RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g44280 |
| malus_domestica | MD11G1016300.v1.1 |
| prunus_persica | Prupe.6G014500_v2.0.a1 |
| pyrus_communis | pycom11g01150 |
| rosa_chinensis | RchiOBHm_Chr5g0080651 |
| rosa_laevigata | RLG00000036879 |
| rosa_multiflora | Rmu_sc0002380.1_g000007 Rmu_sc0039404.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00002750 |
| rosa_rugosa | Rorug05G0470900 |
| rosa_samantha | Rh5AG524200 Rh5BG546500 Rh5CG569700 Rh5DG556700 |
| rosa_wichuraiana | Rw5G048630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 4 cut(s) | 248, 492, 533, 2902 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1452, 1506 |
| AccBSI | CCGCTC | 1 cut(s) | 3127 |
| AccI | GTMKAC | 3 cut(s) | 216, 264, 1315 |
| AccII | CGCG | 2 cut(s) | 2691, 4468 |
| AccIII | TCCGGA | 1 cut(s) | 1974 |
| AcoI | YGGCCR | 6 cut(s) | 2686, 3112, 3726, 4496, 4753, 4829 |
| AcsI | RAATTY | 7 cut(s) | 2873, 2976, 3217, 4024, 4087, 4341, 4520 |
| AcuI | CTGAAG | 8 cut(s) | 110, 2282, 2468, 2604, 3560, 4322, 4334, 4354 |
| AcvI | CACGTG | 1 cut(s) | 3479 |
| AcyI | GRCGYC | 1 cut(s) | 249 |
| AfaI | GTAC | 6 cut(s) | 471, 1198, 2468, 2801, 3207, 4112 |
| AfeI | AGCGCT | 1 cut(s) | 3927 |
| AflIII | ACRYGT | 3 cut(s) | 1744, 3167, 3478 |
| AgeI | ACCGGT | 1 cut(s) | 98 |
| AhlI | ACTAGT | 1 cut(s) | 4733 |
| AjiI | CACGTC | 1 cut(s) | 1745 |
| AjnI | CCWGG | 8 cut(s) | 557, 637, 823, 1891, 2061, 2635, 3051, 3774 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1120, 1152 |
| Alw21I | GWGCWC | 6 cut(s) | 464, 1796, 2230, 4240, 4329, 4338 |
| Alw26I | GTCTC | 9 cut(s) | 681, 700, 1020, 1126, 1143, 2826, 3101, 4362, 4682 |
| Ama87I | CYCGRG | 1 cut(s) | 769 |
| Aor13HI | TCCGGA | 1 cut(s) | 1974 |
| Aor51HI | AGCGCT | 1 cut(s) | 3927 |
| ApoI | RAATTY | 7 cut(s) | 2873, 2976, 3217, 4024, 4087, 4341, 4520 |
| AsiGI | ACCGGT | 1 cut(s) | 98 |
| AspA2I | CCTAGG | 1 cut(s) | 602 |
| AspLEI | GCGC | 6 cut(s) | 251, 404, 420, 2693, 3928, 4470 |
| AsuC2I | CCSGG | 1 cut(s) | 253 |
| AsuII | TTCGAA | 1 cut(s) | 4674 |
| AsuNHI | GCTAGC | 2 cut(s) | 241, 1391 |
| AvaI | CYCGRG | 1 cut(s) | 769 |
| AvaII | GGWCC | 7 cut(s) | 38, 59, 101, 634, 1024, 2642, 3300 |
| AvrII | CCTAGG | 1 cut(s) | 602 |
| AxyI | CCTNAGG | 1 cut(s) | 3304 |
| BaeGI | GKGCMC | 1 cut(s) | 538 |
| BalI | TGGCCA | 4 cut(s) | 3114, 3728, 4755, 4831 |
| BamHI | GGATCC | 1 cut(s) | 3317 |
| BanI | GGYRCC | 4 cut(s) | 248, 492, 533, 2902 |
| BanII | GRGCYC | 3 cut(s) | 625, 667, 1796 |
| BauI | CACGAG | 2 cut(s) | 457, 624 |
| BbrPI | CACGTG | 1 cut(s) | 3479 |
