Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003559.1

Orthogroup ID

OG0004815

Physical Location & Seq

Genomic Coordinates Reverse (-)

99064 .. 114430

Gene Structure 15367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003559.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

atgtttgtggtcgatcgttttatctcgacaaactctaagtttggagaactctacaagctccaagcttggaatggccgggaaaaggtcgctggaggtcaccggaaaagtggtctgaagctggtggtcggagctaggcagggcggtgtgcggaaagttgttggcaggggcgcagggctctcggcagcttcttggcaggtcttgcggatgcttcggcagatgctcggcagggctcggcaggggctaggcagatctgcggagggtaggcacaaggcaggcacaggtgcttccggtagcgaggctaacccgagtggttcagcctattccggcggtcggttcaggctgttttcggccggttccttgaggctagggcttcaatatgtggggcggtggatgttggaatttgagggctacgaaattaggagtgagggtctccgattaattaatagtaaggaaagcatggtttggggtttcttccccgccgaccccctcgcaggtgaggatacatactatatctttgctacaggaacgtacaaagtgggtcggaaaggttgtgatgtaaatattgcaaaagacaaaggagtttctagggtccacgcagaaataattgttgattcaatgatttcagctctccctcggcaaactaaatcttctgttttatcctccaaagtccgaattagagattgctcaaaatatggaacgtatattaacaagaacgttacatcagtggagaagattcatgagttaccgaataaagaaacatcattgagagatggggacatggtttcatttggaactggtactgctgtcttcagattttcctttgttccccttattttgttcgcatgctgcccggaaaaatctcgggtgaatcatcctcttcaagagaaaatttcatcaatcggtgctcgcatcacctatcattggagtcaggagtgcacgcatgtgcttgttgaccaagtcatgccaatgaaagaagatctactggatggtattatggagaagaaaccttttgtagttggaagttgggttgagtttgttgcagagaagaacattctcactgagtttcctagttacacacccttttctccaacaatgaccatggaaggaatatcggtcaaacttgcggacccaagaagtcgagaaaactgtttaaaagggtatacatttttgttggactcaacactagtgtataaattcggtgatcggttgcagtccttactggaagtcagtggtgcagagattcttttaattgaaggatttaaatcaaaaagccaaatcccagattgcgcagtcagtgatcgtgttgtgtgtgttgtcccagaacgggtgtccgatgattgctctgataagcttggttcactattacgagtgaatgaactgggcttattatgtgccatattgaatggacggctggatccatgtatgttaaaatcaccttgcgtagttgtctcatcttcatgctccacagatgaaactgtggtagctgattctgatgtagaagaaacagccacatcagttctggcaactgcatctgttggcactggagttgttgaatatgtgccccatgcagttaccaaatcggataataactttgtcatgagctctagacgcagtagtgacatatccaccataagaggcaagcttgatgattctgaaagtgggattgctgatatcatttatagccaagatttgattgcgcgagataagagcataccttgtaccgttgttactagtgcaaacaacagattcataaatttcaaacgcttcagaaagacaaatactcagtctgggaatagcttcaacaatcttattccattctccaaggacccatataatgaatctgactatgggagtgaggaagtggtacagtctgtgaaggacgagaaaaggagaaagcacatggaagccatctctgaagaattatttaataatgaacagggtcgacgtcgtggtgtagctggttctcttcgtgggattcttagtcatggaaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000280 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007095 GO:0007127 GO:0007131 GO:0007154 GO:0007165 GO:0007346 GO:0008134 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0016043 GO:0016233 GO:0016234 GO:0022402 GO:0022414 GO:0023052 GO:0030870 GO:0031570 GO:0031572 GO:0031974 GO:0031981 GO:0032200 GO:0032392 GO:0032508 GO:0032991 GO:0033554 GO:0034641 GO:0035556 GO:0035825 GO:0042127 GO:0042405 GO:0042592 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044818 GO:0045786 GO:0045930 GO:0046483 GO:0047485 GO:0048145 GO:0048285 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051321 GO:0051716 GO:0051726 GO:0060249 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0071103 GO:0071214 GO:0071478 GO:0071479 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0104004 GO:0140013 GO:1901360 GO:1901363 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902749 GO:1902750 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko03440 ko04218 map03440 map04218

