Rh4DG053400

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0004960
Physical Location & Seq
Reverse (-)
8383814 .. 8390083
6270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG053400.1

Sequence Viewer

Length: 1767 bp
ATGGATGATCAAGTTATAATTCCTCAGAAAGATCGCCGGGGAAAAGAGGATACATCTCATAGATTGAGCAAGGAGAGAGTATTATCAAGAGAAGGTACTTTAAAATCCTCTGGATCAAAATTGAAAAGGTTGGTCAAAATGGCAAATCCACAGCATCCTCTAATTTCAAATGTTAATAGTTCACAAATTAGTAGATGTTGCGCAAAAAGTCCATTGTTTCAAAGTACTGTTGACGTTGAGAGTAGGATTCCAAAGCATATACTGAGCGTAGATGAAAAATTTCGCCGTCGATGCTTGGAATTGATTCATATTAGTGCATCCAAAGCAGCCCAATGCAACGTAGCTGTGAATTTGAGCTCTGCGAAGATGGGTGTTTTAGCTGAAAGCCTTAGTGCGGGTGATATTAGAAGTGGAGATACATGTGACTCTGCGAGGTTTGTTTATGAATGCCCATTGGAAGCTGGAGGTGGGAGTGTTGTCATAAGCCCTGCAGGACAGTGGATTGTAGGTACAGTTATGGGGAGCAAGAGCATGATAAATATTTTGAAGAGCCCTTTGTTTCACCAAGTTGGCCCCGAAGGTGGCAATGCAGATTCTAGAAGAATAACTTCAAATGATGACAAAGCCTCGATATGCTATGATTTAGCAGAGTGTCCTGGTGCATTAACTTTCTCTTCACCGAAGACAGAAATGGAAATTCCAGTTAAGGGAAGCATTAAAAATGAATCTGATGGGGGTCACAAAAGGCTTGTTTCTACGTGTAGCATAGACTCTCCATCTTCTGATCAATCTTCCCGTGCGGCTCTTGCCACCGTTTCCCAAGGAATGCTCCAGTGCACGTGGAAGGGAGGGAATCCTCATTTTGTTTTCTCTACAGATGAACAGAAGGAGGTCTATGTAGCCAATTTGTGGAAGGTTCAGTCTAAAGAGGACAAGTCTCTGGATTATATATACTTGTTCCATGCAGGAAAGGGTGGCCAAAAGAGCCATGAGATTCGCGATAGTGAGTCACACCTAGTCGGTAAGATGAAGGTGAGTAATTTGGTCTCTCTCTGCTCAAACAATTCAAAGATCATGGAGACTGAGTTTGTTTTGTATGGTGGTGGTATTGAGATGCACACTTCTAGCCATAATCTCAAGAAGAGTAAGGGGTTATCGAAAAAGATGGCGGGAGTGTTCAGGACAAGTCACTTATCCAAACAAAAAACCATCTCCAAATTGAGTGGAGCTCTTGAGAATTCTTCTTGGGAGTCATGCCTAGATGATACAGCCAGCAATCAAGATGCTCTAGGTCTGCCAAATTTGTTAGAAGATAACCTCCCTCCAAATTTGGAATTGGCTGCAATTGTTATGAAAGACCATCTCCCTGATGATCATAAGGAGGAAGCTGGAGGTTGGGGTTTGAAATTTCTGAAGAAAGTTGGGGTGAAGAAAACCAATAACTCTGTGGAAGTGTCAGTGCCTCTCGAATGTTGTCGAAATAATGGTGATTGCTCTACAAGTATGGATGTTCTAATCCCTGCAGGTCTTCATGGTGGACCAAGAACCAGAAATGGTGGCCCTTCAAGTCTTACTGAAAGATGGAGATCTGGTGGATACTGTGACTGTGGTGGCTGGGACATGGGGTGCCCTGTCACAGTACTTAAAAGCAAATCAAGCAAAGAGGACATTTTGCCTCAGTCAGATACTCAAGGGGAGTGCAAGCCGTTTGATTTAAATATACAGGTATACCAAACTCCCATCAACACATCCCCTTTAATATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3527

Protein Analysis

588

Amino Acids

63.82

Weight (kDa)

8.28

Isoelectric Point (pI)

