Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004382

Physical Location & Seq

Genomic Coordinates Forward (+)

61482520 .. 61488605

Gene Structure 6086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00328470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGTCCAAGCTCAACGAAAAGGTCGCCATGCGACACATGGACATGTACATGGAACAGGAAGACAAATACACCGAAGCTGTCATGTACGGCACCGACCGCCTCCGCAGCAAGCTCCGGTCCGAGATGGCCTCCCGCTTATCCTTCGACCTCTCCACTCCTCCCCTCAAATTCGGACCATGGTTGTACTACCGGCGCGTGGAGGAAGGTAAGCAGTTTCCGGTGCTGTGTCGTCGACTCGCGAGTTTACACGACGAGTTCATTTCTCATAAGTCGCCTTCTGCTGGGTTTGATTTTACTTCCGGGAAGAGAATTGAGCAGAAGCTTATTGATTACAATCAAGAAGCTCAAAGATTTGGAGGTTATGCATATGAAGAATTATCGGAAGTTTCGCCGGATCATCGGTTTATTGCTTATGCAATGTATGATAAAGACAAGGACTTGTTTAGGTTGTCTGTTAGGAACTTGAATTCTGGTGCATTGTGTAGTAAGCCTCAAGCGGAGCGTGTTTCGAATTTGGCTTGGGCCAAAGACGGGCAGGCATTGCTTTATGTTGTTACCGATCAGAACAAGCGGCCATATAGGATGTATTGTAGCATGATTGGATCGACTGATGAGGACGTTTTGGTTTTTGAAGAATCGGATAATAATGTGTTTGTCAACATTAGACACACGAAAAATTTCCAGTTTGTGACTGTAAATACCTTCTCTACCGCGTCTTCCAAGGTCTTTTTGATAAATGCAGCTGATCCATTGTCGGGGTTGAACTTAGTTTGGCAGTGTGATGGTATAGCGCATTGCGTACTTGAGCATCACCAAGGATATCTTTTTCTGTTTACAGATGCTGCCAAAGGAGGGCAGTCAGTTGATAACCATTATCTCCTTCGTAGTCCTGTGGATTCTTCGAGCAGTCCAAGAATATGGGAGGATGTATTTGTCAGTGACCCAGACTGGGTTTTTGAGGATGTGGATTTCAGTCATACACACTTGGTACTTAATATAAGGGAAGGGCGAAACTTTAGACTTTGTTCTGTTGCTTTACCTTTGCCTGCTGGGAAGGGACCAGTTCATCTAAAAGAGCTTCACCCACAATTCTTGCCTCTTCCAAAATATGTTTCGCAAATTTCACCTGGACCAAATTATGACTACCATTCATCAAAGATGCGCTTTACAATATCGTCACCTGTGATGCCAGATGCTGTGGTTGATTATGACCTGTCAAATGGAAACTGGAAGATCATTCAACAGCAGAATATTCTTCATGAAAGAACAAAGGTTTTGTATGGAACAGCTTCTTCAGCAAGCATCAGCGAGAAAACCTTAAATACAGATAATTTGAGTTCTGCAAATGAAGTCAGCCCTGATGATCAGCAGTTGTGGAATGATCTTTCTGAGTTTTATGCTTGTGAACAGCATAATAAAGAGGATCAGAACCCTGGATTGCTTCATGTGCATGGAGCTTATGGTGAGCTACTCGATAAAAGGTGGCGCAGTGAGTTGAAAAGCCTTCTTGATCGTGGTTGGATGGTTGCCTATGCTGATGTTAGAGGTGGAGGCGGTGGAGGTAAGAAGTGGCATCATGATGGAAGATGTACAAAGAAGATTAATTCCATCAAGGATTTTATAGCCTGTGCCAATTTCCTTGTTGACAAAGAAATTGTCCATGAAAAAAAGCTCGCTGCTTCAGGTTATAGTGCTGGAGGACTTGTAGTTGCTTCAGCCATCAATCAATGCCCACATTTGTTTACTGCTGCAGTTTTGAAGGTTCCATTTTTAGATGCAACGAGCACTCTTCTCTATCCCATTATACCGCTCACAGCTGTTGACTATGAAGAGTTTGGATACCCTGGGGACATTAATGATTTTCATGCTATACGTGACTATTCTCCATACGACAATATTCAGAAGGATGTTCTCTATCCAGCTGTATTGATATCCTCGTCTTTCAATACACGTTTTGGAGTGTGGGAAGCTGCAAAATGGGTTGCACGAGTTCGTGAACTTACAGTTTACGACCCAAAGCGTCCAATACTGCTTAATTTGACAACAGACATAGTAGAGGAAAACAGGTACCTCCAGTGCAAGGAATCGGCACTAGAGACTGCATTTCTTATAAAGGCAATGGAATCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0044424 GO:0044464 GO:0070011 GO:0070012 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

