Rmu_sc0003191.1_g000008
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003191.1
OG0002674
Physical Location & Seq
Reverse (-)
38694 .. 45200
6507 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3333 bp
atggaatcatcgccgccgcacgaccgccggggcaagctcgtcgccggcccgaagtcgcggcccggcgagctcaagagcaacggggataagaagatcaagagagacagtgaagtggtggaggaggatcgccgctgcaatcgccgcgccggagcgtggcggtgcggcgaggcggcggcggttgggaagccgatgtgtcgacatcacttggcgcagagcaagagttaccaggagaggaagaaaaagagagagggaagcggagacagtgattccggcgaagaagacggacgtgaccggaaaatcaacgccggcggatcggagaataagaagaagaagaagaagaggaggaggaggacctcgagtgagtctgagtcggaatgttaccaggagaggaagaaaaagagagagggaagcggagacagtgattccggcgaagaagacggacgtgaccggaaaatcaacgccggcggatcggagaataagaagaagaagaagaggaggaggaggaccgcgagtgagtctgagtctgagtcggagtcggagtcggagcacaggtcgaggaatcggactgtgaaagcgaaggtgaatggtaaatctgcagattccggtagtgttatgaaggagagtaagctaaaagaggaaaagccaatggaagagggtaagtctaacaaaatcaaggggagcttgatgtgtcaccagtgtcagcggaacgataagagtggtgttgtacactgctctctgtgtaaatcaaagcggttttgctatgagtgcattgaaagatggtaccctgggaaatcaagagaggaatttgaggatgcttgcccattttgccgtggcaactgcaactgcaaagcgtgcctgcgcgagtttttggttaagccttgccgagaagttgagcccagtgttaagttacagcgactgcgttacctgttatacaaggctttgcctgtgctgaggcatatatatagtgagcagagctctgaactggagatagaagccaaaatcagaggtgtacacttgactgaactagacataaagagaactaaagtacaccaaaaggagcgaatgtactgtgacaattgttctacatctattgtggatttccacagaagctgtccaaaccccaattgttcctatgacctgtgtcttacttgttgcaaagagctaagggacggtcggcaacctggaggtaatgaaggagaaacatctcaccagcaagctctagaaagagctcataaagaagtgataggacattgctgggagagtaaagttgcctctacttcggatgattctaaagtggacccatccatttcttttcctaattggagagctaattctgatggcagtattccatgtcctccaaaagaacgtggaggttgtggcaatgggaagctggaattgaggcgtaaattcaaggctaattgggtaatgaagctgctaaaaaatgcagaagatgttactactgacttcaagtggcaagaagttgatatttctcaaggatgttcttggtgccagccaaatgattccgaggaaaccaatgataggaagcctgaaaggaggcaagcagctttcaggaaaaacagtcatgataacttcttatactgttcagatgctattgacatttcagatgatgagatcgagcattttcagaggcactggatgaaaggggaaccagtgattgtcagaaatgttcttgacaagacatctggtcttagttgggaacctatggttatgtggagggcttttagagaaacgggtgctaaagtaaagttcaaagaggagactaaaagtgtaaaagccattgattgcttggattggaatgaggttgagattaatattcaccaatttttcacgggctacttagcgggtcgcatgcataaagataagtggccagagatgttaaaattaaaggattggccatcatcaactttgtttgaggaacgcttgccaagacactgtgcggaattcattgcagcgctcccctacagtgactatactgatcccaaagattcaaatactggtattctcaatcttgctacaagacttcctgaagggtcgctgaaacctgatatgggaccaaaaacatacattgcttatggattctctgaagagcttggtagaggtgattcagtgactaagctgcactgtgatatgtctgatgcggtaaatgttctgacacacacagcaacagtgaagattgagccgtggcagcacaatgccataaagaatgtgaagagcaaacatgaagctgaagacctttgtgatctctacaatggaaaaaatcacaaaaagggcagggttagaggaacattgttgaagaaaactcgcaacgtcctggttaagggtgctgattcttctgaatatactaaaagtggtaaagttgtggagaatgaccatctagtgtcaactctgcaggatgggaagggaaacaaactggacagagcacaatcatgtagaacttcacttttgtcagattctgtcgatccaggcatccttagatttgatgaaacagaacatgttccggaccctcttgctactactgaactaaatgaagtaaaggttgcgagtgttggtcatcagaggaatgatgtgctaaaatccacctcgcctcgtgcaaatggagttgaaaaagagcaagagtgtgttcaatgttccagtgacatgatcagtggaaggcttgaagggaaagatgcttcaagggatgcaagtgtaaacacacatgcaacaaagtatttcaaaggtagtgacaagttggacattgtccatggtggtgctgtttgggacatctttcgtatccaggacactcccaagttaatagagtacctggagaaacacaaaaaagaatttcgccaccttaataatcatcctgtagattctgttgttcatcctattcatgatcagactctgtacttgaatgagagacataagaaacaactaaaggaggagttcgatgtggagccttggacatttgagcaacatcttggtgaggcagtttttattccagctggatgtcctcatcaagtgagaaatagacaatcttgtataaaggtagcacttgattttgtatctcctgagaatcttgaagtatgtctgcgattaactgaagagttccgtttactcccaaaaacccacagagccaaggaagataaattggaggtgaagaagatgacactctatgctgtaagttcagcacttcgagaagccaaaaatttgatgccggggcttggggagatgaaacatcagatggggaacgttggagaatggagtccccaatctgccaatacaggccttgcaaagttcttggcatctccacccatctccgattgcatgctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC WRC zf-4CXXC_R1

Protein Analysis

1110

Amino Acids

126.23

Weight (kDa)

8.74

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 924 - 1020 2.4e-15 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 780
AccB1I GGYRCC 2 cut(s) 780, 1506
AccI GTMKAC 1 cut(s) 196
AccII CGCG 4 cut(s) 58, 144, 509, 861
AccIII TCCGGA 1 cut(s) 2518
AclI AACGTT 1 cut(s) 3249
AclWI GGATC 5 cut(s) 132, 319, 475, 1991, 2474
AcoI YGGCCR 2 cut(s) 1886, 1913
AcsI RAATTY 5 cut(s) 803, 1406, 1961, 2840, 3205
AcuI CTGAAG 4 cut(s) 2067, 2124, 2268, 3120
AfaI GTAC 7 cut(s) 726, 782, 1011, 1047, 1067, 2819, 2906
AfeI AGCGCT 1 cut(s) 1974
AfiI CCNNNNNNNGG 5 cut(s) 153, 1539, 2069, 2338, 3221
AflIII ACRYGT 1 cut(s) 2512
AhdI GACNNNNNGTC 1 cut(s) 1704
AjiI CACGTC 2 cut(s) 287, 443
AjnI CCWGG 8 cut(s) 225, 381, 784, 1180, 2331, 2482, 2793, 2820
Alw21I GWGCWC 5 cut(s) 72, 549, 977, 1231, 2443
Alw26I GTCTC 5 cut(s) 96, 252, 408, 1772, 2911
AlwI GGATC 5 cut(s) 132, 319, 475, 1991, 2474
AlwNI CAGNNNCTG 4 cut(s) 916, 1110, 2474, 2902
Ama87I CYCGRG 1 cut(s) 355
Aor13HI TCCGGA 1 cut(s) 2518
Aor51HI AGCGCT 1 cut(s) 1974
AoxI GGCC 5 cut(s) 46, 59, 1886, 1913, 3283
ApeKI GCWGC 6 cut(s) 132, 1432, 1562, 1970, 2137, 2206
ApoI RAATTY 5 cut(s) 803, 1406, 1961, 2840, 3205
AseI ATTAAT 1 cut(s) 1830
