Rmu_sc0003559.1_g000029

Forkhead associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003559.1
OG0004815
Physical Location & Seq
Reverse (-)
99064 .. 114430
15367 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1995 bp
atgtttgtggtcgatcgttttatctcgacaaactctaagtttggagaactctacaagctccaagcttggaatggccgggaaaaggtcgctggaggtcaccggaaaagtggtctgaagctggtggtcggagctaggcagggcggtgtgcggaaagttgttggcaggggcgcagggctctcggcagcttcttggcaggtcttgcggatgcttcggcagatgctcggcagggctcggcaggggctaggcagatctgcggagggtaggcacaaggcaggcacaggtgcttccggtagcgaggctaacccgagtggttcagcctattccggcggtcggttcaggctgttttcggccggttccttgaggctagggcttcaatatgtggggcggtggatgttggaatttgagggctacgaaattaggagtgagggtctccgattaattaatagtaaggaaagcatggtttggggtttcttccccgccgaccccctcgcaggtgaggatacatactatatctttgctacaggaacgtacaaagtgggtcggaaaggttgtgatgtaaatattgcaaaagacaaaggagtttctagggtccacgcagaaataattgttgattcaatgatttcagctctccctcggcaaactaaatcttctgttttatcctccaaagtccgaattagagattgctcaaaatatggaacgtatattaacaagaacgttacatcagtggagaagattcatgagttaccgaataaagaaacatcattgagagatggggacatggtttcatttggaactggtactgctgtcttcagattttcctttgttccccttattttgttcgcatgctgcccggaaaaatctcgggtgaatcatcctcttcaagagaaaatttcatcaatcggtgctcgcatcacctatcattggagtcaggagtgcacgcatgtgcttgttgaccaagtcatgccaatgaaagaagatctactggatggtattatggagaagaaaccttttgtagttggaagttgggttgagtttgttgcagagaagaacattctcactgagtttcctagttacacacccttttctccaacaatgaccatggaaggaatatcggtcaaacttgcggacccaagaagtcgagaaaactgtttaaaagggtatacatttttgttggactcaacactagtgtataaattcggtgatcggttgcagtccttactggaagtcagtggtgcagagattcttttaattgaaggatttaaatcaaaaagccaaatcccagattgcgcagtcagtgatcgtgttgtgtgtgttgtcccagaacgggtgtccgatgattgctctgataagcttggttcactattacgagtgaatgaactgggcttattatgtgccatattgaatggacggctggatccatgtatgttaaaatcaccttgcgtagttgtctcatcttcatgctccacagatgaaactgtggtagctgattctgatgtagaagaaacagccacatcagttctggcaactgcatctgttggcactggagttgttgaatatgtgccccatgcagttaccaaatcggataataactttgtcatgagctctagacgcagtagtgacatatccaccataagaggcaagcttgatgattctgaaagtgggattgctgatatcatttatagccaagatttgattgcgcgagataagagcataccttgtaccgttgttactagtgcaaacaacagattcataaatttcaaacgcttcagaaagacaaatactcagtctgggaatagcttcaacaatcttattccattctccaaggacccatataatgaatctgactatgggagtgaggaagtggtacagtctgtgaaggacgagaaaaggagaaagcacatggaagccatctctgaagaattatttaataatgaacagggtcgacgtcgtggtgtagctggttctcttcgtgggattcttagtcatggaaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000077 GO:0000228 GO:0000278 GO:0000280 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007093 GO:0007095 GO:0007127 GO:0007131 GO:0007154 GO:0007165 GO:0007346 GO:0008134 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0016043 GO:0016233 GO:0016234 GO:0022402 GO:0022414 GO:0023052 GO:0030870 GO:0031570 GO:0031572 GO:0031974 