Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001446

Physical Location & Seq

Genomic Coordinates Forward (+)

16271375 .. 16275447

Gene Structure 4073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00094930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGAGATAGATCTTGAACTGCCCTCATGTGAGCAGGGCAAGTTAGAGACTAGGTTGGATAAAGATGTTAATATTGTGGAGATAAATGTTGAGAAGAAGAGTGAGCATGTTAAAGAAGCTCATGGATTGAGAGCAAACGAGAGTGTTTCCGGAGTTGAGGATCAAGAGGATGCGAACAATGTTGAAGTTAGAGTAGTTGATAAGGGGGTTGTTAATACTGTGGATGCCGCACATGAGATGAATGTTGAGAAGAGCATTGAGCCTGTTGGGGAAGCTTGTGGGTCGAGTGCAAACAAAAGTGCTTCTGATTTTCAGGGGCAAGATGATGTGAACAATGTTGTGGCGAATGTAGTTGATAAGGGGTTTGTTGTTCGTGAGCCTGAAAATGGTTTGGAGTTTGAGACTAAGGAAGATGCTTATTCCTACTACAGAGAATATGCTCGGTCGGTGGGGTTTGGAGTCACAATTATAGCCAGTAGGCGCTCTAAAAAAACTGGAAAATTCATTGACATAAAGCTTGCATGTTCTAGATATCGAAAGCAGGAAGCTGGCGATACAGAAAATCGAAGAATCCAACTATTGAGCACAGGCTGCAAAGCTGGCTTGCAAATGAAGAAGCGAGAGAATGAAAAATGGTATATACATAGTTTTGTGAAGGAGCATAACCATGAGATGGGGGTTGGTTTTATTAATGCTTTAGGGGGAAGAAACAAGAGACCTGCAACTGTTGCTTGTCAGAAGAAGGGTCTGCAGTTCACTTTAGATAAGGAAGATGTCCAAGTAATGTTTGAACAGTTGATGTGTATGCAGGACGAGAATCCCAACTTCTTCTATGCCATAGAGTTTGACAATGACAAACGATTGAGAAGTGTGTTTTGGGTTGACGCAAACGGTAGGCGTGATTATAACAGTTTCTGTGATGTAGTCTTGTTTGATACTTATTATGTTAGAAACAACTATAAAATTCCTTTAGTTCCTATTGTTGGAGTTAATCATCACTTTCAGTACATTTTACTTGGATGTGCATTGATTGGAGATGAGACTACGGCGGCTTTTGTTTGGTTAATGCGGACATGGCTAAAAGCTGTGGGTGGCCAAGCTCCAAGAGTGGTTATTACTGATCAAGAGAAATACTTGAAGGAAGCTGTAGCAGATGTATTTACTGATGCATGCCATCGTTTTTGTTTATGGCATGTATTGACTAGGATTCATGACAATGTGGGTTCCATAAATGAAGATGCAATATTTCAGGCAAAATTGAACAAATGGATTTACCGGTCTTGGACTGTTCAACAATTTGAACAGAGATGGTGGAAATTGATTAACAGATTTGAACTAAGGGAAAATGAACGCCTTTGCTTATTCTCATTGTATGAAGATCGGAAATACTGGGCTCCAACTTATATGCAGGATTCGTGTTCAGCTGGAATGTCAACAGTTGAACGATCTGGAAGTATAACTTCATTTTTTGATAGGTACATATCTCAAGAAGCTATGGTTAAGGATTTTATGGAGCAGTACAAAATATTTTTGAAAGATAGGTACGACATGGAAGCAAATGCTGCTTTTGAAGCACAGAATAAACAACCTGAATTAAGATCACTCTCACCTTTTGAGAAACAAATGTCAACTATATATACGGATACAATATTTAGAAAATTTCAAGGCGAGGTTTTGGGAGTAGATTCTTGTCACTTGCAGAAGGAAGGCCAAGATGAAGCAACTGTAATATTCCGAGTTGATGACTTGGAAGAACGGCAGAATTTCATTGTAGCATGGAATGAACCAGAATTAAGAGTATGCTGTTTATGTCATTCATTTGAATACAAAGGTTTTCTCTGTAGACATGCACTTCTGGTCCTTCATATGTCTGGTGTTTCCAGAATCCCATCCCATTACATTTTGAAGCGCTGGATGAAAGATGCAAGAGTTAGGCACACTGTTAGTGATGTGTCAAAGAGGCTTAACTACAGGGTGCAGCGGTTCAATGATCTGTGTAAATTAGCCGTTAAATTGGGTGAGGAGGGGTCTTTGTCTCCAGAAACTTACCAGATTGCATTTCAAGCATTAGACGAAGTACTGAAACAATGTGCCAATGTCAACAATTCTGTAAGGGGGTTTCAGAACCCAATGCATCATCTATTCATGGGTCAAATGATCTTGAGGAAGGGAATCACAGCGGCGGAATGGCTAAGTTGTCTAAGAAAAAGAAAACCCACAGAAAAAGAAAGGGGCAAACTGAGCCAGATGGTATACCTATCAGGTTGCAAGATAGCTACCAGCAGATGGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

764

Amino Acids

88.42

Weight (kDa)

6.84

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	141 - 225	2.6e-20	FAR1 DNA-binding domain
MULE	PF10551	308 - 400	2.6e-24	MULE transposase domain
Transposase_mut	PF00872	328 - 443	9.3e-06	Transposase, Mutator family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32250 AT2G32250 AT2G32250 AT2G32250 AT2G32250 AT2G32250 AT2G32250 AT2G32250
fragaria_vesca	FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511 FvH4_6g39511
malus_domestica	MD17G1129100.v1.1
prunus_persica	Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1 Prupe.3G186000_v2.0.a1
pyrus_communis	pycom17g12130
rosa_chinensis	RchiOBHm_Chr2g0153551
rosa_laevigata	RLG00000020709
rosa_multiflora	Rmu_sc0003976.1_g000006
rosa_roxburghii	Rroxscaffold_2G00094930
rosa_rugosa	Rorug02G0439500 Rorug02G0439600 Rorug02G0439700 Rorug02G0439800
rosa_samantha	Rh2AG503200 Rh2BG513900 Rh2CG489000 Rh2DG525600
rosa_wichuraiana	Rw2G041310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	906
Acc36I	ACCTGC	1 cut(s)	727
AccB7I	CCANNNNNTGG	2 cut(s)	673, 2286
AccI	GTMKAC	2 cut(s)	1843, 2253
AccIII	TCCGGA	1 cut(s)	149
AciI	CCGC	6 cut(s)	228, 1049, 1069, 1981, 2180, 2183
AclWI	GGATC	1 cut(s)	168
AcoI	YGGCCR	1 cut(s)	1093
AcsI	RAATTY	4 cut(s)	500, 963, 1658, 1762
AfaI	GTAC	5 cut(s)	1007, 1478, 1520, 1544, 2079
AfeI	AGCGCT	1 cut(s)	1910
AfiI	CCNNNNNNNGG	4 cut(s)	386, 673, 983, 2286
AgeI	ACCGGT	1 cut(s)	1275
AjuI	GAANNNNNNNTTGG	2 cut(s)	859, 891
Alw21I	GWGCWC	1 cut(s)	587
Alw26I	GTCTC	5 cut(s)	41, 395, 709, 1034, 2040
AlwI	GGATC	1 cut(s)	168
AlwNI	CAGNNNCTG	1 cut(s)	915
Aor13HI	TCCGGA	1 cut(s)	149
Aor51HI	AGCGCT	1 cut(s)	1910
AoxI	GGCC	2 cut(s)	1093, 1708
ApeKI	GCWGC	3 cut(s)	591, 1562, 1978
ApoI	RAATTY	4 cut(s)	500, 963, 1658, 1762
AseI	ATTAAT	1 cut(s)	690
AsiGI	ACCGGT	1 cut(s)	1275
AspLEI	GCGC	2 cut(s)	483, 1911
AspS9I	GGNCC	1 cut(s)	1858