709

Amino Acids

80.51

Weight (kDa)

5.93

Isoelectric Point (pI)

48.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S9_N	PF02897	15 - 416	1e-36	Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_S9	PF00326	497 - 666	1.6e-34	Prolyl oligopeptidase family
Hydrolase_4	PF12146	500 - 597	5.8e-06	Serine aminopeptidase, S33

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66960
fragaria_vesca	FvH4_1g14740 FvH4_1g14740 FvH4_1g14740 FvH4_1g14740 FvH4_1g14740
malus_domestica	MD15G1274800.v1.1
prunus_persica	Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1
pyrus_communis	pycom15g23790
rosa_chinensis	RchiOBHm_Chr1g0319111 RchiOBHm_Chr2g0103681
rosa_laevigata	RLG00000017248 RLG00000029580 RLG00000030483
rosa_multiflora	Rmu_sc0001852.1_g000011 Rmu_sc0003574.1_g000010 Rmu_sc0009469.1_g000007
rosa_roxburghii	Rroxscaffold_2G00139490 Rroxscaffold_4G00328470
rosa_rugosa	Rorug05G0248700
rosa_samantha	Rh1AG038700 Rh2AG165200 Rh2BG172400 Rh2CG171300 Rh2DG170800 Rh5CG361300
rosa_wichuraiana	Rw1G003040 Rw2G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2111
Acc65I	GGTACC	1 cut(s)	2067
AccB1I	GGYRCC	2 cut(s)	89, 2067
AccBSI	CCGCTC	1 cut(s)	1810
AccI	GTMKAC	1 cut(s)	232
AccII	CGCG	3 cut(s)	195, 239, 713
AciI	CCGC	8 cut(s)	97, 103, 133, 497, 571, 711, 1554, 1808
AclWI	GGATC	4 cut(s)	402, 610, 740, 1431
AcoI	YGGCCR	1 cut(s)	572
AcsI	RAATTY	5 cut(s)	167, 466, 511, 676, 1119
AcuI	CTGAAG	3 cut(s)	1278, 1665, 1698
AfaI	GTAC	7 cut(s)	47, 86, 185, 801, 990, 1591, 2069
AfiI	CCNNNNNNNGG	7 cut(s)	196, 281, 531, 755, 852, 949, 2080
AflIII	ACRYGT	2 cut(s)	42, 1949
AgsI	TTSAA	7 cut(s)	466, 632, 763, 1241, 1498, 1759, 1945
AjnI	CCWGG	3 cut(s)	1126, 1432, 1843
AjuI	GAANNNNNNNTTGG	2 cut(s)	1096, 1128
Alw21I	GWGCWC	1 cut(s)	1787
Alw26I	GTCTC	1 cut(s)	2090
AlwI	GGATC	4 cut(s)	402, 610, 740, 1431
AlwNI	CAGNNNCTG	2 cut(s)	842, 1196
AoxI	GGCC	3 cut(s)	126, 522, 572
ApeKI	GCWGC	6 cut(s)	105, 740, 842, 1676, 1748, 1970
ApoI	RAATTY	5 cut(s)	167, 466, 511, 676, 1119