GO:0031981 GO:0032200 GO:0032392 GO:0032508 GO:0032991 GO:0033554 GO:0034641 GO:0035556 GO:0035825 GO:0042127 GO:0042405 GO:0042592 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044773 GO:0044774 GO:0044818 GO:0045786 GO:0045930 GO:0046483 GO:0047485 GO:0048145 GO:0048285 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051321 GO:0051716 GO:0051726 GO:0060249 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0071103 GO:0071214 GO:0071478 GO:0071479 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:0104004 GO:0140013 GO:1901360 GO:1901363 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902749 GO:1902750 GO:1903046 GO:1903047
KEGG Pathways
Metabolic & Signaling
ko03440 ko04218 map03440 map04218
Pfam Domains
Protein Families
BRCT FHA

Protein Analysis

664

Amino Acids

73.09

Weight (kDa)

8.93

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 177 - 264 5.9e-10 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 482
AatII GACGTC 1 cut(s) 1948
Acc16I TGCGCA 1 cut(s) 1288
Acc36I ACCTGC 2 cut(s) 184, 482
AccI GTMKAC 2 cut(s) 1160, 1942
AccII CGCG 1 cut(s) 1699
AciI CCGC 8 cut(s) 141, 148, 202, 254, 327, 385, 477, 1124
AclI AACGTT 1 cut(s) 714
AclWI GGATC 2 cut(s) 1409, 1422
AcoI YGGCCR 2 cut(s) 73, 348
AcsI RAATTY 4 cut(s) 398, 888, 1193, 1753
AcuI CTGAAG 4 cut(s) 134, 793, 1750, 1935
AcyI GRCGYC 1 cut(s) 1945
AfaI GTAC 4 cut(s) 530, 799, 1720, 1866
AfiI CCNNNNNNNGG 5 cut(s) 82, 330, 491, 921, 1324
AgsI TTSAA 8 cut(s) 374, 615, 881, 1253, 1402, 1553, 1759, 1801
AhlI ACTAGT 2 cut(s) 1183, 1730
AleI CACNNNNGTG 1 cut(s) 941
Alw21I GWGCWC 3 cut(s) 907, 938, 1604
Alw26I GTCTC 2 cut(s) 434, 1453
Alw44I GTGCAC 1 cut(s) 934
AlwI GGATC 2 cut(s) 1409, 1422
Ama87I CYCGRG 2 cut(s) 304, 861
AoxI GGCC 2 cut(s) 73, 348
ApaLI GTGCAC 1 cut(s) 934
ApeKI GCWGC 2 cut(s) 182, 846
ApoI RAATTY 4 cut(s) 398, 888, 1193, 1753
ArsI GACNNNNNNTTYG 2 cut(s) 1769, 1801
AseI ATTAAT 2 cut(s) 437, 441
Asp700I GAANNNNTTC 1 cut(s) 1796
AspLEI GCGC 3 cut(s) 170, 1289, 1699
AspS9I GGNCC 3 cut(s) 589, 1126, 1825
AsuC2I CCSGG 2 cut(s) 77, 851
AsuHPI GGTGA 6 cut(s) 89, 506, 877, 904, 1211, 1425
AvaI CYCGRG 2 cut(s) 304, 861
AvaII GGWCC 3 cut(s) 589, 1126, 1825
BaeGI GKGCMC 2 cut(s) 938, 1563
BaeI ACNNNNGTAYC 2 cut(s) 789, 822
BamHI GGATCC 1 cut(s) 1414
BanII GRGCYC 3 cut(s) 177, 232, 1604
BbsI GAAGAC 1 cut(s) 799
Bbv12I GWGCWC 3 cut(s) 907, 938, 1604
BbvI GCAGC 2 cut(s) 194, 833
BccI CCATC 3 cut(s) 764, 980, 1916
BceAI ACGGC 1 cut(s) 1424
BcgI CGANNNNNNTGC 2 cut(s) 159, 193
BciVI GTATCC 1 cut(s) 493
BcnI CCSGG 2 cut(s) 77, 851
BcoDI GTCTC 2 cut(s) 434, 1453
BcuI ACTAGT 2 cut(s) 1183, 1730
