Domain of unknown function (DUF3527)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04490 AT1G04490 AT1G04490 AT1G04490 AT1G04490 AT1G04490 AT1G04490 AT1G04490 AT1G04490 AT2G33360 AT2G33360 |
| fragaria_vesca | FvH4_4g04490 FvH4_4g04490 FvH4_4g04490 FvH4_4g04490 |
| malus_domestica | MD13G1220400.v1.1 MD16G1225600.v1.1 |
| prunus_persica | Prupe.1G047300_v2.0.a1 |
| pyrus_communis | pycom13g19500 pycom16g18870 |
| rosa_chinensis | RchiOBHm_Chr4g0395271 |
| rosa_laevigata | RLG00000009638 |
| rosa_multiflora | Rmu_sc0003703.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00340140 |
| rosa_rugosa | Rorug03G0358600.1 |
| rosa_samantha | Rh4AG057800 Rh4BG056500 Rh4CG062600 Rh4DG053400 |
| rosa_wichuraiana | Rw4G004650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 17 |
| Acc16I | TGCGCA | 1 cut(s) | 202 |
| Acc36I | ACCTGC | 1 cut(s) | 1514 |
| AccB1I | GGYRCC | 1 cut(s) | 1626 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 909 |
| AccII | CGCG | 1 cut(s) | 999 |
| AciI | CCGC | 2 cut(s) | 395, 1521 |
| AcoI | YGGCCR | 1 cut(s) | 976 |
| AcsI | RAATTY | 8 cut(s) | 278, 349, 696, 1237, 1300, 1327, 1406, 1717 |
| AcuI | CTGAAG | 1 cut(s) | 1433 |
| AcvI | CACGTG | 1 cut(s) | 840 |
| AfaI | GTAC | 5 cut(s) | 97, 226, 511, 1641, 1879 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 394, 581, 707, 909, 1752 |
| AflIII | ACRYGT | 2 cut(s) | 419, 758 |
| AjnI | CCWGG | 2 cut(s) | 655, 1899 |
| AluBI | AGCT | 8 cut(s) | 329, 344, 357, 380, 461, 803, 1229, 1340 |
| AluI | AGCT | 8 cut(s) | 329, 344, 357, 380, 461, 803, 1229, 1340 |
| Alw21I | GWGCWC | 3 cut(s) | 359, 839, 1231 |
| Alw26I | GTCTC | 4 cut(s) | 942, 1051, 1073, 1679 |
| Alw44I | GTGCAC | 1 cut(s) | 835 |
| AoxI | GGCC | 4 cut(s) | 571, 976, 1558, 1868 |
| ApaLI | GTGCAC | 1 cut(s) | 835 |
| ApeKI | GCWGC | 3 cut(s) | 326, 800, 1340 |
| ApoI | RAATTY | 8 cut(s) | 278, 349, 696, 1237, 1300, 1327, 1406, 1717 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 279, 303, 607 |
| AspLEI | GCGC | 1 cut(s) | 203 |
| AspS9I | GGNCC | 4 cut(s) | 572, 1538, 1559, 1869 |
| AsuC2I | CCSGG | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 7 cut(s) | 410, 554, 669, 1045, 1112, 1438, 1499 |
| AvaII | GGWCC | 1 cut(s) | 1538 |
| BaeGI | GKGCMC | 2 cut(s) | 839, 1631 |
| BalI | TGGCCA | 1 cut(s) | 978 |
| BanI | GGYRCC | 1 cut(s) | 1626 |
| BanII | GRGCYC | 4 cut(s) | 359, 554, 1231, 1730 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 400, 432 |
| BbrPI | CACGTG | 1 cut(s) | 840 |
| BbsI | GAAGAC | 2 cut(s) | 689, 1520 |
| Bbv12I | GWGCWC | 3 cut(s) | 359, 839, 1231 |
| BbvI | GCAGC | 3 cut(s) | 338, 812, 1327 |