AsuHPI	GGTGA	2 cut(s)	1599, 2030
AvaII	GGWCC	1 cut(s)	1858
BalI	TGGCCA	1 cut(s)	1095
BanII	GRGCYC	1 cut(s)	1396
Bbv12I	GWGCWC	1 cut(s)	587
BbvI	GCAGC	3 cut(s)	578, 1549, 1990
BccI	CCATC	6 cut(s)	667, 1182, 1302, 1897, 2242, 2280
BceAI	ACGGC	3 cut(s)	1062, 1772, 1991
BciVI	GTATCC	1 cut(s)	1636
BclI	TGATCA	1 cut(s)	1120
BcoDI	GTCTC	5 cut(s)	41, 395, 709, 1034, 2040
BfaI	CTAG	3 cut(s)	51, 528, 1203
BfmI	CTRYAG	5 cut(s)	427, 749, 1146, 1840, 1969
BfoI	RGCGCY	2 cut(s)	484, 1912
BfuAI	ACCTGC	1 cut(s)	727
BfuI	GTATCC	1 cut(s)	1636
BglII	AGATCT	1 cut(s)	10
BisI	GCNGC	6 cut(s)	228, 592, 1050, 1563, 1979, 2181
BlsI	GCNGC	6 cut(s)	229, 593, 1051, 1564, 1980, 2182
BmcAI	AGTACT	1 cut(s)	2079
Bme18I	GGWCC	1 cut(s)	1858
BmgT120I	GGNCC	1 cut(s)	1858
BmiI	GGNNCC	2 cut(s)	1225, 1395
BmrI	ACTGGG	1 cut(s)	1399
BmsI	GCATC	7 cut(s)	160, 214, 403, 1156, 1228, 1912, 2143
BmuI	ACTGGG	1 cut(s)	1399
BpmI	CTGGAG	1 cut(s)	2022
BpuEI	CTTGAG	2 cut(s)	1470, 2182
BsaI	GGTCTC	1 cut(s)	709
BsaWI	WCCGGW	2 cut(s)	149, 1275
Bsc4I	CCNNNNNNNGG	4 cut(s)	386, 673, 983, 2286
Bse118I	RCCGGY	1 cut(s)	1275
Bse1I	ACTGG	3 cut(s)	474, 499, 1394
BseAI	TCCGGA	1 cut(s)	149
BseGI	GGATG	5 cut(s)	175, 229, 1025, 1889, 1920
BseLI	CCNNNNNNNGG	4 cut(s)	386, 673, 983, 2286
BseMII	CTCAG	1 cut(s)	2231
BseNI	ACTGG	3 cut(s)	474, 499, 1394
BseRI	GAGGAG	1 cut(s)	2036
BseXI	GCAGC	3 cut(s)	578, 1549, 1990
BsgI	GTGCAG	1 cut(s)	1997
Bsh1285I	CGRYCG	1 cut(s)	446
BshFI	GGCC	2 cut(s)	1095, 1710
BshTI	ACCGGT	1 cut(s)	1275
BsiEI	CGRYCG	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	587
BsiSI	CCGG	2 cut(s)	150, 1276
BslI	CCNNNNNNNGG	4 cut(s)	386, 673, 983, 2286
BsmAI	GTCTC	5 cut(s)	41, 395, 709, 1034, 2040
BsnI	GGCC	2 cut(s)	1095, 1710
Bso31I	GGTCTC	1 cut(s)	709
Bsp1286I	GDGCHC	2 cut(s)	587, 1396
Bsp13I	TCCGGA	1 cut(s)	149
Bsp143I	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
BspACI	CCGC	6 cut(s)	228, 1049, 1069, 1981, 2180, 2183
BspANI	GGCC	2 cut(s)	1095, 1710
BspCNI	CTCAG	1 cut(s)	2232
BspEI	TCCGGA	1 cut(s)	149
BspHI	TCATGA	1 cut(s)	1210
BspLI	GGNNCC	2 cut(s)	1225, 1395
BspMAI	CTGCAG	1 cut(s)	753
BspMI	ACCTGC	1 cut(s)	727
BspPI	GGATC	1 cut(s)	168
BspQI	GCTCTTC	1 cut(s)	245
BspTNI	GGTCTC	1 cut(s)	709
BsrFI	RCCGGY	1 cut(s)	1275
BsrI	ACTGG	3 cut(s)	474, 499, 1394
