RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g44280 |
| malus_domestica | MD11G1016300.v1.1 |
| prunus_persica | Prupe.6G014500_v2.0.a1 |
| pyrus_communis | pycom11g01150 |
| rosa_chinensis | RchiOBHm_Chr5g0080651 |
| rosa_laevigata | RLG00000036879 |
| rosa_multiflora | Rmu_sc0002380.1_g000007 Rmu_sc0039404.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00002750 |
| rosa_rugosa | Rorug05G0470900 |
| rosa_samantha | Rh5AG524200 Rh5BG546500 Rh5CG569700 Rh5DG556700 |
| rosa_wichuraiana | Rw5G048630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 862 |
| AccB1I | GGYRCC | 1 cut(s) | 1864 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 423, 477 |
| AccBSI | CCGCTC | 1 cut(s) | 2236 |
| AccI | GTMKAC | 1 cut(s) | 286 |
| AccII | CGCG | 1 cut(s) | 1653 |
| AccIII | TCCGGA | 1 cut(s) | 936 |
| AciI | CCGC | 7 cut(s) | 312, 811, 1602, 1607, 1651, 2236, 2868 |
| AclWI | GGATC | 6 cut(s) | 268, 522, 1895, 2195, 2421, 2434 |
| AcoI | YGGCCR | 4 cut(s) | 1648, 2221, 2814, 2865 |
| AcsI | RAATTY | 7 cut(s) | 1835, 1938, 2044, 3112, 3175, 3280, 3429 |
| AcvI | CACGTG | 1 cut(s) | 2588 |
| AfaI | GTAC | 5 cut(s) | 190, 1430, 1763, 2316, 3200 |
| AfeI | AGCGCT | 1 cut(s) | 3015 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 423, 477, 1207, 1766, 2183, 2235, 2288, 2856, 3477 |
| AflIII | ACRYGT | 2 cut(s) | 2276, 2587 |
| AjnI | CCWGG | 4 cut(s) | 1023, 1597, 2160, 2862 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 115, 147 |
| Alw21I | GWGCWC | 5 cut(s) | 758, 1192, 3328, 3417, 3426 |
| Alw26I | GTCTC | 6 cut(s) | 15, 121, 1788, 1887, 2210, 3450 |
| AlwI | GGATC | 6 cut(s) | 268, 522, 1895, 2195, 2421, 2434 |
| Aor13HI | TCCGGA | 1 cut(s) | 936 |
| Aor51HI | AGCGCT | 1 cut(s) | 3015 |
| AoxI | GGCC | 8 cut(s) | 95, 879, 1397, 1648, 2221, 2814, 2858, 2865 |
| ApeKI | GCWGC | 9 cut(s) | 813, 1055, 1102, 2467, 2594, 2652, 2680, 2973, 3006 |
| ApoI | RAATTY | 7 cut(s) | 1835, 1938, 2044, 3112, 3175, 3280, 3429 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1093, 2143 |
| AspLEI | GCGC | 2 cut(s) | 1655, 3016 |
| AspS9I | GGNCC | 5 cut(s) | 19, 1397, 1604, 2409, 2859 |
| AsuHPI | GGTGA | 8 cut(s) | 95, 209, 224, 1266, 1781, 1946, 2815, 3116 |
| AsuII | TTCGAA | 1 cut(s) | 2042 |
| AsuNHI | GCTAGC | 1 cut(s) | 362 |
| AvaII | GGWCC | 3 cut(s) | 19, 1604, 2409 |
| AxyI | CCTNAGG | 1 cut(s) | 2413 |
| BalI | TGGCCA | 2 cut(s) | 2223, 2816 |
| BamHI | GGATCC | 1 cut(s) | 2426 |
| BanI | GGYRCC | 1 cut(s) | 1864 |
| BanII | GRGCYC | 1 cut(s) | 758 |
| BauI | CACGAG | 1 cut(s) | 2672 |
