Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004373.1

Orthogroup ID

OG0009809

Physical Location & Seq

Genomic Coordinates Reverse (-)

103163 .. 106089

Gene Structure 2927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ctgggctggtcttcgatcttgatccccaggtcaaaattaagttgccttgacatggcttcatatacgcccaaaaacatcctcataactggggcagctggcttcattgcttcccatgtcgccaaccggctcgttcgcagtcaccctgaatacaatattgttgtgcttgacaagcttgactattgttcgaacctgaaaaacctccttccctctaagtcgtcacccaatttcaagtttgttaagggggacataggaagtgccgaccttgtcaactatctcctcatcactgagtcgatagatacaataatgcattttgcagcccagacccatgtcgacaactcctttggcaacagcttcgagttcacaaagaacaacatctatggcacccatgttcttctagaagcatgtaaagtcactggccaaatcaggaggttcatccatgttagcacagatgaggtttatggtgagactgatgaagatgctgttgtaggaaaccatgaggcatctcaactcctcccaacaaatccatactctgcaacaaaagctggagcagaaatgcttgttatggcatatggcaggtcttatgggttgcctgttataacgacccgcggaaacaatgtttatggaccaaatcaatttcctgaaaaattgattccaaagttcattctcttggctatgcaagggaaacctcttcccattcatggggatggtgctaatgtgaggagctacttatactgcgaggatgttgccgaggcttttgaactcattcttcacaaaggagaggttggccatgtgtacaatattgggacaaagaaggaaaggagagttattgatgtggccagagatatatgcagacttttcaatgtggactcggaagcatgcatcaagtttgttgaaaacagacctttcaatgaccagaggtacttccttgatgatcagaagttgacggtgttggggtggtcagagcggactacctgggaagaggggctgaagaagactatagaatggtacactaagaatcctaactggtggggtgatgtatctggggcactgcttcctcatccacgaatgttgatgatgcctggtggaattgagagacattttgatgagcctgaagaggaaaaatctgagtcttatgtctcaagtaatcctcgaatgttggttcccccttccaaatgctgtggctctcctcgtaaacctccttataagttcttgatctatggtaagactgggtggattggtggtgtacttgggaagctctgtgaaaaacaagggattccttatgaatatggaaaagggcgtcttgaggatcggtcttcacttgctgcagatattcagaatattaagccaactcatgtgtttaatgctgctggtgtgactggtagacctaatgttgattggtgtgaatctcataaagcagaaacaattcgagccaatgttgctggaaccctaaccctagcagatgtttgcagagagcatgggctccttatcgtaaattttgcaactgggtgtatatttgagtatgatgctaaacatccagagggttcagggattgggttcactgaagaagacaaacccaatttctttggttctttctattcaaaaaccaaggccatggttgaggagctattgaatgaattcgacaatgtttgcactcttagagttcgaatgcccatctcatcagacctgaacaacccgcgtaacttcatcaccaagatttctcgttataacaaagtggtcaacattcctaacagcatgaccatcttggatgaactactacctatttcaatcgagatggcaaagcggaacttgaggggtatctggaacttcacaaatcctggggtcgtgagccataatgagattctggaaatgtacaagcaatacattgacccaagtttcaaatgggcgaacttcacaattgaagagcaagccaaggttatagttgccgcccgaagcaacaatgaaatggatgcatccaagttgaagaaagagttccccgagttgctaccaatcaaggagtcgctgataaagtatgtctttgaaccaaacaagaaaagttctgcaaattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009506 GO:0009812 GO:0009813 GO:0009914 GO:0009966 GO:0009987 GO:0010253 GO:0010280 GO:0010315 GO:0010646 GO:0010817 GO:0010928 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0023051 GO:0030054 GO:0030154 GO:0032502 GO:0033478 GO:0034641 GO:0034654 GO:0042127 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0048583 GO:0048869 GO:0050377 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0055044 GO:0055086 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

688

Amino Acids

77.43

Weight (kDa)