Pfam Domains

Protein Families

BRCT FHA

Protein Analysis

664

Amino Acids

73.09

Weight (kDa)

8.93

Isoelectric Point (pI)

40.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02680
fragaria_vesca	FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750 FvH4_5g39750
malus_domestica	MD09G1187400.v1.1
prunus_persica	Prupe.8G267600_v2.0.a1 Prupe.8G267600_v2.0.a1 Prupe.8G267600_v2.0.a1 Prupe.8G267600_v2.0.a1 Prupe.8G267600_v2.0.a1
pyrus_communis	pycom11g27760
rosa_chinensis	RchiOBHm_Chr7g0242051
rosa_laevigata	RLG00000000513
rosa_multiflora	Rmu_sc0003559.1_g000029
rosa_roxburghii	Rroxscaffold_3G00218250
rosa_rugosa	Rorug07G0350000 Rorug07G0350100 Rorug07G0350200 Rorug07G0350300
rosa_samantha	Rh7AG505100 Rh7BG476900 Rh7CG521300 Rh7DG490400
rosa_wichuraiana	Rw7G042680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	482
AatII	GACGTC	1 cut(s)	1948
Acc16I	TGCGCA	1 cut(s)	1288
Acc36I	ACCTGC	2 cut(s)	184, 482
AccI	GTMKAC	2 cut(s)	1160, 1942
AccII	CGCG	1 cut(s)	1699
AciI	CCGC	8 cut(s)	141, 148, 202, 254, 327, 385, 477, 1124
AclI	AACGTT	1 cut(s)	714
AclWI	GGATC	2 cut(s)	1409, 1422
AcoI	YGGCCR	2 cut(s)	73, 348
AcsI	RAATTY	4 cut(s)	398, 888, 1193, 1753
AcuI	CTGAAG	4 cut(s)	134, 793, 1750, 1935
AcyI	GRCGYC	1 cut(s)	1945
AfaI	GTAC	4 cut(s)	530, 799, 1720, 1866
AfiI	CCNNNNNNNGG	5 cut(s)	82, 330, 491, 921, 1324
AgsI	TTSAA	8 cut(s)	374, 615, 881, 1253, 1402, 1553, 1759, 1801
AhlI	ACTAGT	2 cut(s)	1183, 1730
AleI	CACNNNNGTG	1 cut(s)	941
Alw21I	GWGCWC	3 cut(s)	907, 938, 1604
Alw26I	GTCTC	2 cut(s)	434, 1453
Alw44I	GTGCAC	1 cut(s)	934
AlwI	GGATC	2 cut(s)	1409, 1422
Ama87I	CYCGRG	2 cut(s)	304, 861
AoxI	GGCC	2 cut(s)	73, 348
ApaLI	GTGCAC	1 cut(s)	934
ApeKI	GCWGC	2 cut(s)	182, 846
ApoI	RAATTY	4 cut(s)	398, 888, 1193, 1753
ArsI	GACNNNNNNTTYG	2 cut(s)	1769, 1801
AseI	ATTAAT	2 cut(s)	437, 441
Asp700I	GAANNNNTTC	1 cut(s)	1796
AspLEI	GCGC	3 cut(s)	170, 1289, 1699
AspS9I	GGNCC	3 cut(s)	589, 1126, 1825
AsuC2I	CCSGG	2 cut(s)	77, 851
AsuHPI	GGTGA	6 cut(s)	89, 506, 877, 904, 1211, 1425
AvaI	CYCGRG	2 cut(s)	304, 861
AvaII	GGWCC	3 cut(s)	589, 1126, 1825
BaeGI	GKGCMC	2 cut(s)	938, 1563
BaeI	ACNNNNGTAYC	2 cut(s)	789, 822
BamHI	GGATCC	1 cut(s)	1414
