaggaggctgtttgatgcaattctggagaggaatgttgtttcgtggaatgcgttgttttcgtgttatgtgcagagtgatttctttggggaggcaatggatttgtttgaggaaatggttgtgagtggaataaggcctaatgagtatagtctgtctagtataataaatgcttgtactggattgggggatggtagaagaggaaggaaaattcatggatatatagttaagcttgggtatgattctgattctttctcagccaatgcgcttgttgacatgtatgcaaaagccaaaggtcttgaagatgcaatttcagtttttgagaaaattgcacaaccagatattgtatcctggaatgctgttattgctggttgtgttcttcacaactgccatggtcgggcgctcaaattgttcaggcaactgagagggtcaggaatccgtcctaatatgtttacattatcaagtgcgcttaaagcttgtgctgggatgggtttcgagaaattgggtaggcagttgcactctttcttgataaggatggatacagaatcagattcatatgtcaaagttggactgatagatatgtattgcaagtgtgagatgatgactgatgcaaggatgctttttaatatgatgccaaagaaagacatgattgcatggaatgctgttatctctggtcattcacagatggctgaagacagagaagctgtaaccctctttcctgaaatgcatagggaaggaataggattcaatgagactactttgtctacagtcctcaaatccgccgcgagcttgcaggcagtaaaagtttgtgaacaagttcacgctctttcaatcaaaataggttttcagtctgacatgtatgttataaatagccttcttgatacatatggaaaatgtggccaagtagaaaatgcagtaagaatttttgaagaatgcaaaactgaagatttggtggctttcacatcaatgatcactgcctatgctcaatatgaacaaggcgaagaagctcttaaactctatgtgcaaatgctaatgaaggggaacaagcctgattcatttgtatgcagttctcttctgaatgcttgtgcaaatttgtcggcatatgagcaagggaagcagattcatgttcatattctgaagtttggatttttgtctgatgcttttgccggaaattcccttgttaatatgtatgcaaaatgtggaagcatagatgatgcaggtcgtgctttctctgaggtacctgagagaggaatagtttcatggtctgcaatgattggtggacttgctcaacacggacatggaaaagaggccctcaatatgttcaatcaaatgctcagagatggtatttgccccaatcatattactttagtgagtgtcctctgtgcatgcaatcatgcaggtttggtaactgaagccagaaaatattttgagtcaatgaaagagttgtttggagttgtgccaaggggggagcattttgcctgcatgattgatcttcttggcagagcaggaaagataagcgaggcaatggagcttgtcaacacaatgccatttcaagcaaacgcctcagtttgggggtcccttcttggtgccgcaagaatccataaaaatgttgatcttggtgaacgtgctgctgatatgctcttagttctggagcctgagaaatccggtacccatgtacttcttgcaaacatttatgcagcagctggcatgtgggacaaggtagcaaaaatgagaagacttatgaaaaataaccaggtaaagaaggaacctggaatgagttggattgaggtccaagacaaggtacacacctttattgtaggagatagaagtcattcaagaagcacggagatatatgcaaaacttgatgagctgcttgaccttgtgcataaagctggctatgttccaatggtggagattgacctccatgatgtggaaccaagtgagaaggagcgacttctgcgataccacagtgagaagcttgcagtggctttcgcattgattgtcactccgcctggagctcccattagagtgaagaagaatttaagagtatgtgtagattgccatactgcattcaagttcatctgtaaaattgtctcgagggagataatcgtgagggacatcaatagattccatcatttcaaagatggctcatgctcttgtggggattactggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

858

Amino Acids

