Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009469.1

Orthogroup ID

OG0004382

Physical Location & Seq

Genomic Coordinates Forward (+)

36919 .. 41515

Gene Structure 4597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009469.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

atgctccaccaggtaaaacccctccacccccatctccgccatctacggttggcccacttcaaggccccaaagcccccaaagccgccggaatcccctccgaagccgccaaaccctccccaaaagcccgaaaccttcaccctccacgaccacacgtggcaggacccctacagctggatgtccaagctcaacgacaaggtcgccatgcgacacatggacatgtacatggaacaggaagacaagtacaccgaagctgtcatgtacggcaccgaccgcctccagagcaagctccagtccgagatggcctcccgcttatccttcgacctctccactcctcccctcaaatttggaccatggttgtactaccggcgcgtggaggaaggtaagcagtttccggtgctgtgtcgtcgactcgcgagtttacacgacgagttcatttctcataagtcgccttctgctgggtttgattttacttccgggaagagaattgagcagaagctgattgattacaatcaagaagctcaaagatttggaggttatgcatatgaagaattatcggaagtttcgccggatcatcggtttattgcttatacaatgtatgataaagacaaggacttgtttaggttgtctgttaggaacttgaattctggtgcattgtgtagtaagcctcaagcggagcgtgtttcgaatttggcttgggccaaagacgggcaggcattgctttatgttgttaccgatcagaacaagcggccatataggatgtattgtagcatgattggatcgactgatgaggacgttttagtttttgaagaatcggataataatgtgtttgtcaacattagacacacgaaagatttccggtttgtgactgtaaataccttctctaccgcgtcttccaaggtctttttgataaatgcagctgatccattgtcggggttgaacttagtttggcagtgtgaaggtatagcgcattgcgtacttgagcatcaccaaggatatctttttctgtttacagatgctgccaaaggagggcagtcagttgataaccattatctccttcgtagtcctgtggattcttcgagcagtccaagaatatgggaggatgtattcgtcagtgacccagactgggtttttgaggatgtggatttcagtcatacacacttggtacttaatataagggaagggcgaaactttagactttgttctgttgctttacctttgcctgctgggaagggaccagttcatctaaaagagcttcacccacaattcttgcctcttccaaaatatgtttcgcaaatttcacctggaccaaattatgactaccattcatcaaagatgcgctttacaatatcatcacctgtgatgccagatgctgtggttgattatgacctgtcaaatggaaactggaagatcattcaacagcagaatattcttcatgaaagaacaaaggttttgtatggaacagcttcttcagcaagcatcagtgagaaaaccttaaatatagataatttgaattctgcaaatgaagtcagccctgatgatcagcagttgtggaatgatctttctgagttttatgcttgtgaacagcataatgtctcttcttatgatggagtcttggttccattgactgttgtatactctcgcaaaaacaagaaagaggatcagaaccctggattgcttcatgtgcatggagcttatggtgagctacttgataaaaggtggcgcagtgagttgaaaagccttcttgatcgtggttggatggttgcctatgctgatgttagaggtggaggcggtggaggtaagaagtggcatcatgatggaagatgtacaaagaagattaattccatcaaggattttatagcctgtgccaatttccttgttgacaaagaaattgtccatgaaaaaaagctcgctgcttcaggttatagtgctggaggacttgtagttgcttcagccatcaatcaatgcccacatttgtttactgctgcagttttgaagaaccctggattgcttcatgtgcatggagcttatggtgagctactcgataaaaggtggcgcagtgagttgaaaagccttcttgatcgtggttggatggttgcctatgctgatgttagaggtggaggcggtggaggtaagaagtggcatcatgatggaagatgtacaaagaagattaattccgtcaaggattttatagcctgtgccaatttccttgttgacaaagaaattgtccatgaaaaaaagctcgctgcttcaggttatagtgctggaggacttgtagttgcttcagccatcaatcaatgcccacatttgtttactgctgcagttttgaaggttccatttttagatgcaacgagcactcttctctatcccattataccgctcacagctgttgactatgaagagtttggataccctggggacattaatgattttcatgctatacgtgactattctccatatgacaatattcagaaggatgttctctatccagctgtattgatatcctcgtctttcaatacacgttttggagcgtgggaagctgcaaaatgggttgcacgagttcgtgaacttacagtttacgacccaaagcgtccaatactgcttaatttgacaacagacatagtagaggaaaacaggtacctccagtgcaaggaatcggcactggagactgcatttcttataaaggcaatggaatggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0044424 GO:0044464 GO:0070011 GO:0070012 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