BanII	GRGCYC	3 cut(s)	177, 232, 1604
BbsI	GAAGAC	1 cut(s)	799
Bbv12I	GWGCWC	3 cut(s)	907, 938, 1604
BbvI	GCAGC	2 cut(s)	194, 833
BccI	CCATC	3 cut(s)	764, 980, 1916
BceAI	ACGGC	1 cut(s)	1424
BcgI	CGANNNNNNTGC	2 cut(s)	159, 193
BciVI	GTATCC	1 cut(s)	493
BcnI	CCSGG	2 cut(s)	77, 851
BcoDI	GTCTC	2 cut(s)	434, 1453
BcuI	ACTAGT	2 cut(s)	1183, 1730
BfaI	CTAG	8 cut(s)	132, 242, 365, 585, 1068, 1184, 1605, 1731
BfmI	CTRYAG	1 cut(s)	519
BfuAI	ACCTGC	2 cut(s)	184, 482
BfuI	GTATCC	1 cut(s)	493
BglII	AGATCT	2 cut(s)	248, 976
BisI	GCNGC	2 cut(s)	183, 847
BlsI	GCNGC	2 cut(s)	184, 848
Bme1390I	CCNGG	2 cut(s)	77, 851
Bme18I	GGWCC	3 cut(s)	589, 1126, 1825
BmeT110I	CYCGRG	2 cut(s)	304, 861
BmgT120I	GGNCC	3 cut(s)	589, 1126, 1825
BmiI	GGNNCC	5 cut(s)	355, 590, 1128, 1416, 1827
BmrFI	CCNGG	2 cut(s)	77, 851
BmrI	ACTGGG	1 cut(s)	1388
BmsI	GCATC	4 cut(s)	195, 207, 918, 1538
BmuI	ACTGGG	1 cut(s)	1388
BpiI	GAAGAC	1 cut(s)	799
BpmI	CTGGAG	2 cut(s)	111, 1563
BpuEI	CTTGAG	1 cut(s)	379
BpuMI	CCSGG	2 cut(s)	77, 851
BsaBI	GATNNNNATC	1 cut(s)	1261
BsaHI	GRCGYC	1 cut(s)	1945
BsaI	GGTCTC	1 cut(s)	434
BsaJI	CCNNGG	3 cut(s)	632, 1098, 1821
BsaWI	WCCGGW	2 cut(s)	99, 287
BsaXI	ACNNNNNCTCC	2 cut(s)	412, 442
Bsc4I	CCNNNNNNNGG	5 cut(s)	82, 330, 491, 921, 1324
Bse118I	RCCGGY	1 cut(s)	350
Bse1I	ACTGG	5 cut(s)	799, 987, 1224, 1383, 1546
Bse8I	GATNNNNATC	1 cut(s)	1261
BseDI	CCNNGG	3 cut(s)	632, 1098, 1821
BseGI	GGATG	4 cut(s)	210, 396, 871, 991
BseJI	GATNNNNATC	1 cut(s)	1261
BseLI	CCNNNNNNNGG	5 cut(s)	82, 330, 491, 921, 1324
BseMII	CTCAG	2 cut(s)	1050, 1796
BseNI	ACTGG	5 cut(s)	799, 987, 1224, 1383, 1546
BseSI	GKGCMC	2 cut(s)	938, 1563
BseX3I	CGGCCG	1 cut(s)	348
BseXI	GCAGC	2 cut(s)	194, 833
BsgI	GTGCAG	1 cut(s)	1254
Bsh1236I	CGCG	1 cut(s)	1699
Bsh1285I	CGRYCG	3 cut(s)	16, 331, 351
BshFI	GGCC	2 cut(s)	75, 350
BsiEI	CGRYCG	3 cut(s)	16, 331, 351
BsiHKAI	GWGCWC	3 cut(s)	907, 938, 1604
BsiHKCI	CYCGRG	2 cut(s)	304, 861
BsiSI	CCGG	6 cut(s)	76, 100, 288, 324, 351, 851
BslFI	GGGAC	2 cut(s)	788, 1301
BslI	CCNNNNNNNGG	5 cut(s)	82, 330, 491, 921, 1324
BsmAI	GTCTC	2 cut(s)	434, 1453
BsmFI	GGGAC	2 cut(s)	788, 1301
BsnI	GGCC	2 cut(s)	75, 350
Bso31I	GGTCTC	1 cut(s)	434