| BccI | CCATC | 9 cut(s) | 361, 725, 784, 1097, 1159, 1217, 1368, 1575, 1766 |
| BceAI | ACGGC | 2 cut(s) | 270, 1690 |
| BciT130I | CCWGG | 2 cut(s) | 657, 1901 |
| BciVI | GTATCC | 2 cut(s) | 43, 1589 |
| BclI | TGATCA | 2 cut(s) | 7, 784 |
| BcnI | CCSGG | 1 cut(s) | 38 |
| BcoDI | GTCTC | 4 cut(s) | 942, 1051, 1073, 1679 |
| BfaI | CTAG | 5 cut(s) | 597, 1016, 1125, 1259, 1289 |
| BfmI | CTRYAG | 2 cut(s) | 489, 873 |
| BfuAI | ACCTGC | 1 cut(s) | 1514 |
| BfuI | GTATCC | 2 cut(s) | 43, 1589 |
| BglII | AGATCT | 1 cut(s) | 1586 |
| BisI | GCNGC | 3 cut(s) | 327, 801, 1341 |
| BlsI | GCNGC | 3 cut(s) | 328, 802, 1342 |
| BmcAI | AGTACT | 2 cut(s) | 226, 1641 |
| Bme1390I | CCNGG | 3 cut(s) | 38, 657, 1901 |
| Bme18I | GGWCC | 1 cut(s) | 1538 |
| BmgT120I | GGNCC | 4 cut(s) | 572, 1538, 1559, 1869 |
| BmiI | GGNNCC | 2 cut(s) | 574, 1628 |
| BmrFI | CCNGG | 3 cut(s) | 38, 657, 1901 |
| BmsI | GCATC | 5 cut(s) | 281, 326, 1104, 1273, 1746 |
| BpiI | GAAGAC | 2 cut(s) | 689, 1520 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1213, 1245 |
| BpmI | CTGGAG | 3 cut(s) | 483, 815, 1410 |
| BpuEI | CTTGAG | 3 cut(s) | 1121, 1253, 1674 |
| BpuMI | CCSGG | 1 cut(s) | 38 |
| BsaAI | YACGTR | 2 cut(s) | 759, 840 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1585 |
| BsaI | GGTCTC | 1 cut(s) | 1051 |
| BsaJI | CCNNGG | 3 cut(s) | 37, 820, 1900 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1070, 1100, 1576, 1606, 1840, 1870 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 394, 581, 707, 909, 1752 |
| Bse1I | ACTGG | 3 cut(s) | 701, 832, 1393 |
| Bse3DI | GCAATG | 1 cut(s) | 592 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1585 |
| BseBI | CCWGG | 2 cut(s) | 657, 1901 |
| BseDI | CCNNGG | 3 cut(s) | 37, 820, 1900 |
| BseGI | GGATG | 4 cut(s) | 10, 317, 1513, 1761 |
| BseJI | GATNNNNATC | 1 cut(s) | 1585 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 394, 581, 707, 909, 1752 |
| BseMI | GCAATG | 1 cut(s) | 592 |
| BseMII | CTCAG | 5 cut(s) | 38, 254, 1074, 1691, 1722 |
| BseNI | ACTGG | 3 cut(s) | 701, 832, 1393 |
| BseSI | GKGCMC | 2 cut(s) | 839, 1631 |
| BseXI | GCAGC | 3 cut(s) | 338, 812, 1327 |
| BseYI | CCCAGC | 1 cut(s) | 1614 |
| BsgI | GTGCAG | 1 cut(s) | 819 |
| Bsh1236I | CGCG | 1 cut(s) | 999 |
| BshFI | GGCC | 4 cut(s) | 573, 978, 1560, 1870 |
| BshNI | GGYRCC | 1 cut(s) | 1626 |
| BsiHKAI | GWGCWC | 3 cut(s) | 359, 839, 1231 |
| BsiSI | CCGG | 2 cut(s) | 37, 1867 |
| BslFI | GGGAC | 1 cut(s) | 1631 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 394, 581, 707, 909, 1752 |
| BsmAI | GTCTC | 4 cut(s) | 942, 1051, 1073, 1679 |
| BsmFI | GGGAC | 1 cut(s) | 1631 |
| BsmI | GAATGC | 2 cut(s) | 452, 831 |