95.61

Weight (kDa)

6.78

Isoelectric Point (pI)

38.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 45 - 92 7.5e-10 PPR repeat family
PPR PF01535 48 - 78 4e-07 PPR repeat
PPR_2 PF13041 146 - 193 5.4e-12 PPR repeat family
PPR PF01535 149 - 179 5.1e-07 PPR repeat
PPR_2 PF13041 247 - 295 5.6e-09 PPR repeat family
PPR_2 PF13041 450 - 498 7e-10 PPR repeat family
PPR_2 PF13041 551 - 597 8.4e-10 PPR repeat family
PPR PF01535 553 - 583 1.5e-07 PPR repeat
E_motif PF20431 668 - 730 6.4e-21 E motif
Eplus_motif PF20430 735 - 760 2.1e-07 E+ motif
DYW_deaminase PF14432 766 - 858 1.4e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1268
AasI GACNNNNNNGTC 1 cut(s) 1162
Acc36I ACCTGC 4 cut(s) 78, 298, 1610, 1790
Acc65I GGTACC 2 cut(s) 1639, 2069
AccB1I GGYRCC 3 cut(s) 1639, 1988, 2069
AccB7I CCANNNNNTGG 1 cut(s) 2332
AccI GTMKAC 1 cut(s) 1166
AccII CGCG 1 cut(s) 1187
AciI CCGC 4 cut(s) 1182, 1185, 1992, 2411
AcoI YGGCCR 1 cut(s) 1300
AcsI RAATTY 5 cut(s) 612, 1323, 1492, 1573, 2440
AcuI CTGAAG 4 cut(s) 1113, 1365, 1559, 1833
AfaI GTAC 5 cut(s) 580, 1641, 2071, 2079, 2205
AfiI CCNNNNNNNGG 6 cut(s) 180, 799, 1649, 1971, 2200, 2332
AflIII ACRYGT 2 cut(s) 678, 1257
AgsI TTSAA 9 cut(s) 704, 1150, 1233, 1331, 1726, 1955, 2238, 2476, 2542
AjnI CCWGG 5 cut(s) 407, 752, 2154, 2170, 2413
AloI GAACNNNNNNTCC 2 cut(s) 294, 326
Alw21I GWGCWC 2 cut(s) 267, 2422
Alw26I GTCTC 2 cut(s) 1148, 2500
AlwNI CAGNNNCTG 1 cut(s) 2105
Ama87I CYCGRG 2 cut(s) 46, 2497
AoxI GGCC 3 cut(s) 539, 1300, 1710
ApeKI GCWGC 4 cut(s) 2030, 2099, 2102, 2272
ApoI RAATTY 5 cut(s) 612, 1323, 1492, 1573, 2440
Asp700I GAANNNNTTC 3 cut(s) 1218, 1657, 2233
Asp718I GGTACC 2 cut(s) 1639, 2069
AspLEI GCGC 3 cut(s) 670, 805, 871
AspS9I GGNCC 3 cut(s) 1711, 1977, 2191
AsuC2I CCSGG 2 cut(s) 106, 334
AsuHPI GGTGA 1 cut(s) 2033
AsuII TTCGAA 1 cut(s) 383
AvaI CYCGRG 2 cut(s) 46, 2497
AvaII GGWCC 2 cut(s) 1977, 2191
BaeI ACNNNNGTAYC 4 cut(s) 2061, 2094, 2356, 2389
BalI TGGCCA 1 cut(s) 1302
BanI GGYRCC 3 cut(s) 1639, 1988, 2069
BanII GRGCYC 1 cut(s) 2422
BbsI GAAGAC 2 cut(s) 1101, 2143
Bbv12I GWGCWC 2 cut(s) 267, 2422
BbvI GCAGC 4 cut(s) 2017, 2111, 2114, 2259
BccI CCATC 7 cut(s) 587, 883, 931, 1081, 1736, 2540, 2541
BcgI CGANNNNNNTGC 2 cut(s) 1479, 1513
