Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003058.1

Orthogroup ID

OG0015200

Physical Location & Seq

Genomic Coordinates Reverse (-)

19331 .. 20863

Gene Structure 1533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

atgacagagttactcatgctaagctcagctatggagcttgagctcgacctctccggctgcagcactgaaaccacaagcacgaccaacacggccatttccccagaccagtggtacgattggtctccggtcgtcgactgggagtctctcgctccgattgaccagctcgccggcggtggagactttcacgagctgatcgagtcgatgatggagggccgagacggcggcgagatggactctccgtcgtccgagaccattgaggaagcgtcaaactcgtgttacaccacgacgtcgtcgcagtcgacggacgtgacgatgctggaggaaggcgtggcatcgaacggcgaggattcgaaggggctgagattggtgcatctgttgatggcggcggcggaggcgctgaccggcgccaacaagagcagagatctggctcgggtgatattggttcggctcaaggagttggtctccccaactgacggtactaacatggagaggctggcggcgtattttaccgaggcgcttcagggtttgctagaaggcgccgggggtgtcagccactccaagcatttgttcggaaatgggtcccacagggagcacggccaccatccgacggacgtgatggcggcgtttcagctacttcaggacatgtcgccctatgtcaagtttgggcacttcacggccaatcaggccattttggaggctgtggcccatgacaggagggtccacatagtggactatgacatcatggagggaatccaatggccctccttgatgcaggccttggtgtccaggaaggatggcccaccgaccccgcatctgaggatcaccgctttgtcgcgaggcgggagcggccggaggtcgatagggaccgtccaagagaccggtcgtcgtctcacggcgtttgccacgtccattggtcaaccgttttcgtttcatcaatgtaggttggattcggacgagacatttcgaccgtctgctctaaagttggttaagggcgaggccttggtaataaactgcatgctgaaccttccacactttagttatcgatccccggattcgattgcttcctttttatctggagcgaaaaccctaaacccgagactggtaactttggttgaagaagaggttaggcctgccggagacggtggctttgtggcccgcttcatggactcattgtatcactactcggctgtctacgactcgctcgaggccggcttcccaatgcagagccgggctcgagaattagtggagagagtgttcttgggaccccgaatagctgggtcgttggctcgtatctatcgggctcacggagaggtaggctgctcttggtgggagtggttaggtgcgatagggtttaagccaatgccgataagctttgccaatcattgtcaggcaaagcttttgttgggtctttttaatgacggttatagggtggaggaggtggcaaatcataggttggttttaggttggaaatcacggtccttactatcagcttctatttggacttcacccccacaatctgattttgctgattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031326 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

510

Amino Acids

55.93

Weight (kDa)