| BbsI | GAAGAC | 5 cut(s) | 153, 386, 2727, 4047, 4655 |
| Bbv12I | GWGCWC | 6 cut(s) | 464, 1796, 2230, 4240, 4329, 4338 |
| BbvCI | CCTCAGC | 1 cut(s) | 2097 |
| BceAI | ACGGC | 3 cut(s) | 389, 4759, 4824 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2320, 2354, 3897, 3931 |
| BciT130I | CCWGG | 8 cut(s) | 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| BciVI | GTATCC | 2 cut(s) | 505, 4127 |
| BclI | TGATCA | 2 cut(s) | 2020, 2398 |
| BcnI | CCSGG | 1 cut(s) | 253 |
| BcoDI | GTCTC | 9 cut(s) | 681, 700, 1020, 1126, 1143, 2826, 3101, 4362, 4682 |
| BcuI | ACTAGT | 1 cut(s) | 4733 |
| BfmI | CTRYAG | 6 cut(s) | 82, 193, 841, 4218, 4433, 4853 |
| BfoI | RGCGCY | 3 cut(s) | 252, 405, 3929 |
| BfuI | GTATCC | 2 cut(s) | 505, 4127 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3140 |
| BglII | AGATCT | 1 cut(s) | 2119 |
| BlnI | CCTAGG | 1 cut(s) | 602 |
| Bme1390I | CCNGG | 9 cut(s) | 253, 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| Bme18I | GGWCC | 7 cut(s) | 38, 59, 101, 634, 1024, 2642, 3300 |
| BmeT110I | CYCGRG | 1 cut(s) | 769 |
| BmgBI | CACGTC | 1 cut(s) | 1745 |
| BmrFI | CCNGG | 9 cut(s) | 253, 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| BmsI | GCATC | 8 cut(s) | 1019, 2296, 2413, 2665, 3413, 3505, 3555, 3850 |
| BmtI | GCTAGC | 2 cut(s) | 245, 1395 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1491 |
| BpiI | GAAGAC | 5 cut(s) | 153, 386, 2727, 4047, 4655 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1242, 1274 |
| BpmI | CTGGAG | 2 cut(s) | 164, 1040 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2097, 2907 |
| Bpu14I | TTCGAA | 1 cut(s) | 4674 |
| BpuEI | CTTGAG | 3 cut(s) | 733, 812, 3810 |
| BpuMI | CCSGG | 1 cut(s) | 253 |
| BsaAI | YACGTR | 1 cut(s) | 3479 |
| BsaBI | GATNNNNATC | 3 cut(s) | 516, 1185, 2191 |
| BsaHI | GRCGYC | 1 cut(s) | 249 |
| BsaI | GGTCTC | 1 cut(s) | 700 |
| BsaWI | WCCGGW | 3 cut(s) | 35, 98, 1974 |
| Bse118I | RCCGGY | 4 cut(s) | 98, 245, 4447, 4494 |
| Bse21I | CCTNAGG | 1 cut(s) | 3304 |
| Bse3DI | GCAATG | 3 cut(s) | 486, 2079, 2094 |
| Bse8I | GATNNNNATC | 3 cut(s) | 516, 1185, 2191 |
| BseAI | TCCGGA | 1 cut(s) | 1974 |
| BseBI | CCWGG | 8 cut(s) | 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| BseGI | GGATG | 9 cut(s) | 241, 315, 316, 1876, 3428, 3717, 4081, 4209, 4720 |
| BseJI | GATNNNNATC | 3 cut(s) | 516, 1185, 2191 |
| BseMI | GCAATG | 3 cut(s) | 486, 2079, 2094 |
| BseMII | CTCAG | 6 cut(s) | 1548, 2031, 2088, 2254, 2898, 3318 |
| BseRI | GAGGAG | 6 cut(s) | 1183, 1250, 1712, 1979, 1982, 2114 |
| BseSI | GKGCMC | 1 cut(s) | 538 |