BciT130I CCWGG 5 cut(s) 409, 754, 2156, 2172, 2415
BciVI GTATCC 2 cut(s) 760, 934
BclI TGATCA 2 cut(s) 66, 1371
BcnI CCSGG 2 cut(s) 106, 334
BcoDI GTCTC 2 cut(s) 1148, 2500
BfaI CTAG 1 cut(s) 561
BfmI CTRYAG 1 cut(s) 1167
BfoI RGCGCY 1 cut(s) 806
BfuAI ACCTGC 4 cut(s) 78, 298, 1610, 1790
BfuI GTATCC 2 cut(s) 760, 934
BisI GCNGC 6 cut(s) 1185, 1992, 2031, 2100, 2103, 2273
BlsI GCNGC 6 cut(s) 1186, 1993, 2032, 2101, 2104, 2274
Bme1390I CCNGG 7 cut(s) 106, 334, 409, 754, 2156, 2172, 2415
Bme18I GGWCC 2 cut(s) 1977, 2191
BmeT110I CYCGRG 2 cut(s) 46, 2497
BmgT120I GGNCC 3 cut(s) 1711, 1977, 2191
BmiI GGNNCC 9 cut(s) 59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
BmrFI CCNGG 7 cut(s) 106, 334, 409, 754, 2156, 2172, 2415
BmsI GCATC 8 cut(s) 207, 412, 697, 1000, 1008, 1023, 1549, 1606
BoxI GACNNNNGTC 1 cut(s) 123
BpiI GAAGAC 2 cut(s) 1101, 2143
BpmI CTGGAG 3 cut(s) 452, 2072, 2436
Bpu14I TTCGAA 1 cut(s) 383
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 2 cut(s) 106, 334
BsaJI CCNNGG 2 cut(s) 793, 1862
BsaWI WCCGGW 1 cut(s) 2066
Bsc4I CCNNNNNNNGG 6 cut(s) 180, 799, 1649, 1971, 2200, 2332
Bse1I ACTGG 2 cut(s) 586, 2576
Bse3DI GCAATG 3 cut(s) 507, 1677, 1932
BseBI CCWGG 5 cut(s) 409, 754, 2156, 2172, 2415
BseDI CCNNGG 2 cut(s) 793, 1862
BseGI GGATG 4 cut(s) 598, 894, 942, 1023
BseLI CCNNNNNNNGG 6 cut(s) 180, 799, 1649, 1971, 2200, 2332
BseMI GCAATG 3 cut(s) 507, 1677, 1932
BseMII CTCAG 7 cut(s) 672, 815, 1626, 1635, 1750, 1980, 2049
BseNI ACTGG 2 cut(s) 586, 2576
BseXI GCAGC 4 cut(s) 2017, 2111, 2114, 2259
BseYI CCCAGC 2 cut(s) 298, 884
BsgI GTGCAG 1 cut(s) 497
Bsh1236I CGCG 1 cut(s) 1187
BshFI GGCC 3 cut(s) 541, 1302, 1712
BshNI GGYRCC 3 cut(s) 1639, 1988, 2069
BsiHKAI GWGCWC 2 cut(s) 267, 2422
BsiHKCI CYCGRG 2 cut(s) 46, 2497
BsiSI CCGG 4 cut(s) 106, 333, 1569, 2067
BslFI GGGAC 4 cut(s) 22, 1963, 2129, 2531
BslI CCNNNNNNNGG 6 cut(s) 180, 799, 1649, 1971, 2200, 2332
BsmAI GTCTC 2 cut(s) 1148, 2500
BsmFI GGGAC 4 cut(s) 22, 1963, 2129, 2531
BsmI GAATGC 6 cut(s) 460, 763, 1066, 1340, 1486, 2471
BsnI GGCC 3 cut(s) 541, 1302, 1712
BsoBI CYCGRG 2 cut(s) 46, 2497
Bsp119I TTCGAA 1 cut(s) 383
Bsp1286I GDGCHC 2 cut(s) 267, 2422
Bsp143I GATC 5 cut(s) 66, 114, 1371, 1891, 2014
Bsp19I CCATGG 1 cut(s) 793