ArsI	GACNNNNNNTTYG	4 cut(s)	938, 970, 1641, 1673
AseI	ATTAAT	2 cut(s)	1602, 1854
Asp700I	GAANNNNTTC	2 cut(s)	677, 1288
Asp718I	GGTACC	1 cut(s)	2067
AspLEI	GCGC	4 cut(s)	195, 793, 1164, 1488
AspS9I	GGNCC	5 cut(s)	117, 173, 522, 1058, 1130
AsuC2I	CCSGG	1 cut(s)	301
AsuHPI	GGTGA	5 cut(s)	803, 1073, 1116, 1170, 1475
AsuII	TTCGAA	1 cut(s)	509
AvaII	GGWCC	4 cut(s)	117, 173, 1058, 1130
BanI	GGYRCC	2 cut(s)	89, 2067
BauI	CACGAG	1 cut(s)	1986
BbsI	GAAGAC	2 cut(s)	66, 708
Bbv12I	GWGCWC	1 cut(s)	1787
BbvI	GCAGC	6 cut(s)	117, 752, 829, 1663, 1735, 1957
BccI	CCATC	6 cut(s)	118, 776, 1516, 1574, 1616, 1727
BceAI	ACGGC	1 cut(s)	103
BcgI	CGANNNNNNTGC	1 cut(s)	2106
BciT130I	CCWGG	3 cut(s)	1128, 1434, 1845
BciVI	GTATCC	1 cut(s)	1832
BclI	TGATCA	1 cut(s)	1363
BcnI	CCSGG	1 cut(s)	301
BcoDI	GTCTC	1 cut(s)	2090
BfaI	CTAG	1 cut(s)	2093
BfmI	CTRYAG	1 cut(s)	1749
BfuI	GTATCC	1 cut(s)	1832
BisI	GCNGC	7 cut(s)	106, 572, 741, 843, 1677, 1749, 1971
BlsI	GCNGC	7 cut(s)	107, 573, 742, 844, 1678, 1750, 1972
Bme1390I	CCNGG	4 cut(s)	301, 1128, 1434, 1845
Bme18I	GGWCC	4 cut(s)	117, 173, 1058, 1130
BmgT120I	GGNCC	5 cut(s)	117, 173, 522, 1058, 1130
BmiI	GGNNCC	4 cut(s)	91, 1059, 1764, 2069
BmrFI	CCNGG	4 cut(s)	301, 1128, 1434, 1845
BmrI	ACTGGG	1 cut(s)	958
BmsI	GCATC	8 cut(s)	817, 829, 1149, 1176, 1183, 1311, 1582, 1765
BmuI	ACTGGG	1 cut(s)	958
BpiI	GAAGAC	2 cut(s)	66, 708
BplI	GAGNNNNNCTC	2 cut(s)	113, 145
BpmI	CTGGAG	2 cut(s)	1716, 2057
Bpu14I	TTCGAA	1 cut(s)	509
BpuEI	CTTGAG	2 cut(s)	477, 824
BpuMI	CCSGG	1 cut(s)	301
BsaAI	YACGTR	1 cut(s)	1874
BsaBI	GATNNNNATC	1 cut(s)	333
BsaJI	CCNNGG	6 cut(s)	176, 720, 814, 1432, 1843, 1844
BsaWI	WCCGGW	2 cut(s)	114, 217
BsaXI	ACNNNNNCTCC	2 cut(s)	1689, 1719
Bsc4I	CCNNNNNNNGG	7 cut(s)	196, 281, 531, 755, 852, 949, 2080
Bse118I	RCCGGY	1 cut(s)	189
Bse1I	ACTGG	5 cut(s)	682, 953, 1061, 1232, 2074
Bse3DI	GCAATG	4 cut(s)	423, 539, 793, 2124
Bse8I	GATNNNNATC	1 cut(s)	333
BseBI	CCWGG	3 cut(s)	1128, 1434, 1845
BseDI	CCNNGG	6 cut(s)	176, 720, 814, 1432, 1843, 1844
BseGI	GGATG	5 cut(s)	588, 931, 967, 1527, 1912
BseJI	GATNNNNATC	1 cut(s)	333
BseLI	CCNNNNNNNGG	7 cut(s)	196, 281, 531, 755, 852, 949, 2080
BseMI	GCAATG	4 cut(s)	423, 539, 793, 2124
BseMII	CTCAG	1 cut(s)	1380
BseNI	ACTGG	5 cut(s)	682, 953, 1061, 1232, 2074
BseRI	GAGGAG	1 cut(s)	147
