Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004524.1

Orthogroup ID

OG0011576

Physical Location & Seq

Genomic Coordinates Reverse (-)

36591 .. 43809

Gene Structure 7219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004524.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

atgatgccggaagagcgcttcaatgtccgccacgctcataagcccaggagggacgcctatgggtttgctttgagacctcaatatgtacaaacatatcaagaatacgctcatatctacaaggaggaggaagatgaacgatcagataaatggaagaatttccttgaacatatagaaaaatcttctcagtcgtgctctcttgagaaggcacatacagaggaattgccagctgaagctacagagcagaaggcatatagagaggaacttcaagctgaacctactgagcagaaagcagagatagtttctgagagcgatgaggaagggaatgacaaaagtagtctgaaatctatttctgaaggttcatcagaaagagatcccaaaaaggaggctcaacttccaaaggaaacaggaaaaagtaaggtccaaacatggaccttcattaggtcatcccttagttccattgaaaatatgatgagcattcgtgttaggaaacaaaagaatatgaaagatgagcatatagttgtggataaagaccatcttccatcaatagaagaagttccttcacaagatgcttttgaggatggtcaagaggaagacatttatcttgatgcctccagtggagcaacttctgtaagtaacagagaatctgacggattgaaagcttctggggaagatgaggttgtggatggtggtgtctgtaacagtgtgcaagctgatcggacaaaagaggatgtggctaatgggatccatccagaacctctctttccttggaaccaggaactggagtcccttgttcatggaggagttccaagagatctcaggggagaggtatggcaagcttttgtaggtgtgaaggctcgtcgggtggagaaatattattatgacctactggctgaagaaacagatcctggcgaaagcatggataatgataattcatgtggtgctttcagaaaatggagaaagcagattgagaaggacataccacgtacctttccaggacatccagcattagatgagaacggtcggaattcattgaggcgtttgcttttggcttatgctcgtcataacccctctgttgggtactgccaggcaatgaatttctttgcagggttattgctacttctgatgcctgaggaaaatgctttttggactttggtgggtatcatggacgactattttgatggctactatactgaagaaatgatagaatctcaggtggaccagcttgtttttgaggaactagtgcgagaaaagtttccaaaattggtgaatcatctggattacttgggagtccaggtgggatggatcattggaccctggtttctttccatttttgtaaatatgattccttgggaaagtgttattcgagtttgggacgtgcttctgtttgaaggaaatcgtgttatgctatttcgaacagcacttgctttattggagttatatggtcctgctatagtcaccactaaagatgcaggggatgctattgttttgtttcagtcccttgttggctccacatttgatagcagccagctagttttgactgcatgcatgggatttttagctataactgaaactagattgaaagagttgagagataagcaccggccaactgtattagaagtagttgaggaaagagctagggctaagaaatggaaggattcaaaagggctatcagctaagctgtacagttttaagcatgatcctactataacagaagaaaaaagtactactgaagaagaaagcgccaatggagatgtatctcaatcgaaatctgattcctgtaatctagatgaaatgcttaaaggcctatctctttcttcagaactagattccttatcggatcctcaggaccaggtggattggttgaaggttgagttatgcagggtgctggaggagaaaagatcttctgtactcagatccgaggagttggagacggcacttatggagattgtcaggcatgataatcgacgagaattaagtgcaaaggttgagcagttggagcacgaggtggctgagctacaccaagcccttgaggacaagacagagcaagaagctgcaatgcttaaggtattgatgctggtagagcaagaacaaaaggtaactgaagaagccagaataagtgccgagcaagaagcaataacacagaaacatgcactttatgtgcttcaggaaaaatatgacaaagctatgtcttcacttactgaaatggaaaagagggtaaaagtggcagaatcaatgctggaggctacattgcaatatgaatctggccaagctaaagctttatctccacggtctttgccaggctcaacgcagggaaatcccacaaggaagatacctcttctgtcatttggacttggttggcgtgacagaatgaagagatccaatgacagtaaatcaaccaatgaacaaagtgacccaccaattccacaagaggaaaccactcccactccacaagagaaaacttctcccactccacaggaaaaaactggtgaggaagtgcaggaacatgtagaggggggaagtgatacccaagtatttgactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

846

Amino Acids

96.27

Weight (kDa)

4.85

Isoelectric Point (pI)