6.68

Isoelectric Point (pI)

37.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	25 - 335	7.9e-15	RmlD substrate binding domain
Epimerase	PF01370	26 - 268	5e-55	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	26 - 297	3.9e-20	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	27 - 332	2.8e-65	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	27 - 252	2.1e-23	3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4	PF07993	28 - 208	2.2e-18	Male sterility protein
RmlD_sub_bind	PF04321	402 - 572	1.6e-14	RmlD substrate binding domain
Epimerase	PF01370	405 - 554	2.7e-11	NAD dependent epimerase/dehydratase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78570
fragaria_vesca	FvH4_3g17640 FvH4_3g17640 FvH4_3g17640
malus_domestica	MD03G1250400.v1.1 MD11G1270500.v1.1
prunus_persica	Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1
pyrus_communis	pycom11g23940
rosa_chinensis	RchiOBHm_Chr5g0029371
rosa_laevigata	RLG00000033159
rosa_multiflora	Rmu_sc0004373.1_g000022
rosa_roxburghii	Rroxscaffold_1G00050590
rosa_rugosa	Rorug05G0113800 Rorug05G0113900
rosa_samantha	Rh5AG205700 Rh5BG204100 Rh5CG226000 Rh5DG207700
rosa_wichuraiana	Rw5G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	596, 1203, 1725
Acc36I	ACCTGC	1 cut(s)	564
AccB1I	GGYRCC	1 cut(s)	380
AccBSI	CCGCTC	1 cut(s)	964
AccI	GTMKAC	2 cut(s)	330, 1381
AccII	CGCG	2 cut(s)	606, 1696
AciI	CCGC	6 cut(s)	604, 606, 964, 1694, 1801, 1944
AclWI	GGATC	2 cut(s)	16, 1314
AcoI	YGGCCR	3 cut(s)	415, 784, 834
AcsI	RAATTY	2 cut(s)	1492, 1634
AcuI	CTGAAG	3 cut(s)	1007, 1131, 1581
AcyI	GRCGYC	1 cut(s)	1297
AfaI	GTAC	5 cut(s)	794, 920, 1007, 1245, 1871
AfiI	CCNNNNNNNGG	3 cut(s)	52, 698, 699
AjnI	CCWGG	4 cut(s)	26, 971, 1078, 1834
AluBI	AGCT	7 cut(s)	95, 172, 351, 542, 723, 1255, 1624
AluI	AGCT	7 cut(s)	95, 172, 351, 542, 723, 1255, 1624
Alw26I	GTCTC	3 cut(s)	458, 1087, 1141
AlwI	GGATC	2 cut(s)	16, 1314
Ama87I	CYCGRG	1 cut(s)	1994
AoxI	GGCC	4 cut(s)	415, 784, 834, 1608
ApeKI	GCWGC	4 cut(s)	92, 314, 1322, 1364
ApoI	RAATTY	2 cut(s)	1492, 1634
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
Asp700I	GAANNNNTTC	4 cut(s)	762, 1422, 1634, 1988