898

Amino Acids

101.68

Weight (kDa)

6.85

Isoelectric Point (pI)

45.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66960
fragaria_vesca	FvH4_1g14740 FvH4_1g14740 FvH4_1g14740 FvH4_1g14740 FvH4_1g14740
malus_domestica	MD15G1274800.v1.1
prunus_persica	Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1 Prupe.7G143000_v2.0.a1
pyrus_communis	pycom15g23790
rosa_chinensis	RchiOBHm_Chr1g0319111 RchiOBHm_Chr2g0103681
rosa_laevigata	RLG00000017248 RLG00000029580 RLG00000030483
rosa_multiflora	Rmu_sc0001852.1_g000011 Rmu_sc0003574.1_g000010 Rmu_sc0009469.1_g000007
rosa_roxburghii	Rroxscaffold_2G00139490 Rroxscaffold_4G00328470
rosa_rugosa	Rorug05G0248700
rosa_samantha	Rh1AG038700 Rh2AG165200 Rh2BG172400 Rh2CG171300 Rh2DG170800 Rh5CG361300
rosa_wichuraiana	Rw1G003040 Rw2G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2678
Acc65I	GGTACC	1 cut(s)	2634
AccB1I	GGYRCC	2 cut(s)	263, 2634
AccBSI	CCGCTC	1 cut(s)	2377
AccI	GTMKAC	2 cut(s)	406, 1632
AccII	CGCG	3 cut(s)	369, 413, 887
AclWI	GGATC	4 cut(s)	576, 784, 914, 1665
AcoI	YGGCCR	1 cut(s)	746
AcsI	RAATTY	5 cut(s)	341, 640, 685, 1293, 1510
AcuI	CTGAAG	5 cut(s)	1452, 1899, 1932, 2232, 2265
AcvI	CACGTG	1 cut(s)	153
AfaI	GTAC	9 cut(s)	221, 242, 260, 359, 975, 1164, 1825, 2158, 2636
AfiI	CCNNNNNNNGG	9 cut(s)	61, 171, 370, 455, 705, 929, 1026, 1123, 2647
AflIII	ACRYGT	3 cut(s)	150, 216, 2516
AjnI	CCWGG	5 cut(s)	9, 1300, 1666, 1999, 2410
AjuI	GAANNNNNNNTTGG	2 cut(s)	1270, 1302
AloI	GAACNNNNNNTCC	2 cut(s)	1599, 1631
Alw21I	GWGCWC	1 cut(s)	2354
Alw26I	GTCTC	2 cut(s)	1597, 2657
AlwI	GGATC	4 cut(s)	576, 784, 914, 1665
AlwNI	CAGNNNCTG	3 cut(s)	496, 1016, 1370
AoxI	GGCC	5 cut(s)	51, 63, 300, 696, 746
ApeKI	GCWGC	7 cut(s)	914, 1016, 1910, 1982, 2243, 2315, 2537
ApoI	RAATTY	5 cut(s)	341, 640, 685, 1293, 1510
ArsI	GACNNNNNNTTYG	6 cut(s)	1112, 1144, 1875, 1907, 2208, 2240
AseI	ATTAAT	3 cut(s)	1836, 2169, 2421
Asp700I	GAANNNNTTC	2 cut(s)	851, 1462
Asp718I	GGTACC	1 cut(s)	2634
AspLEI	GCGC	5 cut(s)	369, 967, 1338, 1722, 2055
AspS9I	GGNCC	7 cut(s)	52, 64, 160, 347, 696, 1232, 1304
AsuC2I	CCSGG	1 cut(s)	475
AsuHPI	GGTGA	7 cut(s)	127, 977, 1247, 1290, 1344, 1709, 2042
AsuII	TTCGAA	1 cut(s)	683
AvaII	GGWCC	4 cut(s)	160, 347, 1232, 1304
BanI	GGYRCC	2 cut(s)	263, 2634