| BsnI | GGCC | 4 cut(s) | 573, 978, 1560, 1870 |
| Bso31I | GGTCTC | 1 cut(s) | 1051 |
| Bsp1286I | GDGCHC | 6 cut(s) | 359, 554, 839, 1231, 1631, 1730 |
| Bsp1407I | TGTACA | 1 cut(s) | 1877 |
| Bsp143I | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| Bsp68I | TCGCGA | 1 cut(s) | 999 |
| BspACI | CCGC | 2 cut(s) | 395, 1521 |
| BspANI | GGCC | 4 cut(s) | 573, 978, 1560, 1870 |
| BspCNI | CTCAG | 5 cut(s) | 37, 255, 1075, 1690, 1723 |
| BspFNI | CGCG | 1 cut(s) | 999 |
| BspLI | GGNNCC | 2 cut(s) | 574, 1628 |
| BspMAI | CTGCAG | 1 cut(s) | 493 |
| BspMI | ACCTGC | 1 cut(s) | 1514 |
| BspQI | GCTCTTC | 1 cut(s) | 542 |
| BspT107I | GGYRCC | 1 cut(s) | 1626 |
| BspTNI | GGTCTC | 1 cut(s) | 1051 |
| BsrDI | GCAATG | 1 cut(s) | 592 |
| BsrGI | TGTACA | 1 cut(s) | 1877 |
| BsrI | ACTGG | 3 cut(s) | 701, 832, 1393 |
| BssECI | CCNNGG | 3 cut(s) | 37, 820, 1900 |
| BssMI | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| BssT1I | CCWWGG | 1 cut(s) | 820 |
| Bst2UI | CCWGG | 2 cut(s) | 657, 1901 |
| Bst4CI | ACNGT | 7 cut(s) | 229, 498, 514, 814, 1601, 1607, 1639 |
| Bst6I | CTCTTC | 4 cut(s) | 119, 542, 679, 1136 |
| BstAUI | TGTACA | 1 cut(s) | 1877 |
| BstBAI | YACGTR | 2 cut(s) | 759, 840 |
| BstC8I | GCNNGC | 3 cut(s) | 1273, 1703, 1737 |
| BstDEI | CTNAG | 6 cut(s) | 24, 263, 389, 1083, 1677, 1731 |
| BstF5I | GGATG | 4 cut(s) | 10, 317, 1513, 1761 |
| BstFNI | CGCG | 1 cut(s) | 999 |
| BstHHI | GCGC | 1 cut(s) | 203 |
| BstKTI | GATC | 6 cut(s) | 10, 34, 787, 1074, 1375, 1589 |
| BstMAI | GTCTC | 4 cut(s) | 942, 1051, 1073, 1679 |
| BstMBI | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 291, 323, 806, 1656 |
| BstNI | CCWGG | 2 cut(s) | 657, 1901 |
| BstNSI | RCATGY | 2 cut(s) | 423, 1739 |
| BstSCI | CCNGG | 3 cut(s) | 36, 655, 1899 |
| BstSFI | CTRYAG | 2 cut(s) | 489, 873 |
| BstSLI | GKGCMC | 2 cut(s) | 839, 1631 |
| BstUI | CGCG | 1 cut(s) | 999 |
| BstV1I | GCAGC | 3 cut(s) | 338, 812, 1327 |
| BstV2I | GAAGAC | 2 cut(s) | 689, 1520 |
| BstX2I | RGATCY | 1 cut(s) | 1586 |
| BstYI | RGATCY | 1 cut(s) | 1586 |
| BsuI | GTATCC | 2 cut(s) | 43, 1589 |
| BsuRI | GGCC | 4 cut(s) | 573, 978, 1560, 1870 |
| BtsCI | GGATG | 4 cut(s) | 10, 317, 1513, 1761 |
| BtsIMutI | CAGTG | 3 cut(s) | 503, 839, 1464 |
| BtuMI | TCGCGA | 1 cut(s) | 999 |
| BveI | ACCTGC | 1 cut(s) | 1514 |
| Cac8I | GCNNGC | 3 cut(s) | 1273, 1703, 1737 |
| CfoI | GCGC | 1 cut(s) | 203 |
| Cfr13I | GGNCC | 4 cut(s) | 572, 1538, 1559, 1869 |
| Csp6I | GTAC | 5 cut(s) | 96, 225, 510, 1640, 1878 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1204, 1239 |
| CviQI | GTAC | 5 cut(s) | 96, 225, 510, 1640, 1878 |