| BseYI | CCCAGC | 1 cut(s) | 104 |
| BsgI | GTGCAG | 3 cut(s) | 893, 2844, 4408 |
| Bsh1236I | CGCG | 2 cut(s) | 2691, 4468 |
| Bsh1285I | CGRYCG | 3 cut(s) | 36, 99, 323 |
| BshNI | GGYRCC | 4 cut(s) | 248, 492, 533, 2902 |
| BshTI | ACCGGT | 1 cut(s) | 98 |
| BsiEI | CGRYCG | 3 cut(s) | 36, 99, 323 |
| BsiHKAI | GWGCWC | 6 cut(s) | 464, 1796, 2230, 4240, 4329, 4338 |
| BsiHKCI | CYCGRG | 1 cut(s) | 769 |
| BslFI | GGGAC | 6 cut(s) | 87, 647, 1257, 2366, 2503, 3313 |
| BsmAI | GTCTC | 9 cut(s) | 681, 700, 1020, 1126, 1143, 2826, 3101, 4362, 4682 |
| BsmBI | CGTCTC | 1 cut(s) | 1020 |
| BsmFI | GGGAC | 6 cut(s) | 87, 647, 1257, 2366, 2503, 3313 |
| BsmI | GAATGC | 2 cut(s) | 2550, 3948 |
| Bso31I | GGTCTC | 1 cut(s) | 700 |
| BsoBI | CYCGRG | 1 cut(s) | 769 |
| Bsp119I | TTCGAA | 1 cut(s) | 4674 |
| Bsp1286I | GDGCHC | 9 cut(s) | 464, 538, 625, 667, 1796, 2230, 4240, 4329, 4338 |
| Bsp13I | TCCGGA | 1 cut(s) | 1974 |
| Bsp1407I | TGTACA | 1 cut(s) | 2466 |
| BspCNI | CTCAG | 6 cut(s) | 1549, 2032, 2089, 2253, 2899, 3317 |
| BspEI | TCCGGA | 1 cut(s) | 1974 |
| BspFNI | CGCG | 2 cut(s) | 2691, 4468 |
| BspHI | TCATGA | 1 cut(s) | 1798 |
| BspMAI | CTGCAG | 1 cut(s) | 4222 |
| BspOI | GCTAGC | 2 cut(s) | 245, 1395 |
| BspQI | GCTCTTC | 2 cut(s) | 2025, 2122 |
| BspT104I | TTCGAA | 1 cut(s) | 4674 |
| BspT107I | GGYRCC | 4 cut(s) | 248, 492, 533, 2902 |
| BspTNI | GGTCTC | 1 cut(s) | 700 |
| BsrBI | CCGCTC | 1 cut(s) | 3127 |
| BsrDI | GCAATG | 3 cut(s) | 486, 2079, 2094 |
| BsrFI | RCCGGY | 4 cut(s) | 98, 245, 4447, 4494 |
| BsrGI | TGTACA | 1 cut(s) | 2466 |
| BssAI | RCCGGY | 4 cut(s) | 98, 245, 4447, 4494 |
| BssNI | GRCGYC | 1 cut(s) | 249 |
| BssSI | CACGAG | 2 cut(s) | 457, 624 |
| BssT1I | CCWWGG | 5 cut(s) | 602, 750, 2438, 4129, 4588 |
| Bst2BI | CACGAG | 2 cut(s) | 457, 624 |
| Bst2UI | CCWGG | 8 cut(s) | 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| Bst6I | CTCTTC | 9 cut(s) | 180, 885, 1264, 1466, 2025, 2122, 2586, 3462, 3635 |
| BstACI | GRCGYC | 1 cut(s) | 249 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2093, 2293, 3494, 3860 |
| BstAUI | TGTACA | 1 cut(s) | 2466 |
| BstBAI | YACGTR | 1 cut(s) | 3479 |
| BstBI | TTCGAA | 1 cut(s) | 4674 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3177 |
| BstF5I | GGATG | 9 cut(s) | 241, 315, 316, 1876, 3428, 3717, 4081, 4209, 4720 |
| BstFNI | CGCG | 2 cut(s) | 2691, 4468 |
| BstH2I | RGCGCY | 3 cut(s) | 252, 405, 3929 |
| BstHHI | GCGC | 6 cut(s) | 251, 404, 420, 2693, 3928, 4470 |
| BstMAI | GTCTC | 9 cut(s) | 681, 700, 1020, 1126, 1143, 2826, 3101, 4362, 4682 |