BfaI CTAG 8 cut(s) 132, 242, 365, 585, 1068, 1184, 1605, 1731
BfmI CTRYAG 1 cut(s) 519
BfuAI ACCTGC 2 cut(s) 184, 482
BfuI GTATCC 1 cut(s) 493
BglII AGATCT 2 cut(s) 248, 976
BisI GCNGC 2 cut(s) 183, 847
BlsI GCNGC 2 cut(s) 184, 848
Bme1390I CCNGG 2 cut(s) 77, 851
Bme18I GGWCC 3 cut(s) 589, 1126, 1825
BmeT110I CYCGRG 2 cut(s) 304, 861
BmgT120I GGNCC 3 cut(s) 589, 1126, 1825
BmiI GGNNCC 5 cut(s) 355, 590, 1128, 1416, 1827
BmrFI CCNGG 2 cut(s) 77, 851
BmrI ACTGGG 1 cut(s) 1388
BmsI GCATC 4 cut(s) 195, 207, 918, 1538
BmuI ACTGGG 1 cut(s) 1388
BpiI GAAGAC 1 cut(s) 799
BpmI CTGGAG 2 cut(s) 111, 1563
BpuEI CTTGAG 1 cut(s) 379
BpuMI CCSGG 2 cut(s) 77, 851
BsaBI GATNNNNATC 1 cut(s) 1261
BsaHI GRCGYC 1 cut(s) 1945
BsaI GGTCTC 1 cut(s) 434
BsaJI CCNNGG 3 cut(s) 632, 1098, 1821
BsaWI WCCGGW 2 cut(s) 99, 287
BsaXI ACNNNNNCTCC 2 cut(s) 412, 442
Bsc4I CCNNNNNNNGG 5 cut(s) 82, 330, 491, 921, 1324
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 5 cut(s) 799, 987, 1224, 1383, 1546
Bse8I GATNNNNATC 1 cut(s) 1261
BseDI CCNNGG 3 cut(s) 632, 1098, 1821
BseGI GGATG 4 cut(s) 210, 396, 871, 991
BseJI GATNNNNATC 1 cut(s) 1261
BseLI CCNNNNNNNGG 5 cut(s) 82, 330, 491, 921, 1324
BseMII CTCAG 2 cut(s) 1050, 1796
BseNI ACTGG 5 cut(s) 799, 987, 1224, 1383, 1546
BseSI GKGCMC 2 cut(s) 938, 1563
BseX3I CGGCCG 1 cut(s) 348
BseXI GCAGC 2 cut(s) 194, 833
BsgI GTGCAG 1 cut(s) 1254
Bsh1236I CGCG 1 cut(s) 1699
Bsh1285I CGRYCG 3 cut(s) 16, 331, 351
BshFI GGCC 2 cut(s) 75, 350
BsiEI CGRYCG 3 cut(s) 16, 331, 351
BsiHKAI GWGCWC 3 cut(s) 907, 938, 1604
BsiHKCI CYCGRG 2 cut(s) 304, 861
BsiSI CCGG 6 cut(s) 76, 100, 288, 324, 351, 851
BslFI GGGAC 2 cut(s) 788, 1301
BslI CCNNNNNNNGG 5 cut(s) 82, 330, 491, 921, 1324
BsmAI GTCTC 2 cut(s) 434, 1453
BsmFI GGGAC 2 cut(s) 788, 1301
BsnI GGCC 2 cut(s) 75, 350
Bso31I GGTCTC 1 cut(s) 434
BsoBI CYCGRG 2 cut(s) 304, 861
Bsp1286I GDGCHC 6 cut(s) 177, 232, 907, 938, 1563, 1604
Bsp143I GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
Bsp19I CCATGG 1 cut(s) 1098
BspACI CCGC 8 cut(s) 141, 148, 202, 254, 327, 385, 477, 1124
BspANI GGCC 2 cut(s) 75, 350
BspCNI CTCAG 2 cut(s) 1051, 1795
BspFNI CGCG 1 cut(s) 1699
BspHI TCATGA 2 cut(s) 736, 1596
BspLI GGNNCC 5 cut(s) 355, 590, 1128, 1416, 1827
BspMI ACCTGC 2 cut(s) 184, 482
BspPI GGATC 2 cut(s) 1409, 1422
BspTNI GGTCTC 1 cut(s) 434
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 5 cut(s) 799, 987, 1224, 1383, 1546
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 3 cut(s) 632, 1098, 1821
BssMI GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
BssNAI GTATAC 1 cut(s) 1161
BssNI GRCGYC 1 cut(s) 1945
