Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002888.1

Orthogroup ID

OG0005456

Physical Location & Seq

Genomic Coordinates Reverse (-)

27448 .. 30439

Gene Structure 2992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002888.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

atgggtagtaacgaaacaaccgggtcgggccagcaggccgggccgagcggaggagaagcgggtcccagcagtagcagcaacccgagcgcagcacgccgtttcccactggcggctcagccggaggtcatgagagccgccgaaaaggacgaccagtacgcctccttcgtctacgacgcttgccgcgacgccttccgccacctctttggtacaagaattgctgtggcttaccagaacgagacaaagcttctcgggcaaatgctctattacattttgactacagggtcgggccagcaaaccctgggagaagagtactgcgatatcactcaggttgcagggccctatgggctgcctccaacaccagcaaggcgtgcacttttcattgtgtaccagacggctcttccttatattgcagaaagaattagttctcgagctgctaatcgcggcattctccttgctgattcccagtctgatcaggtttacagcatcagtgctttgacgagctatgatgctcaatcttcttcaagcactcgtgcctccacgccgccgccgtctgcttcagctctcaaaagattgaagcagagattgaatgcattgtggctttctgctgttcggaaatggccaacggttctccctatagctcgagagtttttgcagttggttatacgtgccaacctgatgttcttttactttgaaggtctctattatcatatatcgaaacgtgctgcaggcattcgttatgtgttcattggaaaaccatctaaccaaaggcctagataccaaattctgggcatatttctactgattcagctttgtatcattgctgctgaaggactacggcgtagcaatttatcctctatagcaacttcagctcagcagacctttggtgcacaccaaacttcatcaggtcgagatttgcctgtgttaaatgaggagggcaatttgatatcagtggacggtgccaagggtagttgggtttctgattcatcaacttcagaggtgagtgggatcagcaaatgcacactctgtttgagcaatcgccaacaccctacagccacaccttgtggtcatgtattctgctggagttgcattatggaatggtgcaacgaaaaacctgaatgccctctctgccggacccctattactcattcaagcctagtttgcttgtaccattcagacttctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005829 GO:0006082 GO:0006464 GO:0006513 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009790 GO:0009791 GO:0009793 GO:0009853 GO:0009987 GO:0010154 GO:0010381 GO:0015031 GO:0015833 GO:0015919 GO:0016020 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0016567 GO:0016740 GO:0017038 GO:0019395 GO:0019538 GO:0019752 GO:0019787 GO:0022406 GO:0022414 GO:0030258 GO:0031090 GO:0031903 GO:0032446 GO:0032501 GO:0032502 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0036211 GO:0042579 GO:0042886 GO:0043094 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0061458 GO:0065002 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0098588 GO:0098805 GO:0140056 GO:0140096 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

Pex2_Pex12 zf-C3HC4_3 zf-RING_2

Protein Analysis

393

Amino Acids

43.0

Weight (kDa)

8.78

Isoelectric Point (pI)