53.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 271 - 575 2.9e-107 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 17
Acc16I TGCGCA 1 cut(s) 202
Acc36I ACCTGC 1 cut(s) 1514
AccB1I GGYRCC 1 cut(s) 1626
AccB7I CCANNNNNTGG 1 cut(s) 909
AccI GTMKAC 1 cut(s) 1728
AccII CGCG 1 cut(s) 999
AciI CCGC 3 cut(s) 395, 800, 1169
AclWI GGATC 1 cut(s) 121
AcoI YGGCCR 1 cut(s) 976
AcsI RAATTY 7 cut(s) 278, 349, 696, 1237, 1300, 1327, 1406
AcuI CTGAAG 1 cut(s) 1433
AcvI CACGTG 1 cut(s) 840
AfaI GTAC 4 cut(s) 97, 226, 511, 1641
AfiI CCNNNNNNNGG 4 cut(s) 394, 581, 707, 909
AflIII ACRYGT 2 cut(s) 419, 758
AgsI TTSAA 8 cut(s) 124, 168, 221, 547, 612, 1068, 1405, 1566
AjnI CCWGG 1 cut(s) 655
AluBI AGCT 6 cut(s) 344, 357, 380, 461, 1229, 1388
AluI AGCT 6 cut(s) 344, 357, 380, 461, 1229, 1388
Alw21I GWGCWC 3 cut(s) 359, 839, 1231
Alw26I GTCTC 3 cut(s) 942, 1051, 1073
Alw44I GTGCAC 1 cut(s) 835
AlwI GGATC 1 cut(s) 121
AoxI GGCC 3 cut(s) 571, 976, 1558
ApaLI GTGCAC 1 cut(s) 835
ApeKI GCWGC 2 cut(s) 326, 1340
ApoI RAATTY 7 cut(s) 278, 349, 696, 1237, 1300, 1327, 1406
Asp700I GAANNNNTTC 3 cut(s) 279, 303, 607
AspLEI GCGC 1 cut(s) 203
AspS9I GGNCC 3 cut(s) 572, 1538, 1559
AsuC2I CCSGG 1 cut(s) 38
AsuHPI GGTGA 6 cut(s) 410, 554, 669, 1045, 1438, 1499
AvaII GGWCC 1 cut(s) 1538
BaeGI GKGCMC 2 cut(s) 839, 1631
BalI TGGCCA 1 cut(s) 978
BanI GGYRCC 1 cut(s) 1626
BanII GRGCYC 3 cut(s) 359, 554, 1231
BarI GAAGNNNNNNTAC 2 cut(s) 400, 432
BbrPI CACGTG 1 cut(s) 840
BbsI GAAGAC 2 cut(s) 689, 1520
Bbv12I GWGCWC 3 cut(s) 359, 839, 1231
BbvI GCAGC 2 cut(s) 338, 1327
BccI CCATC 8 cut(s) 361, 725, 784, 1159, 1217, 1368, 1575, 1748
BceAI ACGGC 2 cut(s) 270, 1690
BciT130I CCWGG 1 cut(s) 657
BciVI GTATCC 2 cut(s) 43, 1589
BclI TGATCA 3 cut(s) 7, 784, 1372
BcnI CCSGG 1 cut(s) 38
BcoDI GTCTC 3 cut(s) 942, 1051, 1073
BfaI CTAG 5 cut(s) 597, 1016, 1125, 1259, 1289
BfmI CTRYAG 3 cut(s) 489, 873, 1521
BfuAI ACCTGC 1 cut(s) 1514
BfuI GTATCC 2 cut(s) 43, 1589
BglII AGATCT 1 cut(s) 1586
BisI GCNGC 3 cut(s) 327, 801, 1341
BlsI GCNGC 3 cut(s) 328, 802, 1342
BmcAI AGTACT 2 cut(s) 226, 1641
Bme1390I CCNGG 2 cut(s) 38, 657
Bme18I GGWCC 1 cut(s) 1538
BmgT120I GGNCC 3 cut(s) 572, 1538, 1559
BmiI GGNNCC 2 cut(s) 574, 1628
BmrFI CCNGG 2 cut(s) 38, 657
BmsI GCATC 5 cut(s) 163, 281, 326, 1104, 1273
BpiI GAAGAC 2 cut(s) 689, 1520
BplI GAGNNNNNCTC 2 cut(s) 1213, 1245
BpmI CTGGAG 3 cut(s) 483, 815, 1410
BpuEI CTTGAG 3 cut(s) 1121, 1253, 1674