55.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011576)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15020
malus_domestica	MD04G1112400.v1.1 MD12G1129300.v1.1
prunus_persica	Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1
pyrus_communis	pycom04g10320 pycom12g12560
rosa_chinensis	RchiOBHm_Chr3g0468201
rosa_laevigata	RLG00000024442
rosa_multiflora	Rmu_sc0004524.1_g000007
rosa_roxburghii	Rroxscaffold_6G00412920
rosa_rugosa	Rorug03G0094100
rosa_samantha	Rh3AG141800 Rh3BG163200 Rh3CG163300 Rh3DG163900
rosa_wichuraiana	Rw3G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	778
AciI	CCGC	1 cut(s)	28
AcoI	YGGCCR	2 cut(s)	1601, 2263
AcsI	RAATTY	3 cut(s)	154, 1024, 1093
AcuI	CTGAAG	8 cut(s)	249, 372, 912, 1212, 1749, 1800, 2121, 2147
AcyI	GRCGYC	1 cut(s)	54
AdeI	CACNNNGTG	1 cut(s)	2005
AfaI	GTAC	6 cut(s)	87, 985, 1079, 1682, 1723, 1908
AfeI	AGCGCT	1 cut(s)	17
AfiI	CCNNNNNNNGG	4 cut(s)	438, 778, 1073, 1074
AflII	CTTAAG	1 cut(s)	2060
AflIII	ACRYGT	1 cut(s)	2503
AgsI	TTSAA	9 cut(s)	22, 164, 266, 461, 655, 1388, 1579, 1659, 1864
AhlI	ACTAGT	1 cut(s)	1237
AjiI	CACGTC	1 cut(s)	1375
AjnI	CCWGG	9 cut(s)	44, 771, 904, 991, 1083, 1290, 1313, 1848, 2296
Alw21I	GWGCWC	2 cut(s)	194, 2001
Alw26I	GTCTC	2 cut(s)	67, 1922
AlwNI	CAGNNNCTG	2 cut(s)	778, 905
Aor51HI	AGCGCT	1 cut(s)	17
AoxI	GGCC	3 cut(s)	1601, 1801, 2263
ApeKI	GCWGC	2 cut(s)	1521, 2051
ApoI	RAATTY	3 cut(s)	154, 1024, 1093
ArsI	GACNNNNNNTTYG	2 cut(s)	1157, 1189
Asp700I	GAANNNNTTC	3 cut(s)	155, 552, 1251
AspLEI	GCGC	2 cut(s)	18, 1742
AspS9I	GGNCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
AsuHPI	GGTGA	3 cut(s)	1276, 1447, 2498
AsuII	TTCGAA	1 cut(s)	1411
AvaII	GGWCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
AxyI	CCTNAGG	2 cut(s)	1128, 1842
BaeI	ACNNNNGTAYC	1 cut(s)	2514
BalI	TGGCCA	1 cut(s)	2265
BamHI	GGATCC	2 cut(s)	741, 1837
BauI	CACGAG	1 cut(s)	2000
BbsI	GAAGAC	2 cut(s)	597, 2181
Bbv12I	GWGCWC	2 cut(s)	194, 2001
BbvI	GCAGC	2 cut(s)	1533, 2038
BccI	CCATC	7 cut(s)	540, 547, 572, 677, 753, 1172, 1293
BceAI	ACGGC	1 cut(s)	1947
BcgI	CGANNNNNNTGC	4 cut(s)	695, 729, 1943, 1977
BciT130I	CCWGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
BcoDI	GTCTC	2 cut(s)	67, 1922
BcuI	ACTAGT	1 cut(s)	1237
BfaI	CTAG	7 cut(s)	1238, 1529, 1572, 1635, 1784, 1823, 2539
BfmI	CTRYAG	2 cut(s)	234, 1449
BfoI	RGCGCY	2 cut(s)	19, 1743
BfrI	CTTAAG	1 cut(s)	2060
BglII	AGATCT	2 cut(s)	811, 1898
BisI	GCNGC	2 cut(s)	1522, 2052
BlpI	GCTNAGC	2 cut(s)	1674, 2010
BlsI	GCNGC	2 cut(s)	1523, 2053
BmcAI	AGTACT	1 cut(s)	1723
Bme1390I	CCNGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
Bme18I	GGWCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
BmgBI	CACGTC	1 cut(s)	1375
BmgT120I	GGNCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