AspS9I	GGNCC	1 cut(s)	623
AsuHPI	GGTGA	5 cut(s)	131, 210, 473, 1043, 1699
AsuII	TTCGAA	2 cut(s)	185, 1663
AvaI	CYCGRG	1 cut(s)	1994
AvaII	GGWCC	1 cut(s)	623
BaeGI	GKGCMC	1 cut(s)	1048
BalI	TGGCCA	3 cut(s)	417, 786, 836
BanI	GGYRCC	1 cut(s)	380
BanII	GRGCYC	1 cut(s)	1482
BbsI	GAAGAC	4 cut(s)	3, 998, 1305, 1572
BbvI	GCAGC	4 cut(s)	104, 326, 1309, 1351
BccI	CCATC	4 cut(s)	698, 1679, 1766, 1786
BcgI	CGANNNNNNTGC	4 cut(s)	334, 368, 725, 759
BciT130I	CCWGG	4 cut(s)	28, 973, 1080, 1836
BclI	TGATCA	1 cut(s)	931
BcoDI	GTCTC	3 cut(s)	458, 1087, 1141
BfaI	CTAG	2 cut(s)	395, 1454
BfmI	CTRYAG	2 cut(s)	996, 1323
BfuAI	ACCTGC	1 cut(s)	564
BisI	GCNGC	5 cut(s)	93, 315, 1323, 1365, 1944
BlsI	GCNGC	5 cut(s)	94, 316, 1324, 1366, 1945
Bme1390I	CCNGG	4 cut(s)	28, 973, 1080, 1836
Bme18I	GGWCC	1 cut(s)	623
BmeT110I	CYCGRG	1 cut(s)	1994
BmgT120I	GGNCC	1 cut(s)	623
BmiI	GGNNCC	4 cut(s)	382, 1161, 1444, 1481
BmrFI	CCNGG	4 cut(s)	28, 973, 1080, 1836
BmrI	ACTGGG	3 cut(s)	96, 1236, 1512
BmsI	GCATC	7 cut(s)	466, 509, 888, 1065, 1513, 1957, 1979
BmuI	ACTGGG	3 cut(s)	96, 1236, 1512
BoxI	GACNNNNGTC	1 cut(s)	326
BpiI	GAAGAC	4 cut(s)	3, 998, 1305, 1572
BpmI	CTGGAG	1 cut(s)	564
Bpu14I	TTCGAA	2 cut(s)	185, 1663
BpuEI	CTTGAG	3 cut(s)	1123, 1322, 1828
BsaBI	GATNNNNATC	1 cut(s)	20
BsaHI	GRCGYC	1 cut(s)	1297
BsaJI	CCNNGG	8 cut(s)	26, 604, 747, 972, 1605, 1611, 1835, 1929
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 698, 699
Bse118I	RCCGGY	1 cut(s)	123
Bse1I	ACTGG	6 cut(s)	91, 418, 1028, 1231, 1381, 1507
Bse3DI	GCAATG	1 cut(s)	102
Bse8I	GATNNNNATC	1 cut(s)	20
BseBI	CCWGG	4 cut(s)	28, 973, 1080, 1836
BseDI	CCNNGG	8 cut(s)	26, 604, 747, 972, 1605, 1611, 1835, 1929
BseGI	GGATG	9 cut(s)	75, 432, 709, 745, 1057, 1531, 1771, 1970, 1972
BseJI	GATNNNNATC	1 cut(s)	20
BseLI	CCNNNNNNNGG	3 cut(s)	52, 698, 699
BseMI	GCAATG	1 cut(s)	102
BseMII	CTCAG	2 cut(s)	276, 1116
BseNI	ACTGG	6 cut(s)	91, 418, 1028, 1231, 1381, 1507
BseRI	GAGGAG	5 cut(s)	266, 500, 733, 1176, 1634
BseSI	GKGCMC	1 cut(s)	1048
BseXI	GCAGC	4 cut(s)	104, 326, 1309, 1351
Bsh1236I	CGCG	2 cut(s)	606, 1696
BshFI	GGCC	4 cut(s)	417, 786, 836, 1610
