Protein FAR1-RELATED SEQUENCE 2 isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 906 |
| Acc36I | ACCTGC | 1 cut(s) | 727 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 673, 2287 |
| AccBSI | CCGCTC | 1 cut(s) | 255 |
| AccI | GTMKAC | 1 cut(s) | 1843 |
| AciI | CCGC | 7 cut(s) | 228, 255, 1049, 1069, 1981, 2181, 2184 |
| AclWI | GGATC | 3 cut(s) | 168, 2634, 2647 |
| AcoI | YGGCCR | 1 cut(s) | 1093 |
| AcsI | RAATTY | 4 cut(s) | 500, 963, 1658, 1762 |
| AfaI | GTAC | 7 cut(s) | 1007, 1478, 1520, 1544, 2079, 2254, 2662 |
| AfeI | AGCGCT | 1 cut(s) | 1910 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 386, 673, 983, 2287 |
| AgeI | ACCGGT | 1 cut(s) | 1275 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 859, 891 |
| Alw21I | GWGCWC | 5 cut(s) | 587, 2311, 2380, 2401, 2578 |
| Alw26I | GTCTC | 6 cut(s) | 41, 74, 395, 709, 1034, 2040 |
| AlwI | GGATC | 3 cut(s) | 168, 2634, 2647 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 915 |
| Aor51HI | AGCGCT | 1 cut(s) | 1910 |
| AoxI | GGCC | 1 cut(s) | 1093 |
| ApeKI | GCWGC | 3 cut(s) | 591, 1562, 1978 |
| ApoI | RAATTY | 4 cut(s) | 500, 963, 1658, 1762 |
| AseI | ATTAAT | 1 cut(s) | 690 |
| AsiGI | ACCGGT | 1 cut(s) | 1275 |
| AspLEI | GCGC | 2 cut(s) | 483, 1911 |
| AspS9I | GGNCC | 2 cut(s) | 1858, 2526 |
| AsuHPI | GGTGA | 4 cut(s) | 269, 1599, 1679, 2030 |
| AvaII | GGWCC | 2 cut(s) | 1858, 2526 |
| BalI | TGGCCA | 1 cut(s) | 1095 |
| BamHI | GGATCC | 1 cut(s) | 2639 |
| BanII | GRGCYC | 1 cut(s) | 1396 |
| BauI | CACGAG | 1 cut(s) | 276 |
| Bbv12I | GWGCWC | 5 cut(s) | 587, 2311, 2380, 2401, 2578 |
| BbvCI | CCTCAGC | 1 cut(s) | 2337 |
| BbvI | GCAGC | 3 cut(s) | 578, 1549, 1990 |
| BccI | CCATC | 9 cut(s) | 667, 674, 1182, 1302, 1897, 2143, 2243, 2281, 2447 |
| BceAI | ACGGC | 2 cut(s) | 1772, 1991 |
| BclI | TGATCA | 1 cut(s) | 1120 |
| BcoDI | GTCTC | 6 cut(s) | 41, 74, 395, 709, 1034, 2040 |
| BfaI | CTAG | 3 cut(s) | 51, 528, 1203 |
| BfmI | CTRYAG | 7 cut(s) | 427, 749, 1044, 1146, 1840, 1969, 2634 |
| BfoI | RGCGCY | 2 cut(s) | 484, 1912 |
| BfuAI | ACCTGC | 1 cut(s) | 727 |
| BglII | AGATCT | 2 cut(s) | 10, 2620 |
| BisI | GCNGC | 6 cut(s) | 228, 592, 1050, 1563, 1979, 2182 |
| BlpI | GCTNAGC | 1 cut(s) | 2400 |
| BlsI | GCNGC | 6 cut(s) | 229, 593, 1051, 1564, 1980, 2183 |
| BmcAI | AGTACT | 1 cut(s) | 2079 |
| Bme18I | GGWCC | 2 cut(s) | 1858, 2526 |
| BmgT120I | GGNCC | 2 cut(s) | 1858, 2526 |
| BmiI | GGNNCC | 5 cut(s) | 1225, 1395, 2527, 2528, 2641 |
| BmrI | ACTGGG | 1 cut(s) | 1399 |