BssAI	RCCGGY	1 cut(s)	1275
BssMI	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
BssNAI	GTATAC	1 cut(s)	2254
Bst1107I	GTATAC	1 cut(s)	2254
Bst4CI	ACNGT	9 cut(s)	220, 727, 795, 893, 911, 1288, 1438, 1726, 1942
Bst6I	CTCTTC	2 cut(s)	92, 245
BstAPI	GCANNNNNTGC	3 cut(s)	591, 728, 1562
BstC8I	GCNNGC	5 cut(s)	519, 550, 601, 605, 1171
BstDEI	CTNAG	5 cut(s)	405, 1337, 2192, 2201, 2240
BstF5I	GGATG	5 cut(s)	175, 229, 1025, 1889, 1920
BstH2I	RGCGCY	2 cut(s)	484, 1912
BstHHI	GCGC	2 cut(s)	483, 1911
BstKTI	GATC	8 cut(s)	13, 163, 1123, 1381, 1448, 1601, 1993, 2160
BstMAI	GTCTC	5 cut(s)	41, 395, 709, 1034, 2040
BstMBI	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
BstMCI	CGRYCG	1 cut(s)	446
BstMWI	GCNNNNNNNGC	8 cut(s)	591, 600, 728, 1075, 1562, 1571, 2063, 2241
BstNSI	RCATGY	5 cut(s)	110, 525, 1173, 1196, 1850
BstSFI	CTRYAG	5 cut(s)	427, 749, 1146, 1840, 1969
BstV1I	GCAGC	3 cut(s)	578, 1549, 1990
BstX2I	RGATCY	1 cut(s)	10
BstYI	RGATCY	1 cut(s)	10
BstZ17I	GTATAC	1 cut(s)	2254
BsuI	GTATCC	1 cut(s)	1636
BsuRI	GGCC	2 cut(s)	1095, 1710
BtsCI	GGATG	5 cut(s)	175, 229, 1025, 1889, 1920
BtsIMutI	CAGTG	1 cut(s)	1938
BveI	ACCTGC	1 cut(s)	727
Cac8I	GCNNGC	5 cut(s)	519, 550, 601, 605, 1171
CaiI	CAGNNNCTG	1 cut(s)	915
CciI	TCATGA	1 cut(s)	1210
CfoI	GCGC	2 cut(s)	483, 1911
Cfr10I	RCCGGY	1 cut(s)	1275
Cfr13I	GGNCC	1 cut(s)	1858
CseI	GACGC	1 cut(s)	893
Csp6I	GTAC	5 cut(s)	1006, 1477, 1519, 1543, 2078
CspAI	ACCGGT	1 cut(s)	1275
CviQI	GTAC	5 cut(s)	1006, 1477, 1519, 1543, 2078
DdeI	CTNAG	5 cut(s)	405, 1337, 2192, 2201, 2240
DpnI	GATC	8 cut(s)	12, 162, 1122, 1380, 1447, 1600, 1992, 2159
DpnII	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
EaeI	YGGCCR	1 cut(s)	1093
Eam1104I	CTCTTC	2 cut(s)	92, 245
EarI	CTCTTC	2 cut(s)	92, 245
EciI	GGCGGA	1 cut(s)	2198
Eco24I	GRGCYC	1 cut(s)	1396
Eco31I	GGTCTC	1 cut(s)	709
Eco32I	GATATC	1 cut(s)	533
Eco47I	GGWCC	1 cut(s)	1858
Eco47III	AGCGCT	1 cut(s)	1910
EcoRV	GATATC	1 cut(s)	533
EcoT22I	ATGCAT	2 cut(s)	1171, 2136
EcoT38I	GRGCYC	1 cut(s)	1396
FalI	AAGNNNNNCTT	2 cut(s)	1444, 1476
FauNDI	CATATG	1 cut(s)	1866
FbaI	TGATCA	1 cut(s)	1120
FblI	GTMKAC	2 cut(s)	1843, 2253
Fnu4HI	GCNGC	6 cut(s)	228, 592, 1050, 1563, 1979, 2181
FokI	GGATG	5 cut(s)	182, 236, 1032, 1876, 1927
FriOI	GRGCYC	1 cut(s)	1396
