Rh5DG252800

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
29169784 .. 29173332
3549 bp
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UTR
Exon/CDS
Intron
Rh5DG252800.1

Sequence Viewer

Length: 207 bp
ATGCCATCTCACGGGGATCTGGAATGTCAGATGGAGCATCTGACGGAGTGCAAGAAGTTGCCAGAAGTGGAGGCGAAGACACTGTGCAAGCAAGAGCGCGACCTGTTAACTAGACATGAAGAACTACTTCACAAGATCGGGAGTTGGAATTGCTTTTTGCGGGGCTGTCTCTATGAACTGAACCTTTCAAGGCAGTGTTGTAGCTGA

Protein Analysis

68

Amino Acids

7.98

Weight (kDa)

6.04

Isoelectric Point (pI)

60.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 99
AciI CCGC 1 cut(s) 160
AclWI GGATC 1 cut(s) 24
AfiI CCNNNNNNNGG 1 cut(s) 11
AgsI TTSAA 1 cut(s) 189
AluBI AGCT 1 cut(s) 204
AluI AGCT 1 cut(s) 204
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 1 cut(s) 24
Asp700I GAANNNNTTC 1 cut(s) 126
AspLEI GCGC 1 cut(s) 99
BbsI GAAGAC 1 cut(s) 83
BccI CCATC 2 cut(s) 13, 25
BcoDI GTCTC 1 cut(s) 173
BfaI CTAG 1 cut(s) 111
BmsI GCATC 1 cut(s) 46
BpiI GAAGAC 1 cut(s) 83
Bsc4I CCNNNNNNNGG 1 cut(s) 11
BseLI CCNNNNNNNGG 1 cut(s) 11
Bsh1236I CGCG 1 cut(s) 99
BslI CCNNNNNNNGG 1 cut(s) 11
BsmAI GTCTC 1 cut(s) 173
Bsp143I GATC 2 cut(s) 16, 135
BspACI CCGC 1 cut(s) 160
BspFNI CGCG 1 cut(s) 99
BspPI GGATC 1 cut(s) 24
BssMI GATC 2 cut(s) 16, 135
Bst4CI ACNGT 1 cut(s) 84
BstC8I GCNNGC 1 cut(s) 89
BstFNI CGCG 1 cut(s) 99
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 2 cut(s) 19, 138
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 2 cut(s) 16, 135
BstUI CGCG 1 cut(s) 99
BstV2I GAAGAC 1 cut(s) 83
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BtsI GCAGTG 1 cut(s) 200
BtsIMutI CAGTG 2 cut(s) 80, 200
Cac8I GCNNGC 1 cut(s) 89
CfoI GCGC 1 cut(s) 99
CviAII CATG 1 cut(s) 116
CviJI RGCY 2 cut(s) 165, 204
CviKI_1 RGCY 2 cut(s) 165, 204
DpnI GATC 2 cut(s) 18, 137
DpnII GATC 2 cut(s) 16, 135
FaeI CATG 1 cut(s) 119
FaiI YATR 2 cut(s) 117, 174
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FatI CATG 1 cut(s) 115
FauI CCCGC 1 cut(s) 153
FspBI CTAG 1 cut(s) 111
GlaI GCGC 1 cut(s) 98
HhaI GCGC 1 cut(s) 99
Hin1II CATG 1 cut(s) 119
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 108
HindII GTYRAC 1 cut(s) 108
HpaI GTTAAC 1 cut(s) 108
Hpy166II GTNNAC 1 cut(s) 108
Hpy188I TCNGA 2 cut(s) 30, 42
Hpy188III TCNNGA 2 cut(s) 20, 139
Hpy8I GTNNAC 1 cut(s) 108
HpyCH4III ACNGT 1 cut(s) 84
HpyCH4V TGCA 2 cut(s) 51, 87
Hsp92II CATG 1 cut(s) 119
HspAI GCGC 1 cut(s) 97
KspAI GTTAAC 1 cut(s) 108
Kzo9I GATC 2 cut(s) 16, 135
LmnI GCTCC 1 cut(s) 34
LpnPI CCDG 3 cut(s) 5, 75, 116
LweI GCATC 1 cut(s) 46
MaeI CTAG 1 cut(s) 111
MalI GATC 2 cut(s) 18, 137
MboI GATC 2 cut(s) 16, 135
MboII GAAGA 2 cut(s) 88, 131
MflI RGATCY 1 cut(s) 16
MluCI AATT 1 cut(s) 148
MmeI TCCRAC 1 cut(s) 125
MnlI CCTC 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 126
MseI TTAA 1 cut(s) 107
MvnI CGCG 1 cut(s) 99
NdeII GATC 2 cut(s) 16, 135
NlaIII CATG 1 cut(s) 119
PdmI GAANNNNTTC 1 cut(s) 126
PsuI RGATCY 1 cut(s) 16
SaqAI TTAA 1 cut(s) 107
Sau3AI GATC 2 cut(s) 16, 135
SetI ASST 3 cut(s) 105, 186, 206
SfaNI GCATC 1 cut(s) 46
Sse9I AATT 1 cut(s) 148
SsiI CCGC 1 cut(s) 160
SspMI CTAG 1 cut(s) 111
TaaI ACNGT 1 cut(s) 84
TasI AATT 1 cut(s) 148
Tru1I TTAA 1 cut(s) 107
Tru9I TTAA 1 cut(s) 107
TscAI CASTG 2 cut(s) 87, 200
TspDTI ATGAA 2 cut(s) 132, 189
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 2 cut(s) 87, 200
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.