| BmsI | GCATC | 9 cut(s) | 160, 214, 403, 874, 1156, 1228, 1912, 2486, 2680 |
| BmuI | ACTGGG | 1 cut(s) | 1399 |
| BpmI | CTGGAG | 4 cut(s) | 171, 1380, 2022, 2287 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2337, 2379 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2400 |
| BpuEI | CTTGAG | 2 cut(s) | 1470, 2183 |
| BsaI | GGTCTC | 2 cut(s) | 74, 709 |
| BsaWI | WCCGGW | 1 cut(s) | 1275 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 386, 673, 983, 2287 |
| Bse118I | RCCGGY | 1 cut(s) | 1275 |
| Bse1I | ACTGG | 3 cut(s) | 474, 499, 1394 |
| Bse3DI | GCAATG | 1 cut(s) | 1025 |
| BseGI | GGATG | 6 cut(s) | 229, 685, 1025, 1889, 1920, 2671 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 386, 673, 983, 2287 |
| BseMI | GCAATG | 1 cut(s) | 1025 |
| BseMII | CTCAG | 4 cut(s) | 2232, 2351, 2393, 2414 |
| BseNI | ACTGG | 3 cut(s) | 474, 499, 1394 |
| BseRI | GAGGAG | 1 cut(s) | 2036 |
| BseXI | GCAGC | 3 cut(s) | 578, 1549, 1990 |
| BsgI | GTGCAG | 1 cut(s) | 1997 |
| BshFI | GGCC | 1 cut(s) | 1095 |
| BshTI | ACCGGT | 1 cut(s) | 1275 |
| BsiHKAI | GWGCWC | 5 cut(s) | 587, 2311, 2380, 2401, 2578 |
| BsiSI | CCGG | 1 cut(s) | 1276 |
| BslFI | GGGAC | 4 cut(s) | 2436, 2499, 2539, 2621 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 386, 673, 983, 2287 |
| BsmAI | GTCTC | 6 cut(s) | 41, 74, 395, 709, 1034, 2040 |
| BsmFI | GGGAC | 4 cut(s) | 2436, 2499, 2539, 2621 |
| BsmI | GAATGC | 1 cut(s) | 2494 |
| BsnI | GGCC | 1 cut(s) | 1095 |
| Bso31I | GGTCTC | 2 cut(s) | 74, 709 |
| Bsp1286I | GDGCHC | 6 cut(s) | 587, 1396, 2311, 2380, 2401, 2578 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2400 |
| BspACI | CCGC | 7 cut(s) | 228, 255, 1049, 1069, 1981, 2181, 2184 |
| BspANI | GGCC | 1 cut(s) | 1095 |
| BspCNI | CTCAG | 4 cut(s) | 2233, 2350, 2392, 2413 |
| BspHI | TCATGA | 1 cut(s) | 1210 |
| BspLI | GGNNCC | 5 cut(s) | 1225, 1395, 2527, 2528, 2641 |
| BspMAI | CTGCAG | 2 cut(s) | 753, 2638 |
| BspMI | ACCTGC | 1 cut(s) | 727 |
| BspPI | GGATC | 3 cut(s) | 168, 2634, 2647 |
| BspQI | GCTCTTC | 1 cut(s) | 245 |
| BspTNI | GGTCTC | 2 cut(s) | 74, 709 |
| BsrBI | CCGCTC | 1 cut(s) | 255 |
| BsrDI | GCAATG | 1 cut(s) | 1025 |
| BsrFI | RCCGGY | 1 cut(s) | 1275 |
| BsrI | ACTGG | 3 cut(s) | 474, 499, 1394 |
| BssAI | RCCGGY | 1 cut(s) | 1275 |
| BssSI | CACGAG | 1 cut(s) | 276 |
| Bst2BI | CACGAG | 1 cut(s) | 276 |
| Bst6I | CTCTTC | 2 cut(s) | 92, 245 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 591, 728, 1562, 2347, 2410 |
