Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003574.1

Orthogroup ID

OG0004382

Physical Location & Seq

Genomic Coordinates Forward (+)

59758 .. 64458

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003574.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

atgctccaccaggtaaaacccctctgcccccatctccgccatctacggttggcccacttcaaggccccaaagcccccaaagccgccggaatcccctccgaagccgccaaaccctccccagaagcccgaaaccttcaccctccacgaccacacgtggcaggacccctacagttggatgtccaagctcaacgacaaggtcgccatgcgacacatggacatgtacatggaacaggaagacaagtacaccgaagctgtcatctggatgtccaagctcaacgacaaggtcgccatgcgacacatggacatgtacatggaacaggaagacaagtacaccgaagctgtcatgtacggcaccgaccgcctccagagcaagctccagtccgagatggcctcccgcttatccttcgacctctccactcctcccctcaaattcggaccatggttgtactaccggcgcgtggaggaaggtaagcagtttccggtgctgtgtcgtcgactcgcgagtttacacgacgagttcatttctcataagtcgccttctgctgggtttgattttacttccgggaagagaattgagcagaagctgattgattacaatcaagaagctcagagatttggaggttatgcatatgaagaattatcggaagtttcgccggatcatcggtttattgcttatacaatgtatgataaagacaaggacttgtttaggttgtctgttaggaacttgaattctggtgcattgtgtagtaagcctcaagcggagcgtgtttcgaatctggcttgggccaaagacgggcaggcattgctatatgttgttaccgatcagaacaagcggccatataggatgtattgtagcatgattggatcgactgatgaggacgttttggtttttgaagaatcggataataatgtgtttgtcaacattagacacacgaaagatttccggtttgtgactgtaaataccttctctaccgcgtcttccaaggtctttttgataaatgcagctgatccattgtcggggttgaacttagtttggcagtgtgaaggtatagcacattgcgtacttgagcatcaccaaggatatctttttctgtttacagatgctgccaaaggagggcagtcagttgataaccattatctccttcgtagtcctgtggattcttcgagcagtccaagaatatgggaggatgtattcgtcagtgacccagactgggtttttgaggatgtggatttcagtcatacacacttggtacttaatataagggaagggcgaaactttagactttgttctgttgctttacctttgcctgctgggaagatgccagatgctgtggttgattatgacctgtcaaatggaaactggaagatcattcaacagcagaatattcttcatgaaagaacaaaggttttgtatggaacagcttcttcagcaagcatcagtgagaaaaccttaaatatagataatttgaattctgcaaatgaagtcagccctgatgatcagcagttgtggaatgatctttctgagttttatgcttgtgaacagcataatgtctcttcttatgatggagtcttggttccattgactgttgtatactcttgcaaaaacaagaaagaggatcagaaccctggattgcttcatgtgcatggagcctatggtgagctactcgatagaaggtggcgcagtgagttgaaaagccttcttgatcggggttggatggttgcctatgctgatgttagaggtggaggcggtggaggtaagaagtggcatcatgatggaagatgtacaaagaagattaattccatcaaggattttatagcctgtgccaatttccttgttgacaaagaaattgtccatgaaaaaaagcttgctgcttcaggttatagtgctggaggacttgtagttgcttcagccatcaatcaatgcccacatttgtttactgctgcagttttgaaggttccatttttagatgcaacgagcactcttctctatcccattataccgctcacagctgttgactatgaagagtttggataccctggggacattaatgattttcatgctatacgtgactattctccatacgacaatattcagaaggatgttctctatccagctgtattgatatcctcgtctttcaatacacgttttggagcgtgggaagctgcaaaatgggttgcacgagttcgtgaacttacagtttacgacccaaagcgtccaatactgcttaatttgacaacagacatagtagaggaaaacaggtacctccagtgcaaggaatcggcactggagactgcatttcttataaaggcaatggaatggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0044424 GO:0044464 GO:0070011 GO:0070012 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

773

Amino Acids

88.31

Weight (kDa)

6.0

Isoelectric Point (pI)