48.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26350 AT2G26350 AT2G26350 AT2G26350 AT2G26350
fragaria_vesca	FvH4_2g31140 FvH4_2g31140 FvH4_2g31140 FvH4_2g31140 FvH4_2g31140
malus_domestica	MD08G1070400.v1.1 MD15G1051800.v1.1
prunus_persica	Prupe.1G405700_v2.0.a1 Prupe.1G405700_v2.0.a1 Prupe.1G405700_v2.0.a1
pyrus_communis	pycom08g05830 pycom15g04950
rosa_chinensis	RchiOBHm_Chr6g0311631
rosa_laevigata	RLG00000010385
rosa_multiflora	Rmu_sc0002888.1_g000006
rosa_roxburghii	Rroxscaffold_7G00157420
rosa_rugosa	Rorug06G0390100 Rorug06G0390100 Rorug06G0390200
rosa_samantha	Rh6AG505500 Rh6BG516300 Rh6CG522200 Rh6DG508000
rosa_wichuraiana	Rw6G044000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	280
AccB1I	GGYRCC	1 cut(s)	956
AccB7I	CCANNNNNTGG	1 cut(s)	784
AccBSI	CCGCTC	1 cut(s)	48
AccI	GTMKAC	1 cut(s)	168
AccII	CGCG	2 cut(s)	183, 441
AciI	CCGC	9 cut(s)	48, 59, 110, 135, 181, 193, 441, 542, 545
AclWI	GGATC	1 cut(s)	1013
AcoI	YGGCCR	1 cut(s)	617
AcsI	RAATTY	1 cut(s)	780
AcuI	CTGAAG	4 cut(s)	540, 846, 849, 975
AcyI	GRCGYC	1 cut(s)	186
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	5 cut(s)	155, 208, 311, 386, 1166
AfiI	CCNNNNNNNGG	3 cut(s)	50, 109, 784
AgsI	TTSAA	5 cut(s)	522, 574, 586, 692, 1149
AjnI	CCWGG	1 cut(s)	297
AjuI	GAANNNNNNNTTGG	2 cut(s)	662, 694
AluBI	AGCT	7 cut(s)	244, 431, 501, 560, 638, 808, 869
AluI	AGCT	7 cut(s)	244, 431, 501, 560, 638, 808, 869
Alw21I	GWGCWC	2 cut(s)	373, 889
Alw26I	GTCTC	2 cut(s)	230, 701
Alw44I	GTGCAC	2 cut(s)	369, 885
AlwI	GGATC	1 cut(s)	1013
Ama87I	CYCGRG	4 cut(s)	82, 248, 426, 639
AoxI	GGCC	7 cut(s)	28, 36, 41, 286, 335, 617, 767
ApaI	GGGCCC	1 cut(s)	339
ApaLI	GTGCAC	2 cut(s)	369, 885
ApeKI	GCWGC	6 cut(s)	75, 89, 346, 431, 722, 821
ApoI	RAATTY	1 cut(s)	780
Asp700I	GAANNNNTTC	1 cut(s)	421
AspLEI	GCGC	1 cut(s)	89
AspS9I	GGNCC	7 cut(s)	28, 41, 62, 286, 335, 336, 1131
AsuC2I	CCSGG	2 cut(s)	22, 40
AsuHPI	GGTGA	1 cut(s)	1009
AvaI	CYCGRG	4 cut(s)	82, 248, 426, 639
AvaII	GGWCC	2 cut(s)	62, 1131
BaeGI	GKGCMC	3 cut(s)	339, 373, 889
BalI	TGGCCA	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	956
BanII	GRGCYC	1 cut(s)	339
BarI	GAAGNNNNNNTAC	2 cut(s)	146, 178
BauI	CACGAG	1 cut(s)	528
Bbv12I	GWGCWC	2 cut(s)	373, 889
BbvI	GCAGC	6 cut(s)	87, 101, 333, 418, 709, 808