BshNI	GGYRCC	1 cut(s)	380
BsiHKCI	CYCGRG	1 cut(s)	1994
BsiSI	CCGG	1 cut(s)	124
BslFI	GGGAC	2 cut(s)	257, 817
BslI	CCNNNNNNNGG	3 cut(s)	52, 698, 699
BsmAI	GTCTC	3 cut(s)	458, 1087, 1141
BsmFI	GGGAC	2 cut(s)	257, 817
BsmI	GAATGC	1 cut(s)	1671
BsnI	GGCC	4 cut(s)	417, 786, 836, 1610
BsoBI	CYCGRG	1 cut(s)	1994
Bsp119I	TTCGAA	2 cut(s)	185, 1663
Bsp1286I	GDGCHC	2 cut(s)	1048, 1482
Bsp1407I	TGTACA	2 cut(s)	792, 1869
Bsp143I	GATC	5 cut(s)	15, 21, 931, 1212, 1306
Bsp19I	CCATGG	1 cut(s)	1611
BspACI	CCGC	6 cut(s)	604, 606, 964, 1694, 1801, 1944
BspANI	GGCC	4 cut(s)	417, 786, 836, 1610
BspCNI	CTCAG	2 cut(s)	277, 1117
BspFNI	CGCG	2 cut(s)	606, 1696
BspLI	GGNNCC	4 cut(s)	382, 1161, 1444, 1481
BspMAI	CTGCAG	1 cut(s)	1327
BspMI	ACCTGC	1 cut(s)	564
BspPI	GGATC	2 cut(s)	16, 1314
BspQI	GCTCTTC	1 cut(s)	1914
BspT104I	TTCGAA	2 cut(s)	185, 1663
BspT107I	GGYRCC	1 cut(s)	380
BsrBI	CCGCTC	1 cut(s)	964
BsrDI	GCAATG	1 cut(s)	102
BsrFI	RCCGGY	1 cut(s)	123
BsrGI	TGTACA	2 cut(s)	792, 1869
BsrI	ACTGG	6 cut(s)	91, 418, 1028, 1231, 1381, 1507
BssAI	RCCGGY	1 cut(s)	123
BssECI	CCNNGG	8 cut(s)	26, 604, 747, 972, 1605, 1611, 1835, 1929
BssMI	GATC	5 cut(s)	15, 21, 931, 1212, 1306
BssNI	GRCGYC	1 cut(s)	1297
BssT1I	CCWWGG	3 cut(s)	1605, 1611, 1929
Bst2UI	CCWGG	4 cut(s)	28, 973, 1080, 1836
Bst4CI	ACNGT	1 cut(s)	946
Bst6I	CTCTTC	4 cut(s)	693, 972, 1107, 1914
BstACI	GRCGYC	1 cut(s)	1297
BstAUI	TGTACA	2 cut(s)	792, 1869
BstBI	TTCGAA	2 cut(s)	185, 1663
BstC8I	GCNNGC	3 cut(s)	97, 877, 1926
BstDEI	CTNAG	5 cut(s)	210, 285, 1011, 1125, 1655
BstDSI	CCRYGG	2 cut(s)	604, 1611
BstF5I	GGATG	9 cut(s)	75, 432, 709, 745, 1057, 1531, 1771, 1970, 1972
BstFNI	CGCG	2 cut(s)	606, 1696
BstKTI	GATC	5 cut(s)	18, 24, 934, 1215, 1309
BstMAI	GTCTC	3 cut(s)	458, 1087, 1141
BstMBI	GATC	5 cut(s)	15, 21, 931, 1212, 1306
BstMWI	GCNNNNNNNGC	3 cut(s)	169, 539, 1436
BstNI	CCWGG	4 cut(s)	28, 973, 1080, 1836
BstNSI	RCATGY	2 cut(s)	405, 879
BstPAI	GACNNNNGTC	1 cut(s)	326
BstSCI	CCNGG	4 cut(s)	26, 971, 1078, 1834
BstSFI	CTRYAG	2 cut(s)	996, 1323
BstSLI	GKGCMC	1 cut(s)	1048
BstUI	CGCG	2 cut(s)	606, 1696
BstV1I	GCAGC	4 cut(s)	104, 326, 1309, 1351