BseXI	GCAGC	6 cut(s)	117, 752, 829, 1663, 1735, 1957
BseYI	CCCAGC	2 cut(s)	281, 1049
Bsh1236I	CGCG	3 cut(s)	195, 239, 713
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	3 cut(s)	128, 524, 574
BshNI	GGYRCC	2 cut(s)	89, 2067
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	1 cut(s)	1787
BsiSI	CCGG	5 cut(s)	115, 190, 218, 300, 392
BslFI	GGGAC	2 cut(s)	1071, 1862
BslI	CCNNNNNNNGG	7 cut(s)	196, 281, 531, 755, 852, 949, 2080
BsmAI	GTCTC	1 cut(s)	2090
BsmFI	GGGAC	2 cut(s)	1071, 1862
BsnI	GGCC	3 cut(s)	128, 524, 574
Bsp119I	TTCGAA	1 cut(s)	509
Bsp1286I	GDGCHC	1 cut(s)	1787
Bsp1407I	TGTACA	2 cut(s)	45, 1589
Bsp143I	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
Bsp19I	CCATGG	1 cut(s)	176
Bsp68I	TCGCGA	1 cut(s)	239
BspACI	CCGC	8 cut(s)	97, 103, 133, 497, 571, 711, 1554, 1808
BspANI	GGCC	3 cut(s)	128, 524, 574
BspCNI	CTCAG	1 cut(s)	1381
BspFNI	CGCG	3 cut(s)	195, 239, 713
BspHI	TCATGA	2 cut(s)	1258, 1576
BspLI	GGNNCC	4 cut(s)	91, 1059, 1764, 2069
BspMAI	CTGCAG	1 cut(s)	1753
BspPI	GGATC	4 cut(s)	402, 610, 740, 1431
BspT104I	TTCGAA	1 cut(s)	509
BspT107I	GGYRCC	2 cut(s)	89, 2067
BsrBI	CCGCTC	1 cut(s)	1810
BsrDI	GCAATG	4 cut(s)	423, 539, 793, 2124
BsrFI	RCCGGY	1 cut(s)	189
BsrGI	TGTACA	2 cut(s)	45, 1589
BsrI	ACTGG	5 cut(s)	682, 953, 1061, 1232, 2074
BssAI	RCCGGY	1 cut(s)	189
BssECI	CCNNGG	6 cut(s)	176, 720, 814, 1432, 1843, 1844
BssMI	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
BssSI	CACGAG	1 cut(s)	1986
BssT1I	CCWWGG	3 cut(s)	176, 720, 814
Bst2BI	CACGAG	1 cut(s)	1986
Bst2UI	CCWGG	3 cut(s)	1128, 1434, 1845
Bst4CI	ACNGT	2 cut(s)	694, 2005
Bst6I	CTCTTC	4 cut(s)	299, 1104, 1794, 1824
BstAPI	GCANNNNNTGC	1 cut(s)	541
BstAUI	TGTACA	2 cut(s)	45, 1589
BstBAI	YACGTR	1 cut(s)	1874
BstBI	TTCGAA	1 cut(s)	509
BstC8I	GCNNGC	5 cut(s)	110, 537, 1047, 1300, 1674
BstDEI	CTNAG	2 cut(s)	766, 1389
BstDSI	CCRYGG	1 cut(s)	176
BstF5I	GGATG	5 cut(s)	588, 931, 967, 1527, 1912
BstFNI	CGCG	3 cut(s)	195, 239, 713
BstHHI	GCGC	4 cut(s)	195, 793, 1164, 1488
BstKTI	GATC	9 cut(s)	397, 562, 605, 748, 1236, 1366, 1384, 1426, 1513
BstMAI	GTCTC	1 cut(s)	2090
BstMBI	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 105, 541, 1295, 1447
BstNI	CCWGG	3 cut(s)	1128, 1434, 1845
BstNSI	RCATGY	1 cut(s)	46
BstSCI	CCNGG	4 cut(s)	299, 1126, 1432, 1843
BstSFI	CTRYAG	1 cut(s)	1749