BccI	CCATC	1 cut(s)	763
BceAI	ACGGC	4 cut(s)	81, 408, 532, 851
BciT130I	CCWGG	1 cut(s)	299
BclI	TGATCA	1 cut(s)	469
BcnI	CCSGG	2 cut(s)	22, 40
BcoDI	GTCTC	2 cut(s)	230, 701
BfaI	CTAG	3 cut(s)	771, 1154, 1180
BfmI	CTRYAG	5 cut(s)	276, 633, 723, 855, 1047
BglI	GCCNNNNNGGC	1 cut(s)	343
BlpI	GCTNAGC	2 cut(s)	114, 870
BmcAI	AGTACT	1 cut(s)	311
Bme1390I	CCNGG	3 cut(s)	22, 40, 299
Bme18I	GGWCC	2 cut(s)	62, 1131
BmeT110I	CYCGRG	4 cut(s)	82, 248, 426, 639
BmgT120I	GGNCC	7 cut(s)	28, 41, 62, 286, 335, 336, 1131
BmiI	GGNNCC	5 cut(s)	63, 64, 337, 958, 1133
BmrFI	CCNGG	3 cut(s)	22, 40, 299
BmrI	ACTGGG	1 cut(s)	457
BmsI	GCATC	2 cut(s)	492, 496
BmuI	ACTGGG	1 cut(s)	457
BpmI	CTGGAG	1 cut(s)	1099
Bpu1102I	GCTNAGC	2 cut(s)	114, 870
BpuMI	CCSGG	2 cut(s)	22, 40
BsaAI	YACGTR	1 cut(s)	665
BsaHI	GRCGYC	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	701
BsaJI	CCNNGG	3 cut(s)	297, 298, 960
Bsc4I	CCNNNNNNNGG	3 cut(s)	50, 109, 784
Bse1I	ACTGG	3 cut(s)	111, 151, 463
Bse3DI	GCAATG	1 cut(s)	816
BseBI	CCWGG	1 cut(s)	299
BseDI	CCNNGG	3 cut(s)	297, 298, 960
BseLI	CCNNNNNNNGG	3 cut(s)	50, 109, 784
BseMI	GCAATG	1 cut(s)	816
BseMII	CTCAG	3 cut(s)	128, 338, 884
BseNI	ACTGG	3 cut(s)	111, 151, 463
BseRI	GAGGAG	2 cut(s)	66, 944
BseSI	GKGCMC	3 cut(s)	339, 373, 889
BseXI	GCAGC	6 cut(s)	87, 101, 333, 418, 709, 808
BseYI	CCCAGC	1 cut(s)	65
Bsh1236I	CGCG	2 cut(s)	183, 441
BshFI	GGCC	7 cut(s)	30, 38, 43, 288, 337, 619, 769
BshNI	GGYRCC	1 cut(s)	956
BsiHKAI	GWGCWC	2 cut(s)	373, 889
BsiHKCI	CYCGRG	4 cut(s)	82, 248, 426, 639
BsiSI	CCGG	4 cut(s)	21, 39, 119, 1129
BslFI	GGGAC	1 cut(s)	48
BslI	CCNNNNNNNGG	3 cut(s)	50, 109, 784
BsmAI	GTCTC	2 cut(s)	230, 701
BsmFI	GGGAC	1 cut(s)	48
BsmI	GAATGC	4 cut(s)	444, 592, 729, 1121
BsnI	GGCC	7 cut(s)	30, 38, 43, 288, 337, 619, 769
Bso31I	GGTCTC	1 cut(s)	701
BsoBI	CYCGRG	4 cut(s)	82, 248, 426, 639
Bsp120I	GGGCCC	1 cut(s)	335
Bsp1286I	GDGCHC	3 cut(s)	339, 373, 889
Bsp143I	GATC	2 cut(s)	469, 1005
Bsp1720I	GCTNAGC	2 cut(s)	114, 870
BspACI	CCGC	9 cut(s)	48, 59, 110, 135, 181, 193, 441, 542, 545
BspANI	GGCC	7 cut(s)	30, 38, 43, 288, 337, 619, 769
BspCNI	CTCAG	3 cut(s)	127, 337, 883
BspFNI	CGCG	2 cut(s)	183, 441
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	5 cut(s)	63, 64, 337, 958, 1133