Asp700I GAANNNNTTC 1 cut(s) 2514
Asp718I GGTACC 1 cut(s) 780
AspLEI GCGC 4 cut(s) 146, 211, 861, 1975
AspS9I GGNCC 7 cut(s) 47, 60, 351, 504, 1297, 2072, 2521
AsuC2I CCSGG 3 cut(s) 29, 63, 3216
AsuHPI GGTGA 7 cut(s) 592, 683, 1199, 1829, 2132, 2993, 3166
AvaI CYCGRG 1 cut(s) 355
AvaII GGWCC 5 cut(s) 351, 504, 1297, 2072, 2521
BalI TGGCCA 2 cut(s) 1888, 1915
BanI GGYRCC 2 cut(s) 780, 1506
BanII GRGCYC 4 cut(s) 72, 897, 977, 1231
BauI CACGAG 1 cut(s) 2607
BbsI GAAGAC 3 cut(s) 285, 441, 2256
Bbv12I GWGCWC 5 cut(s) 72, 549, 977, 1231, 2443
BbvCI CCTCAGC 1 cut(s) 950
BbvI GCAGC 6 cut(s) 119, 1419, 1574, 1982, 2124, 2218
BccI CCATC 8 cut(s) 771, 1309, 1331, 1924, 2400, 2408, 3235, 3320
BceAI ACGGC 2 cut(s) 813, 2185
BcgI CGANNNNNNTGC 2 cut(s) 22, 56
BciT130I CCWGG 8 cut(s) 227, 383, 786, 1182, 2333, 2484, 2795, 2822
BciVI GTATCC 1 cut(s) 2801
BclI TGATCA 2 cut(s) 2661, 2893
BcnI CCSGG 3 cut(s) 29, 63, 3216
BcoDI GTCTC 5 cut(s) 96, 252, 408, 1772, 2911
BfaI CTAG 3 cut(s) 1025, 1220, 2396
BfmI CTRYAG 4 cut(s) 594, 1981, 2408, 2865
BfoI RGCGCY 1 cut(s) 1976
BfuI GTATCC 1 cut(s) 2801
Bme18I GGWCC 5 cut(s) 351, 504, 1297, 2072, 2521
BmeRI GACNNNNNGTC 1 cut(s) 1704
BmeT110I CYCGRG 1 cut(s) 355
BmgBI CACGTC 2 cut(s) 287, 443
BmgT120I GGNCC 7 cut(s) 47, 60, 351, 504, 1297, 2072, 2521
BmiI GGNNCC 8 cut(s) 782, 1299, 1508, 1668, 1719, 2073, 2523, 2955
BmrI ACTGGG 1 cut(s) 891
BmsI GCATC 8 cut(s) 802, 1597, 2146, 2496, 2677, 2689, 3201, 3311
BmuI ACTGGG 1 cut(s) 891
BoxI GACNNNNGTC 1 cut(s) 1140
BpiI GAAGAC 3 cut(s) 285, 441, 2256
BplI GAGNNNNNCTC 2 cut(s) 959, 991
BpmI CTGGAG 3 cut(s) 1004, 1203, 2843
Bpu10I CCTNAGC 2 cut(s) 950, 1163
BpuEI CTTGAG 2 cut(s) 56, 1476
BpuMI CCSGG 3 cut(s) 29, 63, 3216
BsaWI WCCGGW 4 cut(s) 291, 447, 602, 2518
BsaXI ACNNNNNCTCC 6 cut(s) 524, 536, 554, 566, 1049, 1079
Bsc4I CCNNNNNNNGG 5 cut(s) 153, 1539, 2069, 2338, 3221
Bse118I RCCGGY 3 cut(s) 44, 305, 461
Bse1I ACTGG 8 cut(s) 694, 897, 987, 1658, 1670, 2020, 2436, 2652
Bse3DI GCAATG 4 cut(s) 1249, 1387, 1965, 2085
BseAI TCCGGA 1 cut(s) 2518
BseBI CCWGG 8 cut(s) 227, 383, 786, 1182, 2333, 2484, 2795, 2822
BseLI CCNNNNNNNGG 5 cut(s) 153, 1539, 2069, 2338, 3221
BseMI GCAATG 4 cut(s) 1249, 1387, 1965, 2085
BseMII CTCAG 5 cut(s) 357, 510, 516, 941, 3060
BseNI ACTGG 8 cut(s) 694, 897, 987, 1658, 1670, 2020, 2436, 2652
BseRI GAGGAG 9 cut(s) 134, 355, 358, 361, 508, 511, 514, 1790, 2954
BseXI GCAGC 6 cut(s) 119, 1419, 1574, 1982, 2124, 2218