BstUI	CGCG	3 cut(s)	195, 239, 713
BstV1I	GCAGC	6 cut(s)	117, 752, 829, 1663, 1735, 1957
BstV2I	GAAGAC	2 cut(s)	66, 708
BstXI	CCANNNNNNTGG	1 cut(s)	918
BsuI	GTATCC	1 cut(s)	1832
BsuRI	GGCC	3 cut(s)	128, 524, 574
BtgI	CCRYGG	1 cut(s)	176
BtsCI	GGATG	5 cut(s)	588, 931, 967, 1527, 1912
BtsI	GCAGTG	2 cut(s)	782, 1495
BtsIMutI	CAGTG	4 cut(s)	782, 943, 1495, 2081
BtuMI	TCGCGA	1 cut(s)	239
Cac8I	GCNNGC	5 cut(s)	110, 537, 1047, 1300, 1674
CaiI	CAGNNNCTG	2 cut(s)	842, 1196
CciI	TCATGA	2 cut(s)	1258, 1576
CfoI	GCGC	4 cut(s)	195, 793, 1164, 1488
Cfr10I	RCCGGY	1 cut(s)	189
Cfr13I	GGNCC	5 cut(s)	117, 173, 522, 1058, 1130
CpoI	CGGWCCG	1 cut(s)	117
CseI	GACGC	2 cut(s)	702, 2009
Csp6I	GTAC	7 cut(s)	46, 85, 184, 800, 989, 1590, 2068
CspCI	CAANNNNNGTGG	2 cut(s)	1074, 1109
CspI	CGGWCCG	1 cut(s)	117
CviQI	GTAC	7 cut(s)	46, 85, 184, 800, 989, 1590, 2068
DdeI	CTNAG	2 cut(s)	766, 1389
DpnI	GATC	9 cut(s)	396, 561, 604, 747, 1235, 1365, 1383, 1425, 1512
DpnII	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
EaeI	YGGCCR	1 cut(s)	572
Eam1104I	CTCTTC	4 cut(s)	299, 1104, 1794, 1824
EarI	CTCTTC	4 cut(s)	299, 1104, 1794, 1824
Eco130I	CCWWGG	3 cut(s)	176, 720, 814
Eco32I	GATATC	2 cut(s)	821, 1932
Eco47I	GGWCC	4 cut(s)	117, 173, 1058, 1130
Eco57I	CTGAAG	3 cut(s)	1278, 1665, 1698
EcoRI	GAATTC	1 cut(s)	466
EcoRII	CCWGG	3 cut(s)	1126, 1432, 1843
EcoRV	GATATC	2 cut(s)	821, 1932
EcoT14I	CCWWGG	3 cut(s)	176, 720, 814
EcoT22I	ATGCAT	1 cut(s)	367
ErhI	CCWWGG	3 cut(s)	176, 720, 814
FalI	AAGNNNNNCTT	4 cut(s)	807, 839, 1148, 1180
FaqI	GGGAC	2 cut(s)	1071, 1862
FauI	CCCGC	1 cut(s)	140
FauNDI	CATATG	1 cut(s)	367
FbaI	TGATCA	1 cut(s)	1363
FblI	GTMKAC	1 cut(s)	232
Fnu4HI	GCNGC	7 cut(s)	106, 572, 741, 843, 1677, 1749, 1971
FokI	GGATG	5 cut(s)	595, 938, 974, 1534, 1919
Fsp4HI	GCNGC	7 cut(s)	106, 572, 741, 843, 1677, 1749, 1971
FspBI	CTAG	1 cut(s)	2093
GlaI	GCGC	4 cut(s)	194, 792, 1163, 1487
GluI	GCNGC	7 cut(s)	106, 572, 741, 843, 1677, 1749, 1971
GsaI	CCCAGC	2 cut(s)	285, 1053
GsuI	CTGGAG	2 cut(s)	1716, 2057
HaeIII	GGCC	3 cut(s)	128, 524, 574
HapII	CCGG	5 cut(s)	115, 190, 218, 300, 392
HgaI	GACGC	2 cut(s)	702, 2009
HhaI	GCGC	4 cut(s)	195, 793, 1164, 1488
Hin6I	GCGC	4 cut(s)	193, 791, 1162, 1486
HinP1I	GCGC	4 cut(s)	193, 791, 1162, 1486
HincII	GTYRAC	4 cut(s)	233, 658, 1645, 1822