| BstC8I | GCNNGC | 6 cut(s) | 442, 519, 550, 601, 605, 1171 |
| BstDEI | CTNAG | 7 cut(s) | 405, 1337, 2193, 2241, 2337, 2379, 2400 |
| BstF5I | GGATG | 6 cut(s) | 229, 685, 1025, 1889, 1920, 2671 |
| BstH2I | RGCGCY | 2 cut(s) | 484, 1912 |
| BstHHI | GCGC | 2 cut(s) | 483, 1911 |
| BstMAI | GTCTC | 6 cut(s) | 41, 74, 395, 709, 1034, 2040 |
| BstNSI | RCATGY | 5 cut(s) | 110, 525, 1173, 1196, 1850 |
| BstSFI | CTRYAG | 7 cut(s) | 427, 749, 1044, 1146, 1840, 1969, 2634 |
| BstV1I | GCAGC | 3 cut(s) | 578, 1549, 1990 |
| BstX2I | RGATCY | 3 cut(s) | 10, 2620, 2639 |
| BstYI | RGATCY | 3 cut(s) | 10, 2620, 2639 |
| BsuRI | GGCC | 1 cut(s) | 1095 |
| BtsCI | GGATG | 6 cut(s) | 229, 685, 1025, 1889, 1920, 2671 |
| BtsIMutI | CAGTG | 1 cut(s) | 1938 |
| BveI | ACCTGC | 1 cut(s) | 727 |
| Cac8I | GCNNGC | 6 cut(s) | 442, 519, 550, 601, 605, 1171 |
| CaiI | CAGNNNCTG | 1 cut(s) | 915 |
| CciI | TCATGA | 1 cut(s) | 1210 |
| CfoI | GCGC | 2 cut(s) | 483, 1911 |
| Cfr10I | RCCGGY | 1 cut(s) | 1275 |
| Cfr13I | GGNCC | 2 cut(s) | 1858, 2526 |
| Csp6I | GTAC | 7 cut(s) | 1006, 1477, 1519, 1543, 2078, 2253, 2661 |
| CspAI | ACCGGT | 1 cut(s) | 1275 |
| CviQI | GTAC | 7 cut(s) | 1006, 1477, 1519, 1543, 2078, 2253, 2661 |
| DdeI | CTNAG | 7 cut(s) | 405, 1337, 2193, 2241, 2337, 2379, 2400 |
| EaeI | YGGCCR | 1 cut(s) | 1093 |
| Eam1104I | CTCTTC | 2 cut(s) | 92, 245 |
| EarI | CTCTTC | 2 cut(s) | 92, 245 |
| EciI | GGCGGA | 1 cut(s) | 2199 |
| Eco24I | GRGCYC | 1 cut(s) | 1396 |
| Eco31I | GGTCTC | 2 cut(s) | 74, 709 |
| Eco32I | GATATC | 1 cut(s) | 533 |
| Eco47I | GGWCC | 2 cut(s) | 1858, 2526 |
| Eco47III | AGCGCT | 1 cut(s) | 1910 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2526 |
| EcoRV | GATATC | 1 cut(s) | 533 |
| EcoT22I | ATGCAT | 1 cut(s) | 1171 |
| EcoT38I | GRGCYC | 1 cut(s) | 1396 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1444, 1476, 2343, 2375 |
| FaqI | GGGAC | 4 cut(s) | 2436, 2499, 2539, 2621 |
| FauNDI | CATATG | 1 cut(s) | 1866 |
| FbaI | TGATCA | 1 cut(s) | 1120 |
| FblI | GTMKAC | 1 cut(s) | 1843 |
| Fnu4HI | GCNGC | 6 cut(s) | 228, 592, 1050, 1563, 1979, 2182 |
| FokI | GGATG | 6 cut(s) | 236, 692, 1032, 1876, 1927, 2658 |
| FriOI | GRGCYC | 1 cut(s) | 1396 |
| Fsp4HI | GCNGC | 6 cut(s) | 228, 592, 1050, 1563, 1979, 2182 |
| FspBI | CTAG | 3 cut(s) | 51, 528, 1203 |
| GlaI | GCGC | 2 cut(s) | 482, 1910 |
| GluI | GCNGC | 6 cut(s) | 228, 592, 1050, 1563, 1979, 2182 |
| GsuI | CTGGAG | 4 cut(s) | 171, 1380, 2022, 2287 |
| HaeII | RGCGCY | 2 cut(s) | 484, 1912 |
| HaeIII | GGCC | 1 cut(s) | 1095 |