BseYI CCCAGC 1 cut(s) 1254
BsgI GTGCAG 1 cut(s) 2123
Bsh1236I CGCG 4 cut(s) 58, 144, 509, 861
Bsh1285I CGRYCG 2 cut(s) 25, 1174
BshFI GGCC 5 cut(s) 48, 61, 1888, 1915, 3285
BshNI GGYRCC 2 cut(s) 780, 1506
BsiEI CGRYCG 2 cut(s) 25, 1174
BsiHKAI GWGCWC 5 cut(s) 72, 549, 977, 1231, 2443
BsiHKCI CYCGRG 1 cut(s) 355
BslFI GGGAC 4 cut(s) 1181, 2085, 2792, 3249
BslI CCNNNNNNNGG 5 cut(s) 153, 1539, 2069, 2338, 3221
BsmAI GTCTC 5 cut(s) 96, 252, 408, 1772, 2911
BsmFI GGGAC 4 cut(s) 1181, 2085, 2792, 3249
BsnI GGCC 5 cut(s) 48, 61, 1888, 1915, 3285
BsoBI CYCGRG 1 cut(s) 355
Bsp1286I GDGCHC 6 cut(s) 72, 549, 897, 977, 1231, 2443
Bsp13I TCCGGA 1 cut(s) 2518
Bsp1407I TGTACA 2 cut(s) 724, 1009
Bsp19I CCATGG 1 cut(s) 2761
BspANI GGCC 5 cut(s) 48, 61, 1888, 1915, 3285
BspCNI CTCAG 5 cut(s) 358, 511, 517, 942, 3061
BspEI TCCGGA 1 cut(s) 2518
BspFNI CGCG 4 cut(s) 58, 144, 509, 861
BspHI TCATGA 2 cut(s) 1582, 2890
BspLI GGNNCC 8 cut(s) 782, 1299, 1508, 1668, 1719, 2073, 2523, 2955
BspMAI CTGCAG 2 cut(s) 598, 2412
BspPI GGATC 5 cut(s) 132, 319, 475, 1991, 2474
BspQI GCTCTTC 2 cut(s) 2100, 2225
BspT107I GGYRCC 2 cut(s) 780, 1506
BsrDI GCAATG 4 cut(s) 1249, 1387, 1965, 2085
BsrFI RCCGGY 3 cut(s) 44, 305, 461
BsrGI TGTACA 2 cut(s) 724, 1009
BsrI ACTGG 8 cut(s) 694, 897, 987, 1658, 1670, 2020, 2436, 2652
BssAI RCCGGY 3 cut(s) 44, 305, 461
BssSI CACGAG 1 cut(s) 2607
BssT1I CCWWGG 3 cut(s) 2761, 2957, 3135
Bst2BI CACGAG 1 cut(s) 2607
Bst2UI CCWGG 8 cut(s) 227, 383, 786, 1182, 2333, 2484, 2795, 2822
Bst6I CTCTTC 6 cut(s) 332, 485, 645, 2100, 2225, 3096
BstAPI GCANNNNNTGC 1 cut(s) 852
BstAUI TGTACA 2 cut(s) 724, 1009
BstDSI CCRYGG 3 cut(s) 829, 2201, 2761
BstENI CCTNNNNNAGG 1 cut(s) 2336
BstFNI CGCG 4 cut(s) 58, 144, 509, 861
BstH2I RGCGCY 1 cut(s) 1976
BstHHI GCGC 4 cut(s) 146, 211, 861, 1975
BstMAI GTCTC 5 cut(s) 96, 252, 408, 1772, 2911
BstMCI CGRYCG 2 cut(s) 25, 1174
BstMWI GCNNNNNNNGC 7 cut(s) 67, 138, 141, 765, 825, 852, 2206
BstNI CCWGG 8 cut(s) 227, 383, 786, 1182, 2333, 2484, 2795, 2822
BstNSI RCATGY 4 cut(s) 1873, 2516, 2720, 3328
BstPAI GACNNNNGTC 1 cut(s) 1140
BstSFI CTRYAG 4 cut(s) 594, 1981, 2408, 2865
BstUI CGCG 4 cut(s) 58, 144, 509, 861
BstV1I GCAGC 6 cut(s) 119, 1419, 1574, 1982, 2124, 2218
BstV2I GAAGAC 3 cut(s) 285, 441, 2256
BsuI GTATCC 1 cut(s) 2801
BsuRI GGCC 5 cut(s) 48, 61, 1888, 1915, 3285
BtgI CCRYGG 3 cut(s) 829, 2201, 2761
BtrI CACGTC 2 cut(s) 287, 443
BtsI GCAGTG 1 cut(s) 727