HindII	GTYRAC	4 cut(s)	233, 658, 1645, 1822
HindIII	AAGCTT	1 cut(s)	320
HinfI	GANTC	5 cut(s)	234, 635, 896, 2084, 2123
HpaII	CCGG	5 cut(s)	115, 190, 218, 300, 392
HphI	GGTGA	5 cut(s)	803, 1073, 1116, 1170, 1475
Hpy188I	TCNGA	8 cut(s)	121, 173, 382, 564, 640, 1390, 1428, 1902
Hpy188III	TCNNGA	6 cut(s)	238, 338, 1259, 1508, 1577, 1994
Hpy99I	CGWCG	2 cut(s)	234, 254
HpyCH4III	ACNGT	2 cut(s)	694, 2005
HpyCH4IV	ACGT	3 cut(s)	618, 1873, 1951
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 105, 541, 1295, 1447
HpyF3I	CTNAG	2 cut(s)	766, 1389
HpySE526I	ACGT	3 cut(s)	618, 1873, 1951
HspAI	GCGC	4 cut(s)	193, 791, 1162, 1486
KpnI	GGTACC	1 cut(s)	2071
Ksp22I	TGATCA	1 cut(s)	1363
Kzo9I	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
LmnI	GCTCC	3 cut(s)	117, 499, 1454
Lsp1109I	GCAGC	6 cut(s)	117, 752, 829, 1663, 1735, 1957
LweI	GCATC	8 cut(s)	817, 829, 1149, 1176, 1183, 1311, 1582, 1765
MaeI	CTAG	1 cut(s)	2093
MaeII	ACGT	3 cut(s)	618, 1873, 1951
MaeIII	GTNAC	5 cut(s)	553, 688, 938, 1176, 1874
MalI	GATC	9 cut(s)	396, 561, 604, 747, 1235, 1365, 1383, 1425, 1512
MbiI	CCGCTC	1 cut(s)	1810
MboI	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
MhlI	GDGCHC	1 cut(s)	1787
MlyI	GAGTC	1 cut(s)	228
MmeI	TCCRAC	1 cut(s)	1499
Mph1103I	ATGCAT	1 cut(s)	367
MroXI	GAANNNNTTC	2 cut(s)	677, 1288
MseI	TTAA	5 cut(s)	993, 1319, 1602, 1854, 2034
MslI	CAYNNNNRTG	4 cut(s)	41, 47, 1449, 1578
MspA1I	CMGCKG	3 cut(s)	743, 1817, 1922
MspI	CCGG	5 cut(s)	115, 190, 218, 300, 392
MspR9I	CCNGG	4 cut(s)	301, 1128, 1434, 1845
MvaI	CCWGG	3 cut(s)	1128, 1434, 1845
MvnI	CGCG	3 cut(s)	195, 239, 713
MwoI	GCNNNNNNNGC	5 cut(s)	96, 105, 541, 1295, 1447
NciI	CCSGG	1 cut(s)	301
NcoI	CCATGG	1 cut(s)	176
NdeI	CATATG	1 cut(s)	367
NdeII	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
NlaIV	GGNNCC	4 cut(s)	91, 1059, 1764, 2069
NmuCI	GTSAC	4 cut(s)	688, 938, 1176, 1874
NruI	TCGCGA	1 cut(s)	239
NsiI	ATGCAT	1 cut(s)	367
NspI	RCATGY	1 cut(s)	46
NspV	TTCGAA	1 cut(s)	509
PagI	TCATGA	2 cut(s)	1258, 1576
PasI	CCCWGGG	1 cut(s)	1844
PciI	ACATGT	1 cut(s)	42
PdmI	GAANNNNTTC	2 cut(s)	677, 1288
PfeI	GAWTC	4 cut(s)	635, 896, 2084, 2123
PfoI	TCCNGGA	1 cut(s)	299
PkrI	GCNGC	7 cut(s)	107, 573, 742, 844, 1678, 1750, 1972
PleI	GAGTC	1 cut(s)	228
PpsI	GAGTC	1 cut(s)	228
Ppu21I	YACGTR	1 cut(s)	1874