| DdeI | CTNAG | 6 cut(s) | 24, 263, 389, 1083, 1677, 1731 |
| DpnI | GATC | 6 cut(s) | 9, 33, 786, 1073, 1374, 1588 |
| DpnII | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| DraI | TTTAAA | 2 cut(s) | 102, 1716 |
| EaeI | YGGCCR | 1 cut(s) | 976 |
| Eam1104I | CTCTTC | 4 cut(s) | 119, 542, 679, 1136 |
| EarI | CTCTTC | 4 cut(s) | 119, 542, 679, 1136 |
| Ecl136II | GAGCTC | 2 cut(s) | 357, 1229 |
| Eco130I | CCWWGG | 1 cut(s) | 820 |
| Eco24I | GRGCYC | 4 cut(s) | 359, 554, 1231, 1730 |
| Eco31I | GGTCTC | 1 cut(s) | 1051 |
| Eco47I | GGWCC | 1 cut(s) | 1538 |
| Eco53kI | GAGCTC | 2 cut(s) | 357, 1229 |
| Eco57I | CTGAAG | 1 cut(s) | 1433 |
| Eco72I | CACGTG | 1 cut(s) | 840 |
| EcoICRI | GAGCTC | 2 cut(s) | 357, 1229 |
| EcoRI | GAATTC | 1 cut(s) | 1237 |
| EcoRII | CCWGG | 2 cut(s) | 655, 1899 |
| EcoT14I | CCWWGG | 1 cut(s) | 820 |
| EcoT38I | GRGCYC | 4 cut(s) | 359, 554, 1231, 1730 |
| ErhI | CCWWGG | 1 cut(s) | 820 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 592, 624 |
| FaqI | GGGAC | 1 cut(s) | 1631 |
| FauI | CCCGC | 2 cut(s) | 388, 1528 |
| FbaI | TGATCA | 2 cut(s) | 7, 784 |
| Fnu4HI | GCNGC | 3 cut(s) | 327, 801, 1341 |
| FokI | GGATG | 4 cut(s) | 17, 304, 1520, 1768 |
| FriOI | GRGCYC | 4 cut(s) | 359, 554, 1231, 1730 |
| Fsp4HI | GCNGC | 3 cut(s) | 327, 801, 1341 |
| FspBI | CTAG | 5 cut(s) | 597, 1016, 1125, 1259, 1289 |
| FspI | TGCGCA | 1 cut(s) | 202 |
| GlaI | GCGC | 1 cut(s) | 202 |
| GluI | GCNGC | 3 cut(s) | 327, 801, 1341 |
| GsaI | CCCAGC | 1 cut(s) | 1618 |
| GsuI | CTGGAG | 3 cut(s) | 483, 815, 1410 |
| HaeIII | GGCC | 4 cut(s) | 573, 978, 1560, 1870 |
| HapII | CCGG | 2 cut(s) | 37, 1867 |
| HhaI | GCGC | 1 cut(s) | 203 |
| Hin6I | GCGC | 1 cut(s) | 201 |
| HinP1I | GCGC | 1 cut(s) | 201 |
| HpaII | CCGG | 2 cut(s) | 37, 1867 |
| HphI | GGTGA | 7 cut(s) | 410, 554, 669, 1045, 1112, 1438, 1499 |
| Hpy166II | GTNNAC | 3 cut(s) | 182, 837, 1538 |
| Hpy188I | TCNGA | 6 cut(s) | 27, 730, 784, 1413, 1684, 1732 |
| Hpy188III | TCNNGA | 9 cut(s) | 87, 597, 941, 998, 1138, 1180, 1232, 1280, 1466 |
| Hpy8I | GTNNAC | 3 cut(s) | 182, 837, 1538 |
| Hpy99I | CGWCG | 1 cut(s) | 291 |
| HpyAV | CCTTC | 8 cut(s) | 86, 572, 838, 880, 907, 1024, 1572, 1869 |
| HpyCH4III | ACNGT | 7 cut(s) | 229, 498, 514, 814, 1601, 1607, 1639 |
| HpyCH4IV | ACGT | 3 cut(s) | 339, 758, 839 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 291, 323, 806, 1656 |
| HpyF3I | CTNAG | 6 cut(s) | 24, 263, 389, 1083, 1677, 1731 |
| HpySE526I | ACGT | 3 cut(s) | 339, 758, 839 |
| HspAI | GCGC | 1 cut(s) | 201 |
| Ksp22I | TGATCA | 2 cut(s) | 7, 784 |
| Kzo9I | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| LguI | GCTCTTC | 1 cut(s) | 542 |