BsoBI	CYCGRG	2 cut(s)	304, 861
Bsp1286I	GDGCHC	6 cut(s)	177, 232, 907, 938, 1563, 1604
Bsp143I	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
Bsp19I	CCATGG	1 cut(s)	1098
BspACI	CCGC	8 cut(s)	141, 148, 202, 254, 327, 385, 477, 1124
BspANI	GGCC	2 cut(s)	75, 350
BspCNI	CTCAG	2 cut(s)	1051, 1795
BspFNI	CGCG	1 cut(s)	1699
BspHI	TCATGA	2 cut(s)	736, 1596
BspLI	GGNNCC	5 cut(s)	355, 590, 1128, 1416, 1827
BspMI	ACCTGC	2 cut(s)	184, 482
BspPI	GGATC	2 cut(s)	1409, 1422
BspTNI	GGTCTC	1 cut(s)	434
BsrFI	RCCGGY	1 cut(s)	350
BsrI	ACTGG	5 cut(s)	799, 987, 1224, 1383, 1546
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	3 cut(s)	632, 1098, 1821
BssMI	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
BssNAI	GTATAC	1 cut(s)	1161
BssNI	GRCGYC	1 cut(s)	1945
BssT1I	CCWWGG	2 cut(s)	1098, 1821
Bst1107I	GTATAC	1 cut(s)	1161
Bst4CI	ACNGT	4 cut(s)	1148, 1477, 1723, 1869
Bst6I	CTCTTC	2 cut(s)	882, 1971
BstACI	GRCGYC	1 cut(s)	1945
BstAPI	GCANNNNNTGC	1 cut(s)	199
BstC8I	GCNNGC	5 cut(s)	274, 844, 907, 938, 1640
BstDEI	CTNAG	4 cut(s)	36, 1059, 1782, 1979
BstDSI	CCRYGG	1 cut(s)	1098
BstEII	GGTNACC	1 cut(s)	95
BstF5I	GGATG	4 cut(s)	210, 396, 871, 991
BstFNI	CGCG	1 cut(s)	1699
BstHHI	GCGC	3 cut(s)	170, 1289, 1699
BstKTI	GATC	6 cut(s)	16, 251, 979, 1204, 1300, 1417
BstMAI	GTCTC	2 cut(s)	434, 1453
BstMBI	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
BstMCI	CGRYCG	3 cut(s)	16, 331, 351
BstMWI	GCNNNNNNNGC	2 cut(s)	199, 1608
BstNSI	RCATGY	2 cut(s)	846, 944
BstPI	GGTNACC	1 cut(s)	95
BstSCI	CCNGG	2 cut(s)	75, 849
BstSFI	CTRYAG	1 cut(s)	519
BstSLI	GKGCMC	2 cut(s)	938, 1563
BstUI	CGCG	1 cut(s)	1699
BstV1I	GCAGC	2 cut(s)	194, 833
BstV2I	GAAGAC	1 cut(s)	799
BstX2I	RGATCY	3 cut(s)	248, 976, 1414
BstYI	RGATCY	3 cut(s)	248, 976, 1414
BstZ17I	GTATAC	1 cut(s)	1161
BstZI	CGGCCG	1 cut(s)	348
BsuI	GTATCC	1 cut(s)	493
BsuRI	GGCC	2 cut(s)	75, 350
BtgI	CCRYGG	1 cut(s)	1098
BtsCI	GGATG	4 cut(s)	210, 396, 871, 991
BtsIMutI	CAGTG	5 cut(s)	729, 1056, 1234, 1300, 1539
BveI	ACCTGC	2 cut(s)	184, 482
Cac8I	GCNNGC	5 cut(s)	274, 844, 907, 938, 1640
CciI	TCATGA	2 cut(s)	736, 1596
CfoI	GCGC	3 cut(s)	170, 1289, 1699