CaiI CAGNNNCTG 4 cut(s) 916, 1110, 2474, 2902
CciI TCATGA 2 cut(s) 1582, 2890
CfoI GCGC 4 cut(s) 146, 211, 861, 1975
Cfr10I RCCGGY 3 cut(s) 44, 305, 461
Cfr13I GGNCC 7 cut(s) 47, 60, 351, 504, 1297, 2072, 2521
Csp6I GTAC 7 cut(s) 725, 781, 1010, 1046, 1066, 2818, 2905
CviQI GTAC 7 cut(s) 725, 781, 1010, 1046, 1066, 2818, 2905
DriI GACNNNNNGTC 1 cut(s) 1704
EaeI YGGCCR 2 cut(s) 1886, 1913
Eam1104I CTCTTC 6 cut(s) 332, 485, 645, 2100, 2225, 3096
Eam1105I GACNNNNNGTC 1 cut(s) 1704
EarI CTCTTC 6 cut(s) 332, 485, 645, 2100, 2225, 3096
EciI GGCGGA 2 cut(s) 324, 480
Ecl136II GAGCTC 3 cut(s) 70, 975, 1229
Eco130I CCWWGG 3 cut(s) 2761, 2957, 3135
Eco147I AGGCCT 1 cut(s) 3285
Eco24I GRGCYC 4 cut(s) 72, 897, 977, 1231
Eco47I GGWCC 5 cut(s) 351, 504, 1297, 2072, 2521
Eco47III AGCGCT 1 cut(s) 1974
Eco53kI GAGCTC 3 cut(s) 70, 975, 1229
Eco57I CTGAAG 4 cut(s) 2067, 2124, 2268, 3120
Eco88I CYCGRG 1 cut(s) 355
EcoICRI GAGCTC 3 cut(s) 70, 975, 1229
EcoNI CCTNNNNNAGG 1 cut(s) 2336
EcoO109I RGGNCCY 1 cut(s) 351
EcoRI GAATTC 1 cut(s) 1961
EcoRII CCWGG 8 cut(s) 225, 381, 784, 1180, 2331, 2482, 2793, 2820
EcoT14I CCWWGG 3 cut(s) 2761, 2957, 3135
EcoT22I ATGCAT 1 cut(s) 1875
EcoT38I GRGCYC 4 cut(s) 72, 897, 977, 1231
ErhI CCWWGG 3 cut(s) 2761, 2957, 3135
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FaqI GGGAC 4 cut(s) 1181, 2085, 2792, 3249
FauI CCCGC 1 cut(s) 1855
FbaI TGATCA 2 cut(s) 2661, 2893
FblI GTMKAC 1 cut(s) 196
FriOI GRGCYC 4 cut(s) 72, 897, 977, 1231
FspBI CTAG 3 cut(s) 1025, 1220, 2396
GlaI GCGC 4 cut(s) 145, 210, 860, 1974
GsaI CCCAGC 1 cut(s) 1258
GsuI CTGGAG 3 cut(s) 1004, 1203, 2843
HaeII RGCGCY 1 cut(s) 1976
HaeIII GGCC 5 cut(s) 48, 61, 1888, 1915, 3285
HhaI GCGC 4 cut(s) 146, 211, 861, 1975
Hin6I GCGC 4 cut(s) 144, 209, 859, 1973
HinP1I GCGC 4 cut(s) 144, 209, 859, 1973
HincII GTYRAC 2 cut(s) 197, 2403
HindII GTYRAC 2 cut(s) 197, 2403
HphI GGTGA 7 cut(s) 592, 683, 1199, 1829, 2132, 2993, 3166
Hpy166II GTNNAC 9 cut(s) 197, 727, 1010, 1012, 1048, 1297, 2403, 2710, 3113
Hpy8I GTNNAC 9 cut(s) 197, 727, 1010, 1012, 1048, 1297, 2403, 2710, 3113
Hpy99I CGWCG 1 cut(s) 44
HpyAV CCTTC 7 cut(s) 571, 610, 1187, 2042, 2413, 2664, 2672
HpyCH4IV ACGT 5 cut(s) 286, 442, 1366, 2328, 3249
HpyF10VI GCNNNNNNNGC 7 cut(s) 67, 138, 141, 765, 825, 852, 2206
HpySE526I ACGT 5 cut(s) 286, 442, 1366, 2328, 3249
HspAI GCGC 4 cut(s) 144, 209, 859, 1973
Kpn2I TCCGGA 1 cut(s) 2518
KpnI GGTACC 1 cut(s) 784
KroI GCCGGC 3 cut(s) 44, 305, 461
