Rmu_sc0003981.1_g000024

Belongs to the bacterial ribosomal protein bL35 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003981.1
Physical Location & Seq
Forward (+)
83124 .. 83447
324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003981.1_g000024.1.cds

Sequence Viewer

Length: 324 bp
atggcttccgcgactgtgtccatgacggtgtcgtttggtctgagatattccccattatgctcttgccgggtgggtcaagccccggttcagctccctcaactcaaccggcccgactcgttgagactcagttcctcacacaccatttctgggttcggctcgcttcttcccctcaggctctgcaccatcacttccacacctcttaggcttcgctccctcaccattgtggcacataaaggctacaaaatgaagacccacaaggtagttctctctctctctctatttttctccatgcttgttgtgaaagccttgaaatttgaagaatga

Protein Analysis

107

Amino Acids

11.75

Weight (kDa)

10.45

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013010)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 11
AciI CCGC 1 cut(s) 9
AcsI RAATTY 1 cut(s) 311
AfiI CCNNNNNNNGG 1 cut(s) 147
AgsI TTSAA 2 cut(s) 310, 317
AleI CACNNNNGTG 1 cut(s) 221
AluBI AGCT 1 cut(s) 91
AluI AGCT 1 cut(s) 91
Alw26I GTCTC 1 cut(s) 115
AlwNI CAGNNNCTG 1 cut(s) 177
AoxI GGCC 1 cut(s) 107
ApoI RAATTY 1 cut(s) 311
AspS9I GGNCC 1 cut(s) 108
AsuC2I CCSGG 2 cut(s) 68, 83
AsuHPI GGTGA 1 cut(s) 208
AxyI CCTNAGG 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 254
BccI CCATC 1 cut(s) 191
BcnI CCSGG 2 cut(s) 68, 83
BcoDI GTCTC 1 cut(s) 115
Bme1390I CCNGG 2 cut(s) 68, 83
BmgT120I GGNCC 1 cut(s) 108
BmrFI CCNGG 2 cut(s) 68, 83
BpiI GAAGAC 1 cut(s) 254
BpuMI CCSGG 2 cut(s) 68, 83
BsaJI CCNNGG 1 cut(s) 81
Bsc4I CCNNNNNNNGG 1 cut(s) 147
Bse118I RCCGGY 1 cut(s) 105
Bse21I CCTNAGG 1 cut(s) 170
BseDI CCNNGG 1 cut(s) 81
BseLI CCNNNNNNNGG 1 cut(s) 147
BseMII CTCAG 3 cut(s) 32, 139, 184
BsgI GTGCAG 1 cut(s) 163
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 1 cut(s) 109
BsiSI CCGG 3 cut(s) 67, 83, 106
BslI CCNNNNNNNGG 1 cut(s) 147
BsmAI GTCTC 1 cut(s) 115
BsnI GGCC 1 cut(s) 109
BspACI CCGC 1 cut(s) 9
BspANI GGCC 1 cut(s) 109
BspCNI CTCAG 3 cut(s) 33, 138, 183
BspFNI CGCG 1 cut(s) 11
BsrFI RCCGGY 1 cut(s) 105
BssAI RCCGGY 1 cut(s) 105
BssECI CCNNGG 1 cut(s) 81
Bst4CI ACNGT 2 cut(s) 16, 28
BstC8I GCNNGC 1 cut(s) 158
BstDEI CTNAG 4 cut(s) 41, 125, 170, 200
BstFNI CGCG 1 cut(s) 11
BstMAI GTCTC 1 cut(s) 115
BstSCI CCNGG 2 cut(s) 66, 81
BstUI CGCG 1 cut(s) 11
BstV2I GAAGAC 1 cut(s) 254
Bsu36I CCTNAGG 1 cut(s) 170
BsuRI GGCC 1 cut(s) 109
Cac8I GCNNGC 1 cut(s) 158
CaiI CAGNNNCTG 1 cut(s) 177
Cfr10I RCCGGY 1 cut(s) 105
Cfr13I GGNCC 1 cut(s) 108
CviAII CATG 2 cut(s) 22, 289
CviJI RGCY 9 cut(s) 5, 80, 91, 109, 156, 175, 205, 237, 305
CviKI_1 RGCY 9 cut(s) 5, 80, 91, 109, 156, 175, 205, 237, 305
DdeI CTNAG 4 cut(s) 41, 125, 170, 200
Eco81I CCTNAGG 1 cut(s) 170
FaeI CATG 2 cut(s) 25, 292
FaiI YATR 4 cut(s) 23, 58, 231, 290
FatI CATG 2 cut(s) 21, 288
HaeIII GGCC 1 cut(s) 109
HapII CCGG 3 cut(s) 67, 83, 106
Hin1II CATG 2 cut(s) 25, 292
HinfI GANTC 2 cut(s) 113, 123
HpaII CCGG 3 cut(s) 67, 83, 106
HphI GGTGA 1 cut(s) 208
Hpy188I TCNGA 1 cut(s) 42
HpyCH4III ACNGT 2 cut(s) 16, 28
HpyCH4V TGCA 1 cut(s) 180
HpyF3I CTNAG 4 cut(s) 41, 125, 170, 200
Hsp92II CATG 2 cut(s) 25, 292
LmnI GCTCC 2 cut(s) 96, 215
LpnPI CCDG 5 cut(s) 80, 96, 119, 132, 157
MboII GAAGA 2 cut(s) 155, 259
MluCI AATT 1 cut(s) 311
MlyI GAGTC 2 cut(s) 107, 117
MnlI CCTC 5 cut(s) 105, 142, 179, 207, 224
MslI CAYNNNNRTG 2 cut(s) 26, 221
MspI CCGG 3 cut(s) 67, 83, 106
MspR9I CCNGG 2 cut(s) 68, 83
MvnI CGCG 1 cut(s) 11
NciI CCSGG 2 cut(s) 68, 83
NlaIII CATG 2 cut(s) 25, 292
OliI CACNNNNGTG 1 cut(s) 221
PflFI GACNNNGTC 2 cut(s) 16, 28
PleI GAGTC 2 cut(s) 107, 117
PpsI GAGTC 2 cut(s) 107, 117
PspPI GGNCC 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 177
PsyI GACNNNGTC 2 cut(s) 16, 28
RseI CAYNNNNRTG 2 cut(s) 26, 221
Sau96I GGNCC 1 cut(s) 108
SchI GAGTC 2 cut(s) 107, 117
ScrFI CCNGG 2 cut(s) 68, 83
SetI ASST 3 cut(s) 93, 199, 261
SmiMI CAYNNNNRTG 2 cut(s) 26, 221
Sse9I AATT 1 cut(s) 311
SsiI CCGC 1 cut(s) 9
StyD4I CCNGG 2 cut(s) 66, 81
TaaI ACNGT 2 cut(s) 16, 28
TasI AATT 1 cut(s) 311
TspDTI ATGAA 1 cut(s) 260
Tth111I GACNNNGTC 2 cut(s) 16, 28
XapI RAATTY 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.