BssT1I CCWWGG 2 cut(s) 1098, 1821
Bst1107I GTATAC 1 cut(s) 1161
Bst4CI ACNGT 4 cut(s) 1148, 1477, 1723, 1869
Bst6I CTCTTC 2 cut(s) 882, 1971
BstACI GRCGYC 1 cut(s) 1945
BstAPI GCANNNNNTGC 1 cut(s) 199
BstC8I GCNNGC 5 cut(s) 274, 844, 907, 938, 1640
BstDEI CTNAG 4 cut(s) 36, 1059, 1782, 1979
BstDSI CCRYGG 1 cut(s) 1098
BstEII GGTNACC 1 cut(s) 95
BstF5I GGATG 4 cut(s) 210, 396, 871, 991
BstFNI CGCG 1 cut(s) 1699
BstHHI GCGC 3 cut(s) 170, 1289, 1699
BstKTI GATC 6 cut(s) 16, 251, 979, 1204, 1300, 1417
BstMAI GTCTC 2 cut(s) 434, 1453
BstMBI GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
BstMCI CGRYCG 3 cut(s) 16, 331, 351
BstMWI GCNNNNNNNGC 2 cut(s) 199, 1608
BstNSI RCATGY 2 cut(s) 846, 944
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 2 cut(s) 75, 849
BstSFI CTRYAG 1 cut(s) 519
BstSLI GKGCMC 2 cut(s) 938, 1563
BstUI CGCG 1 cut(s) 1699
BstV1I GCAGC 2 cut(s) 194, 833
BstV2I GAAGAC 1 cut(s) 799
BstX2I RGATCY 3 cut(s) 248, 976, 1414
BstYI RGATCY 3 cut(s) 248, 976, 1414
BstZ17I GTATAC 1 cut(s) 1161
BstZI CGGCCG 1 cut(s) 348
BsuI GTATCC 1 cut(s) 493
BsuRI GGCC 2 cut(s) 75, 350
BtgI CCRYGG 1 cut(s) 1098
BtsCI GGATG 4 cut(s) 210, 396, 871, 991
BtsIMutI CAGTG 5 cut(s) 729, 1056, 1234, 1300, 1539
BveI ACCTGC 2 cut(s) 184, 482
Cac8I GCNNGC 5 cut(s) 274, 844, 907, 938, 1640
CciI TCATGA 2 cut(s) 736, 1596
CfoI GCGC 3 cut(s) 170, 1289, 1699
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 3 cut(s) 589, 1126, 1825
CseI GACGC 1 cut(s) 1617
Csp6I GTAC 4 cut(s) 529, 798, 1719, 1865
CviQI GTAC 4 cut(s) 529, 798, 1719, 1865
DdeI CTNAG 4 cut(s) 36, 1059, 1782, 1979
DpnI GATC 6 cut(s) 15, 250, 978, 1203, 1299, 1416
DpnII GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
DraI TTTAAA 2 cut(s) 1152, 1261
EaeI YGGCCR 2 cut(s) 73, 348
EagI CGGCCG 1 cut(s) 348
Eam1104I CTCTTC 2 cut(s) 882, 1971
EarI CTCTTC 2 cut(s) 882, 1971
Ecl136II GAGCTC 1 cut(s) 1602
EclXI CGGCCG 1 cut(s) 348
Eco130I CCWWGG 2 cut(s) 1098, 1821
Eco24I GRGCYC 3 cut(s) 177, 232, 1604
Eco31I GGTCTC 1 cut(s) 434
Eco32I GATATC 1 cut(s) 1672
Eco47I GGWCC 3 cut(s) 589, 1126, 1825
Eco52I CGGCCG 1 cut(s) 348
Eco53kI GAGCTC 1 cut(s) 1602
Eco57I CTGAAG 4 cut(s) 134, 793, 1750, 1935
Eco88I CYCGRG 2 cut(s) 304, 861
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1602
EcoO109I RGGNCCY 1 cut(s) 1825
EcoO65I GGTNACC 1 cut(s) 95
EcoRV GATATC 1 cut(s) 1672
EcoT14I CCWWGG 2 cut(s) 1098, 1821
EcoT38I GRGCYC 3 cut(s) 177, 232, 1604
ErhI CCWWGG 2 cut(s) 1098, 1821
FaqI GGGAC 2 cut(s) 788, 1301
FauI CCCGC 1 cut(s) 484
FblI GTMKAC 2 cut(s) 1160, 1942
Fnu4HI GCNGC 2 cut(s) 183, 847
FokI GGATG 4 cut(s) 217, 403, 858, 998