48.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66960
fragaria_vesca	FvH4_1g14740 FvH4_1g14740 FvH4_1g14740 FvH4_1g14740 FvH4_1g14740
malus_domestica	MD15G1274800.v1.1
prunus_persica	Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1
pyrus_communis	pycom15g23790
rosa_chinensis	RchiOBHm_Chr1g0319111 RchiOBHm_Chr2g0103681
rosa_laevigata	RLG00000017248 RLG00000029580 RLG00000030483
rosa_multiflora	Rmu_sc0001852.1_g000011 Rmu_sc0003574.1_g000010 Rmu_sc0009469.1_g000007
rosa_roxburghii	Rroxscaffold_2G00139490 Rroxscaffold_4G00328470
rosa_rugosa	Rorug05G0248700
rosa_samantha	Rh1AG038700 Rh2AG165200 Rh2BG172400 Rh2CG171300 Rh2DG170800 Rh5CG361300
rosa_wichuraiana	Rw1G003040 Rw2G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2303
Acc65I	GGTACC	1 cut(s)	2259
AccB1I	GGYRCC	2 cut(s)	350, 2259
AccBSI	CCGCTC	1 cut(s)	2002
AccI	GTMKAC	2 cut(s)	493, 1590
AccII	CGCG	3 cut(s)	456, 500, 974
AclWI	GGATC	4 cut(s)	663, 871, 1001, 1623
AcoI	YGGCCR	1 cut(s)	833
AcsI	RAATTY	3 cut(s)	428, 727, 1468
AcuI	CTGAAG	3 cut(s)	1410, 1857, 1890
AcvI	CACGTG	1 cut(s)	153
AfiI	CCNNNNNNNGG	9 cut(s)	61, 171, 457, 542, 792, 1016, 1113, 1210, 2272
AflIII	ACRYGT	4 cut(s)	150, 216, 303, 2141
AgsI	TTSAA	9 cut(s)	61, 727, 893, 1024, 1373, 1468, 1690, 1951, 2137
AjnI	CCWGG	3 cut(s)	9, 1624, 2035
AloI	GAACNNNNNNTCC	2 cut(s)	1557, 1589
Alw21I	GWGCWC	1 cut(s)	1979
Alw26I	GTCTC	2 cut(s)	1555, 2282
AlwI	GGATC	4 cut(s)	663, 871, 1001, 1623
AlwNI	CAGNNNCTG	3 cut(s)	583, 1103, 1328
AoxI	GGCC	5 cut(s)	51, 63, 387, 783, 833
ApeKI	GCWGC	5 cut(s)	1001, 1103, 1868, 1940, 2162
ApoI	RAATTY	3 cut(s)	428, 727, 1468
ArsI	GACNNNNNNTTYG	4 cut(s)	1199, 1231, 1833, 1865
AseI	ATTAAT	2 cut(s)	1794, 2046
Asp700I	GAANNNNTTC	2 cut(s)	938, 1420
Asp718I	GGTACC	1 cut(s)	2259
AspLEI	GCGC	2 cut(s)	456, 1680
AspS9I	GGNCC	5 cut(s)	52, 64, 160, 434, 783
AsuC2I	CCSGG	1 cut(s)	562
AsuHPI	GGTGA	3 cut(s)	127, 1064, 1667
AsuII	TTCGAA	1 cut(s)	770
AvaII	GGWCC	2 cut(s)	160, 434
BanI	GGYRCC	2 cut(s)	350, 2259
BauI	CACGAG	1 cut(s)	2178
BbrPI	CACGTG	1 cut(s)	153
BbsI	GAAGAC	3 cut(s)	240, 327, 969
Bbv12I	GWGCWC	1 cut(s)	1979
BbvI	GCAGC	5 cut(s)	1013, 1090, 1855, 1927, 2149
BccI	CCATC	8 cut(s)	39, 48, 379, 1556, 1708, 1766, 1808, 1919
BceAI	ACGGC	1 cut(s)	364