| BbrPI | CACGTG | 1 cut(s) | 2588 |
| BbsI | GAAGAC | 3 cut(s) | 77, 1689, 3135 |
| Bbv12I | GWGCWC | 5 cut(s) | 758, 1192, 3328, 3417, 3426 |
| BbvCI | CCTCAGC | 1 cut(s) | 1059 |
| BbvI | GCAGC | 9 cut(s) | 825, 1042, 1114, 2479, 2606, 2664, 2667, 2985, 2993 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1282, 1316, 2985, 3019 |
| BciT130I | CCWGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| BclI | TGATCA | 2 cut(s) | 982, 1360 |
| BcoDI | GTCTC | 6 cut(s) | 15, 121, 1788, 1887, 2210, 3450 |
| BfmI | CTRYAG | 2 cut(s) | 3306, 3521 |
| BfoI | RGCGCY | 1 cut(s) | 3017 |
| BfuAI | ACCTGC | 1 cut(s) | 862 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2249 |
| BglII | AGATCT | 1 cut(s) | 1081 |
| Bme1390I | CCNGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| Bme18I | GGWCC | 3 cut(s) | 19, 1604, 2409 |
| BmgT120I | GGNCC | 5 cut(s) | 19, 1397, 1604, 2409, 2859 |
| BmiI | GGNNCC | 4 cut(s) | 1866, 2410, 2428, 2861 |
| BmrFI | CCNGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| BmsI | GCATC | 8 cut(s) | 1375, 1627, 1959, 2066, 2522, 2614, 2664, 2938 |
| BmtI | GCTAGC | 1 cut(s) | 366 |
| BoxI | GACNNNNGTC | 1 cut(s) | 462 |
| BpiI | GAAGAC | 3 cut(s) | 77, 1689, 3135 |
| BpmI | CTGGAG | 1 cut(s) | 35 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1059, 1869 |
| Bpu14I | TTCGAA | 1 cut(s) | 2042 |
| BpuEI | CTTGAG | 2 cut(s) | 100, 2898 |
| BsaAI | YACGTR | 1 cut(s) | 2588 |
| BsaBI | GATNNNNATC | 3 cut(s) | 177, 1153, 3157 |
| BsaJI | CCNNGG | 4 cut(s) | 882, 1400, 2160, 2862 |
| BsaWI | WCCGGW | 1 cut(s) | 936 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 423, 477, 1207, 1766, 2183, 2235, 2288, 2856, 3477 |
| Bse1I | ACTGG | 8 cut(s) | 417, 471, 622, 2067, 2084, 2204, 2224, 2785 |
| Bse21I | CCTNAGG | 1 cut(s) | 2413 |
| Bse3DI | GCAATG | 2 cut(s) | 1041, 1056 |
| Bse8I | GATNNNNATC | 3 cut(s) | 177, 1153, 3157 |
| BseAI | TCCGGA | 1 cut(s) | 936 |
| BseBI | CCWGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| BseDI | CCNNGG | 4 cut(s) | 882, 1400, 2160, 2862 |
| BseGI | GGATG | 7 cut(s) | 838, 1150, 1521, 2537, 2805, 3169, 3297 |
| BseJI | GATNNNNATC | 3 cut(s) | 177, 1153, 3157 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 423, 477, 1207, 1766, 2183, 2235, 2288, 2856, 3477 |
| BseMI | GCAATG | 2 cut(s) | 1041, 1056 |
| BseMII | CTCAG | 8 cut(s) | 519, 953, 993, 1050, 1216, 1829, 1860, 2427 |
| BseNI | ACTGG | 8 cut(s) | 417, 471, 622, 2067, 2084, 2204, 2224, 2785 |
| BseRI | GAGGAG | 4 cut(s) | 683, 941, 944, 1076 |