5.35

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	122 - 501	5.8e-105	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08250
fragaria_vesca	FvH4_2g26540
malus_domestica	MD08G1167600.v1.1 MD15G1353200.v1.1
prunus_persica	Prupe.1G501500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0295411
rosa_laevigata	RLG00000011806
rosa_multiflora	Rmu_co8465007.1_g000001 Rmu_sc0003058.1_g000004
rosa_roxburghii	Rroxscaffold_7G00172520
rosa_rugosa	Rorug06G0250400
rosa_samantha	Rh6AG363800 Rh6BG372000 Rh6CG378400 Rh6DG364800
rosa_wichuraiana	Rw6G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	716
AatII	GACGTC	1 cut(s)	290
AccB1I	GGYRCC	2 cut(s)	404, 536
AccB7I	CCANNNNNTGG	1 cut(s)	727
AccBSI	CCGCTC	1 cut(s)	846
AccI	GTMKAC	3 cut(s)	132, 299, 1191
AccII	CGCG	1 cut(s)	835
AclWI	GGATC	2 cut(s)	827, 1038
AcoI	YGGCCR	4 cut(s)	90, 595, 675, 847
AcuI	CTGAAG	2 cut(s)	503, 620
AcyI	GRCGYC	3 cut(s)	287, 405, 537
AdeI	CACNNNGTG	1 cut(s)	727
AfaI	GTAC	2 cut(s)	113, 478
AfiI	CCNNNNNNNGG	6 cut(s)	473, 607, 711, 727, 1099, 1162
AflIII	ACRYGT	1 cut(s)	642
AgeI	ACCGGT	1 cut(s)	878
AgsI	TTSAA	1 cut(s)	1115
AhdI	GACNNNNNGTC	3 cut(s)	139, 238, 882
AjiI	CACGTC	3 cut(s)	307, 613, 906
AjnI	CCWGG	1 cut(s)	785
AjuI	GAANNNNNNNTTGG	2 cut(s)	551, 583
AloI	GAACNNNNNNTCC	2 cut(s)	1238, 1270
Alw21I	GWGCWC	2 cut(s)	45, 594
AlwI	GGATC	2 cut(s)	827, 1038
Ama87I	CYCGRG	4 cut(s)	429, 1093, 1202, 1233
ApeKI	GCWGC	3 cut(s)	57, 60, 1317
ArsI	GACNNNNNNTTYG	2 cut(s)	1130, 1162
AsiGI	ACCGGT	1 cut(s)	878
AspLEI	GCGC	4 cut(s)	397, 407, 517, 539
AsuC2I	CCSGG	3 cut(s)	541, 1049, 1229
AsuHPI	GGTGA	3 cut(s)	445, 814, 1497
AsuII	TTCGAA	1 cut(s)	350
AvaI	CYCGRG	4 cut(s)	429, 1093, 1202, 1233
AvaII	GGWCC	5 cut(s)	579, 718, 864, 1262, 1476
BaeGI	GKGCMC	1 cut(s)	669
BanI	GGYRCC	2 cut(s)	404, 536
BanII	GRGCYC	3 cut(s)	45, 1234, 1303
BauI	CACGAG	2 cut(s)	185, 271
Bbv12I	GWGCWC	2 cut(s)	45, 594
BbvI	GCAGC	3 cut(s)	44, 72, 1304
BccI	CCATC	6 cut(s)	199, 223, 373, 609, 610, 788
BceAI	ACGGC	6 cut(s)	105, 235, 355, 610, 690, 909
BciT130I	CCWGG	1 cut(s)	787
BcnI	CCSGG	3 cut(s)	541, 1049, 1229
BfaI	CTAG	1 cut(s)	530
BfmI	CTRYAG	1 cut(s)	58
BfoI	RGCGCY	4 cut(s)	398, 408, 518, 540
BglI	GCCNNNNNGGC	2 cut(s)	219, 683
BglII	AGATCT	1 cut(s)	421
BisI	GCNGC	9 cut(s)	58, 61, 223, 384, 387, 498, 621, 847, 1318