| BstMCI | CGRYCG | 3 cut(s) | 36, 99, 323 |
| BstNI | CCWGG | 8 cut(s) | 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| BstNSI | RCATGY | 3 cut(s) | 2039, 3171, 3501 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1491 |
| BstSCI | CCNGG | 9 cut(s) | 251, 557, 637, 823, 1891, 2061, 2635, 3051, 3774 |
| BstSFI | CTRYAG | 6 cut(s) | 82, 193, 841, 4218, 4433, 4853 |
| BstSLI | GKGCMC | 1 cut(s) | 538 |
| BstUI | CGCG | 2 cut(s) | 2691, 4468 |
| BstV2I | GAAGAC | 5 cut(s) | 153, 386, 2727, 4047, 4655 |
| BstX2I | RGATCY | 3 cut(s) | 2119, 3091, 3317 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1739 |
| BstYI | RGATCY | 3 cut(s) | 2119, 3091, 3317 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3304 |
| BsuI | GTATCC | 2 cut(s) | 505, 4127 |
| BtgZI | GCGATG | 1 cut(s) | 1236 |
| BtrI | CACGTC | 1 cut(s) | 1745 |
| BtsCI | GGATG | 9 cut(s) | 241, 315, 316, 1876, 3428, 3717, 4081, 4209, 4720 |
| BtsI | GCAGTG | 4 cut(s) | 876, 2685, 3615, 4215 |
| CciI | TCATGA | 1 cut(s) | 1798 |
| CfoI | GCGC | 6 cut(s) | 251, 404, 420, 2693, 3928, 4470 |
| Cfr10I | RCCGGY | 4 cut(s) | 98, 245, 4447, 4494 |
| CpoI | CGGWCCG | 2 cut(s) | 38, 2642 |
| CseI | GACGC | 2 cut(s) | 122, 4494 |
| CsiI | ACCWGGT | 1 cut(s) | 1891 |
| Csp6I | GTAC | 6 cut(s) | 470, 1197, 2467, 2800, 3206, 4111 |
| CspAI | ACCGGT | 1 cut(s) | 98 |
| CspI | CGGWCCG | 2 cut(s) | 38, 2642 |
| CviQI | GTAC | 6 cut(s) | 470, 1197, 2467, 2800, 3206, 4111 |
| DinI | GGCGCC | 1 cut(s) | 250 |
| DraI | TTTAAA | 3 cut(s) | 1362, 1416, 2385 |
| EaeI | YGGCCR | 6 cut(s) | 2686, 3112, 3726, 4496, 4753, 4829 |
| Eam1104I | CTCTTC | 9 cut(s) | 180, 885, 1264, 1466, 2025, 2122, 2586, 3462, 3635 |
| EarI | CTCTTC | 9 cut(s) | 180, 885, 1264, 1466, 2025, 2122, 2586, 3462, 3635 |
| EciI | GGCGGA | 2 cut(s) | 141, 4826 |
| Ecl136II | GAGCTC | 1 cut(s) | 1794 |
| Eco130I | CCWWGG | 5 cut(s) | 602, 750, 2438, 4129, 4588 |
| Eco147I | AGGCCT | 1 cut(s) | 607 |
| Eco24I | GRGCYC | 3 cut(s) | 625, 667, 1796 |
| Eco31I | GGTCTC | 1 cut(s) | 700 |
| Eco32I | GATATC | 1 cut(s) | 996 |
| Eco47I | GGWCC | 7 cut(s) | 38, 59, 101, 634, 1024, 2642, 3300 |
| Eco47III | AGCGCT | 1 cut(s) | 3927 |
| Eco53kI | GAGCTC | 1 cut(s) | 1794 |
| Eco57I | CTGAAG | 8 cut(s) | 110, 2282, 2468, 2604, 3560, 4322, 4334, 4354 |
| Eco72I | CACGTG | 1 cut(s) | 3479 |
| Eco81I | CCTNAGG | 1 cut(s) | 3304 |
| Eco88I | CYCGRG | 1 cut(s) | 769 |
| EcoICRI | GAGCTC | 1 cut(s) | 1794 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3177 |
| EcoO109I | RGGNCCY | 6 cut(s) | 59, 634, 1024, 3300, 3771, 4623 |