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	3 cut(s)	589, 1126, 1825
CseI	GACGC	1 cut(s)	1617
Csp6I	GTAC	4 cut(s)	529, 798, 1719, 1865
CviQI	GTAC	4 cut(s)	529, 798, 1719, 1865
DdeI	CTNAG	4 cut(s)	36, 1059, 1782, 1979
DpnI	GATC	6 cut(s)	15, 250, 978, 1203, 1299, 1416
DpnII	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
DraI	TTTAAA	2 cut(s)	1152, 1261
EaeI	YGGCCR	2 cut(s)	73, 348
EagI	CGGCCG	1 cut(s)	348
Eam1104I	CTCTTC	2 cut(s)	882, 1971
EarI	CTCTTC	2 cut(s)	882, 1971
Ecl136II	GAGCTC	1 cut(s)	1602
EclXI	CGGCCG	1 cut(s)	348
Eco130I	CCWWGG	2 cut(s)	1098, 1821
Eco24I	GRGCYC	3 cut(s)	177, 232, 1604
Eco31I	GGTCTC	1 cut(s)	434
Eco32I	GATATC	1 cut(s)	1672
Eco47I	GGWCC	3 cut(s)	589, 1126, 1825
Eco52I	CGGCCG	1 cut(s)	348
Eco53kI	GAGCTC	1 cut(s)	1602
Eco57I	CTGAAG	4 cut(s)	134, 793, 1750, 1935
Eco88I	CYCGRG	2 cut(s)	304, 861
Eco91I	GGTNACC	1 cut(s)	95
EcoICRI	GAGCTC	1 cut(s)	1602
EcoO109I	RGGNCCY	1 cut(s)	1825
EcoO65I	GGTNACC	1 cut(s)	95
EcoRV	GATATC	1 cut(s)	1672
EcoT14I	CCWWGG	2 cut(s)	1098, 1821
EcoT38I	GRGCYC	3 cut(s)	177, 232, 1604
ErhI	CCWWGG	2 cut(s)	1098, 1821
FaqI	GGGAC	2 cut(s)	788, 1301
FauI	CCCGC	1 cut(s)	484
FblI	GTMKAC	2 cut(s)	1160, 1942
Fnu4HI	GCNGC	2 cut(s)	183, 847
FokI	GGATG	4 cut(s)	217, 403, 858, 998
FriOI	GRGCYC	3 cut(s)	177, 232, 1604
Fsp4HI	GCNGC	2 cut(s)	183, 847
FspBI	CTAG	8 cut(s)	132, 242, 365, 585, 1068, 1184, 1605, 1731
FspI	TGCGCA	1 cut(s)	1288
GlaI	GCGC	3 cut(s)	169, 1288, 1698
GluI	GCNGC	2 cut(s)	183, 847
GsuI	CTGGAG	2 cut(s)	111, 1563
HaeIII	GGCC	2 cut(s)	75, 350
HapII	CCGG	6 cut(s)	76, 100, 288, 324, 351, 851
HgaI	GACGC	1 cut(s)	1617
HhaI	GCGC	3 cut(s)	170, 1289, 1699
Hin1I	GRCGYC	1 cut(s)	1945
Hin6I	GCGC	3 cut(s)	168, 1287, 1697
HinP1I	GCGC	3 cut(s)	168, 1287, 1697
HincII	GTYRAC	2 cut(s)	952, 1943
HindII	GTYRAC	2 cut(s)	952, 1943
HindIII	AAGCTT	3 cut(s)	63, 1349, 1640
HpaII	CCGG	6 cut(s)	76, 100, 288, 324, 351, 851
HphI	GGTGA	6 cut(s)	89, 506, 877, 904, 1211, 1425
Hpy166II	GTNNAC	6 cut(s)	592, 936, 952, 1161, 1358, 1943
Hpy188III	TCNNGA	7 cut(s)	25, 737, 881, 929, 1139, 1597, 1605
Hpy8I	GTNNAC	6 cut(s)	592, 936, 952, 1161, 1358, 1943
Hpy99I	CGWCG	2 cut(s)	1947, 1950
HpyAV	CCTTC	3 cut(s)	1097, 1247, 1870