BpuMI CCSGG 1 cut(s) 38
BsaAI YACGTR 2 cut(s) 759, 840
BsaBI GATNNNNATC 1 cut(s) 1585
BsaI GGTCTC 1 cut(s) 1051
BsaJI CCNNGG 2 cut(s) 37, 820
BsaXI ACNNNNNCTCC 4 cut(s) 1070, 1100, 1576, 1606
Bsc4I CCNNNNNNNGG 4 cut(s) 394, 581, 707, 909
Bse1I ACTGG 2 cut(s) 701, 832
Bse3DI GCAATG 1 cut(s) 592
Bse8I GATNNNNATC 1 cut(s) 1585
BseBI CCWGG 1 cut(s) 657
BseDI CCNNGG 2 cut(s) 37, 820
BseGI GGATG 5 cut(s) 10, 154, 317, 1513, 1748
BseJI GATNNNNATC 1 cut(s) 1585
BseLI CCNNNNNNNGG 4 cut(s) 394, 581, 707, 909
BseMI GCAATG 1 cut(s) 592
BseMII CTCAG 4 cut(s) 38, 254, 1074, 1691
BseNI ACTGG 2 cut(s) 701, 832
BseSI GKGCMC 2 cut(s) 839, 1631
BseXI GCAGC 2 cut(s) 338, 1327
BseYI CCCAGC 1 cut(s) 1614
Bsh1236I CGCG 1 cut(s) 999
BshFI GGCC 3 cut(s) 573, 978, 1560
BshNI GGYRCC 1 cut(s) 1626
BsiHKAI GWGCWC 3 cut(s) 359, 839, 1231
BsiSI CCGG 1 cut(s) 37
BslFI GGGAC 1 cut(s) 1631
BslI CCNNNNNNNGG 4 cut(s) 394, 581, 707, 909
BsmAI GTCTC 3 cut(s) 942, 1051, 1073
BsmFI GGGAC 1 cut(s) 1631
BsmI GAATGC 2 cut(s) 452, 831
BsnI GGCC 3 cut(s) 573, 978, 1560
Bso31I GGTCTC 1 cut(s) 1051
Bsp1286I GDGCHC 5 cut(s) 359, 554, 839, 1231, 1631
Bsp143I GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
Bsp68I TCGCGA 1 cut(s) 999
BspACI CCGC 3 cut(s) 395, 800, 1169
BspANI GGCC 3 cut(s) 573, 978, 1560
BspCNI CTCAG 4 cut(s) 37, 255, 1075, 1690
BspFNI CGCG 1 cut(s) 999
BspLI GGNNCC 2 cut(s) 574, 1628
BspMAI CTGCAG 2 cut(s) 493, 1525
BspMI ACCTGC 1 cut(s) 1514
BspPI GGATC 1 cut(s) 121
BspQI GCTCTTC 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 1626
BspTNI GGTCTC 1 cut(s) 1051
BsrDI GCAATG 1 cut(s) 592
BsrI ACTGG 2 cut(s) 701, 832
BssECI CCNNGG 2 cut(s) 37, 820
BssMI GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
BssNAI GTATAC 1 cut(s) 1729
BssT1I CCWWGG 1 cut(s) 820
Bst1107I GTATAC 1 cut(s) 1729
Bst2UI CCWGG 1 cut(s) 657
Bst4CI ACNGT 7 cut(s) 229, 498, 514, 814, 1601, 1607, 1639
Bst6I CTCTTC 3 cut(s) 542, 679, 1136
BstBAI YACGTR 2 cut(s) 759, 840
BstC8I GCNNGC 2 cut(s) 1273, 1703
BstDEI CTNAG 5 cut(s) 24, 263, 389, 1083, 1677
BstF5I GGATG 5 cut(s) 10, 154, 317, 1513, 1748
BstFNI CGCG 1 cut(s) 999
BstHHI GCGC 1 cut(s) 203
BstKTI GATC 7 cut(s) 10, 34, 116, 787, 1074, 1375, 1589
BstMAI GTCTC 3 cut(s) 942, 1051, 1073
BstMBI GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
BstMWI GCNNNNNNNGC 5 cut(s) 291, 323, 806, 984, 1656
BstNI CCWGG 1 cut(s) 657
BstNSI RCATGY 1 cut(s) 423
BstSCI CCNGG 2 cut(s) 36, 655