PscI	ACATGT	1 cut(s)	42
PshBI	ATTAAT	2 cut(s)	1602, 1854
PsiI	TTATAA	1 cut(s)	2111
Psp6I	CCWGG	3 cut(s)	1126, 1432, 1843
PspFI	CCCAGC	2 cut(s)	281, 1049
PspGI	CCWGG	3 cut(s)	1126, 1432, 1843
PspN4I	GGNNCC	4 cut(s)	91, 1059, 1764, 2069
PspPI	GGNCC	5 cut(s)	117, 173, 522, 1058, 1130
PstI	CTGCAG	1 cut(s)	1753
PstNI	CAGNNNCTG	2 cut(s)	842, 1196
PvuII	CAGCTG	3 cut(s)	743, 1817, 1922
RruI	TCGCGA	1 cut(s)	239
RsaI	GTAC	7 cut(s)	47, 86, 185, 801, 990, 1591, 2069
RsaNI	GTAC	7 cut(s)	46, 85, 184, 800, 989, 1590, 2068
RseI	CAYNNNNRTG	4 cut(s)	41, 47, 1449, 1578
Rsr2I	CGGWCCG	1 cut(s)	117
RsrII	CGGWCCG	1 cut(s)	117
SalI	GTCGAC	1 cut(s)	231
SaqAI	TTAA	5 cut(s)	993, 1319, 1602, 1854, 2034
SatI	GCNGC	7 cut(s)	106, 572, 741, 843, 1677, 1749, 1971
Sau3AI	GATC	9 cut(s)	394, 559, 602, 745, 1233, 1363, 1381, 1423, 1510
Sau96I	GGNCC	5 cut(s)	117, 173, 522, 1058, 1130
SchI	GAGTC	1 cut(s)	228
ScrFI	CCNGG	4 cut(s)	301, 1128, 1434, 1845
SduI	GDGCHC	1 cut(s)	1787
SfaNI	GCATC	8 cut(s)	817, 829, 1149, 1176, 1183, 1311, 1582, 1765
SfcI	CTRYAG	1 cut(s)	1749
SfuI	TTCGAA	1 cut(s)	509
SinI	GGWCC	4 cut(s)	117, 173, 1058, 1130
SmiMI	CAYNNNNRTG	4 cut(s)	41, 47, 1449, 1578
SmlI	CTYRAG	2 cut(s)	492, 803
SmoI	CTYRAG	2 cut(s)	492, 803
SsiI	CCGC	8 cut(s)	97, 103, 133, 497, 571, 711, 1554, 1808
SspI	AATATT	2 cut(s)	1252, 1897
SspMI	CTAG	1 cut(s)	2093
StyD4I	CCNGG	4 cut(s)	299, 1126, 1432, 1843
StyI	CCWWGG	3 cut(s)	176, 720, 814
TaaI	ACNGT	2 cut(s)	694, 2005
TaiI	ACGT	3 cut(s)	621, 1876, 1954
TaqI	TCGA	6 cut(s)	144, 232, 509, 605, 902, 1473
TatI	WGTACW	3 cut(s)	45, 183, 1589
TauI	GCSGC	1 cut(s)	574
TfiI	GAWTC	4 cut(s)	635, 896, 2084, 2123
Tru1I	TTAA	5 cut(s)	993, 1319, 1602, 1854, 2034
Tru9I	TTAA	5 cut(s)	993, 1319, 1602, 1854, 2034
TscAI	CASTG	4 cut(s)	782, 943, 1495, 2081
TseFI	GTSAC	4 cut(s)	688, 938, 1176, 1874
TseI	GCWGC	6 cut(s)	105, 740, 842, 1676, 1748, 1970
Tsp45I	GTSAC	4 cut(s)	688, 938, 1176, 1874
TspRI	CASTG	4 cut(s)	782, 943, 1495, 2081
VpaK11BI	GGWCC	4 cut(s)	117, 173, 1058, 1130
VspI	ATTAAT	2 cut(s)	1602, 1854
XapI	RAATTY	5 cut(s)	167, 466, 511, 676, 1119
XceI	RCATGY	1 cut(s)	46
XcmI	CCANNNNNNNNNTGG	1 cut(s)	34
XmiI	GTMKAC	1 cut(s)	232
XmnI	GAANNNNTTC	2 cut(s)	677, 1288
XspI	CTAG	1 cut(s)	2093
Zsp2I	ATGCAT	1 cut(s)	367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.