BspACI CCGC 4 cut(s) 1182, 1185, 1992, 2411
BspANI GGCC 3 cut(s) 541, 1302, 1712
BspCNI CTCAG 7 cut(s) 671, 816, 1627, 1636, 1749, 1979, 2050
BspFNI CGCG 1 cut(s) 1187
BspHI TCATGA 1 cut(s) 211
BspLI GGNNCC 9 cut(s) 59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
BspMI ACCTGC 4 cut(s) 78, 298, 1610, 1790
BspT104I TTCGAA 1 cut(s) 383
BspT107I GGYRCC 3 cut(s) 1639, 1988, 2069
BsrDI GCAATG 3 cut(s) 507, 1677, 1932
BsrI ACTGG 2 cut(s) 586, 2576
BssECI CCNNGG 2 cut(s) 793, 1862
BssMI GATC 5 cut(s) 66, 114, 1371, 1891, 2014
BssT1I CCWWGG 2 cut(s) 793, 1862
Bst2UI CCWGG 5 cut(s) 409, 754, 2156, 2172, 2415
Bst4CI ACNGT 2 cut(s) 1171, 2372
Bst6I CTCTTC 2 cut(s) 595, 1479
BstAPI GCANNNNNTGC 2 cut(s) 1061, 1625
BstBI TTCGAA 1 cut(s) 383
BstDEI CTNAG 8 cut(s) 658, 824, 1635, 1644, 1736, 1966, 2044, 2058
BstDSI CCRYGG 1 cut(s) 793
BstEII GGTNACC 1 cut(s) 328
BstENI CCTNNNNNAGG 1 cut(s) 1647
BstF5I GGATG 4 cut(s) 598, 894, 942, 1023
BstFNI CGCG 1 cut(s) 1187
BstH2I RGCGCY 1 cut(s) 806
BstHHI GCGC 3 cut(s) 670, 805, 871
BstKTI GATC 5 cut(s) 69, 117, 1374, 1894, 2017
BstMAI GTCTC 2 cut(s) 1148, 2500
BstMBI GATC 5 cut(s) 66, 114, 1371, 1891, 2014
BstMWI GCNNNNNNNGC 9 cut(s) 152, 203, 304, 767, 875, 1061, 1516, 1625, 2359
BstNI CCWGG 5 cut(s) 409, 754, 2156, 2172, 2415
BstNSI RCATGY 5 cut(s) 104, 682, 1261, 1791, 2113
BstPAI GACNNNNGTC 1 cut(s) 123
BstPI GGTNACC 1 cut(s) 328
BstSCI CCNGG 7 cut(s) 104, 332, 407, 752, 2154, 2170, 2413
BstSFI CTRYAG 1 cut(s) 1167
BstUI CGCG 1 cut(s) 1187
BstV1I GCAGC 4 cut(s) 2017, 2111, 2114, 2259
BstV2I GAAGAC 2 cut(s) 1101, 2143
BsuI GTATCC 2 cut(s) 760, 934
BsuRI GGCC 3 cut(s) 541, 1302, 1712
BtgI CCRYGG 1 cut(s) 793
BtsCI GGATG 4 cut(s) 598, 894, 942, 1023
BtsI GCAGTG 2 cut(s) 1374, 2391
BtsIMutI CAGTG 3 cut(s) 1374, 2377, 2391
BveI ACCTGC 4 cut(s) 78, 298, 1610, 1790
CaiI CAGNNNCTG 1 cut(s) 2105
CciI TCATGA 1 cut(s) 211
CfoI GCGC 3 cut(s) 670, 805, 871
Cfr13I GGNCC 3 cut(s) 1711, 1977, 2191
CsiI ACCWGGT 1 cut(s) 2154
Csp6I GTAC 5 cut(s) 579, 1640, 2070, 2078, 2204
CviQI GTAC 5 cut(s) 579, 1640, 2070, 2078, 2204
DdeI CTNAG 8 cut(s) 658, 824, 1635, 1644, 1736, 1966, 2044, 2058
DpnI GATC 5 cut(s) 68, 116, 1373, 1893, 2016
DpnII GATC 5 cut(s) 66, 114, 1371, 1891, 2014
DrdI GACNNNNNNGTC 1 cut(s) 1162