BlpI	GCTNAGC	2 cut(s)	20, 25
BlsI	GCNGC	9 cut(s)	59, 62, 224, 385, 388, 499, 622, 848, 1319
Bme1390I	CCNGG	4 cut(s)	541, 787, 1049, 1229
Bme18I	GGWCC	5 cut(s)	579, 718, 864, 1262, 1476
BmeRI	GACNNNNNGTC	3 cut(s)	139, 238, 882
BmeT110I	CYCGRG	4 cut(s)	429, 1093, 1202, 1233
BmgBI	CACGTC	3 cut(s)	307, 613, 906
BmiI	GGNNCC	8 cut(s)	406, 538, 580, 581, 719, 865, 1263, 1264
BmrFI	CCNGG	4 cut(s)	541, 787, 1049, 1229
BmrI	ACTGGG	1 cut(s)	145
BmsI	GCATC	5 cut(s)	303, 341, 379, 759, 820
BmuI	ACTGGG	1 cut(s)	145
BplI	GAGNNNNNCTC	6 cut(s)	218, 250, 446, 478, 1216, 1248
BpmI	CTGGAG	2 cut(s)	338, 1095
Bpu1102I	GCTNAGC	2 cut(s)	20, 25
Bpu14I	TTCGAA	1 cut(s)	350
BpuEI	CTTGAG	2 cut(s)	59, 434
BpuMI	CCSGG	3 cut(s)	541, 1049, 1229
Bsa29I	ATCGAT	1 cut(s)	1042
BsaHI	GRCGYC	3 cut(s)	287, 405, 537
BsaI	GGTCTC	4 cut(s)	126, 242, 466, 869
BsaJI	CCNNGG	5 cut(s)	510, 540, 777, 999, 1047
BsaWI	WCCGGW	2 cut(s)	124, 878
BsaXI	ACNNNNNCTCC	2 cut(s)	1238, 1268
Bsc4I	CCNNNNNNNGG	6 cut(s)	473, 607, 711, 727, 1099, 1162
Bse118I	RCCGGY	4 cut(s)	167, 401, 878, 1208
Bse1I	ACTGG	3 cut(s)	106, 140, 1104
BseBI	CCWGG	1 cut(s)	787
BseCI	ATCGAT	1 cut(s)	1042
BseDI	CCNNGG	5 cut(s)	510, 540, 777, 999, 1047
BseGI	GGATG	2 cut(s)	601, 799
BseLI	CCNNNNNNNGG	6 cut(s)	473, 607, 711, 727, 1099, 1162
BseMII	CTCAG	3 cut(s)	39, 350, 806
BseNI	ACTGG	3 cut(s)	106, 140, 1104
BseRI	GAGGAG	1 cut(s)	1448
BseSI	GKGCMC	1 cut(s)	669
BseX3I	CGGCCG	1 cut(s)	847
BseXI	GCAGC	3 cut(s)	44, 72, 1304
BseYI	CCCAGC	1 cut(s)	1274
Bsh1236I	CGCG	1 cut(s)	835
Bsh1285I	CGRYCG	4 cut(s)	129, 850, 883, 968
BshNI	GGYRCC	2 cut(s)	404, 536
BshTI	ACCGGT	1 cut(s)	878
BshVI	ATCGAT	1 cut(s)	1042
BsiEI	CGRYCG	4 cut(s)	129, 850, 883, 968
BsiHKAI	GWGCWC	2 cut(s)	45, 594
BsiHKCI	CYCGRG	4 cut(s)	429, 1093, 1202, 1233
BslFI	GGGAC	3 cut(s)	565, 877, 1275
BslI	CCNNNNNNNGG	6 cut(s)	473, 607, 711, 727, 1099, 1162
BsmBI	CGTCTC	3 cut(s)	210, 893, 1131
BsmFI	GGGAC	3 cut(s)	565, 877, 1275
Bso31I	GGTCTC	4 cut(s)	126, 242, 466, 869
BsoBI	CYCGRG	4 cut(s)	429, 1093, 1202, 1233
Bsp119I	TTCGAA	1 cut(s)	350
Bsp1286I	GDGCHC	5 cut(s)	45, 594, 669, 1234, 1303
Bsp143I	GATC	4 cut(s)	192, 421, 819, 1043
Bsp1720I	GCTNAGC	2 cut(s)	20, 25
Bsp68I	TCGCGA	1 cut(s)	835
BspCNI	CTCAG	3 cut(s)	38, 351, 807
BspDI	ATCGAT	1 cut(s)	1042
BspFNI	CGCG	1 cut(s)	835
BspLI	GGNNCC	8 cut(s)	406, 538, 580, 581, 719, 865, 1263, 1264