BciT130I	CCWGG	3 cut(s)	11, 1626, 2037
BciVI	GTATCC	1 cut(s)	2024
BclI	TGATCA	1 cut(s)	1495
BcnI	CCSGG	1 cut(s)	562
BcoDI	GTCTC	2 cut(s)	1555, 2282
BfmI	CTRYAG	2 cut(s)	166, 1941
BfuI	GTATCC	1 cut(s)	2024
BisI	GCNGC	8 cut(s)	83, 104, 833, 1002, 1104, 1869, 1941, 2163
BlsI	GCNGC	8 cut(s)	84, 105, 834, 1003, 1105, 1870, 1942, 2164
Bme1390I	CCNGG	4 cut(s)	11, 562, 1626, 2037
Bme18I	GGWCC	2 cut(s)	160, 434
BmgT120I	GGNCC	5 cut(s)	52, 64, 160, 434, 783
BmiI	GGNNCC	7 cut(s)	66, 162, 352, 1575, 1648, 1956, 2261
BmrFI	CCNGG	4 cut(s)	11, 562, 1626, 2037
BmrI	ACTGGG	1 cut(s)	1219
BmsI	GCATC	7 cut(s)	1078, 1090, 1308, 1315, 1443, 1774, 1957
BmuI	ACTGGG	1 cut(s)	1219
BpiI	GAAGAC	3 cut(s)	240, 327, 969
BplI	GAGNNNNNCTC	2 cut(s)	374, 406
BpmI	CTGGAG	5 cut(s)	347, 359, 1908, 2249, 2306
Bpu14I	TTCGAA	1 cut(s)	770
BpuEI	CTTGAG	2 cut(s)	738, 1085
BpuMI	CCSGG	1 cut(s)	562
BsaAI	YACGTR	2 cut(s)	153, 2066
BsaBI	GATNNNNATC	1 cut(s)	594
BsaJI	CCNNGG	6 cut(s)	437, 981, 1075, 1624, 2035, 2036
BsaWI	WCCGGW	2 cut(s)	478, 942
BsaXI	ACNNNNNCTCC	4 cut(s)	1557, 1587, 1881, 1911
Bsc4I	CCNNNNNNNGG	9 cut(s)	61, 171, 457, 542, 792, 1016, 1113, 1210, 2272
Bse118I	RCCGGY	1 cut(s)	450
Bse1I	ACTGG	5 cut(s)	376, 1214, 1364, 2266, 2289
Bse3DI	GCAATG	3 cut(s)	800, 1054, 2316
Bse8I	GATNNNNATC	1 cut(s)	594
BseBI	CCWGG	3 cut(s)	11, 1626, 2037
BseDI	CCNNGG	6 cut(s)	437, 981, 1075, 1624, 2035, 2036
BseGI	GGATG	7 cut(s)	180, 267, 849, 1192, 1228, 1719, 2104
BseJI	GATNNNNATC	1 cut(s)	594
BseLI	CCNNNNNNNGG	9 cut(s)	61, 171, 457, 542, 792, 1016, 1113, 1210, 2272
BseMI	GCAATG	3 cut(s)	800, 1054, 2316
BseMII	CTCAG	2 cut(s)	620, 1512
BseNI	ACTGG	5 cut(s)	376, 1214, 1364, 2266, 2289
BseRI	GAGGAG	1 cut(s)	408
BseXI	GCAGC	5 cut(s)	1013, 1090, 1855, 1927, 2149
BseYI	CCCAGC	2 cut(s)	542, 1310
Bsh1236I	CGCG	3 cut(s)	456, 500, 974
Bsh1285I	CGRYCG	1 cut(s)	358
BshFI	GGCC	5 cut(s)	53, 65, 389, 785, 835
BshNI	GGYRCC	2 cut(s)	350, 2259
BsiEI	CGRYCG	1 cut(s)	358
BsiHKAI	GWGCWC	1 cut(s)	1979
BsiSI	CCGG	6 cut(s)	86, 451, 479, 561, 653, 943
BslFI	GGGAC	1 cut(s)	2054
BslI	CCNNNNNNNGG	9 cut(s)	61, 171, 457, 542, 792, 1016, 1113, 1210, 2272
BsmAI	GTCTC	2 cut(s)	1555, 2282
BsmFI	GGGAC	1 cut(s)	2054
BsnI	GGCC	5 cut(s)	53, 65, 389, 785, 835
Bsp119I	TTCGAA	1 cut(s)	770