DseDI GACNNNNNNGTC 1 cut(s) 1162
EaeI YGGCCR 1 cut(s) 1300
Eam1104I CTCTTC 2 cut(s) 595, 1479
EarI CTCTTC 2 cut(s) 595, 1479
EciI GGCGGA 2 cut(s) 1171, 2400
Ecl136II GAGCTC 1 cut(s) 2420
Eco130I CCWWGG 2 cut(s) 793, 1862
Eco147I AGGCCT 1 cut(s) 541
Eco24I GRGCYC 1 cut(s) 2422
Eco47I GGWCC 2 cut(s) 1977, 2191
Eco53kI GAGCTC 1 cut(s) 2420
Eco57I CTGAAG 4 cut(s) 1113, 1365, 1559, 1833
Eco88I CYCGRG 2 cut(s) 46, 2497
Eco91I GGTNACC 1 cut(s) 328
EcoICRI GAGCTC 1 cut(s) 2420
EcoNI CCTNNNNNAGG 1 cut(s) 1647
EcoO109I RGGNCCY 2 cut(s) 1711, 1977
EcoO65I GGTNACC 1 cut(s) 328
EcoRII CCWGG 5 cut(s) 407, 752, 2154, 2170, 2413
EcoT14I CCWWGG 2 cut(s) 793, 1862
EcoT22I ATGCAT 2 cut(s) 222, 1131
EcoT38I GRGCYC 1 cut(s) 2422
ErhI CCWWGG 2 cut(s) 793, 1862
FalI AAGNNNNNCTT 2 cut(s) 1395, 1427
FaqI GGGAC 4 cut(s) 22, 1963, 2129, 2531
FauNDI CATATG 3 cut(s) 958, 1288, 1504
FbaI TGATCA 2 cut(s) 66, 1371
FblI GTMKAC 1 cut(s) 1166
Fnu4HI GCNGC 6 cut(s) 1185, 1992, 2031, 2100, 2103, 2273
FokI GGATG 4 cut(s) 605, 901, 949, 1030
FriOI GRGCYC 1 cut(s) 2422
Fsp4HI GCNGC 6 cut(s) 1185, 1992, 2031, 2100, 2103, 2273
FspBI CTAG 1 cut(s) 561
GlaI GCGC 3 cut(s) 669, 804, 870
GluI GCNGC 6 cut(s) 1185, 1992, 2031, 2100, 2103, 2273
GsaI CCCAGC 2 cut(s) 302, 888
GsuI CTGGAG 3 cut(s) 452, 2072, 2436
HaeII RGCGCY 1 cut(s) 806
HaeIII GGCC 3 cut(s) 541, 1302, 1712
HapII CCGG 4 cut(s) 106, 333, 1569, 2067
HhaI GCGC 3 cut(s) 670, 805, 871
Hin6I GCGC 3 cut(s) 668, 803, 869
HinP1I GCGC 3 cut(s) 668, 803, 869
HincII GTYRAC 2 cut(s) 676, 1939
HindII GTYRAC 2 cut(s) 676, 1939
HindIII AAGCTT 3 cut(s) 632, 876, 2378
HpaII CCGG 4 cut(s) 106, 333, 1569, 2067
HphI GGTGA 1 cut(s) 2033
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 7 cut(s) 600, 1130, 1286, 1432, 1991, 2158, 2341
HpyCH4III ACNGT 2 cut(s) 1171, 2372
HpyCH4IV ACGT 1 cut(s) 2026
HpyF10VI GCNNNNNNNGC 9 cut(s) 152, 203, 304, 767, 875, 1061, 1516, 1625, 2359
HpyF3I CTNAG 8 cut(s) 658, 824, 1635, 1644, 1736, 1966, 2044, 2058
HpySE526I ACGT 1 cut(s) 2026
HspAI GCGC 3 cut(s) 668, 803, 869
KflI GGGWCCC 1 cut(s) 1977
KpnI GGTACC 2 cut(s) 1643, 2073
Ksp22I TGATCA 2 cut(s) 66, 1371
Kzo9I GATC 5 cut(s) 66, 114, 1371, 1891, 2014
LmnI GCTCC 6 cut(s) 1870, 1930, 2053, 2350, 2417, 2425