| HapII | CCGG | 1 cut(s) | 1276 |
| HhaI | GCGC | 2 cut(s) | 483, 1911 |
| Hin6I | GCGC | 2 cut(s) | 481, 1909 |
| HinP1I | GCGC | 2 cut(s) | 481, 1909 |
| HincII | GTYRAC | 3 cut(s) | 1434, 1629, 2101 |
| HindII | GTYRAC | 3 cut(s) | 1434, 1629, 2101 |
| HindIII | AAGCTT | 1 cut(s) | 515 |
| HinfI | GANTC | 9 cut(s) | 459, 570, 817, 1207, 1412, 1685, 1884, 2173, 2432 |
| HpaII | CCGG | 1 cut(s) | 1276 |
| HphI | GGTGA | 4 cut(s) | 269, 1599, 1679, 2030 |
| Hpy166II | GTNNAC | 7 cut(s) | 331, 756, 1434, 1629, 1844, 2101, 2255 |
| Hpy188I | TCNGA | 6 cut(s) | 307, 738, 1383, 1736, 2125, 2573 |
| Hpy8I | GTNNAC | 7 cut(s) | 331, 756, 1434, 1629, 1844, 2101, 2255 |
| HpyAV | CCTTC | 6 cut(s) | 649, 736, 1132, 1700, 1871, 2162 |
| HpyCH4IV | ACGT | 1 cut(s) | 2331 |
| HpyF3I | CTNAG | 7 cut(s) | 405, 1337, 2193, 2241, 2337, 2379, 2400 |
| HpySE526I | ACGT | 1 cut(s) | 2331 |
| HspAI | GCGC | 2 cut(s) | 481, 1909 |
| KflI | GGGWCCC | 1 cut(s) | 2526 |
| Ksp22I | TGATCA | 1 cut(s) | 1120 |
| LguI | GCTCTTC | 1 cut(s) | 245 |
| LmnI | GCTCC | 4 cut(s) | 658, 1105, 1399, 1513 |
| Lsp1109I | GCAGC | 3 cut(s) | 578, 1549, 1990 |
| LweI | GCATC | 9 cut(s) | 160, 214, 403, 874, 1156, 1228, 1912, 2486, 2680 |
| MaeI | CTAG | 3 cut(s) | 51, 528, 1203 |
| MaeII | ACGT | 1 cut(s) | 2331 |
| MaeIII | GTNAC | 4 cut(s) | 460, 2327, 2456, 2499 |
| MbiI | CCGCTC | 1 cut(s) | 255 |
| MflI | RGATCY | 3 cut(s) | 10, 2620, 2639 |
| MhlI | GDGCHC | 6 cut(s) | 587, 1396, 2311, 2380, 2401, 2578 |
| MlsI | TGGCCA | 1 cut(s) | 1095 |
| MluNI | TGGCCA | 1 cut(s) | 1095 |
| MlyI | GAGTC | 2 cut(s) | 468, 2441 |
| MmeI | TCCRAC | 4 cut(s) | 36, 598, 964, 2409 |
| Mox20I | TGGCCA | 1 cut(s) | 1095 |
| Mph1103I | ATGCAT | 1 cut(s) | 1171 |
| MscI | TGGCCA | 1 cut(s) | 1095 |
| MslI | CAYNNNNRTG | 2 cut(s) | 666, 1215 |
| Msp20I | TGGCCA | 1 cut(s) | 1095 |
| MspA1I | CMGCKG | 5 cut(s) | 1049, 1424, 1981, 2181, 2582 |
| MspI | CCGG | 1 cut(s) | 1276 |
| Mva1269I | GAATGC | 1 cut(s) | 2494 |
| NdeI | CATATG | 1 cut(s) | 1866 |
| NlaIV | GGNNCC | 5 cut(s) | 1225, 1395, 2527, 2528, 2641 |
| NmuCI | GTSAC | 2 cut(s) | 460, 2327 |
| NsiI | ATGCAT | 1 cut(s) | 1171 |
| NspI | RCATGY | 5 cut(s) | 110, 525, 1173, 1196, 1850 |
| PaeI | GCATGC | 1 cut(s) | 1173 |
| PagI | TCATGA | 1 cut(s) | 1210 |
| PciSI | GCTCTTC | 1 cut(s) | 245 |
| PctI | GAATGC | 1 cut(s) | 2494 |
| PfeI | GAWTC | 7 cut(s) | 570, 817, 1207, 1412, 1685, 1884, 2173 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 673, 2287 |
