Rmu_sc0003483.1_g000004

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003483.1
Physical Location & Seq
Forward (+)
18852 .. 19082
231 bp
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UTR
Exon/CDS
Intron
Rmu_sc0003483.1_g000004.1.cds

Sequence Viewer

Length: 231 bp
atgccgccgaaagccgatctggaccgtcagatcgaccacctgatgcagtgcaagcctctgacggaggcggaggtgaagacgctatgtgagcaagcgaggacgatcctcgcccaggagtggaatgtgcaaattgtcaagtgtccggtcaccgtctgtggcgacatccacggccagtttcatgaccttcttttctccctcccgatctgctctttctctcgcaccgtgcgttga

Protein Analysis

76

Amino Acids

8.66

Weight (kDa)

6.24

Isoelectric Point (pI)

31.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 68
AclWI GGATC 1 cut(s) 97
AcoI YGGCCR 1 cut(s) 169
AfiI CCNNNNNNNGG 2 cut(s) 112, 117
AjnI CCWGG 1 cut(s) 111
AlwI GGATC 1 cut(s) 97
AoxI GGCC 1 cut(s) 169
AspS9I GGNCC 1 cut(s) 22
AsuHPI GGTGA 2 cut(s) 85, 139
AvaII GGWCC 1 cut(s) 22
BbsI GAAGAC 1 cut(s) 83
BceAI ACGGC 1 cut(s) 184
BciT130I CCWGG 1 cut(s) 113
BisI GCNGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 6
Bme1390I CCNGG 1 cut(s) 113
Bme18I GGWCC 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 22
BmrFI CCNGG 1 cut(s) 113
BmsI GCATC 1 cut(s) 33
BpiI GAAGAC 1 cut(s) 83
BsaJI CCNNGG 2 cut(s) 111, 166
BsaWI WCCGGW 1 cut(s) 142
Bsc4I CCNNNNNNNGG 2 cut(s) 112, 117
Bse1I ACTGG 1 cut(s) 172
BseBI CCWGG 1 cut(s) 113
BseDI CCNNGG 2 cut(s) 111, 166
BseGI GGATG 1 cut(s) 162
BseLI CCNNNNNNNGG 2 cut(s) 112, 117
BseNI ACTGG 1 cut(s) 172
BshFI GGCC 1 cut(s) 171
BsiSI CCGG 1 cut(s) 143
BslI CCNNNNNNNGG 2 cut(s) 112, 117
BsnI GGCC 1 cut(s) 171
Bsp143I GATC 4 cut(s) 16, 30, 102, 201
BspACI CCGC 2 cut(s) 5, 68
BspANI GGCC 1 cut(s) 171
BspHI TCATGA 1 cut(s) 178
BspPI GGATC 1 cut(s) 97
BsrI ACTGG 1 cut(s) 172
BssECI CCNNGG 2 cut(s) 111, 166
BssMI GATC 4 cut(s) 16, 30, 102, 201
Bst2UI CCWGG 1 cut(s) 113
Bst4CI ACNGT 3 cut(s) 26, 151, 223
BstC8I GCNNGC 2 cut(s) 53, 93
BstDSI CCRYGG 1 cut(s) 166
BstEII GGTNACC 1 cut(s) 145
BstENI CCTNNNNNAGG 1 cut(s) 110
BstF5I GGATG 1 cut(s) 162
BstKTI GATC 4 cut(s) 19, 33, 105, 204
BstMBI GATC 4 cut(s) 16, 30, 102, 201
BstMWI GCNNNNNNNGC 2 cut(s) 52, 88
BstNI CCWGG 1 cut(s) 113
BstPI GGTNACC 1 cut(s) 145
BstSCI CCNGG 1 cut(s) 111
BstV2I GAAGAC 1 cut(s) 83
BsuRI GGCC 1 cut(s) 171
BtgI CCRYGG 1 cut(s) 166
BtsCI GGATG 1 cut(s) 162
BtsI GCAGTG 1 cut(s) 53
BtsIMutI CAGTG 1 cut(s) 53