| EcoRI | GAATTC | 2 cut(s) | 2873, 4024 |
| EcoRII | CCWGG | 8 cut(s) | 557, 637, 823, 1891, 2061, 2635, 3051, 3774 |
| EcoRV | GATATC | 1 cut(s) | 996 |
| EcoT14I | CCWWGG | 5 cut(s) | 602, 750, 2438, 4129, 4588 |
| EcoT22I | ATGCAT | 1 cut(s) | 3948 |
| EcoT38I | GRGCYC | 3 cut(s) | 625, 667, 1796 |
| EgeI | GGCGCC | 1 cut(s) | 250 |
| EheI | GGCGCC | 1 cut(s) | 250 |
| ErhI | CCWWGG | 5 cut(s) | 602, 750, 2438, 4129, 4588 |
| Esp3I | CGTCTC | 1 cut(s) | 1020 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2119, 2151, 3915, 3947 |
| FaqI | GGGAC | 6 cut(s) | 87, 647, 1257, 2366, 2503, 3313 |
| FauI | CCCGC | 1 cut(s) | 1334 |
| FauNDI | CATATG | 1 cut(s) | 1005 |
| FbaI | TGATCA | 2 cut(s) | 2020, 2398 |
| FblI | GTMKAC | 3 cut(s) | 216, 264, 1315 |
| FokI | GGATG | 9 cut(s) | 248, 302, 323, 1863, 3435, 3724, 4088, 4216, 4727 |
| FriOI | GRGCYC | 3 cut(s) | 625, 667, 1796 |
| FseI | GGCCGGCC | 1 cut(s) | 4498 |
| GlaI | GCGC | 6 cut(s) | 250, 403, 419, 2692, 3927, 4469 |
| GsaI | CCCAGC | 1 cut(s) | 108 |
| GsuI | CTGGAG | 2 cut(s) | 164, 1040 |
| HaeII | RGCGCY | 3 cut(s) | 252, 405, 3929 |
| HgaI | GACGC | 2 cut(s) | 122, 4494 |
| HhaI | GCGC | 6 cut(s) | 251, 404, 420, 2693, 3928, 4470 |
| Hin1I | GRCGYC | 1 cut(s) | 249 |
| Hin6I | GCGC | 6 cut(s) | 249, 402, 418, 2691, 3926, 4468 |
| HinP1I | GCGC | 6 cut(s) | 249, 402, 418, 2691, 3926, 4468 |
| HincII | GTYRAC | 6 cut(s) | 217, 265, 1765, 2163, 3592, 4033 |
| HindII | GTYRAC | 6 cut(s) | 217, 265, 1765, 2163, 3592, 4033 |
| HindIII | AAGCTT | 3 cut(s) | 2450, 2740, 3186 |
| HpaI | GTTAAC | 2 cut(s) | 1765, 3592 |
| Hpy99I | CGWCG | 5 cut(s) | 116, 221, 269, 4488, 4745 |
| HpyCH4IV | ACGT | 4 cut(s) | 731, 1744, 3478, 4329 |
| HpySE526I | ACGT | 4 cut(s) | 731, 1744, 3478, 4329 |
| Hsp92I | GRCGYC | 1 cut(s) | 249 |
| HspAI | GCGC | 6 cut(s) | 249, 402, 418, 2691, 3926, 4468 |
| KasI | GGCGCC | 1 cut(s) | 248 |
| KflI | GGGWCCC | 1 cut(s) | 634 |
| Kpn2I | TCCGGA | 1 cut(s) | 1974 |
| KroI | GCCGGC | 2 cut(s) | 245, 4494 |
| KroNI | GCCGGC | 2 cut(s) | 247, 4496 |
| Ksp22I | TGATCA | 2 cut(s) | 2020, 2398 |
| KspAI | GTTAAC | 2 cut(s) | 1765, 3592 |
| LguI | GCTCTTC | 2 cut(s) | 2025, 2122 |
| LmnI | GCTCC | 5 cut(s) | 328, 399, 773, 3568, 4275 |
| LweI | GCATC | 8 cut(s) | 1019, 2296, 2413, 2665, 3413, 3505, 3555, 3850 |
| MabI | ACCWGGT | 1 cut(s) | 1891 |
| MaeII | ACGT | 4 cut(s) | 731, 1744, 3478, 4329 |
| MbiI | CCGCTC | 1 cut(s) | 3127 |
| MflI | RGATCY | 3 cut(s) | 2119, 3091, 3317 |
| MhlI | GDGCHC | 9 cut(s) | 464, 538, 625, 667, 1796, 2230, 4240, 4329, 4338 |