| LmnI | GCTCC | 3 cut(s) | 522, 834, 1226 |
| Lsp1109I | GCAGC | 3 cut(s) | 338, 812, 1327 |
| LweI | GCATC | 5 cut(s) | 281, 326, 1104, 1273, 1746 |
| MaeI | CTAG | 5 cut(s) | 597, 1016, 1125, 1259, 1289 |
| MaeII | ACGT | 3 cut(s) | 339, 758, 839 |
| MaeIII | GTNAC | 5 cut(s) | 422, 737, 1008, 1187, 1601 |
| MalI | GATC | 6 cut(s) | 9, 33, 786, 1073, 1374, 1588 |
| MboI | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| MfeI | CAATTG | 2 cut(s) | 1344, 1827 |
| MflI | RGATCY | 1 cut(s) | 1586 |
| MhlI | GDGCHC | 6 cut(s) | 359, 554, 839, 1231, 1631, 1730 |
| MlsI | TGGCCA | 1 cut(s) | 978 |
| MluNI | TGGCCA | 1 cut(s) | 978 |
| MlyI | GAGTC | 6 cut(s) | 419, 764, 1016, 1259, 1681, 1849 |
| Mox20I | TGGCCA | 1 cut(s) | 978 |
| MroXI | GAANNNNTTC | 3 cut(s) | 279, 303, 607 |
| MscI | TGGCCA | 1 cut(s) | 978 |
| MseI | TTAA | 8 cut(s) | 101, 174, 665, 705, 717, 1644, 1715, 1751 |
| MslI | CAYNNNNRTG | 1 cut(s) | 312 |
| Msp20I | TGGCCA | 1 cut(s) | 978 |
| MspI | CCGG | 2 cut(s) | 37, 1867 |
| MspR9I | CCNGG | 3 cut(s) | 38, 657, 1901 |
| MunI | CAATTG | 2 cut(s) | 1344, 1827 |
| Mva1269I | GAATGC | 2 cut(s) | 452, 831 |
| MvaI | CCWGG | 2 cut(s) | 657, 1901 |
| MvnI | CGCG | 1 cut(s) | 999 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 291, 323, 806, 1656 |
| NciI | CCSGG | 1 cut(s) | 38 |
| NdeII | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| NlaIV | GGNNCC | 2 cut(s) | 574, 1628 |
| NmuCI | GTSAC | 5 cut(s) | 422, 737, 1008, 1187, 1601 |
| NruI | TCGCGA | 1 cut(s) | 999 |
| NsbI | TGCGCA | 1 cut(s) | 202 |
| NspI | RCATGY | 2 cut(s) | 423, 1739 |
| PaeI | GCATGC | 1 cut(s) | 1739 |
| PciI | ACATGT | 1 cut(s) | 419 |
| PciSI | GCTCTTC | 1 cut(s) | 542 |
| PctI | GAATGC | 2 cut(s) | 452, 831 |
| PdmI | GAANNNNTTC | 3 cut(s) | 279, 303, 607 |
| PfeI | GAWTC | 6 cut(s) | 247, 304, 593, 725, 853, 994 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 909 |
| PkrI | GCNGC | 3 cut(s) | 328, 802, 1342 |
| PleI | GAGTC | 6 cut(s) | 419, 764, 1015, 1258, 1681, 1849 |
| PmaCI | CACGTG | 1 cut(s) | 840 |
| PmlI | CACGTG | 1 cut(s) | 840 |
| PpsI | GAGTC | 6 cut(s) | 419, 764, 1015, 1258, 1681, 1849 |
| Ppu21I | YACGTR | 2 cut(s) | 759, 840 |
| PscI | ACATGT | 1 cut(s) | 419 |
| PsiI | TTATAA | 1 cut(s) | 17 |
| Psp124BI | GAGCTC | 2 cut(s) | 359, 1231 |
| Psp6I | CCWGG | 2 cut(s) | 655, 1899 |
| PspCI | CACGTG | 1 cut(s) | 840 |
| PspFI | CCCAGC | 1 cut(s) | 1614 |
| PspGI | CCWGG | 2 cut(s) | 655, 1899 |
| PspN4I | GGNNCC | 2 cut(s) | 574, 1628 |
| PspPI | GGNCC | 4 cut(s) | 572, 1538, 1559, 1869 |
| PstI | CTGCAG | 1 cut(s) | 493 |
| PsuI | RGATCY | 1 cut(s) | 1586 |