BstV2I	GAAGAC	4 cut(s)	3, 998, 1305, 1572
BstXI	CCANNNNNNTGG	1 cut(s)	1612
BsuRI	GGCC	4 cut(s)	417, 786, 836, 1610
BtgI	CCRYGG	2 cut(s)	604, 1611
BtsCI	GGATG	9 cut(s)	75, 432, 709, 745, 1057, 1531, 1771, 1970, 1972
BtsI	GCAGTG	1 cut(s)	1046
BtsIMutI	CAGTG	4 cut(s)	282, 411, 1046, 1557
BveI	ACCTGC	1 cut(s)	564
Cac8I	GCNNGC	3 cut(s)	97, 877, 1926
Cfr10I	RCCGGY	1 cut(s)	123
Cfr13I	GGNCC	1 cut(s)	623
Cfr42I	CCGCGG	1 cut(s)	607
CseI	GACGC	1 cut(s)	1286
Csp6I	GTAC	5 cut(s)	793, 919, 1006, 1244, 1870
CspCI	CAANNNNNGTGG	4 cut(s)	1050, 1085, 1159, 1194
CviQI	GTAC	5 cut(s)	793, 919, 1006, 1244, 1870
DdeI	CTNAG	5 cut(s)	210, 285, 1011, 1125, 1655
DpnI	GATC	5 cut(s)	17, 23, 933, 1214, 1308
DpnII	GATC	5 cut(s)	15, 21, 931, 1212, 1306
EaeI	YGGCCR	3 cut(s)	415, 784, 834
Eam1104I	CTCTTC	4 cut(s)	693, 972, 1107, 1914
EarI	CTCTTC	4 cut(s)	693, 972, 1107, 1914
Eco130I	CCWWGG	3 cut(s)	1605, 1611, 1929
Eco24I	GRGCYC	1 cut(s)	1482
Eco47I	GGWCC	1 cut(s)	623
Eco57I	CTGAAG	3 cut(s)	1007, 1131, 1581
Eco88I	CYCGRG	1 cut(s)	1994
EcoRI	GAATTC	1 cut(s)	1634
EcoRII	CCWGG	4 cut(s)	26, 971, 1078, 1834
EcoT14I	CCWWGG	3 cut(s)	1605, 1611, 1929
EcoT22I	ATGCAT	3 cut(s)	309, 881, 1972
EcoT38I	GRGCYC	1 cut(s)	1482
ErhI	CCWWGG	3 cut(s)	1605, 1611, 1929
FalI	AAGNNNNNCTT	6 cut(s)	1284, 1316, 1790, 1822, 2018, 2050
FaqI	GGGAC	2 cut(s)	257, 817
FauI	CCCGC	2 cut(s)	611, 1701
FauNDI	CATATG	1 cut(s)	568
FbaI	TGATCA	1 cut(s)	931
FblI	GTMKAC	2 cut(s)	330, 1381
Fnu4HI	GCNGC	5 cut(s)	93, 315, 1323, 1365, 1944
FokI	GGATG	9 cut(s)	62, 419, 716, 752, 1044, 1518, 1778, 1957, 1979
FriOI	GRGCYC	1 cut(s)	1482
Fsp4HI	GCNGC	5 cut(s)	93, 315, 1323, 1365, 1944
FspBI	CTAG	2 cut(s)	395, 1454
GluI	GCNGC	5 cut(s)	93, 315, 1323, 1365, 1944
GsuI	CTGGAG	1 cut(s)	564
HaeIII	GGCC	4 cut(s)	417, 786, 836, 1610
HapII	CCGG	1 cut(s)	124
HgaI	GACGC	1 cut(s)	1286
Hin1I	GRCGYC	1 cut(s)	1297
HincII	GTYRAC	4 cut(s)	268, 331, 942, 1738
HindII	GTYRAC	4 cut(s)	268, 331, 942, 1738
HindIII	AAGCTT	1 cut(s)	170
HinfI	GANTC	9 cut(s)	287, 649, 866, 1015, 1127, 1273, 1403, 1858, 2015
HpaII	CCGG	1 cut(s)	124
HphI	GGTGA	5 cut(s)	131, 210, 473, 1043, 1699