Bsp1286I	GDGCHC	1 cut(s)	1979
Bsp1407I	TGTACA	3 cut(s)	219, 306, 1781
Bsp143I	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
Bsp19I	CCATGG	1 cut(s)	437
Bsp68I	TCGCGA	1 cut(s)	500
BspANI	GGCC	5 cut(s)	53, 65, 389, 785, 835
BspCNI	CTCAG	2 cut(s)	619, 1513
BspFNI	CGCG	3 cut(s)	456, 500, 974
BspHI	TCATGA	2 cut(s)	1390, 1768
BspLI	GGNNCC	7 cut(s)	66, 162, 352, 1575, 1648, 1956, 2261
BspMAI	CTGCAG	1 cut(s)	1945
BspPI	GGATC	4 cut(s)	663, 871, 1001, 1623
BspT104I	TTCGAA	1 cut(s)	770
BspT107I	GGYRCC	2 cut(s)	350, 2259
BsrBI	CCGCTC	1 cut(s)	2002
BsrDI	GCAATG	3 cut(s)	800, 1054, 2316
BsrFI	RCCGGY	1 cut(s)	450
BsrGI	TGTACA	3 cut(s)	219, 306, 1781
BsrI	ACTGG	5 cut(s)	376, 1214, 1364, 2266, 2289
BssAI	RCCGGY	1 cut(s)	450
BssECI	CCNNGG	6 cut(s)	437, 981, 1075, 1624, 2035, 2036
BssMI	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
BssNAI	GTATAC	1 cut(s)	1591
BssSI	CACGAG	1 cut(s)	2178
BssT1I	CCWWGG	3 cut(s)	437, 981, 1075
Bst1107I	GTATAC	1 cut(s)	1591
Bst2BI	CACGAG	1 cut(s)	2178
Bst2UI	CCWGG	3 cut(s)	11, 1626, 2037
Bst4CI	ACNGT	5 cut(s)	48, 170, 955, 1585, 2197
Bst6I	CTCTTC	4 cut(s)	560, 1558, 1986, 2016
BstAPI	GCANNNNNTGC	1 cut(s)	802
BstAUI	TGTACA	3 cut(s)	219, 306, 1781
BstBAI	YACGTR	2 cut(s)	153, 2066
BstBI	TTCGAA	1 cut(s)	770
BstC8I	GCNNGC	5 cut(s)	371, 798, 1308, 1432, 1866
BstDEI	CTNAG	3 cut(s)	606, 1027, 1521
BstDSI	CCRYGG	1 cut(s)	437
BstF5I	GGATG	7 cut(s)	180, 267, 849, 1192, 1228, 1719, 2104
BstFNI	CGCG	3 cut(s)	456, 500, 974
BstHHI	GCGC	2 cut(s)	456, 1680
BstKTI	GATC	9 cut(s)	658, 823, 866, 1009, 1368, 1498, 1516, 1618, 1705
BstMAI	GTCTC	2 cut(s)	1555, 2282
BstMBI	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
BstMCI	CGRYCG	1 cut(s)	358
BstMWI	GCNNNNNNNGC	7 cut(s)	79, 357, 366, 802, 1427, 1639, 2159
BstNI	CCWGG	3 cut(s)	11, 1626, 2037
BstNSI	RCATGY	2 cut(s)	220, 307
BstSCI	CCNGG	4 cut(s)	9, 560, 1624, 2035
BstSFI	CTRYAG	2 cut(s)	166, 1941
BstUI	CGCG	3 cut(s)	456, 500, 974
BstV1I	GCAGC	5 cut(s)	1013, 1090, 1855, 1927, 2149
BstV2I	GAAGAC	3 cut(s)	240, 327, 969
BstXI	CCANNNNNNTGG	1 cut(s)	1179
BstZ17I	GTATAC	1 cut(s)	1591
BsuI	GTATCC	1 cut(s)	2024
BsuRI	GGCC	5 cut(s)	53, 65, 389, 785, 835
BtgI	CCRYGG	1 cut(s)	437
BtsCI	GGATG	7 cut(s)	180, 267, 849, 1192, 1228, 1719, 2104