BspMAI	CTGCAG	1 cut(s)	62
BspPI	GGATC	2 cut(s)	827, 1038
BspT104I	TTCGAA	1 cut(s)	350
BspT107I	GGYRCC	2 cut(s)	404, 536
BspTNI	GGTCTC	4 cut(s)	126, 242, 466, 869
BsrBI	CCGCTC	1 cut(s)	846
BsrFI	RCCGGY	4 cut(s)	167, 401, 878, 1208
BsrI	ACTGG	3 cut(s)	106, 140, 1104
BssAI	RCCGGY	4 cut(s)	167, 401, 878, 1208
BssECI	CCNNGG	5 cut(s)	510, 540, 777, 999, 1047
BssMI	GATC	4 cut(s)	192, 421, 819, 1043
BssNI	GRCGYC	3 cut(s)	287, 405, 537
BssSI	CACGAG	2 cut(s)	185, 271
BssT1I	CCWWGG	2 cut(s)	777, 999
Bst2BI	CACGAG	2 cut(s)	185, 271
Bst2UI	CCWGG	1 cut(s)	787
Bst4CI	ACNGT	7 cut(s)	476, 868, 921, 969, 1142, 1421, 1476
Bst6I	CTCTTC	1 cut(s)	1113
BstACI	GRCGYC	3 cut(s)	287, 405, 537
BstBI	TTCGAA	1 cut(s)	350
BstC8I	GCNNGC	8 cut(s)	165, 169, 495, 774, 1016, 1131, 1156, 1210
BstDEI	CTNAG	4 cut(s)	20, 25, 359, 815
BstF5I	GGATG	2 cut(s)	601, 799
BstFNI	CGCG	1 cut(s)	835
BstH2I	RGCGCY	4 cut(s)	398, 408, 518, 540
BstHHI	GCGC	4 cut(s)	397, 407, 517, 539
BstKTI	GATC	4 cut(s)	195, 424, 822, 1046
BstMBI	GATC	4 cut(s)	192, 421, 819, 1043
BstMCI	CGRYCG	4 cut(s)	129, 850, 883, 968
BstMWI	GCNNNNNNNGC	4 cut(s)	219, 392, 683, 846
BstNI	CCWGG	1 cut(s)	787
BstNSI	RCATGY	2 cut(s)	646, 1018
BstSCI	CCNGG	4 cut(s)	539, 785, 1047, 1227
BstSFI	CTRYAG	1 cut(s)	58
BstSLI	GKGCMC	1 cut(s)	669
BstUI	CGCG	1 cut(s)	835
BstV1I	GCAGC	3 cut(s)	44, 72, 1304
BstX2I	RGATCY	1 cut(s)	421
BstXI	CCANNNNNNTGG	1 cut(s)	108
BstYI	RGATCY	1 cut(s)	421
BstZI	CGGCCG	1 cut(s)	847
Bsu15I	ATCGAT	1 cut(s)	1042
BsuTUI	ATCGAT	1 cut(s)	1042
BtrI	CACGTC	3 cut(s)	307, 613, 906
BtsCI	GGATG	2 cut(s)	601, 799
BtsIMutI	CAGTG	2 cut(s)	63, 113
BtuMI	TCGCGA	1 cut(s)	835
Cac8I	GCNNGC	8 cut(s)	165, 169, 495, 774, 1016, 1131, 1156, 1210
CfoI	GCGC	4 cut(s)	397, 407, 517, 539
Cfr10I	RCCGGY	4 cut(s)	167, 401, 878, 1208
ClaI	ATCGAT	1 cut(s)	1042
CseI	GACGC	1 cut(s)	252
Csp6I	GTAC	2 cut(s)	112, 477
CspAI	ACCGGT	1 cut(s)	878
CspCI	CAANNNNNGTGG	2 cut(s)	892, 927
CviAII	CATG	7 cut(s)	16, 484, 643, 707, 742, 1015, 1162
CviQI	GTAC	2 cut(s)	112, 477
DdeI	CTNAG	4 cut(s)	20, 25, 359, 815
DinI	GGCGCC	2 cut(s)	406, 538
DpnI	GATC	4 cut(s)	194, 423, 821, 1045
DpnII	GATC	4 cut(s)	192, 421, 819, 1043
DraIII	CACNNNGTG	1 cut(s)	727
DrdI	GACNNNNNNGTC	1 cut(s)	716
DriI	GACNNNNNGTC	3 cut(s)	139, 238, 882
DseDI	GACNNNNNNGTC	1 cut(s)	716