BauI	CACGAG	1 cut(s)	2553
BbrPI	CACGTG	1 cut(s)	153
BbsI	GAAGAC	2 cut(s)	240, 882
Bbv12I	GWGCWC	1 cut(s)	2354
BbvI	GCAGC	7 cut(s)	926, 1003, 1897, 1969, 2230, 2302, 2524
BceAI	ACGGC	1 cut(s)	277
BciT130I	CCWGG	5 cut(s)	11, 1302, 1668, 2001, 2412
BciVI	GTATCC	1 cut(s)	2399
BclI	TGATCA	1 cut(s)	1537
BcnI	CCSGG	1 cut(s)	475
BcoDI	GTCTC	2 cut(s)	1597, 2657
BfmI	CTRYAG	3 cut(s)	166, 1983, 2316
BfuI	GTATCC	1 cut(s)	2399
Bme1390I	CCNGG	6 cut(s)	11, 475, 1302, 1668, 2001, 2412
Bme18I	GGWCC	4 cut(s)	160, 347, 1232, 1304
BmgT120I	GGNCC	7 cut(s)	52, 64, 160, 347, 696, 1232, 1304
BmiI	GGNNCC	7 cut(s)	66, 162, 265, 1233, 1617, 2331, 2636
BmrFI	CCNGG	6 cut(s)	11, 475, 1302, 1668, 2001, 2412
BmrI	ACTGGG	1 cut(s)	1132
BmsI	GCATC	9 cut(s)	991, 1003, 1323, 1350, 1357, 1485, 1816, 2149, 2332
BmuI	ACTGGG	1 cut(s)	1132
BpiI	GAAGAC	2 cut(s)	240, 882
BplI	GAGNNNNNCTC	2 cut(s)	287, 319
BpmI	CTGGAG	6 cut(s)	260, 272, 1950, 2283, 2624, 2681
Bpu14I	TTCGAA	1 cut(s)	683
BpuEI	CTTGAG	2 cut(s)	651, 998
BpuMI	CCSGG	1 cut(s)	475
BsaAI	YACGTR	2 cut(s)	153, 2441
BsaBI	GATNNNNATC	1 cut(s)	507
BsaJI	CCNNGG	7 cut(s)	350, 894, 988, 1666, 1999, 2410, 2411
BsaWI	WCCGGW	2 cut(s)	391, 855
BsaXI	ACNNNNNCTCC	6 cut(s)	1599, 1629, 1923, 1953, 2256, 2286
Bsc4I	CCNNNNNNNGG	9 cut(s)	61, 171, 370, 455, 705, 929, 1026, 1123, 2647
Bse118I	RCCGGY	1 cut(s)	363
Bse1I	ACTGG	6 cut(s)	289, 1127, 1235, 1406, 2641, 2664
Bse3DI	GCAATG	3 cut(s)	713, 967, 2691
Bse8I	GATNNNNATC	1 cut(s)	507
BseBI	CCWGG	5 cut(s)	11, 1302, 1668, 2001, 2412
BseDI	CCNNGG	7 cut(s)	350, 894, 988, 1666, 1999, 2410, 2411
BseGI	GGATG	7 cut(s)	180, 762, 1105, 1141, 1761, 2094, 2479
BseJI	GATNNNNATC	1 cut(s)	507
BseLI	CCNNNNNNNGG	9 cut(s)	61, 171, 370, 455, 705, 929, 1026, 1123, 2647
BseMI	GCAATG	3 cut(s)	713, 967, 2691
BseMII	CTCAG	1 cut(s)	1554
BseNI	ACTGG	6 cut(s)	289, 1127, 1235, 1406, 2641, 2664
BseRI	GAGGAG	1 cut(s)	321
BseXI	GCAGC	7 cut(s)	926, 1003, 1897, 1969, 2230, 2302, 2524
BseYI	CCCAGC	2 cut(s)	455, 1223
Bsh1236I	CGCG	3 cut(s)	369, 413, 887
Bsh1285I	CGRYCG	1 cut(s)	271
BshFI	GGCC	5 cut(s)	53, 65, 302, 698, 748
BshNI	GGYRCC	2 cut(s)	263, 2634
BsiEI	CGRYCG	1 cut(s)	271
BsiHKAI	GWGCWC	1 cut(s)	2354
BsiSI	CCGG	6 cut(s)	86, 364, 392, 474, 566, 856
BslFI	GGGAC	2 cut(s)	1245, 2429