BmiI	GGNNCC	5 cut(s)	743, 770, 1312, 1507, 1839
BmrFI	CCNGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
BmsI	GCATC	6 cut(s)	556, 595, 1113, 1456, 1465, 2061
BpiI	GAAGAC	2 cut(s)	597, 2181
BpmI	CTGGAG	4 cut(s)	595, 800, 1907, 2258
Bpu1102I	GCTNAGC	2 cut(s)	1674, 2010
Bpu14I	TTCGAA	1 cut(s)	1411
BpuEI	CTTGAG	2 cut(s)	218, 2048
BsaAI	YACGTR	1 cut(s)	983
BsaHI	GRCGYC	1 cut(s)	54
BsaI	GGTCTC	1 cut(s)	67
BsaJI	CCNNGG	6 cut(s)	44, 764, 1313, 1346, 1917, 2285
BsaXI	ACNNNNNCTCC	4 cut(s)	1278, 1308, 2428, 2458
Bsc4I	CCNNNNNNNGG	4 cut(s)	438, 778, 1073, 1074
Bse118I	RCCGGY	1 cut(s)	1599
Bse1I	ACTGG	4 cut(s)	612, 783, 891, 2488
Bse21I	CCTNAGG	2 cut(s)	1128, 1842
Bse3DI	GCAATG	3 cut(s)	1095, 2061, 2246
BseBI	CCWGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
BseDI	CCNNGG	6 cut(s)	44, 764, 1313, 1346, 1917, 2285
BseGI	GGATG	8 cut(s)	443, 583, 688, 733, 745, 997, 1304, 1480
BseLI	CCNNNNNNNGG	4 cut(s)	438, 778, 1073, 1074
BseMI	GCAATG	3 cut(s)	1095, 2061, 2246
BseMII	CTCAG	9 cut(s)	197, 270, 294, 829, 1119, 1223, 1856, 1924, 2001
BseNI	ACTGG	4 cut(s)	612, 783, 891, 2488
BseRI	GAGGAG	4 cut(s)	137, 813, 1904, 1934
BseXI	GCAGC	2 cut(s)	1533, 2038
BsgI	GTGCAG	1 cut(s)	2516
Bsh1285I	CGRYCG	1 cut(s)	1021
BshFI	GGCC	3 cut(s)	1603, 1803, 2265
BsiEI	CGRYCG	1 cut(s)	1021
BsiHKAI	GWGCWC	2 cut(s)	194, 2001
BsiSI	CCGG	2 cut(s)	8, 1600
BslFI	GGGAC	4 cut(s)	65, 769, 1385, 1480
BslI	CCNNNNNNNGG	4 cut(s)	438, 778, 1073, 1074
BsmAI	GTCTC	2 cut(s)	67, 1922
BsmBI	CGTCTC	1 cut(s)	1922
BsmFI	GGGAC	4 cut(s)	65, 769, 1385, 1480
BsmI	GAATGC	1 cut(s)	474
BsnI	GGCC	3 cut(s)	1603, 1803, 2265
Bso31I	GGTCTC	1 cut(s)	67
Bsp119I	TTCGAA	1 cut(s)	1411
Bsp1286I	GDGCHC	2 cut(s)	194, 2001
Bsp1407I	TGTACA	2 cut(s)	85, 1680
Bsp1720I	GCTNAGC	2 cut(s)	1674, 2010
BspACI	CCGC	1 cut(s)	28
BspANI	GGCC	3 cut(s)	1603, 1803, 2265
BspCNI	CTCAG	9 cut(s)	196, 271, 295, 828, 1120, 1222, 1855, 1923, 2002
BspLI	GGNNCC	5 cut(s)	743, 770, 1312, 1507, 1839
BspQI	GCTCTTC	1 cut(s)	6
BspT104I	TTCGAA	1 cut(s)	1411
BspTI	CTTAAG	1 cut(s)	2060
BspTNI	GGTCTC	1 cut(s)	67
BsrDI	GCAATG	3 cut(s)	1095, 2061, 2246
BsrFI	RCCGGY	1 cut(s)	1599
BsrGI	TGTACA	2 cut(s)	85, 1680
BsrI	ACTGG	4 cut(s)	612, 783, 891, 2488
BssAI	RCCGGY	1 cut(s)	1599
BssECI	CCNNGG	6 cut(s)	44, 764, 1313, 1346, 1917, 2285
BssNI	GRCGYC	1 cut(s)	54
BssSI	CACGAG	1 cut(s)	2000
BssT1I	CCWWGG	2 cut(s)	764, 1346
Bst2BI	CACGAG	1 cut(s)	2000
Bst2UI	CCWGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
Bst4CI	ACNGT	6 cut(s)	701, 1019, 1609, 1685, 2289, 2387
Bst6I	CTCTTC	3 cut(s)	6, 2340, 2366
BstACI	GRCGYC	1 cut(s)	54
BstAFI	CTTAAG	1 cut(s)	2060
BstAPI	GCANNNNNTGC	1 cut(s)	1475
BstAUI	TGTACA	2 cut(s)	85, 1680
BstBAI	YACGTR	1 cut(s)	983