EaeI	YGGCCR	4 cut(s)	90, 595, 675, 847
EagI	CGGCCG	1 cut(s)	847
Eam1104I	CTCTTC	1 cut(s)	1113
Eam1105I	GACNNNNNGTC	3 cut(s)	139, 238, 882
EarI	CTCTTC	1 cut(s)	1113
EciI	GGCGGA	1 cut(s)	404
Ecl136II	GAGCTC	1 cut(s)	43
EclXI	CGGCCG	1 cut(s)	847
Eco130I	CCWWGG	2 cut(s)	777, 999
Eco147I	AGGCCT	3 cut(s)	776, 998, 1129
Eco24I	GRGCYC	3 cut(s)	45, 1234, 1303
Eco31I	GGTCTC	4 cut(s)	126, 242, 466, 869
Eco47I	GGWCC	5 cut(s)	579, 718, 864, 1262, 1476
Eco52I	CGGCCG	1 cut(s)	847
Eco53kI	GAGCTC	1 cut(s)	43
Eco57I	CTGAAG	2 cut(s)	503, 620
Eco88I	CYCGRG	4 cut(s)	429, 1093, 1202, 1233
EcoICRI	GAGCTC	1 cut(s)	43
EcoO109I	RGGNCCY	2 cut(s)	579, 1262
EcoRII	CCWGG	1 cut(s)	785
EcoT14I	CCWWGG	2 cut(s)	777, 999
EcoT38I	GRGCYC	3 cut(s)	45, 1234, 1303
EgeI	GGCGCC	2 cut(s)	406, 538
EheI	GGCGCC	2 cut(s)	406, 538
ErhI	CCWWGG	2 cut(s)	777, 999
Esp3I	CGTCTC	3 cut(s)	210, 893, 1131
FaeI	CATG	7 cut(s)	19, 487, 646, 710, 745, 1018, 1165
FaqI	GGGAC	3 cut(s)	565, 877, 1275
FatI	CATG	7 cut(s)	15, 483, 642, 706, 741, 1014, 1161
FauI	CCCGC	3 cut(s)	816, 833, 1163
FblI	GTMKAC	3 cut(s)	132, 299, 1191
Fnu4HI	GCNGC	9 cut(s)	58, 61, 223, 384, 387, 498, 621, 847, 1318
FokI	GGATG	2 cut(s)	588, 806
FriOI	GRGCYC	3 cut(s)	45, 1234, 1303
Fsp4HI	GCNGC	9 cut(s)	58, 61, 223, 384, 387, 498, 621, 847, 1318
FspBI	CTAG	1 cut(s)	530
GlaI	GCGC	4 cut(s)	396, 406, 516, 538
GluI	GCNGC	9 cut(s)	58, 61, 223, 384, 387, 498, 621, 847, 1318
GsaI	CCCAGC	1 cut(s)	1278
GsuI	CTGGAG	2 cut(s)	338, 1095
HaeII	RGCGCY	4 cut(s)	398, 408, 518, 540
HgaI	GACGC	1 cut(s)	252
HhaI	GCGC	4 cut(s)	397, 407, 517, 539
Hin1I	GRCGYC	3 cut(s)	287, 405, 537
Hin1II	CATG	7 cut(s)	19, 487, 646, 710, 745, 1018, 1165
Hin6I	GCGC	4 cut(s)	395, 405, 515, 537
HinP1I	GCGC	4 cut(s)	395, 405, 515, 537
HincII	GTYRAC	3 cut(s)	133, 300, 917
HindII	GTYRAC	3 cut(s)	133, 300, 917
HindIII	AAGCTT	2 cut(s)	1369, 1394
HinfI	GANTC	9 cut(s)	140, 197, 233, 347, 750, 947, 1052, 1166, 1196
HphI	GGTGA	3 cut(s)	445, 814, 1497
Hpy166II	GTNNAC	6 cut(s)	133, 300, 721, 730, 917, 1192
Hpy188I	TCNGA	7 cut(s)	153, 247, 572, 606, 816, 952, 1519
Hpy188III	TCNNGA	5 cut(s)	185, 638, 834, 1074, 1235
Hpy8I	GTNNAC	6 cut(s)	133, 300, 721, 730, 917, 1192
Hpy99I	CGWCG	8 cut(s)	134, 244, 289, 292, 295, 304, 610, 888
HpyAV	CCTTC	5 cut(s)	317, 346, 527, 784, 1034