BspMAI	CTGCAG	1 cut(s)	727
BspPI	GGATC	1 cut(s)	1013
BspQI	GCTCTTC	1 cut(s)	402
BspT107I	GGYRCC	1 cut(s)	956
BspTNI	GGTCTC	1 cut(s)	701
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	1 cut(s)	816
BsrI	ACTGG	3 cut(s)	111, 151, 463
BssECI	CCNNGG	3 cut(s)	297, 298, 960
BssMI	GATC	2 cut(s)	469, 1005
BssNI	GRCGYC	1 cut(s)	186
BssSI	CACGAG	1 cut(s)	528
BssT1I	CCWWGG	1 cut(s)	960
Bst2BI	CACGAG	1 cut(s)	528
Bst2UI	CCWGG	1 cut(s)	299
Bst4CI	ACNGT	2 cut(s)	625, 956
Bst6I	CTCTTC	2 cut(s)	300, 402
BstACI	GRCGYC	1 cut(s)	186
BstAPI	GCANNNNNTGC	1 cut(s)	368
BstBAI	YACGTR	1 cut(s)	665
BstC8I	GCNNGC	7 cut(s)	32, 36, 94, 178, 290, 369, 727
BstDEI	CTNAG	3 cut(s)	114, 324, 870
BstFNI	CGCG	2 cut(s)	183, 441
BstHHI	GCGC	1 cut(s)	89
BstKTI	GATC	2 cut(s)	472, 1008
BstMAI	GTCTC	2 cut(s)	230, 701
BstMBI	GATC	2 cut(s)	469, 1005
BstNI	CCWGG	1 cut(s)	299
BstSCI	CCNGG	3 cut(s)	20, 38, 297
BstSFI	CTRYAG	5 cut(s)	276, 633, 723, 855, 1047
BstSLI	GKGCMC	3 cut(s)	339, 373, 889
BstUI	CGCG	2 cut(s)	183, 441
BstV1I	GCAGC	6 cut(s)	87, 101, 333, 418, 709, 808
BstXI	CCANNNNNNTGG	1 cut(s)	203
BsuRI	GGCC	7 cut(s)	30, 38, 43, 288, 337, 619, 769
BtsIMutI	CAGTG	3 cut(s)	104, 493, 954
Cac8I	GCNNGC	7 cut(s)	32, 36, 94, 178, 290, 369, 727
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	1 cut(s)	89
Cfr13I	GGNCC	7 cut(s)	28, 41, 62, 286, 335, 336, 1131
CseI	GACGC	2 cut(s)	182, 194
Csp6I	GTAC	5 cut(s)	154, 207, 310, 385, 1165
CviAII	CATG	2 cut(s)	127, 1067
CviQI	GTAC	5 cut(s)	154, 207, 310, 385, 1165
DdeI	CTNAG	3 cut(s)	114, 324, 870
DpnI	GATC	2 cut(s)	471, 1007
DpnII	GATC	2 cut(s)	469, 1005
DraIII	CACNNNGTG	1 cut(s)	1061
DrdI	GACNNNNNNGTC	1 cut(s)	280
DseDI	GACNNNNNNGTC	1 cut(s)	280
EaeI	YGGCCR	1 cut(s)	617
Eam1104I	CTCTTC	2 cut(s)	300, 402
EarI	CTCTTC	2 cut(s)	300, 402
EciI	GGCGGA	1 cut(s)	182
Eco130I	CCWWGG	1 cut(s)	960
Eco147I	AGGCCT	1 cut(s)	769
Eco24I	GRGCYC	1 cut(s)	339
Eco31I	GGTCTC	1 cut(s)	701
Eco32I	GATATC	2 cut(s)	319, 945
Eco47I	GGWCC	2 cut(s)	62, 1131
Eco57I	CTGAAG	4 cut(s)	540, 846, 849, 975
Eco88I	CYCGRG	4 cut(s)	82, 248, 426, 639
EcoO109I	RGGNCCY	3 cut(s)	62, 335, 336
EcoRII	CCWGG	1 cut(s)	297
EcoRV	GATATC	2 cut(s)	319, 945
EcoT14I	CCWWGG	1 cut(s)	960
EcoT22I	ATGCAT	1 cut(s)	592
EcoT38I	GRGCYC	1 cut(s)	339
ErhI	CCWWGG	1 cut(s)	960