Cac8I GCNNGC 2 cut(s) 53, 93
CciI TCATGA 1 cut(s) 178
Cfr13I GGNCC 1 cut(s) 22
CseI GACGC 1 cut(s) 88
CviAII CATG 1 cut(s) 179
CviJI RGCY 3 cut(s) 14, 55, 171
CviKI_1 RGCY 3 cut(s) 14, 55, 171
DpnI GATC 4 cut(s) 18, 32, 104, 203
DpnII GATC 4 cut(s) 16, 30, 102, 201
EaeI YGGCCR 1 cut(s) 169
EciI GGCGGA 1 cut(s) 83
Eco47I GGWCC 1 cut(s) 22
Eco91I GGTNACC 1 cut(s) 145
EcoNI CCTNNNNNAGG 1 cut(s) 110
EcoO65I GGTNACC 1 cut(s) 145
EcoRII CCWGG 1 cut(s) 111
FaeI CATG 1 cut(s) 182
FaiI YATR 2 cut(s) 85, 180
FatI CATG 1 cut(s) 178
Fnu4HI GCNGC 1 cut(s) 5
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 1 cut(s) 5
GluI GCNGC 1 cut(s) 5
HaeIII GGCC 1 cut(s) 171
HapII CCGG 1 cut(s) 143
HgaI GACGC 1 cut(s) 88
Hin1II CATG 1 cut(s) 182
HpaII CCGG 1 cut(s) 143
HphI GGTGA 2 cut(s) 85, 139
Hpy188I TCNGA 2 cut(s) 30, 60
Hpy188III TCNNGA 3 cut(s) 20, 179, 199
HpyAV CCTTC 1 cut(s) 194
HpyCH4III ACNGT 3 cut(s) 26, 151, 223
HpyCH4V TGCA 3 cut(s) 46, 51, 127
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 88
Hsp92II CATG 1 cut(s) 182
Kzo9I GATC 4 cut(s) 16, 30, 102, 201
LpnPI CCDG 6 cut(s) 5, 53, 98, 125, 156, 185
LweI GCATC 1 cut(s) 33
MaeIII GTNAC 1 cut(s) 145
MalI GATC 4 cut(s) 18, 32, 104, 203
MboI GATC 4 cut(s) 16, 30, 102, 201
MboII GAAGA 1 cut(s) 88
MluCI AATT 1 cut(s) 129
MnlI CCTC 6 cut(s) 58, 64, 66, 90, 116, 206
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 1 cut(s) 113
MvaI CCWGG 1 cut(s) 113
MwoI GCNNNNNNNGC 2 cut(s) 52, 88
NdeII GATC 4 cut(s) 16, 30, 102, 201
NlaIII CATG 1 cut(s) 182
NmuCI GTSAC 1 cut(s) 145
PagI TCATGA 1 cut(s) 178
PcsI WCGNNNNNNNCGW 1 cut(s) 223
PkrI GCNGC 1 cut(s) 6
Psp6I CCWGG 1 cut(s) 111
PspEI GGTNACC 1 cut(s) 145
PspGI CCWGG 1 cut(s) 111
PspPI GGNCC 1 cut(s) 22
SatI GCNGC 1 cut(s) 5
Sau3AI GATC 4 cut(s) 16, 30, 102, 201
Sau96I GGNCC 1 cut(s) 22
ScrFI CCNGG 1 cut(s) 113
SetI ASST 3 cut(s) 42, 75, 186
SfaNI GCATC 1 cut(s) 33
SinI GGWCC 1 cut(s) 22
Sse9I AATT 1 cut(s) 129
SsiI CCGC 2 cut(s) 5, 68
StyD4I CCNGG 1 cut(s) 111
TaaI ACNGT 3 cut(s) 26, 151, 223
TaqI TCGA 1 cut(s) 33
TasI AATT 1 cut(s) 129
TauI GCSGC 1 cut(s) 7
TscAI CASTG 1 cut(s) 53
TseFI GTSAC 1 cut(s) 145
Tsp45I GTSAC 1 cut(s) 145
TspDTI ATGAA 1 cut(s) 167
TspGWI ACGGA 1 cut(s) 77
TspRI CASTG 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 22
XagI CCTNNNNNAGG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.