HpyCH4III	ACNGT	7 cut(s)	476, 868, 921, 969, 1142, 1421, 1476
HpyCH4IV	ACGT	4 cut(s)	287, 306, 612, 905
HpyCH4V	TGCA	5 cut(s)	60, 370, 772, 1014, 1222
HpyF10VI	GCNNNNNNNGC	4 cut(s)	219, 392, 683, 846
HpyF3I	CTNAG	4 cut(s)	20, 25, 359, 815
HpySE526I	ACGT	4 cut(s)	287, 306, 612, 905
Hsp92I	GRCGYC	3 cut(s)	287, 405, 537
Hsp92II	CATG	7 cut(s)	19, 487, 646, 710, 745, 1018, 1165
HspAI	GCGC	4 cut(s)	395, 405, 515, 537
KasI	GGCGCC	2 cut(s)	404, 536
KflI	GGGWCCC	2 cut(s)	579, 1262
KroI	GCCGGC	2 cut(s)	167, 1208
KroNI	GCCGGC	2 cut(s)	169, 1210
Kzo9I	GATC	4 cut(s)	192, 421, 819, 1043
LmnI	GCTCC	5 cut(s)	34, 154, 589, 843, 1076
Lsp1109I	GCAGC	3 cut(s)	44, 72, 1304
LweI	GCATC	5 cut(s)	303, 341, 379, 759, 820
MaeI	CTAG	1 cut(s)	530
MaeII	ACGT	4 cut(s)	287, 306, 612, 905
MaeIII	GTNAC	4 cut(s)	9, 275, 307, 1102
MalI	GATC	4 cut(s)	194, 423, 821, 1045
MbiI	CCGCTC	1 cut(s)	846
MboI	GATC	4 cut(s)	192, 421, 819, 1043
MboII	GAAGA	2 cut(s)	1127, 1130
MflI	RGATCY	1 cut(s)	421
MhlI	GDGCHC	5 cut(s)	45, 594, 669, 1234, 1303
MluCI	AATT	1 cut(s)	1238
Mly113I	GGCGCC	2 cut(s)	405, 537
MlyI	GAGTC	5 cut(s)	149, 206, 227, 1160, 1190
MmeI	TCCRAC	3 cut(s)	629, 924, 1445
MreI	CGCCGGCG	1 cut(s)	167
MroNI	GCCGGC	2 cut(s)	167, 1208
MseI	TTAA	3 cut(s)	987, 1353, 1413
MspR9I	CCNGG	4 cut(s)	541, 787, 1049, 1229
MvaI	CCWGG	1 cut(s)	787
MvnI	CGCG	1 cut(s)	835
MwoI	GCNNNNNNNGC	4 cut(s)	219, 392, 683, 846
NaeI	GCCGGC	2 cut(s)	169, 1210
NarI	GGCGCC	2 cut(s)	405, 537
NciI	CCSGG	3 cut(s)	541, 1049, 1229
NdeII	GATC	4 cut(s)	192, 421, 819, 1043
NgoMIV	GCCGGC	2 cut(s)	167, 1208
NlaIII	CATG	7 cut(s)	19, 487, 646, 710, 745, 1018, 1165
NlaIV	GGNNCC	8 cut(s)	406, 538, 580, 581, 719, 865, 1263, 1264
NmeAIII	GCCGAG	2 cut(s)	239, 1163
NmuCI	GTSAC	1 cut(s)	307
NruI	TCGCGA	1 cut(s)	835
NspI	RCATGY	2 cut(s)	646, 1018
NspV	TTCGAA	1 cut(s)	350
PaeI	GCATGC	1 cut(s)	1018
PaeR7I	CTCGAG	2 cut(s)	1202, 1233
PceI	AGGCCT	3 cut(s)	776, 998, 1129
PciI	ACATGT	1 cut(s)	642
PcsI	WCGNNNNNNNCGW	4 cut(s)	192, 296, 308, 1200
PdiI	GCCGGC	2 cut(s)	169, 1210
PfeI	GAWTC	4 cut(s)	347, 750, 947, 1052
PflFI	GACNNNGTC	1 cut(s)	289
PflMI	CCANNNNNTGG	1 cut(s)	727
PfoI	TCCNGGA	1 cut(s)	785
PinAI	ACCGGT	1 cut(s)	878
PkrI	GCNGC	9 cut(s)	59, 62, 224, 385, 388, 499, 622, 848, 1319
PleI	GAGTC	5 cut(s)	148, 205, 227, 1160, 1190
PluTI	GGCGCC	2 cut(s)	408, 540
PpsI	GAGTC	5 cut(s)	148, 205, 227, 1160, 1190