FaeI	CATG	2 cut(s)	130, 1070
FaqI	GGGAC	1 cut(s)	48
FatI	CATG	2 cut(s)	126, 1066
FauI	CCCGC	1 cut(s)	52
FbaI	TGATCA	1 cut(s)	469
FblI	GTMKAC	1 cut(s)	168
FriOI	GRGCYC	1 cut(s)	339
FspBI	CTAG	3 cut(s)	771, 1154, 1180
GlaI	GCGC	1 cut(s)	88
GsaI	CCCAGC	1 cut(s)	69
GsuI	CTGGAG	1 cut(s)	1099
HaeIII	GGCC	7 cut(s)	30, 38, 43, 288, 337, 619, 769
HapII	CCGG	4 cut(s)	21, 39, 119, 1129
HgaI	GACGC	2 cut(s)	182, 194
HhaI	GCGC	1 cut(s)	89
Hin1I	GRCGYC	1 cut(s)	186
Hin1II	CATG	2 cut(s)	130, 1070
Hin6I	GCGC	1 cut(s)	87
HinP1I	GCGC	1 cut(s)	87
HindIII	AAGCTT	1 cut(s)	242
HinfI	GANTC	3 cut(s)	458, 802, 980
HpaII	CCGG	4 cut(s)	21, 39, 119, 1129
HphI	GGTGA	1 cut(s)	1009
Hpy166II	GTNNAC	6 cut(s)	169, 371, 385, 478, 887, 952
Hpy188I	TCNGA	5 cut(s)	469, 612, 979, 994, 1174
Hpy188III	TCNNGA	4 cut(s)	127, 426, 641, 908
Hpy8I	GTNNAC	6 cut(s)	169, 371, 385, 478, 887, 952
Hpy99I	CGWCG	2 cut(s)	176, 188
HpyAV	CCTTC	4 cut(s)	172, 199, 686, 821
HpyCH4III	ACNGT	2 cut(s)	625, 956
HpyCH4IV	ACGT	2 cut(s)	664, 718
HpyF3I	CTNAG	3 cut(s)	114, 324, 870
HpySE526I	ACGT	2 cut(s)	664, 718
Hsp92I	GRCGYC	1 cut(s)	186
Hsp92II	CATG	2 cut(s)	130, 1070
HspAI	GCGC	1 cut(s)	87
KflI	GGGWCCC	1 cut(s)	62
Ksp22I	TGATCA	1 cut(s)	469
Kzo9I	GATC	2 cut(s)	469, 1005
LguI	GCTCTTC	1 cut(s)	402
Lsp1109I	GCAGC	6 cut(s)	87, 101, 333, 418, 709, 808
LweI	GCATC	2 cut(s)	492, 496
MaeI	CTAG	3 cut(s)	771, 1154, 1180
MaeII	ACGT	2 cut(s)	664, 718
MaeIII	GTNAC	1 cut(s)	8
MalI	GATC	2 cut(s)	471, 1007
MbiI	CCGCTC	1 cut(s)	48
MboI	GATC	2 cut(s)	469, 1005
MboII	GAAGA	4 cut(s)	317, 389, 507, 510
MhlI	GDGCHC	3 cut(s)	339, 373, 889
MlsI	TGGCCA	1 cut(s)	619
MluCI	AATT	5 cut(s)	213, 417, 780, 844, 937
MluNI	TGGCCA	1 cut(s)	619
MmeI	TCCRAC	1 cut(s)	377
Mox20I	TGGCCA	1 cut(s)	619
Mph1103I	ATGCAT	1 cut(s)	592
MroXI	GAANNNNTTC	1 cut(s)	421
MscI	TGGCCA	1 cut(s)	619
MseI	TTAA	1 cut(s)	923
Msp20I	TGGCCA	1 cut(s)	619
MspI	CCGG	4 cut(s)	21, 39, 119, 1129
MspR9I	CCNGG	3 cut(s)	22, 40, 299
Mva1269I	GAATGC	4 cut(s)	444, 592, 729, 1121
MvaI	CCWGG	1 cut(s)	299
MvnI	CGCG	2 cut(s)	183, 441
NciI	CCSGG	2 cut(s)	22, 40
NdeII	GATC	2 cut(s)	469, 1005
NlaIII	CATG	2 cut(s)	130, 1070
NlaIV	GGNNCC	5 cut(s)	63, 64, 337, 958, 1133
NmeAIII	GCCGAG	1 cut(s)	69
NsiI	ATGCAT	1 cut(s)	592