FriOI GRGCYC 3 cut(s) 177, 232, 1604
Fsp4HI GCNGC 2 cut(s) 183, 847
FspBI CTAG 8 cut(s) 132, 242, 365, 585, 1068, 1184, 1605, 1731
FspI TGCGCA 1 cut(s) 1288
GlaI GCGC 3 cut(s) 169, 1288, 1698
GluI GCNGC 2 cut(s) 183, 847
GsuI CTGGAG 2 cut(s) 111, 1563
HaeIII GGCC 2 cut(s) 75, 350
HapII CCGG 6 cut(s) 76, 100, 288, 324, 351, 851
HgaI GACGC 1 cut(s) 1617
HhaI GCGC 3 cut(s) 170, 1289, 1699
Hin1I GRCGYC 1 cut(s) 1945
Hin6I GCGC 3 cut(s) 168, 1287, 1697
HinP1I GCGC 3 cut(s) 168, 1287, 1697
HincII GTYRAC 2 cut(s) 952, 1943
HindII GTYRAC 2 cut(s) 952, 1943
HindIII AAGCTT 3 cut(s) 63, 1349, 1640
HpaII CCGG 6 cut(s) 76, 100, 288, 324, 351, 851
HphI GGTGA 6 cut(s) 89, 506, 877, 904, 1211, 1425
Hpy166II GTNNAC 6 cut(s) 592, 936, 952, 1161, 1358, 1943
Hpy188III TCNNGA 7 cut(s) 25, 737, 881, 929, 1139, 1597, 1605
Hpy8I GTNNAC 6 cut(s) 592, 936, 952, 1161, 1358, 1943
Hpy99I CGWCG 2 cut(s) 1947, 1950
HpyAV CCTTC 3 cut(s) 1097, 1247, 1870
HpyCH4III ACNGT 4 cut(s) 1148, 1477, 1723, 1869
HpyCH4IV ACGT 4 cut(s) 527, 698, 714, 1945
HpyCH4V TGCA 8 cut(s) 566, 936, 1040, 1210, 1235, 1529, 1568, 1736
HpyF10VI GCNNNNNNNGC 2 cut(s) 199, 1608
HpyF3I CTNAG 4 cut(s) 36, 1059, 1782, 1979
HpySE526I ACGT 4 cut(s) 527, 698, 714, 1945
Hsp92I GRCGYC 1 cut(s) 1945
HspAI GCGC 3 cut(s) 168, 1287, 1697
Kzo9I GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
LmnI GCTCC 3 cut(s) 63, 128, 1466
Lsp1109I GCAGC 2 cut(s) 194, 833
LweI GCATC 4 cut(s) 195, 207, 918, 1538
MaeI CTAG 8 cut(s) 132, 242, 365, 585, 1068, 1184, 1605, 1731
MaeII ACGT 4 cut(s) 527, 698, 714, 1945
MaeIII GTNAC 7 cut(s) 95, 715, 741, 1070, 1570, 1616, 1726
MalI GATC 6 cut(s) 15, 250, 978, 1203, 1299, 1416
MboI GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
MflI RGATCY 3 cut(s) 248, 976, 1414
MhlI GDGCHC 6 cut(s) 177, 232, 907, 938, 1563, 1604
MlyI GAGTC 2 cut(s) 934, 1169
MmeI TCCRAC 6 cut(s) 106, 375, 521, 997, 1112, 1152
MroXI GAANNNNTTC 1 cut(s) 1796
MseI TTAA 8 cut(s) 437, 441, 705, 1151, 1247, 1260, 1427, 1926
MslI CAYNNNNRTG 3 cut(s) 941, 965, 1456
MspI CCGG 6 cut(s) 76, 100, 288, 324, 351, 851
MspR9I CCNGG 2 cut(s) 77, 851
MvnI CGCG 1 cut(s) 1699
MwoI GCNNNNNNNGC 2 cut(s) 199, 1608
NciI CCSGG 2 cut(s) 77, 851
NcoI CCATGG 1 cut(s) 1098
NdeII GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
NlaIV GGNNCC 5 cut(s) 355, 590, 1128, 1416, 1827
NmeAIII GCCGAG 4 cut(s) 158, 201, 211, 613
NmuCI GTSAC 2 cut(s) 95, 1616
NsbI TGCGCA 1 cut(s) 1288
NspI RCATGY 2 cut(s) 846, 944
OliI CACNNNNGTG 1 cut(s) 941
PacI TTAATTAA 1 cut(s) 441
PaeI GCATGC 1 cut(s) 846
PagI TCATGA 2 cut(s) 736, 1596
PaqCI CACCTGC 1 cut(s) 482
PdmI GAANNNNTTC 1 cut(s) 1796