PpuMI	RGGWCCY	2 cut(s)	579, 1262
PscI	ACATGT	1 cut(s)	642
Psp124BI	GAGCTC	1 cut(s)	45
Psp5II	RGGWCCY	2 cut(s)	579, 1262
Psp6I	CCWGG	1 cut(s)	785
PspFI	CCCAGC	1 cut(s)	1274
PspGI	CCWGG	1 cut(s)	785
PspN4I	GGNNCC	8 cut(s)	406, 538, 580, 581, 719, 865, 1263, 1264
PspPPI	RGGWCCY	2 cut(s)	579, 1262
PspXI	VCTCGAGB	1 cut(s)	1202
PstI	CTGCAG	1 cut(s)	62
PsuI	RGATCY	1 cut(s)	421
PsyI	GACNNNGTC	1 cut(s)	289
RruI	TCGCGA	1 cut(s)	835
RsaI	GTAC	2 cut(s)	113, 478
RsaNI	GTAC	2 cut(s)	112, 477
SacI	GAGCTC	1 cut(s)	45
SalI	GTCGAC	2 cut(s)	131, 298
SaqAI	TTAA	3 cut(s)	987, 1353, 1413
SatI	GCNGC	9 cut(s)	58, 61, 223, 384, 387, 498, 621, 847, 1318
Sau3AI	GATC	4 cut(s)	192, 421, 819, 1043
SchI	GAGTC	5 cut(s)	149, 206, 227, 1160, 1190
ScrFI	CCNGG	4 cut(s)	541, 787, 1049, 1229
SduI	GDGCHC	5 cut(s)	45, 594, 669, 1234, 1303
SfaNI	GCATC	5 cut(s)	303, 341, 379, 759, 820
SfcI	CTRYAG	1 cut(s)	58
SfiI	GGCCNNNNNGGCC	1 cut(s)	683
SfoI	GGCGCC	2 cut(s)	406, 538
Sfr274I	CTCGAG	2 cut(s)	1202, 1233
SfuI	TTCGAA	1 cut(s)	350
SgrAI	CRCCGGYG	1 cut(s)	167
SinI	GGWCC	5 cut(s)	579, 718, 864, 1262, 1476
SlaI	CTCGAG	2 cut(s)	1202, 1233
SmlI	CTYRAG	4 cut(s)	38, 449, 1202, 1233
SmoI	CTYRAG	4 cut(s)	38, 449, 1202, 1233
SphI	GCATGC	1 cut(s)	1018
Sse9I	AATT	1 cut(s)	1238
SseBI	AGGCCT	3 cut(s)	776, 998, 1129
SspDI	GGCGCC	2 cut(s)	404, 536
SspMI	CTAG	1 cut(s)	530
SstI	GAGCTC	1 cut(s)	45
StuI	AGGCCT	3 cut(s)	776, 998, 1129
StyD4I	CCNGG	4 cut(s)	539, 785, 1047, 1227
StyI	CCWWGG	2 cut(s)	777, 999
TaaI	ACNGT	7 cut(s)	476, 868, 921, 969, 1142, 1421, 1476
TaiI	ACGT	4 cut(s)	290, 309, 615, 908
TasI	AATT	1 cut(s)	1238
TauI	GCSGC	6 cut(s)	225, 386, 389, 500, 623, 849
TfiI	GAWTC	4 cut(s)	347, 750, 947, 1052
Tru1I	TTAA	3 cut(s)	987, 1353, 1413
Tru9I	TTAA	3 cut(s)	987, 1353, 1413
TscAI	CASTG	2 cut(s)	70, 113
TseFI	GTSAC	1 cut(s)	307
TseI	GCWGC	3 cut(s)	57, 60, 1317
Tsp45I	GTSAC	1 cut(s)	307
TspDTI	ATGAA	2 cut(s)	920, 1150
TspGWI	ACGGA	4 cut(s)	228, 317, 623, 1320
TspRI	CASTG	2 cut(s)	70, 113
Tth111I	GACNNNGTC	1 cut(s)	289
Van91I	CCANNNNNTGG	1 cut(s)	727
VpaK11BI	GGWCC	5 cut(s)	579, 718, 864, 1262, 1476
XceI	RCATGY	2 cut(s)	646, 1018
XhoI	CTCGAG	2 cut(s)	1202, 1233
XmiI	GTMKAC	3 cut(s)	132, 299, 1191
XspI	CTAG	1 cut(s)	530
ZraI	GACGTC	1 cut(s)	288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.