Hpy188I	TCNGA	6 cut(s)	871, 936, 961, 1126, 1335, 1681
HpyAV	CCTTC	3 cut(s)	212, 805, 1176
HpyCH4III	ACNGT	1 cut(s)	946
HpyF10VI	GCNNNNNNNGC	3 cut(s)	169, 539, 1436
HpyF3I	CTNAG	5 cut(s)	210, 285, 1011, 1125, 1655
Hsp92I	GRCGYC	1 cut(s)	1297
Ksp22I	TGATCA	1 cut(s)	931
KspI	CCGCGG	1 cut(s)	607
Kzo9I	GATC	5 cut(s)	15, 21, 931, 1212, 1306
LguI	GCTCTTC	1 cut(s)	1914
LmnI	GCTCC	4 cut(s)	545, 720, 1485, 1621
Lsp1109I	GCAGC	4 cut(s)	104, 326, 1309, 1351
LweI	GCATC	7 cut(s)	466, 509, 888, 1065, 1513, 1957, 1979
MaeI	CTAG	2 cut(s)	395, 1454
MaeIII	GTNAC	5 cut(s)	137, 216, 409, 1372, 1697
MalI	GATC	5 cut(s)	17, 23, 933, 1214, 1308
MbiI	CCGCTC	1 cut(s)	964
MboI	GATC	5 cut(s)	15, 21, 931, 1212, 1306
MfeI	CAATTG	1 cut(s)	1914
MhlI	GDGCHC	2 cut(s)	1048, 1482
MlsI	TGGCCA	3 cut(s)	417, 786, 836
MluNI	TGGCCA	3 cut(s)	417, 786, 836
MlyI	GAGTC	4 cut(s)	296, 860, 1136, 2024
Mox20I	TGGCCA	3 cut(s)	417, 786, 836
Mph1103I	ATGCAT	3 cut(s)	309, 881, 1972
MroXI	GAANNNNTTC	4 cut(s)	762, 1422, 1634, 1988
MscI	TGGCCA	3 cut(s)	417, 786, 836
MseI	TTAA	5 cut(s)	38, 237, 1341, 1359, 2065
MslI	CAYNNNNRTG	2 cut(s)	702, 1101
Msp20I	TGGCCA	3 cut(s)	417, 786, 836
MspA1I	CMGCKG	2 cut(s)	95, 606
MspI	CCGG	1 cut(s)	124
MspR9I	CCNGG	4 cut(s)	28, 973, 1080, 1836
MunI	CAATTG	1 cut(s)	1914
Mva1269I	GAATGC	1 cut(s)	1671
MvaI	CCWGG	4 cut(s)	28, 973, 1080, 1836
MvnI	CGCG	2 cut(s)	606, 1696
MwoI	GCNNNNNNNGC	3 cut(s)	169, 539, 1436
NcoI	CCATGG	1 cut(s)	1611
NdeI	CATATG	1 cut(s)	568
NdeII	GATC	5 cut(s)	15, 21, 931, 1212, 1306
NlaIV	GGNNCC	4 cut(s)	382, 1161, 1444, 1481
NmeAIII	GCCGAG	1 cut(s)	772
NmuCI	GTSAC	4 cut(s)	137, 216, 409, 1372
NsiI	ATGCAT	3 cut(s)	309, 881, 1972
NspI	RCATGY	2 cut(s)	405, 879
NspV	TTCGAA	2 cut(s)	185, 1663
PaeI	GCATGC	1 cut(s)	879
PciSI	GCTCTTC	1 cut(s)	1914
PctI	GAATGC	1 cut(s)	1671
PdmI	GAANNNNTTC	4 cut(s)	762, 1422, 1634, 1988
PfeI	GAWTC	5 cut(s)	649, 1015, 1273, 1403, 1858
PflFI	GACNNNGTC	1 cut(s)	263
PkrI	GCNGC	5 cut(s)	94, 316, 1324, 1366, 1945
PleI	GAGTC	4 cut(s)	295, 860, 1135, 2023
PpsI	GAGTC	4 cut(s)	295, 860, 1135, 2023
PshAI	GACNNNNGTC	1 cut(s)	326
PsiI	TTATAA	3 cut(s)	596, 1203, 1725