| RruI | TCGCGA | 1 cut(s) | 999 |
| RsaI | GTAC | 5 cut(s) | 97, 226, 511, 1641, 1879 |
| RsaNI | GTAC | 5 cut(s) | 96, 225, 510, 1640, 1878 |
| RseI | CAYNNNNRTG | 1 cut(s) | 312 |
| SacI | GAGCTC | 2 cut(s) | 359, 1231 |
| SapI | GCTCTTC | 1 cut(s) | 542 |
| SaqAI | TTAA | 8 cut(s) | 101, 174, 665, 705, 717, 1644, 1715, 1751 |
| SatI | GCNGC | 3 cut(s) | 327, 801, 1341 |
| Sau3AI | GATC | 6 cut(s) | 7, 31, 784, 1071, 1372, 1586 |
| Sau96I | GGNCC | 4 cut(s) | 572, 1538, 1559, 1869 |
| SbfI | CCTGCAGG | 1 cut(s) | 493 |
| ScaI | AGTACT | 2 cut(s) | 226, 1641 |
| SchI | GAGTC | 6 cut(s) | 419, 764, 1016, 1259, 1681, 1849 |
| ScrFI | CCNGG | 3 cut(s) | 38, 657, 1901 |
| SdaI | CCTGCAGG | 1 cut(s) | 493 |
| SduI | GDGCHC | 6 cut(s) | 359, 554, 839, 1231, 1631, 1730 |
| SfaNI | GCATC | 5 cut(s) | 281, 326, 1104, 1273, 1746 |
| SfcI | CTRYAG | 2 cut(s) | 489, 873 |
| SinI | GGWCC | 1 cut(s) | 1538 |
| SmiI | ATTTAAAT | 1 cut(s) | 1716 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 312 |
| SmlI | CTYRAG | 3 cut(s) | 1136, 1232, 1689 |
| SmoI | CTYRAG | 3 cut(s) | 1136, 1232, 1689 |
| SphI | GCATGC | 1 cut(s) | 1739 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 493 |
| SsiI | CCGC | 2 cut(s) | 395, 1521 |
| SspI | AATATT | 1 cut(s) | 541 |
| SspMI | CTAG | 5 cut(s) | 597, 1016, 1125, 1259, 1289 |
| SstI | GAGCTC | 2 cut(s) | 359, 1231 |
| StyD4I | CCNGG | 3 cut(s) | 36, 655, 1899 |
| StyI | CCWWGG | 1 cut(s) | 820 |
| SwaI | ATTTAAAT | 1 cut(s) | 1716 |
| TaaI | ACNGT | 7 cut(s) | 229, 498, 514, 814, 1601, 1607, 1639 |
| TaiI | ACGT | 3 cut(s) | 342, 761, 842 |
| TaqI | TCGA | 5 cut(s) | 289, 629, 1157, 1467, 1477 |
| TatI | WGTACW | 3 cut(s) | 224, 1639, 1877 |
| TfiI | GAWTC | 6 cut(s) | 247, 304, 593, 725, 853, 994 |
| Tru1I | TTAA | 8 cut(s) | 101, 174, 665, 705, 717, 1644, 1715, 1751 |
| Tru9I | TTAA | 8 cut(s) | 101, 174, 665, 705, 717, 1644, 1715, 1751 |
| TscAI | CASTG | 3 cut(s) | 503, 839, 1464 |
| TseFI | GTSAC | 5 cut(s) | 422, 737, 1008, 1187, 1601 |
| TseI | GCWGC | 3 cut(s) | 326, 800, 1340 |
| Tsp45I | GTSAC | 5 cut(s) | 422, 737, 1008, 1187, 1601 |
| TspDTI | ATGAA | 9 cut(s) | 288, 296, 459, 738, 894, 1043, 1367, 1520, 1778 |
| TspRI | CASTG | 3 cut(s) | 503, 839, 1464 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 909 |
| VneI | GTGCAC | 1 cut(s) | 835 |
| VpaK11BI | GGWCC | 1 cut(s) | 1538 |
| XapI | RAATTY | 8 cut(s) | 278, 349, 696, 1237, 1300, 1327, 1406, 1717 |
| XbaI | TCTAGA | 1 cut(s) | 596 |
| XceI | RCATGY | 2 cut(s) | 423, 1739 |
| XmnI | GAANNNNTTC | 3 cut(s) | 279, 303, 607 |
| XspI | CTAG | 5 cut(s) | 597, 1016, 1125, 1259, 1289 |
| ZrmI | AGTACT | 2 cut(s) | 226, 1641 |