BtsI	GCAGTG	2 cut(s)	1043, 1687
BtsIMutI	CAGTG	6 cut(s)	1043, 1204, 1444, 1687, 2273, 2282
BtuMI	TCGCGA	1 cut(s)	500
Cac8I	GCNNGC	5 cut(s)	371, 798, 1308, 1432, 1866
CaiI	CAGNNNCTG	3 cut(s)	583, 1103, 1328
CciI	TCATGA	2 cut(s)	1390, 1768
CfoI	GCGC	2 cut(s)	456, 1680
Cfr10I	RCCGGY	1 cut(s)	450
Cfr13I	GGNCC	5 cut(s)	52, 64, 160, 434, 783
CseI	GACGC	2 cut(s)	963, 2201
CsiI	ACCWGGT	1 cut(s)	9
DdeI	CTNAG	3 cut(s)	606, 1027, 1521
DpnI	GATC	9 cut(s)	657, 822, 865, 1008, 1367, 1497, 1515, 1617, 1704
DpnII	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
EaeI	YGGCCR	1 cut(s)	833
Eam1104I	CTCTTC	4 cut(s)	560, 1558, 1986, 2016
EarI	CTCTTC	4 cut(s)	560, 1558, 1986, 2016
EciI	GGCGGA	1 cut(s)	26
Eco130I	CCWWGG	3 cut(s)	437, 981, 1075
Eco32I	GATATC	2 cut(s)	1082, 2124
Eco47I	GGWCC	2 cut(s)	160, 434
Eco57I	CTGAAG	3 cut(s)	1410, 1857, 1890
Eco72I	CACGTG	1 cut(s)	153
EcoO109I	RGGNCCY	2 cut(s)	64, 160
EcoRI	GAATTC	2 cut(s)	727, 1468
EcoRII	CCWGG	3 cut(s)	9, 1624, 2035
EcoRV	GATATC	2 cut(s)	1082, 2124
EcoT14I	CCWWGG	3 cut(s)	437, 981, 1075
EcoT22I	ATGCAT	1 cut(s)	628
ErhI	CCWWGG	3 cut(s)	437, 981, 1075
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FaqI	GGGAC	1 cut(s)	2054
FauI	CCCGC	1 cut(s)	401
FauNDI	CATATG	1 cut(s)	628
FbaI	TGATCA	1 cut(s)	1495
FblI	GTMKAC	2 cut(s)	493, 1590
Fnu4HI	GCNGC	8 cut(s)	83, 104, 833, 1002, 1104, 1869, 1941, 2163
FokI	GGATG	7 cut(s)	187, 274, 856, 1199, 1235, 1726, 2111
Fsp4HI	GCNGC	8 cut(s)	83, 104, 833, 1002, 1104, 1869, 1941, 2163
GlaI	GCGC	2 cut(s)	455, 1679
GluI	GCNGC	8 cut(s)	83, 104, 833, 1002, 1104, 1869, 1941, 2163
GsaI	CCCAGC	2 cut(s)	546, 1314
GsuI	CTGGAG	5 cut(s)	347, 359, 1908, 2249, 2306
HaeIII	GGCC	5 cut(s)	53, 65, 389, 785, 835
HapII	CCGG	6 cut(s)	86, 451, 479, 561, 653, 943
HgaI	GACGC	2 cut(s)	963, 2201
HhaI	GCGC	2 cut(s)	456, 1680
Hin6I	GCGC	2 cut(s)	454, 1678
HinP1I	GCGC	2 cut(s)	454, 1678
HincII	GTYRAC	4 cut(s)	494, 919, 1837, 2014
HindII	GTYRAC	4 cut(s)	494, 919, 1837, 2014
HindIII	AAGCTT	1 cut(s)	1862
HinfI	GANTC	7 cut(s)	89, 495, 772, 896, 1157, 1566, 2276
HpaII	CCGG	6 cut(s)	86, 451, 479, 561, 653, 943
HphI	GGTGA	3 cut(s)	127, 1064, 1667
Hpy188III	TCNNGA	8 cut(s)	259, 364, 499, 599, 1391, 1700, 1769, 2186
Hpy99I	CGWCG	2 cut(s)	495, 515
HpyCH4III	ACNGT	5 cut(s)	48, 170, 955, 1585, 2197