Psp6I	CCWGG	4 cut(s)	26, 971, 1078, 1834
PspGI	CCWGG	4 cut(s)	26, 971, 1078, 1834
PspN4I	GGNNCC	4 cut(s)	382, 1161, 1444, 1481
PspPI	GGNCC	1 cut(s)	623
PstI	CTGCAG	1 cut(s)	1327
PsyI	GACNNNGTC	1 cut(s)	263
PvuII	CAGCTG	1 cut(s)	95
RsaI	GTAC	5 cut(s)	794, 920, 1007, 1245, 1871
RsaNI	GTAC	5 cut(s)	793, 919, 1006, 1244, 1870
RseI	CAYNNNNRTG	2 cut(s)	702, 1101
SacII	CCGCGG	1 cut(s)	607
SalI	GTCGAC	1 cut(s)	329
SapI	GCTCTTC	1 cut(s)	1914
SaqAI	TTAA	5 cut(s)	38, 237, 1341, 1359, 2065
SatI	GCNGC	5 cut(s)	93, 315, 1323, 1365, 1944
Sau3AI	GATC	5 cut(s)	15, 21, 931, 1212, 1306
Sau96I	GGNCC	1 cut(s)	623
SchI	GAGTC	4 cut(s)	296, 860, 1136, 2024
ScrFI	CCNGG	4 cut(s)	28, 973, 1080, 1836
SduI	GDGCHC	2 cut(s)	1048, 1482
SfaNI	GCATC	7 cut(s)	466, 509, 888, 1065, 1513, 1957, 1979
SfcI	CTRYAG	2 cut(s)	996, 1323
Sfr303I	CCGCGG	1 cut(s)	607
SfuI	TTCGAA	2 cut(s)	185, 1663
SgrBI	CCGCGG	1 cut(s)	607
SinI	GGWCC	1 cut(s)	623
SmiMI	CAYNNNNRTG	2 cut(s)	702, 1101
SmlI	CTYRAG	3 cut(s)	1138, 1301, 1807
SmoI	CTYRAG	3 cut(s)	1138, 1301, 1807
SphI	GCATGC	1 cut(s)	879
SsiI	CCGC	6 cut(s)	604, 606, 964, 1694, 1801, 1944
SspI	AATATT	3 cut(s)	154, 799, 1339
SspMI	CTAG	2 cut(s)	395, 1454
StyD4I	CCNGG	4 cut(s)	26, 971, 1078, 1834
StyI	CCWWGG	3 cut(s)	1605, 1611, 1929
TaaI	ACNGT	1 cut(s)	946
TaqII	GACCGA	1 cut(s)	1299
TatI	WGTACW	3 cut(s)	792, 1243, 1869
TauI	GCSGC	1 cut(s)	1946
TfiI	GAWTC	5 cut(s)	649, 1015, 1273, 1403, 1858
Tru1I	TTAA	5 cut(s)	38, 237, 1341, 1359, 2065
Tru9I	TTAA	5 cut(s)	38, 237, 1341, 1359, 2065
TscAI	CASTG	4 cut(s)	289, 418, 1053, 1564
TseFI	GTSAC	4 cut(s)	137, 216, 409, 1372
TseI	GCWGC	4 cut(s)	92, 314, 1322, 1364
Tsp45I	GTSAC	4 cut(s)	137, 216, 409, 1372
TspRI	CASTG	4 cut(s)	289, 418, 1053, 1564
Tth111I	GACNNNGTC	1 cut(s)	263
VpaK11BI	GGWCC	1 cut(s)	623
XapI	RAATTY	2 cut(s)	1492, 1634
XbaI	TCTAGA	1 cut(s)	394
XceI	RCATGY	2 cut(s)	405, 879
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1896
XmiI	GTMKAC	2 cut(s)	330, 1381
XmnI	GAANNNNTTC	4 cut(s)	762, 1422, 1634, 1988
XspI	CTAG	2 cut(s)	395, 1454
Zsp2I	ATGCAT	3 cut(s)	309, 881, 1972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.