| MlsI | TGGCCA | 4 cut(s) | 3114, 3728, 4755, 4831 |
| MluNI | TGGCCA | 4 cut(s) | 3114, 3728, 4755, 4831 |
| Mly113I | GGCGCC | 1 cut(s) | 249 |
| MlyI | GAGTC | 4 cut(s) | 683, 2111, 2477, 3094 |
| MmeI | TCCRAC | 5 cut(s) | 56, 119, 2966, 3227, 3295 |
| Mox20I | TGGCCA | 4 cut(s) | 3114, 3728, 4755, 4831 |
| Mph1103I | ATGCAT | 1 cut(s) | 3948 |
| MroI | TCCGGA | 1 cut(s) | 1974 |
| MroNI | GCCGGC | 2 cut(s) | 245, 4494 |
| MscI | TGGCCA | 4 cut(s) | 3114, 3728, 4755, 4831 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1446, 1500 |
| Msp20I | TGGCCA | 4 cut(s) | 3114, 3728, 4755, 4831 |
| MspR9I | CCNGG | 9 cut(s) | 253, 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| Mva1269I | GAATGC | 2 cut(s) | 2550, 3948 |
| MvaI | CCWGG | 8 cut(s) | 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| MvnI | CGCG | 2 cut(s) | 2691, 4468 |
| NaeI | GCCGGC | 2 cut(s) | 247, 4496 |
| NarI | GGCGCC | 1 cut(s) | 249 |
| NciI | CCSGG | 1 cut(s) | 253 |
| NdeI | CATATG | 1 cut(s) | 1005 |
| NgoMIV | GCCGGC | 2 cut(s) | 245, 4494 |
| NheI | GCTAGC | 2 cut(s) | 241, 1391 |
| NmeAIII | GCCGAG | 1 cut(s) | 4259 |
| NmuCI | GTSAC | 5 cut(s) | 2951, 3097, 3175, 4058, 4513 |
| NsiI | ATGCAT | 1 cut(s) | 3948 |
| NspI | RCATGY | 3 cut(s) | 2039, 3171, 3501 |
| NspV | TTCGAA | 1 cut(s) | 4674 |
| PaeI | GCATGC | 1 cut(s) | 2039 |
| PagI | TCATGA | 1 cut(s) | 1798 |
| PceI | AGGCCT | 1 cut(s) | 607 |
| PciI | ACATGT | 1 cut(s) | 3167 |
| PciSI | GCTCTTC | 2 cut(s) | 2025, 2122 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 216, 264 |
| PctI | GAATGC | 2 cut(s) | 2550, 3948 |
| PdiI | GCCGGC | 2 cut(s) | 247, 4496 |
| PflFI | GACNNNGTC | 1 cut(s) | 692 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1452, 1506 |
| PinAI | ACCGGT | 1 cut(s) | 98 |
| Ple19I | CGATCG | 1 cut(s) | 323 |
| PleI | GAGTC | 4 cut(s) | 683, 2110, 2477, 3094 |
| PluTI | GGCGCC | 1 cut(s) | 252 |
| PmaCI | CACGTG | 1 cut(s) | 3479 |
| PmlI | CACGTG | 1 cut(s) | 3479 |
| PpsI | GAGTC | 4 cut(s) | 683, 2110, 2477, 3094 |
| Ppu21I | YACGTR | 1 cut(s) | 3479 |
| PpuMI | RGGWCCY | 4 cut(s) | 59, 634, 1024, 3300 |
| PscI | ACATGT | 1 cut(s) | 3167 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1491 |
| Psp124BI | GAGCTC | 1 cut(s) | 1796 |
| Psp5II | RGGWCCY | 4 cut(s) | 59, 634, 1024, 3300 |
| Psp6I | CCWGG | 8 cut(s) | 557, 637, 823, 1891, 2061, 2635, 3051, 3774 |
| PspCI | CACGTG | 1 cut(s) | 3479 |
| PspFI | CCCAGC | 1 cut(s) | 104 |
| PspGI | CCWGG | 8 cut(s) | 557, 637, 823, 1891, 2061, 2635, 3051, 3774 |
| PspPPI | RGGWCCY | 4 cut(s) | 59, 634, 1024, 3300 |