BslI	CCNNNNNNNGG	9 cut(s)	61, 171, 370, 455, 705, 929, 1026, 1123, 2647
BsmAI	GTCTC	2 cut(s)	1597, 2657
BsmFI	GGGAC	2 cut(s)	1245, 2429
BsnI	GGCC	5 cut(s)	53, 65, 302, 698, 748
Bsp119I	TTCGAA	1 cut(s)	683
Bsp1286I	GDGCHC	1 cut(s)	2354
Bsp1407I	TGTACA	3 cut(s)	219, 1823, 2156
Bsp19I	CCATGG	1 cut(s)	350
Bsp68I	TCGCGA	1 cut(s)	413
BspANI	GGCC	5 cut(s)	53, 65, 302, 698, 748
BspCNI	CTCAG	1 cut(s)	1555
BspFNI	CGCG	3 cut(s)	369, 413, 887
BspHI	TCATGA	3 cut(s)	1432, 1810, 2143
BspLI	GGNNCC	7 cut(s)	66, 162, 265, 1233, 1617, 2331, 2636
BspMAI	CTGCAG	2 cut(s)	1987, 2320
BspPI	GGATC	4 cut(s)	576, 784, 914, 1665
BspT104I	TTCGAA	1 cut(s)	683
BspT107I	GGYRCC	2 cut(s)	263, 2634
BsrBI	CCGCTC	1 cut(s)	2377
BsrDI	GCAATG	3 cut(s)	713, 967, 2691
BsrFI	RCCGGY	1 cut(s)	363
BsrGI	TGTACA	3 cut(s)	219, 1823, 2156
BsrI	ACTGG	6 cut(s)	289, 1127, 1235, 1406, 2641, 2664
BssAI	RCCGGY	1 cut(s)	363
BssECI	CCNNGG	7 cut(s)	350, 894, 988, 1666, 1999, 2410, 2411
BssNAI	GTATAC	1 cut(s)	1633
BssSI	CACGAG	1 cut(s)	2553
BssT1I	CCWWGG	3 cut(s)	350, 894, 988
Bst1107I	GTATAC	1 cut(s)	1633
Bst2BI	CACGAG	1 cut(s)	2553
Bst2UI	CCWGG	5 cut(s)	11, 1302, 1668, 2001, 2412
Bst4CI	ACNGT	4 cut(s)	48, 868, 1627, 2572
Bst6I	CTCTTC	5 cut(s)	473, 1278, 1600, 2361, 2391
BstAPI	GCANNNNNTGC	1 cut(s)	715
BstAUI	TGTACA	3 cut(s)	219, 1823, 2156
BstBAI	YACGTR	2 cut(s)	153, 2441
BstBI	TTCGAA	1 cut(s)	683
BstC8I	GCNNGC	6 cut(s)	284, 711, 1221, 1474, 1908, 2241
BstDEI	CTNAG	2 cut(s)	940, 1563
BstDSI	CCRYGG	1 cut(s)	350
BstF5I	GGATG	7 cut(s)	180, 762, 1105, 1141, 1761, 2094, 2479
BstFNI	CGCG	3 cut(s)	369, 413, 887
BstHHI	GCGC	5 cut(s)	369, 967, 1338, 1722, 2055
BstMAI	GTCTC	2 cut(s)	1597, 2657
BstMCI	CGRYCG	1 cut(s)	271
BstMWI	GCNNNNNNNGC	8 cut(s)	79, 270, 279, 715, 1469, 1681, 2014, 2534
BstNI	CCWGG	5 cut(s)	11, 1302, 1668, 2001, 2412
BstNSI	RCATGY	1 cut(s)	220
BstSCI	CCNGG	6 cut(s)	9, 473, 1300, 1666, 1999, 2410
BstSFI	CTRYAG	3 cut(s)	166, 1983, 2316
BstUI	CGCG	3 cut(s)	369, 413, 887
BstV1I	GCAGC	7 cut(s)	926, 1003, 1897, 1969, 2230, 2302, 2524
BstV2I	GAAGAC	2 cut(s)	240, 882
BstXI	CCANNNNNNTGG	1 cut(s)	1092
BstZ17I	GTATAC	1 cut(s)	1633
BsuI	GTATCC	1 cut(s)	2399
BsuRI	GGCC	5 cut(s)	53, 65, 302, 698, 748
BtgI	CCRYGG	1 cut(s)	350