BstSFI CTRYAG 3 cut(s) 489, 873, 1521
BstSLI GKGCMC 2 cut(s) 839, 1631
BstUI CGCG 1 cut(s) 999
BstV1I GCAGC 2 cut(s) 338, 1327
BstV2I GAAGAC 2 cut(s) 689, 1520
BstX2I RGATCY 1 cut(s) 1586
BstYI RGATCY 1 cut(s) 1586
BstZ17I GTATAC 1 cut(s) 1729
BsuI GTATCC 2 cut(s) 43, 1589
BsuRI GGCC 3 cut(s) 573, 978, 1560
BtsCI GGATG 5 cut(s) 10, 154, 317, 1513, 1748
BtsIMutI CAGTG 3 cut(s) 503, 839, 1464
BtuMI TCGCGA 1 cut(s) 999
BveI ACCTGC 1 cut(s) 1514
Cac8I GCNNGC 2 cut(s) 1273, 1703
CfoI GCGC 1 cut(s) 203
Cfr13I GGNCC 3 cut(s) 572, 1538, 1559
Csp6I GTAC 4 cut(s) 96, 225, 510, 1640
CspCI CAANNNNNGTGG 2 cut(s) 1204, 1239
CviAII CATG 8 cut(s) 420, 532, 962, 989, 1075, 1254, 1532, 1621
CviQI GTAC 4 cut(s) 96, 225, 510, 1640
DdeI CTNAG 5 cut(s) 24, 263, 389, 1083, 1677
DpnI GATC 7 cut(s) 9, 33, 115, 786, 1073, 1374, 1588
DpnII GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
DraI TTTAAA 2 cut(s) 102, 1716
EaeI YGGCCR 1 cut(s) 976
Eam1104I CTCTTC 3 cut(s) 542, 679, 1136
EarI CTCTTC 3 cut(s) 542, 679, 1136
Ecl136II GAGCTC 2 cut(s) 357, 1229
Eco130I CCWWGG 1 cut(s) 820
Eco24I GRGCYC 3 cut(s) 359, 554, 1231
Eco31I GGTCTC 1 cut(s) 1051
Eco47I GGWCC 1 cut(s) 1538
Eco53kI GAGCTC 2 cut(s) 357, 1229
Eco57I CTGAAG 1 cut(s) 1433
Eco72I CACGTG 1 cut(s) 840
EcoICRI GAGCTC 2 cut(s) 357, 1229
EcoRI GAATTC 1 cut(s) 1237
EcoRII CCWGG 1 cut(s) 655
EcoT14I CCWWGG 1 cut(s) 820
EcoT38I GRGCYC 3 cut(s) 359, 554, 1231
ErhI CCWWGG 1 cut(s) 820
FaeI CATG 8 cut(s) 423, 535, 965, 992, 1078, 1257, 1535, 1624
FalI AAGNNNNNCTT 2 cut(s) 592, 624
FaqI GGGAC 1 cut(s) 1631
FatI CATG 8 cut(s) 419, 531, 961, 988, 1074, 1253, 1531, 1620
FauI CCCGC 2 cut(s) 388, 1162
FbaI TGATCA 3 cut(s) 7, 784, 1372
FblI GTMKAC 1 cut(s) 1728
Fnu4HI GCNGC 3 cut(s) 327, 801, 1341
FokI GGATG 5 cut(s) 17, 141, 304, 1520, 1735
FriOI GRGCYC 3 cut(s) 359, 554, 1231
Fsp4HI GCNGC 3 cut(s) 327, 801, 1341
FspBI CTAG 5 cut(s) 597, 1016, 1125, 1259, 1289
FspI TGCGCA 1 cut(s) 202
GlaI GCGC 1 cut(s) 202
GluI GCNGC 3 cut(s) 327, 801, 1341
GsaI CCCAGC 1 cut(s) 1618
GsuI CTGGAG 3 cut(s) 483, 815, 1410
HaeIII GGCC 3 cut(s) 573, 978, 1560
HapII CCGG 1 cut(s) 37
HhaI GCGC 1 cut(s) 203
Hin1II CATG 8 cut(s) 423, 535, 965, 992, 1078, 1257, 1535, 1624
Hin6I GCGC 1 cut(s) 201
HinP1I GCGC 1 cut(s) 201
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HpaII CCGG 1 cut(s) 37
HphI GGTGA 6 cut(s) 410, 554, 669, 1045, 1438, 1499
Hpy166II GTNNAC 5 cut(s) 182, 232, 837, 1538, 1729