Fsp4HI	GCNGC	6 cut(s)	228, 592, 1050, 1563, 1979, 2181
FspBI	CTAG	3 cut(s)	51, 528, 1203
GlaI	GCGC	2 cut(s)	482, 1910
GluI	GCNGC	6 cut(s)	228, 592, 1050, 1563, 1979, 2181
GsuI	CTGGAG	1 cut(s)	2022
HaeII	RGCGCY	2 cut(s)	484, 1912
HaeIII	GGCC	2 cut(s)	1095, 1710
HapII	CCGG	2 cut(s)	150, 1276
HgaI	GACGC	1 cut(s)	893
HhaI	GCGC	2 cut(s)	483, 1911
Hin6I	GCGC	2 cut(s)	481, 1909
HinP1I	GCGC	2 cut(s)	481, 1909
HincII	GTYRAC	4 cut(s)	883, 1434, 1629, 2101
HindII	GTYRAC	4 cut(s)	883, 1434, 1629, 2101
HindIII	AAGCTT	2 cut(s)	273, 515
HinfI	GANTC	8 cut(s)	459, 570, 817, 1207, 1412, 1685, 1884, 2172
HpaII	CCGG	2 cut(s)	150, 1276
HphI	GGTGA	2 cut(s)	1599, 2030
Hpy166II	GTNNAC	8 cut(s)	331, 756, 883, 1434, 1629, 1844, 2101, 2254
Hpy188I	TCNGA	5 cut(s)	307, 738, 1383, 1736, 2124
Hpy8I	GTNNAC	8 cut(s)	331, 756, 883, 1434, 1629, 1844, 2101, 2254
HpyAV	CCTTC	7 cut(s)	649, 736, 1132, 1696, 1700, 1871, 2161
HpyCH4III	ACNGT	9 cut(s)	220, 727, 795, 893, 911, 1288, 1438, 1726, 1942
HpyF10VI	GCNNNNNNNGC	8 cut(s)	591, 600, 728, 1075, 1562, 1571, 2063, 2241
HpyF3I	CTNAG	5 cut(s)	405, 1337, 2192, 2201, 2240
HspAI	GCGC	2 cut(s)	481, 1909
Kpn2I	TCCGGA	1 cut(s)	149
Ksp22I	TGATCA	1 cut(s)	1120
Kzo9I	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
LguI	GCTCTTC	1 cut(s)	245
LmnI	GCTCC	4 cut(s)	658, 1105, 1399, 1513
Lsp1109I	GCAGC	3 cut(s)	578, 1549, 1990
LweI	GCATC	7 cut(s)	160, 214, 403, 1156, 1228, 1912, 2143
MaeI	CTAG	3 cut(s)	51, 528, 1203
MaeIII	GTNAC	2 cut(s)	460, 1691
MalI	GATC	8 cut(s)	12, 162, 1122, 1380, 1447, 1600, 1992, 2159
MboI	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
MflI	RGATCY	1 cut(s)	10
MhlI	GDGCHC	2 cut(s)	587, 1396
MlsI	TGGCCA	1 cut(s)	1095
MluNI	TGGCCA	1 cut(s)	1095
MlyI	GAGTC	1 cut(s)	468
MmeI	TCCRAC	4 cut(s)	36, 598, 964, 1421
MnlI	CCTC	8 cut(s)	34, 151, 160, 1663, 1953, 2014, 2017, 2157
Mox20I	TGGCCA	1 cut(s)	1095
Mph1103I	ATGCAT	2 cut(s)	1171, 2136
MroI	TCCGGA	1 cut(s)	149
MscI	TGGCCA	1 cut(s)	1095
MslI	CAYNNNNRTG	2 cut(s)	666, 1215
Msp20I	TGGCCA	1 cut(s)	1095
MspA1I	CMGCKG	3 cut(s)	1424, 1981, 2180
MspI	CCGG	2 cut(s)	150, 1276
MwoI	GCNNNNNNNGC	8 cut(s)	591, 600, 728, 1075, 1562, 1571, 2063, 2241
NdeI	CATATG	1 cut(s)	1866
NdeII	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
NlaIV	GGNNCC	2 cut(s)	1225, 1395