KroNI GCCGGC 3 cut(s) 46, 307, 463
Ksp22I TGATCA 2 cut(s) 2661, 2893
LguI GCTCTTC 2 cut(s) 2100, 2225
LmnI GCTCC 6 cut(s) 149, 544, 678, 1057, 1980, 2953
Lsp1109I GCAGC 6 cut(s) 119, 1419, 1574, 1982, 2124, 2218
LweI GCATC 8 cut(s) 802, 1597, 2146, 2496, 2677, 2689, 3201, 3311
MaeI CTAG 3 cut(s) 1025, 1220, 2396
MaeII ACGT 5 cut(s) 286, 442, 1366, 2328, 3249
MfeI CAATTG 2 cut(s) 1075, 1123
MhlI GDGCHC 6 cut(s) 72, 549, 897, 977, 1231, 2443
MlsI TGGCCA 2 cut(s) 1888, 1915
MluNI TGGCCA 2 cut(s) 1888, 1915
MlyI GAGTC 9 cut(s) 371, 377, 524, 530, 536, 542, 548, 2893, 3271
MmeI TCCRAC 6 cut(s) 351, 510, 516, 522, 2730, 3232
Mox20I TGGCCA 2 cut(s) 1888, 1915
Mph1103I ATGCAT 1 cut(s) 1875
MreI CGCCGGCG 2 cut(s) 305, 461
MroI TCCGGA 1 cut(s) 2518
MroNI GCCGGC 3 cut(s) 44, 305, 461
MroXI GAANNNNTTC 1 cut(s) 2514
MscI TGGCCA 2 cut(s) 1888, 1915
MseI TTAA 9 cut(s) 873, 903, 1830, 1898, 1904, 2337, 2810, 2853, 3095
MslI CAYNNNNRTG 3 cut(s) 2446, 2766, 2979
Msp20I TGGCCA 2 cut(s) 1888, 1915
MspA1I CMGCKG 3 cut(s) 132, 703, 3002
MunI CAATTG 2 cut(s) 1075, 1123
MvaI CCWGG 8 cut(s) 227, 383, 786, 1182, 2333, 2484, 2795, 2822
MvnI CGCG 4 cut(s) 58, 144, 509, 861
MwoI GCNNNNNNNGC 7 cut(s) 67, 138, 141, 765, 825, 852, 2206
NaeI GCCGGC 3 cut(s) 46, 307, 463
NciI CCSGG 3 cut(s) 29, 63, 3216
NcoI CCATGG 1 cut(s) 2761
NgoMIV GCCGGC 3 cut(s) 44, 305, 461
NlaIV GGNNCC 8 cut(s) 782, 1299, 1508, 1668, 1719, 2073, 2523, 2955
NmeAIII GCCGAG 1 cut(s) 908
NmuCI GTSAC 8 cut(s) 287, 443, 689, 1070, 1985, 2128, 2654, 2741
NsiI ATGCAT 1 cut(s) 1875
NspI RCATGY 4 cut(s) 1873, 2516, 2720, 3328
PaeI GCATGC 2 cut(s) 1873, 3328
PaeR7I CTCGAG 1 cut(s) 355
PagI TCATGA 2 cut(s) 1582, 2890
PasI CCCWGGG 1 cut(s) 785
PceI AGGCCT 1 cut(s) 3285
PciI ACATGT 1 cut(s) 2512
PciSI GCTCTTC 2 cut(s) 2100, 2225
PdiI GCCGGC 3 cut(s) 46, 307, 463
PdmI GAANNNNTTC 1 cut(s) 2514
PflFI GACNNNGTC 1 cut(s) 2756
PfoI TCCNGGA 1 cut(s) 2793
PleI GAGTC 9 cut(s) 370, 376, 523, 529, 535, 541, 547, 2893, 3270
PpsI GAGTC 9 cut(s) 370, 376, 523, 529, 535, 541, 547, 2893, 3270
PpuMI RGGWCCY 1 cut(s) 351
PscI ACATGT 1 cut(s) 2512
PshAI GACNNNNGTC 1 cut(s) 1140
PshBI ATTAAT 1 cut(s) 1830
Psp124BI GAGCTC 3 cut(s) 72, 977, 1231
Psp1406I AACGTT 1 cut(s) 3249
Psp5II RGGWCCY 1 cut(s) 351
Psp6I CCWGG 8 cut(s) 225, 381, 784, 1180, 2331, 2482, 2793, 2820
PspFI CCCAGC 1 cut(s) 1254
PspGI CCWGG 8 cut(s) 225, 381, 784, 1180, 2331, 2482, 2793, 2820