HpyCH4III	ACNGT	4 cut(s)	1148, 1477, 1723, 1869
HpyCH4IV	ACGT	4 cut(s)	527, 698, 714, 1945
HpyCH4V	TGCA	8 cut(s)	566, 936, 1040, 1210, 1235, 1529, 1568, 1736
HpyF10VI	GCNNNNNNNGC	2 cut(s)	199, 1608
HpyF3I	CTNAG	4 cut(s)	36, 1059, 1782, 1979
HpySE526I	ACGT	4 cut(s)	527, 698, 714, 1945
Hsp92I	GRCGYC	1 cut(s)	1945
HspAI	GCGC	3 cut(s)	168, 1287, 1697
Kzo9I	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
LmnI	GCTCC	3 cut(s)	63, 128, 1466
Lsp1109I	GCAGC	2 cut(s)	194, 833
LweI	GCATC	4 cut(s)	195, 207, 918, 1538
MaeI	CTAG	8 cut(s)	132, 242, 365, 585, 1068, 1184, 1605, 1731
MaeII	ACGT	4 cut(s)	527, 698, 714, 1945
MaeIII	GTNAC	7 cut(s)	95, 715, 741, 1070, 1570, 1616, 1726
MalI	GATC	6 cut(s)	15, 250, 978, 1203, 1299, 1416
MboI	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
MflI	RGATCY	3 cut(s)	248, 976, 1414
MhlI	GDGCHC	6 cut(s)	177, 232, 907, 938, 1563, 1604
MlyI	GAGTC	2 cut(s)	934, 1169
MmeI	TCCRAC	6 cut(s)	106, 375, 521, 997, 1112, 1152
MroXI	GAANNNNTTC	1 cut(s)	1796
MseI	TTAA	8 cut(s)	437, 441, 705, 1151, 1247, 1260, 1427, 1926
MslI	CAYNNNNRTG	3 cut(s)	941, 965, 1456
MspI	CCGG	6 cut(s)	76, 100, 288, 324, 351, 851
MspR9I	CCNGG	2 cut(s)	77, 851
MvnI	CGCG	1 cut(s)	1699
MwoI	GCNNNNNNNGC	2 cut(s)	199, 1608
NciI	CCSGG	2 cut(s)	77, 851
NcoI	CCATGG	1 cut(s)	1098
NdeII	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
NlaIV	GGNNCC	5 cut(s)	355, 590, 1128, 1416, 1827
NmeAIII	GCCGAG	4 cut(s)	158, 201, 211, 613
NmuCI	GTSAC	2 cut(s)	95, 1616
NsbI	TGCGCA	1 cut(s)	1288
NspI	RCATGY	2 cut(s)	846, 944
OliI	CACNNNNGTG	1 cut(s)	941
PacI	TTAATTAA	1 cut(s)	441
PaeI	GCATGC	1 cut(s)	846
PagI	TCATGA	2 cut(s)	736, 1596
PaqCI	CACCTGC	1 cut(s)	482
PdmI	GAANNNNTTC	1 cut(s)	1796
PfeI	GAWTC	9 cut(s)	611, 733, 868, 1240, 1487, 1649, 1746, 1838, 1975
PflFI	GACNNNGTC	1 cut(s)	956
PkrI	GCNGC	2 cut(s)	184, 848
Ple19I	CGATCG	1 cut(s)	16
PleI	GAGTC	2 cut(s)	933, 1169
PpsI	GAGTC	2 cut(s)	933, 1169
PpuMI	RGGWCCY	1 cut(s)	1825
PshBI	ATTAAT	2 cut(s)	437, 441
Psp124BI	GAGCTC	1 cut(s)	1604
Psp1406I	AACGTT	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	1825
PspEI	GGTNACC	1 cut(s)	95
PspN4I	GGNNCC	5 cut(s)	355, 590, 1128, 1416, 1827