Lsp1109I GCAGC 4 cut(s) 2017, 2111, 2114, 2259
LweI GCATC 8 cut(s) 207, 412, 697, 1000, 1008, 1023, 1549, 1606
MabI ACCWGGT 1 cut(s) 2154
MaeI CTAG 1 cut(s) 561
MaeII ACGT 1 cut(s) 2026
MaeIII GTNAC 4 cut(s) 328, 1108, 1807, 2404
MalI GATC 5 cut(s) 68, 116, 1373, 1893, 2016
MboI GATC 5 cut(s) 66, 114, 1371, 1891, 2014
MhlI GDGCHC 2 cut(s) 267, 2422
MlsI TGGCCA 1 cut(s) 1302
MluNI TGGCCA 1 cut(s) 1302
MlyI GAGTC 3 cut(s) 38, 350, 1841
MmeI TCCRAC 2 cut(s) 949, 2162
Mox20I TGGCCA 1 cut(s) 1302
Mph1103I ATGCAT 2 cut(s) 222, 1131
MroXI GAANNNNTTC 3 cut(s) 1218, 1657, 2233
MscI TGGCCA 1 cut(s) 1302
MseI TTAA 7 cut(s) 20, 630, 873, 1026, 1413, 1584, 2444
MslI CAYNNNNRTG 5 cut(s) 1367, 1462, 1698, 2007, 2429
Msp20I TGGCCA 1 cut(s) 1302
MspA1I CMGCKG 1 cut(s) 2105
MspI CCGG 4 cut(s) 106, 333, 1569, 2067
MspR9I CCNGG 7 cut(s) 106, 334, 409, 754, 2156, 2172, 2415
Mva1269I GAATGC 6 cut(s) 460, 763, 1066, 1340, 1486, 2471
MvaI CCWGG 5 cut(s) 409, 754, 2156, 2172, 2415
MvnI CGCG 1 cut(s) 1187
MwoI GCNNNNNNNGC 9 cut(s) 152, 203, 304, 767, 875, 1061, 1516, 1625, 2359
NciI CCSGG 2 cut(s) 106, 334
NcoI CCATGG 1 cut(s) 793
NdeI CATATG 3 cut(s) 958, 1288, 1504
NdeII GATC 5 cut(s) 66, 114, 1371, 1891, 2014
NlaIV GGNNCC 9 cut(s) 59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
NmuCI GTSAC 1 cut(s) 2404
NsiI ATGCAT 2 cut(s) 222, 1131
NspI RCATGY 5 cut(s) 104, 682, 1261, 1791, 2113
NspV TTCGAA 1 cut(s) 383
PaeI GCATGC 2 cut(s) 104, 1791
PaeR7I CTCGAG 2 cut(s) 46, 2497
PagI TCATGA 1 cut(s) 211
PceI AGGCCT 1 cut(s) 541
PciI ACATGT 2 cut(s) 678, 1257
PcsI WCGNNNNNNNCGW 1 cut(s) 455
PctI GAATGC 6 cut(s) 460, 763, 1066, 1340, 1486, 2471
PdmI GAANNNNTTC 3 cut(s) 1218, 1657, 2233
PflMI CCANNNNNTGG 1 cut(s) 2332
PfoI TCCNGGA 2 cut(s) 407, 752
PkrI GCNGC 6 cut(s) 1186, 1993, 2032, 2101, 2104, 2274
PleI GAGTC 3 cut(s) 38, 349, 1840
PpsI GAGTC 3 cut(s) 38, 349, 1840
PpuMI RGGWCCY 1 cut(s) 1977
PscI ACATGT 2 cut(s) 678, 1257
PshAI GACNNNNGTC 1 cut(s) 123
PsiI TTATAA 1 cut(s) 1268
Psp124BI GAGCTC 1 cut(s) 2422
Psp5II RGGWCCY 1 cut(s) 1977
Psp6I CCWGG 5 cut(s) 407, 752, 2154, 2170, 2413
PspEI GGTNACC 1 cut(s) 328
PspFI CCCAGC 2 cut(s) 298, 884
PspGI CCWGG 5 cut(s) 407, 752, 2154, 2170, 2413
PspN4I GGNNCC 9 cut(s) 59, 1641, 1978, 1979, 1990, 2055, 2071, 2169, 2337