PaeR7I	CTCGAG	2 cut(s)	426, 639
PagI	TCATGA	1 cut(s)	126
PasI	CCCWGGG	1 cut(s)	298
PceI	AGGCCT	1 cut(s)	769
PciSI	GCTCTTC	1 cut(s)	402
PcsI	WCGNNNNNNNCGW	3 cut(s)	162, 180, 545
PctI	GAATGC	4 cut(s)	444, 592, 729, 1121
PdmI	GAANNNNTTC	1 cut(s)	421
PfeI	GAWTC	3 cut(s)	458, 802, 980
PflMI	CCANNNNNTGG	1 cut(s)	784
Ppu21I	YACGTR	1 cut(s)	665
PpuMI	RGGWCCY	1 cut(s)	62
Psp5II	RGGWCCY	1 cut(s)	62
Psp6I	CCWGG	1 cut(s)	297
PspFI	CCCAGC	1 cut(s)	65
PspGI	CCWGG	1 cut(s)	297
PspN4I	GGNNCC	5 cut(s)	63, 64, 337, 958, 1133
PspOMI	GGGCCC	1 cut(s)	335
PspPI	GGNCC	7 cut(s)	28, 41, 62, 286, 335, 336, 1131
PspPPI	RGGWCCY	1 cut(s)	62
PstI	CTGCAG	1 cut(s)	727
RsaI	GTAC	5 cut(s)	155, 208, 311, 386, 1166
RsaNI	GTAC	5 cut(s)	154, 207, 310, 385, 1165
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	1 cut(s)	923
Sau3AI	GATC	2 cut(s)	469, 1005
Sau96I	GGNCC	7 cut(s)	28, 41, 62, 286, 335, 336, 1131
ScaI	AGTACT	1 cut(s)	311
ScrFI	CCNGG	3 cut(s)	22, 40, 299
SduI	GDGCHC	3 cut(s)	339, 373, 889
SfaNI	GCATC	2 cut(s)	492, 496
SfcI	CTRYAG	5 cut(s)	276, 633, 723, 855, 1047
Sfr274I	CTCGAG	2 cut(s)	426, 639
SinI	GGWCC	2 cut(s)	62, 1131
SlaI	CTCGAG	2 cut(s)	426, 639
SmlI	CTYRAG	2 cut(s)	426, 639
SmoI	CTYRAG	2 cut(s)	426, 639
Sse9I	AATT	5 cut(s)	213, 417, 780, 844, 937
SseBI	AGGCCT	1 cut(s)	769
SsiI	CCGC	9 cut(s)	48, 59, 110, 135, 181, 193, 441, 542, 545
SspMI	CTAG	3 cut(s)	771, 1154, 1180
StuI	AGGCCT	1 cut(s)	769
StyD4I	CCNGG	3 cut(s)	20, 38, 297
StyI	CCWWGG	1 cut(s)	960
TaaI	ACNGT	2 cut(s)	625, 956
TaiI	ACGT	2 cut(s)	667, 721
TaqI	TCGA	4 cut(s)	427, 640, 713, 907
TasI	AATT	5 cut(s)	213, 417, 780, 844, 937
TatI	WGTACW	1 cut(s)	309
TauI	GCSGC	6 cut(s)	113, 137, 183, 444, 544, 547
TfiI	GAWTC	3 cut(s)	458, 802, 980
Tru1I	TTAA	1 cut(s)	923
Tru9I	TTAA	1 cut(s)	923
TscAI	CASTG	3 cut(s)	111, 493, 954
TseI	GCWGC	6 cut(s)	75, 89, 346, 431, 722, 821
TspDTI	ATGAA	4 cut(s)	367, 733, 888, 972
TspRI	CASTG	3 cut(s)	111, 493, 954
Van91I	CCANNNNNTGG	1 cut(s)	784
VneI	GTGCAC	2 cut(s)	369, 885
VpaK11BI	GGWCC	2 cut(s)	62, 1131
XapI	RAATTY	1 cut(s)	780
XhoI	CTCGAG	2 cut(s)	426, 639
XmiI	GTMKAC	1 cut(s)	168
XmnI	GAANNNNTTC	1 cut(s)	421
XspI	CTAG	3 cut(s)	771, 1154, 1180
ZrmI	AGTACT	1 cut(s)	311
Zsp2I	ATGCAT	1 cut(s)	592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.