NmuCI	GTSAC	2 cut(s)	460, 1691
NsiI	ATGCAT	2 cut(s)	1171, 2136
NspI	RCATGY	5 cut(s)	110, 525, 1173, 1196, 1850
PaeI	GCATGC	1 cut(s)	1173
PagI	TCATGA	1 cut(s)	1210
PciSI	GCTCTTC	1 cut(s)	245
PfeI	GAWTC	7 cut(s)	570, 817, 1207, 1412, 1685, 1884, 2172
PflMI	CCANNNNNTGG	2 cut(s)	673, 2286
PinAI	ACCGGT	1 cut(s)	1275
PkrI	GCNGC	6 cut(s)	229, 593, 1051, 1564, 1980, 2182
PleI	GAGTC	1 cut(s)	467
PpsI	GAGTC	1 cut(s)	467
PshBI	ATTAAT	1 cut(s)	690
PsiI	TTATAA	1 cut(s)	906
PspN4I	GGNNCC	2 cut(s)	1225, 1395
PspPI	GGNCC	1 cut(s)	1858
PstI	CTGCAG	1 cut(s)	753
PstNI	CAGNNNCTG	1 cut(s)	915
PsuI	RGATCY	1 cut(s)	10
PvuII	CAGCTG	1 cut(s)	1424
RsaI	GTAC	5 cut(s)	1007, 1478, 1520, 1544, 2079
RsaNI	GTAC	5 cut(s)	1006, 1477, 1519, 1543, 2078
RseI	CAYNNNNRTG	2 cut(s)	666, 1215
SapI	GCTCTTC	1 cut(s)	245
SatI	GCNGC	6 cut(s)	228, 592, 1050, 1563, 1979, 2181
Sau3AI	GATC	8 cut(s)	10, 160, 1120, 1378, 1445, 1598, 1990, 2157
Sau96I	GGNCC	1 cut(s)	1858
ScaI	AGTACT	1 cut(s)	2079
SchI	GAGTC	1 cut(s)	468
SduI	GDGCHC	2 cut(s)	587, 1396
SfaNI	GCATC	7 cut(s)	160, 214, 403, 1156, 1228, 1912, 2143
SfcI	CTRYAG	5 cut(s)	427, 749, 1146, 1840, 1969
SinI	GGWCC	1 cut(s)	1858
SmiMI	CAYNNNNRTG	2 cut(s)	666, 1215
SmlI	CTYRAG	2 cut(s)	1485, 2161
SmoI	CTYRAG	2 cut(s)	1485, 2161
SphI	GCATGC	1 cut(s)	1173
SsiI	CCGC	6 cut(s)	228, 1049, 1069, 1981, 2180, 2183
SspI	AATATT	5 cut(s)	73, 1245, 1527, 1650, 1731
SspMI	CTAG	3 cut(s)	51, 528, 1203
TaaI	ACNGT	9 cut(s)	220, 727, 795, 893, 911, 1288, 1438, 1726, 1942
TaqI	TCGA	3 cut(s)	284, 535, 565
TaqII	GACCGA	1 cut(s)	432
TatI	WGTACW	3 cut(s)	1005, 1518, 2077
TauI	GCSGC	3 cut(s)	230, 1052, 2183
TfiI	GAWTC	7 cut(s)	570, 817, 1207, 1412, 1685, 1884, 2172
TscAI	CASTG	1 cut(s)	1945
TseFI	GTSAC	2 cut(s)	460, 1691
TseI	GCWGC	3 cut(s)	591, 1562, 1978
Tsp45I	GTSAC	2 cut(s)	460, 1691
TspGWI	ACGGA	1 cut(s)	1655
TspRI	CASTG	1 cut(s)	1945
Van91I	CCANNNNNTGG	2 cut(s)	673, 2286
VpaK11BI	GGWCC	1 cut(s)	1858
VspI	ATTAAT	1 cut(s)	690
XapI	RAATTY	4 cut(s)	500, 963, 1658, 1762
XbaI	TCTAGA	1 cut(s)	527
XceI	RCATGY	5 cut(s)	110, 525, 1173, 1196, 1850
XmiI	GTMKAC	2 cut(s)	1843, 2253
XspI	CTAG	3 cut(s)	51, 528, 1203
ZrmI	AGTACT	1 cut(s)	2079
Zsp2I	ATGCAT	2 cut(s)	1171, 2136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.