Hpy188I TCNGA 5 cut(s) 27, 730, 784, 1413, 1684
Hpy8I GTNNAC 5 cut(s) 182, 232, 837, 1538, 1729
Hpy99I CGWCG 1 cut(s) 291
HpyAV CCTTC 7 cut(s) 86, 572, 838, 880, 907, 1024, 1572
HpyCH4III ACNGT 7 cut(s) 229, 498, 514, 814, 1601, 1607, 1639
HpyCH4IV ACGT 4 cut(s) 234, 339, 758, 839
HpyF10VI GCNNNNNNNGC 5 cut(s) 291, 323, 806, 984, 1656
HpyF3I CTNAG 5 cut(s) 24, 263, 389, 1083, 1677
HpySE526I ACGT 4 cut(s) 234, 339, 758, 839
Hsp92II CATG 8 cut(s) 423, 535, 965, 992, 1078, 1257, 1535, 1624
HspAI GCGC 1 cut(s) 201
Ksp22I TGATCA 3 cut(s) 7, 784, 1372
Kzo9I GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
LguI GCTCTTC 1 cut(s) 542
LmnI GCTCC 3 cut(s) 522, 834, 1226
Lsp1109I GCAGC 2 cut(s) 338, 1327
LweI GCATC 5 cut(s) 163, 281, 326, 1104, 1273
MaeI CTAG 5 cut(s) 597, 1016, 1125, 1259, 1289
MaeII ACGT 4 cut(s) 234, 339, 758, 839
MaeIII GTNAC 6 cut(s) 422, 737, 1008, 1187, 1601, 1633
MalI GATC 7 cut(s) 9, 33, 115, 786, 1073, 1374, 1588
MboI GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
MfeI CAATTG 1 cut(s) 1344
MflI RGATCY 1 cut(s) 1586
MhlI GDGCHC 5 cut(s) 359, 554, 839, 1231, 1631
MlsI TGGCCA 1 cut(s) 978
MluNI TGGCCA 1 cut(s) 978
MlyI GAGTC 4 cut(s) 419, 764, 1016, 1259
Mox20I TGGCCA 1 cut(s) 978
MroXI GAANNNNTTC 3 cut(s) 279, 303, 607
MscI TGGCCA 1 cut(s) 978
MseI TTAA 9 cut(s) 101, 174, 665, 705, 717, 1644, 1715, 1757, 1765
MslI CAYNNNNRTG 1 cut(s) 312
Msp20I TGGCCA 1 cut(s) 978
MspI CCGG 1 cut(s) 37
MspR9I CCNGG 2 cut(s) 38, 657
MunI CAATTG 1 cut(s) 1344
Mva1269I GAATGC 2 cut(s) 452, 831
MvaI CCWGG 1 cut(s) 657
MvnI CGCG 1 cut(s) 999
MwoI GCNNNNNNNGC 5 cut(s) 291, 323, 806, 984, 1656
NciI CCSGG 1 cut(s) 38
NdeII GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
NlaIII CATG 8 cut(s) 423, 535, 965, 992, 1078, 1257, 1535, 1624
NlaIV GGNNCC 2 cut(s) 574, 1628
NmuCI GTSAC 6 cut(s) 422, 737, 1008, 1187, 1601, 1633
NruI TCGCGA 1 cut(s) 999
NsbI TGCGCA 1 cut(s) 202
NspI RCATGY 1 cut(s) 423
PciI ACATGT 1 cut(s) 419
PciSI GCTCTTC 1 cut(s) 542
PctI GAATGC 2 cut(s) 452, 831
PdmI GAANNNNTTC 3 cut(s) 279, 303, 607
PfeI GAWTC 6 cut(s) 247, 304, 593, 725, 853, 994
PflMI CCANNNNNTGG 1 cut(s) 909
PkrI GCNGC 3 cut(s) 328, 802, 1342
PleI GAGTC 4 cut(s) 419, 764, 1015, 1258
PmaCI CACGTG 1 cut(s) 840
PmlI CACGTG 1 cut(s) 840
PpsI GAGTC 4 cut(s) 419, 764, 1015, 1258
Ppu21I YACGTR 2 cut(s) 759, 840
PscI ACATGT 1 cut(s) 419
PsiI TTATAA 1 cut(s) 17
Psp124BI GAGCTC 2 cut(s) 359, 1231