BtsCI	GGATG	7 cut(s)	180, 762, 1105, 1141, 1761, 2094, 2479
BtsI	GCAGTG	3 cut(s)	956, 1729, 2062
BtsIMutI	CAGTG	7 cut(s)	956, 1117, 1486, 1729, 2062, 2648, 2657
BtuMI	TCGCGA	1 cut(s)	413
Cac8I	GCNNGC	6 cut(s)	284, 711, 1221, 1474, 1908, 2241
CaiI	CAGNNNCTG	3 cut(s)	496, 1016, 1370
CciI	TCATGA	3 cut(s)	1432, 1810, 2143
CfoI	GCGC	5 cut(s)	369, 967, 1338, 1722, 2055
Cfr10I	RCCGGY	1 cut(s)	363
Cfr13I	GGNCC	7 cut(s)	52, 64, 160, 347, 696, 1232, 1304
CseI	GACGC	2 cut(s)	876, 2576
CsiI	ACCWGGT	1 cut(s)	9
Csp6I	GTAC	9 cut(s)	220, 241, 259, 358, 974, 1163, 1824, 2157, 2635
CspCI	CAANNNNNGTGG	2 cut(s)	1248, 1283
CviQI	GTAC	9 cut(s)	220, 241, 259, 358, 974, 1163, 1824, 2157, 2635
DdeI	CTNAG	2 cut(s)	940, 1563
EaeI	YGGCCR	1 cut(s)	746
Eam1104I	CTCTTC	5 cut(s)	473, 1278, 1600, 2361, 2391
EarI	CTCTTC	5 cut(s)	473, 1278, 1600, 2361, 2391
EciI	GGCGGA	1 cut(s)	26
Eco130I	CCWWGG	3 cut(s)	350, 894, 988
Eco32I	GATATC	2 cut(s)	995, 2499
Eco47I	GGWCC	4 cut(s)	160, 347, 1232, 1304
Eco57I	CTGAAG	5 cut(s)	1452, 1899, 1932, 2232, 2265
Eco72I	CACGTG	1 cut(s)	153
EcoO109I	RGGNCCY	2 cut(s)	64, 160
EcoRI	GAATTC	2 cut(s)	640, 1510
EcoRII	CCWGG	5 cut(s)	9, 1300, 1666, 1999, 2410
EcoRV	GATATC	2 cut(s)	995, 2499
EcoT14I	CCWWGG	3 cut(s)	350, 894, 988
EcoT22I	ATGCAT	1 cut(s)	541
ErhI	CCWWGG	3 cut(s)	350, 894, 988
FalI	AAGNNNNNCTT	4 cut(s)	981, 1013, 1322, 1354
FaqI	GGGAC	2 cut(s)	1245, 2429
FauI	CCCGC	1 cut(s)	314
FauNDI	CATATG	2 cut(s)	541, 2455
FbaI	TGATCA	1 cut(s)	1537
FblI	GTMKAC	2 cut(s)	406, 1632
FokI	GGATG	7 cut(s)	187, 769, 1112, 1148, 1768, 2101, 2486
GlaI	GCGC	5 cut(s)	368, 966, 1337, 1721, 2054
GsaI	CCCAGC	2 cut(s)	459, 1227
GsuI	CTGGAG	6 cut(s)	260, 272, 1950, 2283, 2624, 2681
HaeIII	GGCC	5 cut(s)	53, 65, 302, 698, 748
HapII	CCGG	6 cut(s)	86, 364, 392, 474, 566, 856
HgaI	GACGC	2 cut(s)	876, 2576
HhaI	GCGC	5 cut(s)	369, 967, 1338, 1722, 2055
Hin6I	GCGC	5 cut(s)	367, 965, 1336, 1720, 2053
HinP1I	GCGC	5 cut(s)	367, 965, 1336, 1720, 2053
HincII	GTYRAC	5 cut(s)	407, 832, 1879, 2212, 2389
HindII	GTYRAC	5 cut(s)	407, 832, 1879, 2212, 2389
HinfI	GANTC	6 cut(s)	89, 408, 809, 1070, 1608, 2651
HpaII	CCGG	6 cut(s)	86, 364, 392, 474, 566, 856
HphI	GGTGA	7 cut(s)	127, 977, 1247, 1290, 1344, 1709, 2042
Hpy188I	TCNGA	8 cut(s)	99, 295, 556, 738, 814, 1564, 1662, 2469