| PinAI | ACCGGT | 1 cut(s) | 1275 |
| PkrI | GCNGC | 6 cut(s) | 229, 593, 1051, 1564, 1980, 2183 |
| PleI | GAGTC | 2 cut(s) | 467, 2440 |
| PpsI | GAGTC | 2 cut(s) | 467, 2440 |
| PpuMI | RGGWCCY | 1 cut(s) | 2526 |
| PshBI | ATTAAT | 1 cut(s) | 690 |
| PsiI | TTATAA | 1 cut(s) | 906 |
| Psp5II | RGGWCCY | 1 cut(s) | 2526 |
| PspN4I | GGNNCC | 5 cut(s) | 1225, 1395, 2527, 2528, 2641 |
| PspPI | GGNCC | 2 cut(s) | 1858, 2526 |
| PspPPI | RGGWCCY | 1 cut(s) | 2526 |
| PstI | CTGCAG | 2 cut(s) | 753, 2638 |
| PstNI | CAGNNNCTG | 1 cut(s) | 915 |
| PsuI | RGATCY | 3 cut(s) | 10, 2620, 2639 |
| PvuII | CAGCTG | 2 cut(s) | 1424, 2582 |
| RsaI | GTAC | 7 cut(s) | 1007, 1478, 1520, 1544, 2079, 2254, 2662 |
| RsaNI | GTAC | 7 cut(s) | 1006, 1477, 1519, 1543, 2078, 2253, 2661 |
| RseI | CAYNNNNRTG | 2 cut(s) | 666, 1215 |
| SapI | GCTCTTC | 1 cut(s) | 245 |
| SatI | GCNGC | 6 cut(s) | 228, 592, 1050, 1563, 1979, 2182 |
| Sau96I | GGNCC | 2 cut(s) | 1858, 2526 |
| ScaI | AGTACT | 1 cut(s) | 2079 |
| SchI | GAGTC | 2 cut(s) | 468, 2441 |
| SduI | GDGCHC | 6 cut(s) | 587, 1396, 2311, 2380, 2401, 2578 |
| SfaNI | GCATC | 9 cut(s) | 160, 214, 403, 874, 1156, 1228, 1912, 2486, 2680 |
| SfcI | CTRYAG | 7 cut(s) | 427, 749, 1044, 1146, 1840, 1969, 2634 |
| SinI | GGWCC | 2 cut(s) | 1858, 2526 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 666, 1215 |
| SmlI | CTYRAG | 2 cut(s) | 1485, 2162 |
| SmoI | CTYRAG | 2 cut(s) | 1485, 2162 |
| SphI | GCATGC | 1 cut(s) | 1173 |
| SsiI | CCGC | 7 cut(s) | 228, 255, 1049, 1069, 1981, 2181, 2184 |
| SspI | AATATT | 4 cut(s) | 73, 1245, 1650, 1731 |
| SspMI | CTAG | 3 cut(s) | 51, 528, 1203 |
| TaiI | ACGT | 1 cut(s) | 2334 |
| TaqI | TCGA | 3 cut(s) | 284, 535, 565 |
| TatI | WGTACW | 4 cut(s) | 1005, 1518, 2077, 2660 |
| TauI | GCSGC | 3 cut(s) | 230, 1052, 2184 |
| TfiI | GAWTC | 7 cut(s) | 570, 817, 1207, 1412, 1685, 1884, 2173 |
| TscAI | CASTG | 1 cut(s) | 1945 |
| TseFI | GTSAC | 2 cut(s) | 460, 2327 |
| TseI | GCWGC | 3 cut(s) | 591, 1562, 1978 |
| Tsp45I | GTSAC | 2 cut(s) | 460, 2327 |
| TspRI | CASTG | 1 cut(s) | 1945 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 673, 2287 |
| VpaK11BI | GGWCC | 2 cut(s) | 1858, 2526 |
| VspI | ATTAAT | 1 cut(s) | 690 |
| XapI | RAATTY | 4 cut(s) | 500, 963, 1658, 1762 |
| XbaI | TCTAGA | 1 cut(s) | 527 |
| XceI | RCATGY | 5 cut(s) | 110, 525, 1173, 1196, 1850 |
| XmiI | GTMKAC | 1 cut(s) | 1843 |
| XspI | CTAG | 3 cut(s) | 51, 528, 1203 |
| ZrmI | AGTACT | 1 cut(s) | 2079 |
| Zsp2I | ATGCAT | 1 cut(s) | 1171 |