Rmu_sc0042936.1_g000001

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0042936.1
Physical Location & Seq
Reverse (-)
2 .. 309
308 bp
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UTR
Exon/CDS
Intron
Rmu_sc0042936.1_g000001.1.cds

Sequence Viewer

Length: 207 bp
atgccgccgaaagccgatttggaccgtcagatcgaccacctgatgcagtgcaagcctctgacggaggcggaggtgaagacgctatgtgagcaagcaaggacgatcctcgcccaggagtggaatgtgcaaattgtcaagtgtccgcagcggtgggatgttgttgtgcccacaggcggcaagtctgggaaggtagtgggctgggatgag

Protein Analysis

69

Amino Acids

7.81

Weight (kDa)

5.75

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 5, 68, 143, 148, 174
AclWI GGATC 1 cut(s) 97
AfiI CCNNNNNNNGG 3 cut(s) 112, 117, 173
AjnI CCWGG 1 cut(s) 111
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AlwI GGATC 1 cut(s) 97
ApeKI GCWGC 1 cut(s) 145
AspS9I GGNCC 1 cut(s) 22
AsuHPI GGTGA 1 cut(s) 85
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 83
BbvI GCAGC 1 cut(s) 157
BciT130I CCWGG 1 cut(s) 113
BisI GCNGC 3 cut(s) 5, 146, 175
BlsI GCNGC 3 cut(s) 6, 147, 176
Bme1390I CCNGG 1 cut(s) 113
Bme18I GGWCC 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 22
BmrFI CCNGG 1 cut(s) 113
BmsI GCATC 1 cut(s) 33
BpiI GAAGAC 1 cut(s) 83
BsaJI CCNNGG 1 cut(s) 111
Bsc4I CCNNNNNNNGG 3 cut(s) 112, 117, 173
BseBI CCWGG 1 cut(s) 113
BseDI CCNNGG 1 cut(s) 111
BseGI GGATG 1 cut(s) 160
BseLI CCNNNNNNNGG 3 cut(s) 112, 117, 173
BseSI GKGCMC 1 cut(s) 168
BseXI GCAGC 1 cut(s) 157
BseYI CCCAGC 1 cut(s) 198
BslI CCNNNNNNNGG 3 cut(s) 112, 117, 173
Bsp1286I GDGCHC 1 cut(s) 168
Bsp143I GATC 2 cut(s) 30, 102
BspACI CCGC 5 cut(s) 5, 68, 143, 148, 174
BspPI GGATC 1 cut(s) 97
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 2 cut(s) 30, 102
Bst2UI CCWGG 1 cut(s) 113
Bst4CI ACNGT 1 cut(s) 26
BstC8I GCNNGC 2 cut(s) 53, 93
BstENI CCTNNNNNAGG 1 cut(s) 110
BstF5I GGATG 1 cut(s) 160
BstKTI GATC 2 cut(s) 33, 105
BstMBI GATC 2 cut(s) 30, 102
BstMWI GCNNNNNNNGC 2 cut(s) 52, 88
BstNI CCWGG 1 cut(s) 113
BstSCI CCNGG 1 cut(s) 111
BstSLI GKGCMC 1 cut(s) 168
BstV1I GCAGC 1 cut(s) 157
BstV2I GAAGAC 1 cut(s) 83
BtsCI GGATG 1 cut(s) 160
BtsI GCAGTG 1 cut(s) 53
BtsIMutI CAGTG 1 cut(s) 53
Cac8I GCNNGC 2 cut(s) 53, 93
Cfr13I GGNCC 1 cut(s) 22
CseI GACGC 1 cut(s) 88
CviJI RGCY 3 cut(s) 14, 55, 198
CviKI_1 RGCY 3 cut(s) 14, 55, 198
DpnI GATC 2 cut(s) 32, 104
DpnII GATC 2 cut(s) 30, 102
EciI GGCGGA 1 cut(s) 83
Eco47I GGWCC 1 cut(s) 22
EcoNI CCTNNNNNAGG 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 111
FaiI YATR 1 cut(s) 85
Fnu4HI GCNGC 3 cut(s) 5, 146, 175
FokI GGATG 1 cut(s) 167
Fsp4HI GCNGC 3 cut(s) 5, 146, 175
GluI GCNGC 3 cut(s) 5, 146, 175
GsaI CCCAGC 1 cut(s) 202
HgaI GACGC 1 cut(s) 88
HphI GGTGA 1 cut(s) 85
Hpy188I TCNGA 2 cut(s) 30, 60
HpyAV CCTTC 1 cut(s) 181
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4V TGCA 3 cut(s) 46, 51, 127
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 88
Kzo9I GATC 2 cut(s) 30, 102
LpnPI CCDG 6 cut(s) 53, 98, 125, 156, 168, 184
Lsp1109I GCAGC 1 cut(s) 157
LweI GCATC 1 cut(s) 33
MalI GATC 2 cut(s) 32, 104
MboI GATC 2 cut(s) 30, 102
MboII GAAGA 1 cut(s) 88
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 1 cut(s) 129
MnlI CCTC 4 cut(s) 58, 64, 66, 116
MspA1I CMGCKG 1 cut(s) 148
MspR9I CCNGG 1 cut(s) 113
MvaI CCWGG 1 cut(s) 113
MwoI GCNNNNNNNGC 2 cut(s) 52, 88
NdeII GATC 2 cut(s) 30, 102
PkrI GCNGC 3 cut(s) 6, 147, 176
Psp6I CCWGG 1 cut(s) 111
PspFI CCCAGC 1 cut(s) 198
PspGI CCWGG 1 cut(s) 111
PspPI GGNCC 1 cut(s) 22
SatI GCNGC 3 cut(s) 5, 146, 175
Sau3AI GATC 2 cut(s) 30, 102
Sau96I GGNCC 1 cut(s) 22
ScrFI CCNGG 1 cut(s) 113
SduI GDGCHC 1 cut(s) 168
SetI ASST 3 cut(s) 42, 75, 192
SfaNI GCATC 1 cut(s) 33
SinI GGWCC 1 cut(s) 22
Sse9I AATT 1 cut(s) 129
SsiI CCGC 5 cut(s) 5, 68, 143, 148, 174
StyD4I CCNGG 1 cut(s) 111
TaaI ACNGT 1 cut(s) 26
TaqI TCGA 1 cut(s) 33
TasI AATT 1 cut(s) 129
TauI GCSGC 2 cut(s) 7, 177
TscAI CASTG 1 cut(s) 53
TseI GCWGC 1 cut(s) 145
TspGWI ACGGA 1 cut(s) 77
TspRI CASTG 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 22
XagI CCTNNNNNAGG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.