HpyCH4IV	ACGT	4 cut(s)	152, 879, 2065, 2143
HpyF10VI	GCNNNNNNNGC	7 cut(s)	79, 357, 366, 802, 1427, 1639, 2159
HpyF3I	CTNAG	3 cut(s)	606, 1027, 1521
HpySE526I	ACGT	4 cut(s)	152, 879, 2065, 2143
HspAI	GCGC	2 cut(s)	454, 1678
KpnI	GGTACC	1 cut(s)	2263
Ksp22I	TGATCA	1 cut(s)	1495
Kzo9I	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
LmnI	GCTCC	5 cut(s)	9, 378, 760, 1646, 2150
Lsp1109I	GCAGC	5 cut(s)	1013, 1090, 1855, 1927, 2149
LweI	GCATC	7 cut(s)	1078, 1090, 1308, 1315, 1443, 1774, 1957
MabI	ACCWGGT	1 cut(s)	9
MaeII	ACGT	4 cut(s)	152, 879, 2065, 2143
MaeIII	GTNAC	4 cut(s)	814, 949, 1199, 2066
MalI	GATC	9 cut(s)	657, 822, 865, 1008, 1367, 1497, 1515, 1617, 1704
MbiI	CCGCTC	1 cut(s)	2002
MboI	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
MhlI	GDGCHC	1 cut(s)	1979
MlyI	GAGTC	2 cut(s)	489, 1575
MmeI	TCCRAC	2 cut(s)	152, 1691
Mph1103I	ATGCAT	1 cut(s)	628
MroXI	GAANNNNTTC	2 cut(s)	938, 1420
MseI	TTAA	5 cut(s)	1254, 1451, 1794, 2046, 2226
MslI	CAYNNNNRTG	7 cut(s)	215, 221, 260, 302, 308, 1641, 1770
MspA1I	CMGCKG	3 cut(s)	1004, 2009, 2114
MspI	CCGG	6 cut(s)	86, 451, 479, 561, 653, 943
MspR9I	CCNGG	4 cut(s)	11, 562, 1626, 2037
MvaI	CCWGG	3 cut(s)	11, 1626, 2037
MvnI	CGCG	3 cut(s)	456, 500, 974
MwoI	GCNNNNNNNGC	7 cut(s)	79, 357, 366, 802, 1427, 1639, 2159
NciI	CCSGG	1 cut(s)	562
NcoI	CCATGG	1 cut(s)	437
NdeI	CATATG	1 cut(s)	628
NdeII	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
NlaIV	GGNNCC	7 cut(s)	66, 162, 352, 1575, 1648, 1956, 2261
NmuCI	GTSAC	3 cut(s)	949, 1199, 2066
NruI	TCGCGA	1 cut(s)	500
NsiI	ATGCAT	1 cut(s)	628
NspI	RCATGY	2 cut(s)	220, 307
NspV	TTCGAA	1 cut(s)	770
PagI	TCATGA	2 cut(s)	1390, 1768
PasI	CCCWGGG	1 cut(s)	2036
PciI	ACATGT	2 cut(s)	216, 303
PdmI	GAANNNNTTC	2 cut(s)	938, 1420
PfeI	GAWTC	5 cut(s)	89, 772, 896, 1157, 2276
PflFI	GACNNNGTC	2 cut(s)	194, 281
PfoI	TCCNGGA	1 cut(s)	560
PkrI	GCNGC	8 cut(s)	84, 105, 834, 1003, 1105, 1870, 1942, 2164
PleI	GAGTC	2 cut(s)	489, 1574
PmaCI	CACGTG	1 cut(s)	153
PmlI	CACGTG	1 cut(s)	153
PpsI	GAGTC	2 cut(s)	489, 1574
Ppu21I	YACGTR	2 cut(s)	153, 2066
PpuMI	RGGWCCY	1 cut(s)	160
PscI	ACATGT	2 cut(s)	216, 303
PshBI	ATTAAT	2 cut(s)	1794, 2046
PsiI	TTATAA	1 cut(s)	2303
Psp5II	RGGWCCY	1 cut(s)	160