| BseXI | GCAGC | 9 cut(s) | 825, 1042, 1114, 2479, 2606, 2664, 2667, 2985, 2993 |
| BsgI | GTGCAG | 2 cut(s) | 1806, 3496 |
| Bsh1236I | CGCG | 1 cut(s) | 1653 |
| BshFI | GGCC | 8 cut(s) | 97, 881, 1399, 1650, 2223, 2816, 2860, 2867 |
| BshNI | GGYRCC | 1 cut(s) | 1864 |
| BsiHKAI | GWGCWC | 5 cut(s) | 758, 1192, 3328, 3417, 3426 |
| BsiSI | CCGG | 2 cut(s) | 521, 937 |
| BslFI | GGGAC | 4 cut(s) | 249, 1328, 1465, 2422 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 423, 477, 1207, 1766, 2183, 2235, 2288, 2856, 3477 |
| BsmAI | GTCTC | 6 cut(s) | 15, 121, 1788, 1887, 2210, 3450 |
| BsmBI | CGTCTC | 1 cut(s) | 15 |
| BsmFI | GGGAC | 4 cut(s) | 249, 1328, 1465, 2422 |
| BsmI | GAATGC | 2 cut(s) | 1512, 3036 |
| BsnI | GGCC | 8 cut(s) | 97, 881, 1399, 1650, 2223, 2816, 2860, 2867 |
| Bsp119I | TTCGAA | 1 cut(s) | 2042 |
| Bsp1286I | GDGCHC | 5 cut(s) | 758, 1192, 3328, 3417, 3426 |
| Bsp13I | TCCGGA | 1 cut(s) | 936 |
| Bsp1407I | TGTACA | 1 cut(s) | 1428 |
| Bsp143I | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| Bsp19I | CCATGG | 1 cut(s) | 882 |
| BspACI | CCGC | 7 cut(s) | 312, 811, 1602, 1607, 1651, 2236, 2868 |
| BspANI | GGCC | 8 cut(s) | 97, 881, 1399, 1650, 2223, 2816, 2860, 2867 |
| BspCNI | CTCAG | 8 cut(s) | 520, 954, 994, 1051, 1215, 1828, 1861, 2426 |
| BspEI | TCCGGA | 1 cut(s) | 936 |
| BspFNI | CGCG | 1 cut(s) | 1653 |
| BspHI | TCATGA | 1 cut(s) | 760 |
| BspLI | GGNNCC | 4 cut(s) | 1866, 2410, 2428, 2861 |
| BspMAI | CTGCAG | 1 cut(s) | 3310 |
| BspMI | ACCTGC | 1 cut(s) | 862 |
| BspOI | GCTAGC | 1 cut(s) | 366 |
| BspPI | GGATC | 6 cut(s) | 268, 522, 1895, 2195, 2421, 2434 |
| BspQI | GCTCTTC | 2 cut(s) | 987, 1084 |
| BspT104I | TTCGAA | 1 cut(s) | 2042 |
| BspT107I | GGYRCC | 1 cut(s) | 1864 |
| BsrBI | CCGCTC | 1 cut(s) | 2236 |
| BsrDI | GCAATG | 2 cut(s) | 1041, 1056 |
| BsrGI | TGTACA | 1 cut(s) | 1428 |
| BsrI | ACTGG | 8 cut(s) | 417, 471, 622, 2067, 2084, 2204, 2224, 2785 |
| BssECI | CCNNGG | 4 cut(s) | 882, 1400, 2160, 2862 |
| BssMI | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| BssSI | CACGAG | 1 cut(s) | 2672 |
| BssT1I | CCWWGG | 2 cut(s) | 882, 1400 |
| Bst2BI | CACGAG | 1 cut(s) | 2672 |
| Bst2UI | CCWGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| Bst4CI | ACNGT | 8 cut(s) | 605, 692, 1761, 2038, 2556, 2667, 3134, 3410 |
| Bst6I | CTCTTC | 7 cut(s) | 437, 987, 1084, 1548, 2103, 2571, 2744 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1055, 1255, 2603, 2948 |
| BstAUI | TGTACA | 1 cut(s) | 1428 |
| BstBAI | YACGTR | 1 cut(s) | 2588 |