PfeI GAWTC 9 cut(s) 611, 733, 868, 1240, 1487, 1649, 1746, 1838, 1975
PflFI GACNNNGTC 1 cut(s) 956
PkrI GCNGC 2 cut(s) 184, 848
Ple19I CGATCG 1 cut(s) 16
PleI GAGTC 2 cut(s) 933, 1169
PpsI GAGTC 2 cut(s) 933, 1169
PpuMI RGGWCCY 1 cut(s) 1825
PshBI ATTAAT 2 cut(s) 437, 441
Psp124BI GAGCTC 1 cut(s) 1604
Psp1406I AACGTT 1 cut(s) 714
Psp5II RGGWCCY 1 cut(s) 1825
PspEI GGTNACC 1 cut(s) 95
PspN4I GGNNCC 5 cut(s) 355, 590, 1128, 1416, 1827
PspPI GGNCC 3 cut(s) 589, 1126, 1825
PspPPI RGGWCCY 1 cut(s) 1825
PsuI RGATCY 3 cut(s) 248, 976, 1414
PsyI GACNNNGTC 1 cut(s) 956
PvuI CGATCG 1 cut(s) 16
RsaI GTAC 4 cut(s) 530, 799, 1720, 1866
RsaNI GTAC 4 cut(s) 529, 798, 1719, 1865
RseI CAYNNNNRTG 3 cut(s) 941, 965, 1456
SacI GAGCTC 1 cut(s) 1604
SalI GTCGAC 1 cut(s) 1941
SaqAI TTAA 8 cut(s) 437, 441, 705, 1151, 1247, 1260, 1427, 1926
SatI GCNGC 2 cut(s) 183, 847
Sau3AI GATC 6 cut(s) 13, 248, 976, 1201, 1297, 1414
Sau96I GGNCC 3 cut(s) 589, 1126, 1825
SchI GAGTC 2 cut(s) 934, 1169
ScrFI CCNGG 2 cut(s) 77, 851
SduI GDGCHC 6 cut(s) 177, 232, 907, 938, 1563, 1604
SfaNI GCATC 4 cut(s) 195, 207, 918, 1538
SfcI CTRYAG 1 cut(s) 519
SinI GGWCC 3 cut(s) 589, 1126, 1825
SmiI ATTTAAAT 1 cut(s) 1261
SmiMI CAYNNNNRTG 3 cut(s) 941, 965, 1456
SmlI CTYRAG 1 cut(s) 358
SmoI CTYRAG 1 cut(s) 358
SpeI ACTAGT 2 cut(s) 1183, 1730
SphI GCATGC 1 cut(s) 846
SsiI CCGC 8 cut(s) 141, 148, 202, 254, 327, 385, 477, 1124
SspI AATATT 1 cut(s) 562
SspMI CTAG 8 cut(s) 132, 242, 365, 585, 1068, 1184, 1605, 1731
SstI GAGCTC 1 cut(s) 1604
StyD4I CCNGG 2 cut(s) 75, 849
StyI CCWWGG 2 cut(s) 1098, 1821
SwaI ATTTAAAT 1 cut(s) 1261
TaaI ACNGT 4 cut(s) 1148, 1477, 1723, 1869
TaiI ACGT 4 cut(s) 530, 701, 717, 1948
TaqI TCGA 4 cut(s) 12, 26, 1138, 1942
TaqII GACCGA 1 cut(s) 1102
TfiI GAWTC 9 cut(s) 611, 733, 868, 1240, 1487, 1649, 1746, 1838, 1975
Tru1I TTAA 8 cut(s) 437, 441, 705, 1151, 1247, 1260, 1427, 1926
Tru9I TTAA 8 cut(s) 437, 441, 705, 1151, 1247, 1260, 1427, 1926
TscAI CASTG 5 cut(s) 729, 1063, 1234, 1300, 1546
TseFI GTSAC 2 cut(s) 95, 1616
TseI GCWGC 2 cut(s) 182, 846
Tsp45I GTSAC 2 cut(s) 95, 1616
TspRI CASTG 5 cut(s) 729, 1063, 1234, 1300, 1546
Tth111I GACNNNGTC 1 cut(s) 956
VneI GTGCAC 1 cut(s) 934
VpaK11BI GGWCC 3 cut(s) 589, 1126, 1825
VspI ATTAAT 2 cut(s) 437, 441
XapI RAATTY 4 cut(s) 398, 888, 1193, 1753
XbaI TCTAGA 1 cut(s) 1604
XceI RCATGY 2 cut(s) 846, 944
XcmI CCANNNNNNNNNTGG 2 cut(s) 68, 1516
XmiI GTMKAC 2 cut(s) 1160, 1942
XmnI GAANNNNTTC 1 cut(s) 1796
XspI CTAG 8 cut(s) 132, 242, 365, 585, 1068, 1184, 1605, 1731
ZraI GACGTC 1 cut(s) 1946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.