Psp6I	CCWGG	3 cut(s)	9, 1624, 2035
PspCI	CACGTG	1 cut(s)	153
PspFI	CCCAGC	2 cut(s)	542, 1310
PspGI	CCWGG	3 cut(s)	9, 1624, 2035
PspN4I	GGNNCC	7 cut(s)	66, 162, 352, 1575, 1648, 1956, 2261
PspPI	GGNCC	5 cut(s)	52, 64, 160, 434, 783
PspPPI	RGGWCCY	1 cut(s)	160
PstI	CTGCAG	1 cut(s)	1945
PstNI	CAGNNNCTG	3 cut(s)	583, 1103, 1328
PsyI	GACNNNGTC	2 cut(s)	194, 281
PvuII	CAGCTG	3 cut(s)	1004, 2009, 2114
RruI	TCGCGA	1 cut(s)	500
RseI	CAYNNNNRTG	7 cut(s)	215, 221, 260, 302, 308, 1641, 1770
SalI	GTCGAC	1 cut(s)	492
SaqAI	TTAA	5 cut(s)	1254, 1451, 1794, 2046, 2226
SatI	GCNGC	8 cut(s)	83, 104, 833, 1002, 1104, 1869, 1941, 2163
Sau3AI	GATC	9 cut(s)	655, 820, 863, 1006, 1365, 1495, 1513, 1615, 1702
Sau96I	GGNCC	5 cut(s)	52, 64, 160, 434, 783
SchI	GAGTC	2 cut(s)	489, 1575
ScrFI	CCNGG	4 cut(s)	11, 562, 1626, 2037
SduI	GDGCHC	1 cut(s)	1979
SexAI	ACCWGGT	1 cut(s)	9
SfaNI	GCATC	7 cut(s)	1078, 1090, 1308, 1315, 1443, 1774, 1957
SfcI	CTRYAG	2 cut(s)	166, 1941
SfuI	TTCGAA	1 cut(s)	770
SinI	GGWCC	2 cut(s)	160, 434
SmiMI	CAYNNNNRTG	7 cut(s)	215, 221, 260, 302, 308, 1641, 1770
SmlI	CTYRAG	2 cut(s)	753, 1064
SmoI	CTYRAG	2 cut(s)	753, 1064
SspI	AATATT	2 cut(s)	1384, 2089
StyD4I	CCNGG	4 cut(s)	9, 560, 1624, 2035
StyI	CCWWGG	3 cut(s)	437, 981, 1075
TaaI	ACNGT	5 cut(s)	48, 170, 955, 1585, 2197
TaiI	ACGT	4 cut(s)	155, 882, 2068, 2146
TaqI	TCGA	6 cut(s)	405, 493, 770, 866, 1163, 1665
TatI	WGTACW	6 cut(s)	219, 240, 306, 327, 444, 1781
TauI	GCSGC	3 cut(s)	85, 106, 835
TfiI	GAWTC	5 cut(s)	89, 772, 896, 1157, 2276
Tru1I	TTAA	5 cut(s)	1254, 1451, 1794, 2046, 2226
Tru9I	TTAA	5 cut(s)	1254, 1451, 1794, 2046, 2226
TscAI	CASTG	6 cut(s)	1043, 1204, 1444, 1687, 2273, 2289
TseFI	GTSAC	3 cut(s)	949, 1199, 2066
TseI	GCWGC	5 cut(s)	1001, 1103, 1868, 1940, 2162
Tsp45I	GTSAC	3 cut(s)	949, 1199, 2066
TspDTI	ATGAA	9 cut(s)	508, 645, 1379, 1407, 1494, 1625, 1869, 2034, 2045
TspRI	CASTG	6 cut(s)	1043, 1204, 1444, 1687, 2273, 2289
Tth111I	GACNNNGTC	2 cut(s)	194, 281
VpaK11BI	GGWCC	2 cut(s)	160, 434
VspI	ATTAAT	2 cut(s)	1794, 2046
XapI	RAATTY	3 cut(s)	428, 727, 1468
XceI	RCATGY	2 cut(s)	220, 307
XcmI	CCANNNNNNNNNTGG	2 cut(s)	208, 295
XmiI	GTMKAC	2 cut(s)	493, 1590
XmnI	GAANNNNTTC	2 cut(s)	938, 1420
Zsp2I	ATGCAT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.