| BstBI | TTCGAA | 1 cut(s) | 2042 |
| BstC8I | GCNNGC | 7 cut(s) | 364, 750, 754, 999, 2537, 2650, 2786 |
| BstDSI | CCRYGG | 1 cut(s) | 882 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2286 |
| BstF5I | GGATG | 7 cut(s) | 838, 1150, 1521, 2537, 2805, 3169, 3297 |
| BstFNI | CGCG | 1 cut(s) | 1653 |
| BstH2I | RGCGCY | 1 cut(s) | 3017 |
| BstHHI | GCGC | 2 cut(s) | 1655, 3016 |
| BstKTI | GATC | 9 cut(s) | 263, 517, 985, 1084, 1363, 1903, 2203, 2429, 2936 |
| BstMAI | GTCTC | 6 cut(s) | 15, 121, 1788, 1887, 2210, 3450 |
| BstMBI | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 878, 1055, 1255, 1555, 2249, 2467, 2603, 2948, 3421 |
| BstNI | CCWGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| BstNSI | RCATGY | 3 cut(s) | 1001, 1253, 2280 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 462 |
| BstSCI | CCNGG | 4 cut(s) | 1023, 1597, 2160, 2862 |
| BstSFI | CTRYAG | 2 cut(s) | 3306, 3521 |
| BstUI | CGCG | 1 cut(s) | 1653 |
| BstV1I | GCAGC | 9 cut(s) | 825, 1042, 1114, 2479, 2606, 2664, 2667, 2985, 2993 |
| BstV2I | GAAGAC | 3 cut(s) | 77, 1689, 3135 |
| BstX2I | RGATCY | 3 cut(s) | 1081, 2200, 2426 |
| BstYI | RGATCY | 3 cut(s) | 1081, 2200, 2426 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2413 |
| BsuRI | GGCC | 8 cut(s) | 97, 881, 1399, 1650, 2223, 2816, 2860, 2867 |
| BtgI | CCRYGG | 1 cut(s) | 882 |
| BtsCI | GGATG | 7 cut(s) | 838, 1150, 1521, 2537, 2805, 3169, 3297 |
| BtsI | GCAGTG | 4 cut(s) | 1647, 2724, 3212, 3303 |
| BveI | ACCTGC | 1 cut(s) | 862 |
| Cac8I | GCNNGC | 7 cut(s) | 364, 750, 754, 999, 2537, 2650, 2786 |
| CciI | TCATGA | 1 cut(s) | 760 |
| CfoI | GCGC | 2 cut(s) | 1655, 3016 |
| Cfr13I | GGNCC | 5 cut(s) | 19, 1397, 1604, 2409, 2859 |
| CpoI | CGGWCCG | 1 cut(s) | 1604 |
| Csp6I | GTAC | 5 cut(s) | 189, 1429, 1762, 2315, 3199 |
| CspI | CGGWCCG | 1 cut(s) | 1604 |
| CviQI | GTAC | 5 cut(s) | 189, 1429, 1762, 2315, 3199 |
| DpnI | GATC | 9 cut(s) | 262, 516, 984, 1083, 1362, 1902, 2202, 2428, 2935 |
| DpnII | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| DraI | TTTAAA | 3 cut(s) | 333, 387, 1347 |
| EaeI | YGGCCR | 4 cut(s) | 1648, 2221, 2814, 2865 |
| Eam1104I | CTCTTC | 7 cut(s) | 437, 987, 1084, 1548, 2103, 2571, 2744 |
| EarI | CTCTTC | 7 cut(s) | 437, 987, 1084, 1548, 2103, 2571, 2744 |
| Ecl136II | GAGCTC | 1 cut(s) | 756 |
| Eco130I | CCWWGG | 2 cut(s) | 882, 1400 |
| Eco147I | AGGCCT | 1 cut(s) | 97 |
| Eco24I | GRGCYC | 1 cut(s) | 758 |
| Eco32I | GATATC | 1 cut(s) | 3155 |
| Eco47I | GGWCC | 3 cut(s) | 19, 1604, 2409 |