PspN4I GGNNCC 8 cut(s) 782, 1299, 1508, 1668, 1719, 2073, 2523, 2955
PspPI GGNCC 7 cut(s) 47, 60, 351, 504, 1297, 2072, 2521
PspPPI RGGWCCY 1 cut(s) 351
PspXI VCTCGAGB 1 cut(s) 355
PstI CTGCAG 2 cut(s) 598, 2412
PstNI CAGNNNCTG 4 cut(s) 916, 1110, 2474, 2902
PsyI GACNNNGTC 1 cut(s) 2756
PvuII CAGCTG 1 cut(s) 3002
RsaI GTAC 7 cut(s) 726, 782, 1011, 1047, 1067, 2819, 2906
RsaNI GTAC 7 cut(s) 725, 781, 1010, 1046, 1066, 2818, 2905
RseI CAYNNNNRTG 3 cut(s) 2446, 2766, 2979
SacI GAGCTC 3 cut(s) 72, 977, 1231
SalI GTCGAC 1 cut(s) 195
SapI GCTCTTC 2 cut(s) 2100, 2225
SaqAI TTAA 9 cut(s) 873, 903, 1830, 1898, 1904, 2337, 2810, 2853, 3095
Sau96I GGNCC 7 cut(s) 47, 60, 351, 504, 1297, 2072, 2521
SchI GAGTC 9 cut(s) 371, 377, 524, 530, 536, 542, 548, 2893, 3271
SduI GDGCHC 6 cut(s) 72, 549, 897, 977, 1231, 2443
SfaNI GCATC 8 cut(s) 802, 1597, 2146, 2496, 2677, 2689, 3201, 3311
SfcI CTRYAG 4 cut(s) 594, 1981, 2408, 2865
Sfr274I CTCGAG 1 cut(s) 355
SgrAI CRCCGGYG 2 cut(s) 305, 461
SinI GGWCC 5 cut(s) 351, 504, 1297, 2072, 2521
SlaI CTCGAG 1 cut(s) 355
SmiMI CAYNNNNRTG 3 cut(s) 2446, 2766, 2979
SmlI CTYRAG 3 cut(s) 71, 355, 1491
SmoI CTYRAG 3 cut(s) 71, 355, 1491
SphI GCATGC 2 cut(s) 1873, 3328
SseBI AGGCCT 1 cut(s) 3285
SspI AATATT 1 cut(s) 1834
SspMI CTAG 3 cut(s) 1025, 1220, 2396
SstI GAGCTC 3 cut(s) 72, 977, 1231
StuI AGGCCT 1 cut(s) 3285
StyI CCWWGG 3 cut(s) 2761, 2957, 3135
TaiI ACGT 5 cut(s) 289, 445, 1369, 2331, 3252
TaqI TCGA 7 cut(s) 196, 356, 554, 1635, 2478, 2946, 3193
TatI WGTACW 5 cut(s) 724, 1009, 1045, 1065, 2904
TauI GCSGC 8 cut(s) 16, 19, 61, 132, 144, 165, 173, 176
Tru1I TTAA 9 cut(s) 873, 903, 1830, 1898, 1904, 2337, 2810, 2853, 3095
Tru9I TTAA 9 cut(s) 873, 903, 1830, 1898, 1904, 2337, 2810, 2853, 3095
TseFI GTSAC 8 cut(s) 287, 443, 689, 1070, 1985, 2128, 2654, 2741
TseI GCWGC 6 cut(s) 132, 1432, 1562, 1970, 2137, 2206
Tsp45I GTSAC 8 cut(s) 287, 443, 689, 1070, 1985, 2128, 2654, 2741
TspGWI ACGGA 3 cut(s) 297, 453, 3098
Tth111I GACNNNGTC 1 cut(s) 2756
VpaK11BI GGWCC 5 cut(s) 351, 504, 1297, 2072, 2521
VspI ATTAAT 1 cut(s) 1830
XagI CCTNNNNNAGG 1 cut(s) 2336
XapI RAATTY 5 cut(s) 803, 1406, 1961, 2840, 3205
XbaI TCTAGA 1 cut(s) 1219
XceI RCATGY 4 cut(s) 1873, 2516, 2720, 3328
XcmI CCANNNNNNNNNTGG 1 cut(s) 1804
XhoI CTCGAG 1 cut(s) 355
XmiI GTMKAC 1 cut(s) 196
XmnI GAANNNNTTC 1 cut(s) 2514
XspI CTAG 3 cut(s) 1025, 1220, 2396
Zsp2I ATGCAT 1 cut(s) 1875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.