PspPI	GGNCC	3 cut(s)	589, 1126, 1825
PspPPI	RGGWCCY	1 cut(s)	1825
PsuI	RGATCY	3 cut(s)	248, 976, 1414
PsyI	GACNNNGTC	1 cut(s)	956
PvuI	CGATCG	1 cut(s)	16
RsaI	GTAC	4 cut(s)	530, 799, 1720, 1866
RsaNI	GTAC	4 cut(s)	529, 798, 1719, 1865
RseI	CAYNNNNRTG	3 cut(s)	941, 965, 1456
SacI	GAGCTC	1 cut(s)	1604
SalI	GTCGAC	1 cut(s)	1941
SaqAI	TTAA	8 cut(s)	437, 441, 705, 1151, 1247, 1260, 1427, 1926
SatI	GCNGC	2 cut(s)	183, 847
Sau3AI	GATC	6 cut(s)	13, 248, 976, 1201, 1297, 1414
Sau96I	GGNCC	3 cut(s)	589, 1126, 1825
SchI	GAGTC	2 cut(s)	934, 1169
ScrFI	CCNGG	2 cut(s)	77, 851
SduI	GDGCHC	6 cut(s)	177, 232, 907, 938, 1563, 1604
SfaNI	GCATC	4 cut(s)	195, 207, 918, 1538
SfcI	CTRYAG	1 cut(s)	519
SinI	GGWCC	3 cut(s)	589, 1126, 1825
SmiI	ATTTAAAT	1 cut(s)	1261
SmiMI	CAYNNNNRTG	3 cut(s)	941, 965, 1456
SmlI	CTYRAG	1 cut(s)	358
SmoI	CTYRAG	1 cut(s)	358
SpeI	ACTAGT	2 cut(s)	1183, 1730
SphI	GCATGC	1 cut(s)	846
SsiI	CCGC	8 cut(s)	141, 148, 202, 254, 327, 385, 477, 1124
SspI	AATATT	1 cut(s)	562
SspMI	CTAG	8 cut(s)	132, 242, 365, 585, 1068, 1184, 1605, 1731
SstI	GAGCTC	1 cut(s)	1604
StyD4I	CCNGG	2 cut(s)	75, 849
StyI	CCWWGG	2 cut(s)	1098, 1821
SwaI	ATTTAAAT	1 cut(s)	1261
TaaI	ACNGT	4 cut(s)	1148, 1477, 1723, 1869
TaiI	ACGT	4 cut(s)	530, 701, 717, 1948
TaqI	TCGA	4 cut(s)	12, 26, 1138, 1942
TaqII	GACCGA	1 cut(s)	1102
TfiI	GAWTC	9 cut(s)	611, 733, 868, 1240, 1487, 1649, 1746, 1838, 1975
Tru1I	TTAA	8 cut(s)	437, 441, 705, 1151, 1247, 1260, 1427, 1926
Tru9I	TTAA	8 cut(s)	437, 441, 705, 1151, 1247, 1260, 1427, 1926
TscAI	CASTG	5 cut(s)	729, 1063, 1234, 1300, 1546
TseFI	GTSAC	2 cut(s)	95, 1616
TseI	GCWGC	2 cut(s)	182, 846
Tsp45I	GTSAC	2 cut(s)	95, 1616
TspRI	CASTG	5 cut(s)	729, 1063, 1234, 1300, 1546
Tth111I	GACNNNGTC	1 cut(s)	956
VneI	GTGCAC	1 cut(s)	934
VpaK11BI	GGWCC	3 cut(s)	589, 1126, 1825
VspI	ATTAAT	2 cut(s)	437, 441
XapI	RAATTY	4 cut(s)	398, 888, 1193, 1753
XbaI	TCTAGA	1 cut(s)	1604
XceI	RCATGY	2 cut(s)	846, 944
XcmI	CCANNNNNNNNNTGG	2 cut(s)	68, 1516
XmiI	GTMKAC	2 cut(s)	1160, 1942
XmnI	GAANNNNTTC	1 cut(s)	1796
XspI	CTAG	8 cut(s)	132, 242, 365, 585, 1068, 1184, 1605, 1731
ZraI	GACGTC	1 cut(s)	1946

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.