| Eco47III | AGCGCT | 1 cut(s) | 3015 |
| Eco53kI | GAGCTC | 1 cut(s) | 756 |
| Eco72I | CACGTG | 1 cut(s) | 2588 |
| Eco81I | CCTNAGG | 1 cut(s) | 2413 |
| EcoICRI | GAGCTC | 1 cut(s) | 756 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2286 |
| EcoO109I | RGGNCCY | 3 cut(s) | 19, 2409, 2859 |
| EcoRI | GAATTC | 3 cut(s) | 1835, 2044, 3112 |
| EcoRII | CCWGG | 4 cut(s) | 1023, 1597, 2160, 2862 |
| EcoRV | GATATC | 1 cut(s) | 3155 |
| EcoT14I | CCWWGG | 2 cut(s) | 882, 1400 |
| EcoT22I | ATGCAT | 1 cut(s) | 3036 |
| EcoT38I | GRGCYC | 1 cut(s) | 758 |
| ErhI | CCWWGG | 2 cut(s) | 882, 1400 |
| Esp3I | CGTCTC | 1 cut(s) | 15 |
| FaqI | GGGAC | 4 cut(s) | 249, 1328, 1465, 2422 |
| FauI | CCCGC | 1 cut(s) | 305 |
| FbaI | TGATCA | 2 cut(s) | 982, 1360 |
| FblI | GTMKAC | 1 cut(s) | 286 |
| FokI | GGATG | 7 cut(s) | 825, 1157, 1508, 2544, 2812, 3176, 3304 |
| FriOI | GRGCYC | 1 cut(s) | 758 |
| GlaI | GCGC | 2 cut(s) | 1654, 3015 |
| GsuI | CTGGAG | 1 cut(s) | 35 |
| HaeII | RGCGCY | 1 cut(s) | 3017 |
| HaeIII | GGCC | 8 cut(s) | 97, 881, 1399, 1650, 2223, 2816, 2860, 2867 |
| HapII | CCGG | 2 cut(s) | 521, 937 |
| HhaI | GCGC | 2 cut(s) | 1655, 3016 |
| Hin6I | GCGC | 2 cut(s) | 1653, 3014 |
| HinP1I | GCGC | 2 cut(s) | 1653, 3014 |
| HincII | GTYRAC | 3 cut(s) | 727, 1125, 3121 |
| HindII | GTYRAC | 3 cut(s) | 727, 1125, 3121 |
| HindIII | AAGCTT | 3 cut(s) | 1412, 1702, 2295 |
| HpaI | GTTAAC | 1 cut(s) | 727 |
| HpaII | CCGG | 2 cut(s) | 521, 937 |
| HphI | GGTGA | 8 cut(s) | 95, 209, 224, 1266, 1781, 1946, 2815, 3116 |
| Hpy166II | GTNNAC | 7 cut(s) | 287, 727, 1125, 1429, 1471, 3121, 3137 |
| Hpy8I | GTNNAC | 7 cut(s) | 287, 727, 1125, 1429, 1471, 3121, 3137 |
| HpyCH4III | ACNGT | 8 cut(s) | 605, 692, 1761, 2038, 2556, 2667, 3134, 3410 |
| HpyCH4IV | ACGT | 2 cut(s) | 2587, 3417 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 878, 1055, 1255, 1555, 2249, 2467, 2603, 2948, 3421 |
| HpySE526I | ACGT | 2 cut(s) | 2587, 3417 |
| HspAI | GCGC | 2 cut(s) | 1653, 3014 |
| Kpn2I | TCCGGA | 1 cut(s) | 936 |
| Ksp22I | TGATCA | 2 cut(s) | 982, 1360 |
| KspAI | GTTAAC | 1 cut(s) | 727 |
| Kzo9I | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| LguI | GCTCTTC | 2 cut(s) | 987, 1084 |
| LmnI | GCTCC | 3 cut(s) | 1990, 1999, 2677 |
| Lsp1109I | GCAGC | 9 cut(s) | 825, 1042, 1114, 2479, 2606, 2664, 2667, 2985, 2993 |
| LweI | GCATC | 8 cut(s) | 1375, 1627, 1959, 2066, 2522, 2614, 2664, 2938 |
| MaeII | ACGT | 2 cut(s) | 2587, 3417 |
| MaeIII | GTNAC | 5 cut(s) | 1913, 2206, 2284, 3146, 3538 |