Psp6I CCWGG 1 cut(s) 655
PspCI CACGTG 1 cut(s) 840
PspFI CCCAGC 1 cut(s) 1614
PspGI CCWGG 1 cut(s) 655
PspN4I GGNNCC 2 cut(s) 574, 1628
PspPI GGNCC 3 cut(s) 572, 1538, 1559
PstI CTGCAG 2 cut(s) 493, 1525
PsuI RGATCY 1 cut(s) 1586
RruI TCGCGA 1 cut(s) 999
RsaI GTAC 4 cut(s) 97, 226, 511, 1641
RsaNI GTAC 4 cut(s) 96, 225, 510, 1640
RseI CAYNNNNRTG 1 cut(s) 312
SacI GAGCTC 2 cut(s) 359, 1231
SapI GCTCTTC 1 cut(s) 542
SaqAI TTAA 9 cut(s) 101, 174, 665, 705, 717, 1644, 1715, 1757, 1765
SatI GCNGC 3 cut(s) 327, 801, 1341
Sau3AI GATC 7 cut(s) 7, 31, 113, 784, 1071, 1372, 1586
Sau96I GGNCC 3 cut(s) 572, 1538, 1559
SbfI CCTGCAGG 2 cut(s) 493, 1525
ScaI AGTACT 2 cut(s) 226, 1641
SchI GAGTC 4 cut(s) 419, 764, 1016, 1259
ScrFI CCNGG 2 cut(s) 38, 657
SdaI CCTGCAGG 2 cut(s) 493, 1525
SduI GDGCHC 5 cut(s) 359, 554, 839, 1231, 1631
SfaNI GCATC 5 cut(s) 163, 281, 326, 1104, 1273
SfcI CTRYAG 3 cut(s) 489, 873, 1521
SinI GGWCC 1 cut(s) 1538
SmiI ATTTAAAT 1 cut(s) 1716
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 3 cut(s) 1136, 1232, 1689
SmoI CTYRAG 3 cut(s) 1136, 1232, 1689
Sse8387I CCTGCAGG 2 cut(s) 493, 1525
SsiI CCGC 3 cut(s) 395, 800, 1169
SspI AATATT 1 cut(s) 541
SspMI CTAG 5 cut(s) 597, 1016, 1125, 1259, 1289
SstI GAGCTC 2 cut(s) 359, 1231
StyD4I CCNGG 2 cut(s) 36, 655
StyI CCWWGG 1 cut(s) 820
SwaI ATTTAAAT 1 cut(s) 1716
TaaI ACNGT 7 cut(s) 229, 498, 514, 814, 1601, 1607, 1639
TaiI ACGT 4 cut(s) 237, 342, 761, 842
TaqI TCGA 5 cut(s) 289, 629, 1157, 1467, 1477
TatI WGTACW 2 cut(s) 224, 1639
TauI GCSGC 1 cut(s) 803
TfiI GAWTC 6 cut(s) 247, 304, 593, 725, 853, 994
Tru1I TTAA 9 cut(s) 101, 174, 665, 705, 717, 1644, 1715, 1757, 1765
Tru9I TTAA 9 cut(s) 101, 174, 665, 705, 717, 1644, 1715, 1757, 1765
TscAI CASTG 3 cut(s) 503, 839, 1464
TseFI GTSAC 6 cut(s) 422, 737, 1008, 1187, 1601, 1633
TseI GCWGC 2 cut(s) 326, 1340
Tsp45I GTSAC 6 cut(s) 422, 737, 1008, 1187, 1601, 1633
TspDTI ATGAA 8 cut(s) 288, 296, 459, 738, 894, 1043, 1367, 1520
TspRI CASTG 3 cut(s) 503, 839, 1464
Van91I CCANNNNNTGG 1 cut(s) 909
VneI GTGCAC 1 cut(s) 835
VpaK11BI GGWCC 1 cut(s) 1538
XapI RAATTY 7 cut(s) 278, 349, 696, 1237, 1300, 1327, 1406
XbaI TCTAGA 1 cut(s) 596
XceI RCATGY 1 cut(s) 423
XcmI CCANNNNNNNNNTGG 1 cut(s) 1444
XmiI GTMKAC 1 cut(s) 1728
XmnI GAANNNNTTC 3 cut(s) 279, 303, 607
XspI CTAG 5 cut(s) 597, 1016, 1125, 1259, 1289
ZrmI AGTACT 2 cut(s) 226, 1641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.