Hpy188III	TCNNGA	9 cut(s)	277, 412, 512, 1433, 1742, 1811, 2075, 2144, 2561
Hpy99I	CGWCG	2 cut(s)	408, 428
HpyCH4III	ACNGT	4 cut(s)	48, 868, 1627, 2572
HpyCH4IV	ACGT	4 cut(s)	152, 792, 2440, 2518
HpyF10VI	GCNNNNNNNGC	8 cut(s)	79, 270, 279, 715, 1469, 1681, 2014, 2534
HpyF3I	CTNAG	2 cut(s)	940, 1563
HpySE526I	ACGT	4 cut(s)	152, 792, 2440, 2518
HspAI	GCGC	5 cut(s)	367, 965, 1336, 1720, 2053
KpnI	GGTACC	1 cut(s)	2638
Ksp22I	TGATCA	1 cut(s)	1537
LmnI	GCTCC	6 cut(s)	9, 291, 673, 1688, 2021, 2525
Lsp1109I	GCAGC	7 cut(s)	926, 1003, 1897, 1969, 2230, 2302, 2524
LweI	GCATC	9 cut(s)	991, 1003, 1323, 1350, 1357, 1485, 1816, 2149, 2332
MabI	ACCWGGT	1 cut(s)	9
MaeII	ACGT	4 cut(s)	152, 792, 2440, 2518
MaeIII	GTNAC	4 cut(s)	727, 862, 1112, 2441
MbiI	CCGCTC	1 cut(s)	2377
MhlI	GDGCHC	1 cut(s)	2354
MlyI	GAGTC	2 cut(s)	402, 1617
MmeI	TCCRAC	2 cut(s)	1733, 2066
Mph1103I	ATGCAT	1 cut(s)	541
MroXI	GAANNNNTTC	2 cut(s)	851, 1462
MseI	TTAA	6 cut(s)	1167, 1493, 1836, 2169, 2421, 2601
MslI	CAYNNNNRTG	6 cut(s)	215, 221, 1683, 1812, 2016, 2145
MspA1I	CMGCKG	4 cut(s)	171, 917, 2384, 2489
MspI	CCGG	6 cut(s)	86, 364, 392, 474, 566, 856
MspR9I	CCNGG	6 cut(s)	11, 475, 1302, 1668, 2001, 2412
MvaI	CCWGG	5 cut(s)	11, 1302, 1668, 2001, 2412
MvnI	CGCG	3 cut(s)	369, 413, 887
MwoI	GCNNNNNNNGC	8 cut(s)	79, 270, 279, 715, 1469, 1681, 2014, 2534
NciI	CCSGG	1 cut(s)	475
NcoI	CCATGG	1 cut(s)	350
NdeI	CATATG	2 cut(s)	541, 2455
NlaIV	GGNNCC	7 cut(s)	66, 162, 265, 1233, 1617, 2331, 2636
NmuCI	GTSAC	3 cut(s)	862, 1112, 2441
NruI	TCGCGA	1 cut(s)	413
NsiI	ATGCAT	1 cut(s)	541
NspI	RCATGY	1 cut(s)	220
NspV	TTCGAA	1 cut(s)	683
PagI	TCATGA	3 cut(s)	1432, 1810, 2143
PasI	CCCWGGG	1 cut(s)	2411
PciI	ACATGT	1 cut(s)	216
PdmI	GAANNNNTTC	2 cut(s)	851, 1462
PfeI	GAWTC	4 cut(s)	89, 809, 1070, 2651
PflFI	GACNNNGTC	1 cut(s)	194
PfoI	TCCNGGA	1 cut(s)	473
PleI	GAGTC	2 cut(s)	402, 1616
PmaCI	CACGTG	1 cut(s)	153
PmlI	CACGTG	1 cut(s)	153
PpsI	GAGTC	2 cut(s)	402, 1616
Ppu21I	YACGTR	2 cut(s)	153, 2441
PpuMI	RGGWCCY	1 cut(s)	160
PscI	ACATGT	1 cut(s)	216
PshBI	ATTAAT	3 cut(s)	1836, 2169, 2421
PsiI	TTATAA	1 cut(s)	2678
Psp5II	RGGWCCY	1 cut(s)	160
Psp6I	CCWGG	5 cut(s)	9, 1300, 1666, 1999, 2410
PspCI	CACGTG	1 cut(s)	153
PspFI	CCCAGC	2 cut(s)	455, 1223