| MalI | GATC | 9 cut(s) | 262, 516, 984, 1083, 1362, 1902, 2202, 2428, 2935 |
| MbiI | CCGCTC | 1 cut(s) | 2236 |
| MboI | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| MflI | RGATCY | 3 cut(s) | 1081, 2200, 2426 |
| MhlI | GDGCHC | 5 cut(s) | 758, 1192, 3328, 3417, 3426 |
| MlsI | TGGCCA | 2 cut(s) | 2223, 2816 |
| MluNI | TGGCCA | 2 cut(s) | 2223, 2816 |
| MlyI | GAGTC | 3 cut(s) | 1073, 1439, 2203 |
| MmeI | TCCRAC | 2 cut(s) | 2336, 2404 |
| Mox20I | TGGCCA | 2 cut(s) | 2223, 2816 |
| Mph1103I | ATGCAT | 1 cut(s) | 3036 |
| MroI | TCCGGA | 1 cut(s) | 936 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1093, 2143 |
| MscI | TGGCCA | 2 cut(s) | 2223, 2816 |
| MslI | CAYNNNNRTG | 3 cut(s) | 417, 471, 1967 |
| Msp20I | TGGCCA | 2 cut(s) | 2223, 2816 |
| MspA1I | CMGCKG | 1 cut(s) | 2870 |
| MspI | CCGG | 2 cut(s) | 521, 937 |
| MspR9I | CCNGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| Mva1269I | GAATGC | 2 cut(s) | 1512, 3036 |
| MvaI | CCWGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| MvnI | CGCG | 1 cut(s) | 1653 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 878, 1055, 1255, 1555, 2249, 2467, 2603, 2948, 3421 |
| NcoI | CCATGG | 1 cut(s) | 882 |
| NdeII | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| NheI | GCTAGC | 1 cut(s) | 362 |
| NlaIV | GGNNCC | 4 cut(s) | 1866, 2410, 2428, 2861 |
| NmeAIII | GCCGAG | 1 cut(s) | 3347 |
| NmuCI | GTSAC | 4 cut(s) | 1913, 2206, 2284, 3146 |
| NsiI | ATGCAT | 1 cut(s) | 3036 |
| NspI | RCATGY | 3 cut(s) | 1001, 1253, 2280 |
| NspV | TTCGAA | 1 cut(s) | 2042 |
| PaeI | GCATGC | 1 cut(s) | 1001 |
| PagI | TCATGA | 1 cut(s) | 760 |
| PceI | AGGCCT | 1 cut(s) | 97 |
| PciI | ACATGT | 1 cut(s) | 2276 |
| PciSI | GCTCTTC | 2 cut(s) | 987, 1084 |
| PctI | GAATGC | 2 cut(s) | 1512, 3036 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1093, 2143 |
| PflFI | GACNNNGTC | 2 cut(s) | 7, 166 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 423, 477 |
| PleI | GAGTC | 3 cut(s) | 1072, 1439, 2203 |
| PmaCI | CACGTG | 1 cut(s) | 2588 |
| PmlI | CACGTG | 1 cut(s) | 2588 |
| PpsI | GAGTC | 3 cut(s) | 1072, 1439, 2203 |
| Ppu21I | YACGTR | 1 cut(s) | 2588 |
| PpuMI | RGGWCCY | 2 cut(s) | 19, 2409 |
| PscI | ACATGT | 1 cut(s) | 2276 |
| PshAI | GACNNNNGTC | 1 cut(s) | 462 |
| Psp124BI | GAGCTC | 1 cut(s) | 758 |
| Psp5II | RGGWCCY | 2 cut(s) | 19, 2409 |
| Psp6I | CCWGG | 4 cut(s) | 1023, 1597, 2160, 2862 |
| PspCI | CACGTG | 1 cut(s) | 2588 |
| PspGI | CCWGG | 4 cut(s) | 1023, 1597, 2160, 2862 |