PspPI GGNCC 3 cut(s) 1711, 1977, 2191
PspPPI RGGWCCY 1 cut(s) 1977
PspXI VCTCGAGB 1 cut(s) 46
PstNI CAGNNNCTG 1 cut(s) 2105
PvuII CAGCTG 1 cut(s) 2105
RsaI GTAC 5 cut(s) 580, 1641, 2071, 2079, 2205
RsaNI GTAC 5 cut(s) 579, 1640, 2070, 2078, 2204
RseI CAYNNNNRTG 5 cut(s) 1367, 1462, 1698, 2007, 2429
SacI GAGCTC 1 cut(s) 2422
SaqAI TTAA 7 cut(s) 20, 630, 873, 1026, 1413, 1584, 2444
SatI GCNGC 6 cut(s) 1185, 1992, 2031, 2100, 2103, 2273
Sau3AI GATC 5 cut(s) 66, 114, 1371, 1891, 2014
Sau96I GGNCC 3 cut(s) 1711, 1977, 2191
SchI GAGTC 3 cut(s) 38, 350, 1841
ScrFI CCNGG 7 cut(s) 106, 334, 409, 754, 2156, 2172, 2415
SduI GDGCHC 2 cut(s) 267, 2422
SexAI ACCWGGT 1 cut(s) 2154
SfaNI GCATC 8 cut(s) 207, 412, 697, 1000, 1008, 1023, 1549, 1606
SfcI CTRYAG 1 cut(s) 1167
Sfr274I CTCGAG 2 cut(s) 46, 2497
SfuI TTCGAA 1 cut(s) 383
SinI GGWCC 2 cut(s) 1977, 2191
SlaI CTCGAG 2 cut(s) 46, 2497
SmiMI CAYNNNNRTG 5 cut(s) 1367, 1462, 1698, 2007, 2429
SmlI CTYRAG 3 cut(s) 46, 266, 2497
SmoI CTYRAG 3 cut(s) 46, 266, 2497
SphI GCATGC 2 cut(s) 104, 1791
SseBI AGGCCT 1 cut(s) 541
SsiI CCGC 4 cut(s) 1182, 1185, 1992, 2411
SspI AATATT 1 cut(s) 1826
SspMI CTAG 1 cut(s) 561
SstI GAGCTC 1 cut(s) 2422
StuI AGGCCT 1 cut(s) 541
StyD4I CCNGG 7 cut(s) 104, 332, 407, 752, 2154, 2170, 2413
StyI CCWWGG 2 cut(s) 793, 1862
TaaI ACNGT 2 cut(s) 1171, 2372
TaiI ACGT 1 cut(s) 2029
TaqI TCGA 5 cut(s) 47, 117, 383, 897, 2498
TatI WGTACW 2 cut(s) 578, 2077
TauI GCSGC 2 cut(s) 1187, 1994
Tru1I TTAA 7 cut(s) 20, 630, 873, 1026, 1413, 1584, 2444
Tru9I TTAA 7 cut(s) 20, 630, 873, 1026, 1413, 1584, 2444
TscAI CASTG 3 cut(s) 1381, 2377, 2391
TseFI GTSAC 1 cut(s) 2404
TseI GCWGC 4 cut(s) 2030, 2099, 2102, 2272
Tsp45I GTSAC 1 cut(s) 2404
TspGWI ACGGA 3 cut(s) 830, 1710, 2261
TspRI CASTG 3 cut(s) 1381, 2377, 2391
Van91I CCANNNNNTGG 1 cut(s) 2332
VpaK11BI GGWCC 2 cut(s) 1977, 2191
XagI CCTNNNNNAGG 1 cut(s) 1647
XapI RAATTY 5 cut(s) 612, 1323, 1492, 1573, 2440
XceI RCATGY 5 cut(s) 104, 682, 1261, 1791, 2113
XcmI CCANNNNNNNNNTGG 1 cut(s) 182
XhoI CTCGAG 2 cut(s) 46, 2497
XmiI GTMKAC 1 cut(s) 1166
XmnI GAANNNNTTC 3 cut(s) 1218, 1657, 2233
XspI CTAG 1 cut(s) 561
Zsp2I ATGCAT 2 cut(s) 222, 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.