| PstI | CTGCAG | 1 cut(s) | 4222 |
| PsuI | RGATCY | 3 cut(s) | 2119, 3091, 3317 |
| PsyI | GACNNNGTC | 1 cut(s) | 692 |
| PvuI | CGATCG | 1 cut(s) | 323 |
| RigI | GGCCGGCC | 1 cut(s) | 4498 |
| RsaI | GTAC | 6 cut(s) | 471, 1198, 2468, 2801, 3207, 4112 |
| RsaNI | GTAC | 6 cut(s) | 470, 1197, 2467, 2800, 3206, 4111 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1446, 1500 |
| Rsr2I | CGGWCCG | 2 cut(s) | 38, 2642 |
| RsrII | CGGWCCG | 2 cut(s) | 38, 2642 |
| SacI | GAGCTC | 1 cut(s) | 1796 |
| SalI | GTCGAC | 2 cut(s) | 215, 263 |
| SapI | GCTCTTC | 2 cut(s) | 2025, 2122 |
| SchI | GAGTC | 4 cut(s) | 683, 2111, 2477, 3094 |
| ScrFI | CCNGG | 9 cut(s) | 253, 559, 639, 825, 1893, 2063, 2637, 3053, 3776 |
| SduI | GDGCHC | 9 cut(s) | 464, 538, 625, 667, 1796, 2230, 4240, 4329, 4338 |
| SexAI | ACCWGGT | 1 cut(s) | 1891 |
| SfaNI | GCATC | 8 cut(s) | 1019, 2296, 2413, 2665, 3413, 3505, 3555, 3850 |
| SfcI | CTRYAG | 6 cut(s) | 82, 193, 841, 4218, 4433, 4853 |
| SfoI | GGCGCC | 1 cut(s) | 250 |
| SfuI | TTCGAA | 1 cut(s) | 4674 |
| SinI | GGWCC | 7 cut(s) | 38, 59, 101, 634, 1024, 2642, 3300 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1446, 1500 |
| SmlI | CTYRAG | 3 cut(s) | 712, 791, 3825 |
| SmoI | CTYRAG | 3 cut(s) | 712, 791, 3825 |
| SpeI | ACTAGT | 1 cut(s) | 4733 |
| SphI | GCATGC | 1 cut(s) | 2039 |
| SseBI | AGGCCT | 1 cut(s) | 607 |
| SspDI | GGCGCC | 1 cut(s) | 248 |
| SspI | AATATT | 2 cut(s) | 1640, 4100 |
| SstI | GAGCTC | 1 cut(s) | 1796 |
| StuI | AGGCCT | 1 cut(s) | 607 |
| StyD4I | CCNGG | 9 cut(s) | 251, 557, 637, 823, 1891, 2061, 2635, 3051, 3774 |
| StyI | CCWWGG | 5 cut(s) | 602, 750, 2438, 4129, 4588 |
| TaiI | ACGT | 4 cut(s) | 734, 1747, 3481, 4332 |
| TaqII | GACCGA | 1 cut(s) | 682 |
| TatI | WGTACW | 2 cut(s) | 469, 2466 |
| TauI | GCSGC | 3 cut(s) | 479, 1851, 2691 |
| TseFI | GTSAC | 5 cut(s) | 2951, 3097, 3175, 4058, 4513 |
| Tsp45I | GTSAC | 5 cut(s) | 2951, 3097, 3175, 4058, 4513 |
| TspGWI | ACGGA | 3 cut(s) | 2199, 2548, 4152 |
| Tth111I | GACNNNGTC | 1 cut(s) | 692 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1452, 1506 |
| VpaK11BI | GGWCC | 7 cut(s) | 38, 59, 101, 634, 1024, 2642, 3300 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3177 |
| XapI | RAATTY | 7 cut(s) | 2873, 2976, 3217, 4024, 4087, 4341, 4520 |
| XbaI | TCTAGA | 2 cut(s) | 2981, 3103 |
| XceI | RCATGY | 3 cut(s) | 2039, 3171, 3501 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 4506, 4586 |
| XmaJI | CCTAGG | 1 cut(s) | 602 |
| XmiI | GTMKAC | 3 cut(s) | 216, 264, 1315 |
| Zsp2I | ATGCAT | 1 cut(s) | 3948 |