PspGI	CCWGG	5 cut(s)	9, 1300, 1666, 1999, 2410
PspN4I	GGNNCC	7 cut(s)	66, 162, 265, 1233, 1617, 2331, 2636
PspPI	GGNCC	7 cut(s)	52, 64, 160, 347, 696, 1232, 1304
PspPPI	RGGWCCY	1 cut(s)	160
PstI	CTGCAG	2 cut(s)	1987, 2320
PstNI	CAGNNNCTG	3 cut(s)	496, 1016, 1370
PsyI	GACNNNGTC	1 cut(s)	194
PvuII	CAGCTG	4 cut(s)	171, 917, 2384, 2489
RruI	TCGCGA	1 cut(s)	413
RsaI	GTAC	9 cut(s)	221, 242, 260, 359, 975, 1164, 1825, 2158, 2636
RsaNI	GTAC	9 cut(s)	220, 241, 259, 358, 974, 1163, 1824, 2157, 2635
RseI	CAYNNNNRTG	6 cut(s)	215, 221, 1683, 1812, 2016, 2145
SalI	GTCGAC	1 cut(s)	405
SaqAI	TTAA	6 cut(s)	1167, 1493, 1836, 2169, 2421, 2601
Sau96I	GGNCC	7 cut(s)	52, 64, 160, 347, 696, 1232, 1304
SchI	GAGTC	2 cut(s)	402, 1617
ScrFI	CCNGG	6 cut(s)	11, 475, 1302, 1668, 2001, 2412
SduI	GDGCHC	1 cut(s)	2354
SexAI	ACCWGGT	1 cut(s)	9
SfaNI	GCATC	9 cut(s)	991, 1003, 1323, 1350, 1357, 1485, 1816, 2149, 2332
SfcI	CTRYAG	3 cut(s)	166, 1983, 2316
SfuI	TTCGAA	1 cut(s)	683
SinI	GGWCC	4 cut(s)	160, 347, 1232, 1304
SmiMI	CAYNNNNRTG	6 cut(s)	215, 221, 1683, 1812, 2016, 2145
SmlI	CTYRAG	2 cut(s)	666, 977
SmoI	CTYRAG	2 cut(s)	666, 977
SspI	AATATT	2 cut(s)	1426, 2464
StyD4I	CCNGG	6 cut(s)	9, 473, 1300, 1666, 1999, 2410
StyI	CCWWGG	3 cut(s)	350, 894, 988
TaaI	ACNGT	4 cut(s)	48, 868, 1627, 2572
TaiI	ACGT	4 cut(s)	155, 795, 2443, 2521
TaqI	TCGA	6 cut(s)	318, 406, 683, 779, 1076, 2040
TatI	WGTACW	5 cut(s)	219, 240, 357, 1823, 2156
TauI	GCSGC	3 cut(s)	85, 106, 748
TfiI	GAWTC	4 cut(s)	89, 809, 1070, 2651
Tru1I	TTAA	6 cut(s)	1167, 1493, 1836, 2169, 2421, 2601
Tru9I	TTAA	6 cut(s)	1167, 1493, 1836, 2169, 2421, 2601
TscAI	CASTG	7 cut(s)	956, 1117, 1486, 1729, 2062, 2648, 2664
TseFI	GTSAC	3 cut(s)	862, 1112, 2441
TseI	GCWGC	7 cut(s)	914, 1016, 1910, 1982, 2243, 2315, 2537
Tsp45I	GTSAC	3 cut(s)	862, 1112, 2441
TspGWI	ACGGA	1 cut(s)	2164
TspRI	CASTG	7 cut(s)	956, 1117, 1486, 1729, 2062, 2648, 2664
Tth111I	GACNNNGTC	1 cut(s)	194
VpaK11BI	GGWCC	4 cut(s)	160, 347, 1232, 1304
VspI	ATTAAT	3 cut(s)	1836, 2169, 2421
XapI	RAATTY	5 cut(s)	341, 640, 685, 1293, 1510
XceI	RCATGY	1 cut(s)	220
XcmI	CCANNNNNNNNNTGG	1 cut(s)	208
XmiI	GTMKAC	2 cut(s)	406, 1632
XmnI	GAANNNNTTC	2 cut(s)	851, 1462
Zsp2I	ATGCAT	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.