| PspN4I | GGNNCC | 4 cut(s) | 1866, 2410, 2428, 2861 |
| PspPI | GGNCC | 5 cut(s) | 19, 1397, 1604, 2409, 2859 |
| PspPPI | RGGWCCY | 2 cut(s) | 19, 2409 |
| PstI | CTGCAG | 1 cut(s) | 3310 |
| PsuI | RGATCY | 3 cut(s) | 1081, 2200, 2426 |
| PsyI | GACNNNGTC | 2 cut(s) | 7, 166 |
| RsaI | GTAC | 5 cut(s) | 190, 1430, 1763, 2316, 3200 |
| RsaNI | GTAC | 5 cut(s) | 189, 1429, 1762, 2315, 3199 |
| RseI | CAYNNNNRTG | 3 cut(s) | 417, 471, 1967 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1604 |
| RsrII | CGGWCCG | 1 cut(s) | 1604 |
| SacI | GAGCTC | 1 cut(s) | 758 |
| SapI | GCTCTTC | 2 cut(s) | 987, 1084 |
| Sau3AI | GATC | 9 cut(s) | 260, 514, 982, 1081, 1360, 1900, 2200, 2426, 2933 |
| Sau96I | GGNCC | 5 cut(s) | 19, 1397, 1604, 2409, 2859 |
| SchI | GAGTC | 3 cut(s) | 1073, 1439, 2203 |
| ScrFI | CCNGG | 4 cut(s) | 1025, 1599, 2162, 2864 |
| SduI | GDGCHC | 5 cut(s) | 758, 1192, 3328, 3417, 3426 |
| SfaNI | GCATC | 8 cut(s) | 1375, 1627, 1959, 2066, 2522, 2614, 2664, 2938 |
| SfcI | CTRYAG | 2 cut(s) | 3306, 3521 |
| SfuI | TTCGAA | 1 cut(s) | 2042 |
| SinI | GGWCC | 3 cut(s) | 19, 1604, 2409 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 417, 471, 1967 |
| SmlI | CTYRAG | 2 cut(s) | 79, 2913 |
| SmoI | CTYRAG | 2 cut(s) | 79, 2913 |
| SphI | GCATGC | 1 cut(s) | 1001 |
| SseBI | AGGCCT | 1 cut(s) | 97 |
| SsiI | CCGC | 7 cut(s) | 312, 811, 1602, 1607, 1651, 2236, 2868 |
| SspI | AATATT | 3 cut(s) | 611, 2334, 3188 |
| SstI | GAGCTC | 1 cut(s) | 758 |
| StuI | AGGCCT | 1 cut(s) | 97 |
| StyD4I | CCNGG | 4 cut(s) | 1023, 1597, 2160, 2862 |
| StyI | CCWWGG | 2 cut(s) | 882, 1400 |
| TaaI | ACNGT | 8 cut(s) | 605, 692, 1761, 2038, 2556, 2667, 3134, 3410 |
| TaiI | ACGT | 2 cut(s) | 2590, 3420 |
| TaqI | TCGA | 4 cut(s) | 68, 1792, 2042, 3278 |
| TatI | WGTACW | 1 cut(s) | 1428 |
| TauI | GCSGC | 3 cut(s) | 813, 1653, 2870 |
| TseFI | GTSAC | 4 cut(s) | 1913, 2206, 2284, 3146 |
| TseI | GCWGC | 9 cut(s) | 813, 1055, 1102, 2467, 2594, 2652, 2680, 2973, 3006 |
| Tsp45I | GTSAC | 4 cut(s) | 1913, 2206, 2284, 3146 |
| Tth111I | GACNNNGTC | 2 cut(s) | 7, 166 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 423, 477 |
| VpaK11BI | GGWCC | 3 cut(s) | 19, 1604, 2409 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2286 |
| XapI | RAATTY | 7 cut(s) | 1835, 1938, 2044, 3112, 3175, 3280, 3429 |
| XbaI | TCTAGA | 2 cut(s) | 1943, 2212 |
| XceI | RCATGY | 3 cut(s) | 1001, 1253, 2280 |
| XmiI | GTMKAC | 1 cut(s) | 286 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1093, 2143 |
| Zsp2I | ATGCAT | 1 cut(s) | 3036 |