BstBI	TTCGAA	1 cut(s)	1411
BstC8I	GCNNGC	5 cut(s)	225, 708, 834, 1526, 1543
BstDSI	CCRYGG	1 cut(s)	2285
BstENI	CCTNNNNNAGG	1 cut(s)	436
BstF5I	GGATG	8 cut(s)	443, 583, 688, 733, 745, 997, 1304, 1480
BstH2I	RGCGCY	2 cut(s)	19, 1743
BstHHI	GCGC	2 cut(s)	18, 1742
BstMAI	GTCTC	2 cut(s)	67, 1922
BstMCI	CGRYCG	1 cut(s)	1021
BstMWI	GCNNNNNNNGC	4 cut(s)	13, 1475, 1996, 2080
BstNI	CCWGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
BstNSI	RCATGY	3 cut(s)	1545, 2150, 2507
BstSCI	CCNGG	9 cut(s)	44, 771, 904, 991, 1083, 1290, 1313, 1848, 2296
BstSFI	CTRYAG	2 cut(s)	234, 1449
BstV1I	GCAGC	2 cut(s)	1533, 2038
BstV2I	GAAGAC	2 cut(s)	597, 2181
BstX2I	RGATCY	8 cut(s)	370, 741, 811, 901, 1837, 1898, 1913, 2375
BstYI	RGATCY	8 cut(s)	370, 741, 811, 901, 1837, 1898, 1913, 2375
Bsu36I	CCTNAGG	2 cut(s)	1128, 1842
BsuRI	GGCC	3 cut(s)	1603, 1803, 2265
BtgI	CCRYGG	1 cut(s)	2285
BtgZI	GCGATG	1 cut(s)	324
BtrI	CACGTC	1 cut(s)	1375
BtsCI	GGATG	8 cut(s)	443, 583, 688, 733, 745, 997, 1304, 1480
BtsIMutI	CAGTG	2 cut(s)	619, 706
Cac8I	GCNNGC	5 cut(s)	225, 708, 834, 1526, 1543
CaiI	CAGNNNCTG	2 cut(s)	778, 905
CfoI	GCGC	2 cut(s)	18, 1742
Cfr10I	RCCGGY	1 cut(s)	1599
Cfr13I	GGNCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
CseI	GACGC	1 cut(s)	62
CsiI	ACCWGGT	1 cut(s)	1848
Csp6I	GTAC	6 cut(s)	86, 984, 1078, 1681, 1722, 1907
CspCI	CAANNNNNGTGG	2 cut(s)	2274, 2309
CviQI	GTAC	6 cut(s)	86, 984, 1078, 1681, 1722, 1907
DraIII	CACNNNGTG	1 cut(s)	2005
EaeI	YGGCCR	2 cut(s)	1601, 2263
Eam1104I	CTCTTC	3 cut(s)	6, 2340, 2366
EarI	CTCTTC	3 cut(s)	6, 2340, 2366
EciI	GGCGGA	1 cut(s)	17
Eco130I	CCWWGG	2 cut(s)	764, 1346
Eco147I	AGGCCT	1 cut(s)	1803
Eco31I	GGTCTC	1 cut(s)	67
Eco47I	GGWCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
Eco47III	AGCGCT	1 cut(s)	17
Eco57I	CTGAAG	8 cut(s)	249, 372, 912, 1212, 1749, 1800, 2121, 2147
Eco81I	CCTNAGG	2 cut(s)	1128, 1842
EcoNI	CCTNNNNNAGG	1 cut(s)	436
EcoRI	GAATTC	1 cut(s)	1024
EcoRII	CCWGG	9 cut(s)	44, 771, 904, 991, 1083, 1290, 1313, 1848, 2296
EcoT14I	CCWWGG	2 cut(s)	764, 1346
EcoT22I	ATGCAT	1 cut(s)	1547
ErhI	CCWWGG	2 cut(s)	764, 1346
Esp3I	CGTCTC	1 cut(s)	1922
FalI	AAGNNNNNCTT	2 cut(s)	519, 551
FaqI	GGGAC	4 cut(s)	65, 769, 1385, 1480
Fnu4HI	GCNGC	2 cut(s)	1522, 2052
FokI	GGATG	8 cut(s)	430, 590, 695, 732, 740, 984, 1311, 1487
Fsp4HI	GCNGC	2 cut(s)	1522, 2052
FspBI	CTAG	7 cut(s)	1238, 1529, 1572, 1635, 1784, 1823, 2539
GlaI	GCGC	2 cut(s)	17, 1741
GluI	GCNGC	2 cut(s)	1522, 2052
GsuI	CTGGAG	4 cut(s)	595, 800, 1907, 2258
HaeII	RGCGCY	2 cut(s)	19, 1743
HaeIII	GGCC	3 cut(s)	1603, 1803, 2265
HapII	CCGG	2 cut(s)	8, 1600
HgaI	GACGC	1 cut(s)	62
HhaI	GCGC	2 cut(s)	18, 1742
Hin1I	GRCGYC	1 cut(s)	54
Hin6I	GCGC	2 cut(s)	16, 1740
HinP1I	GCGC	2 cut(s)	16, 1740
HindIII	AAGCTT	3 cut(s)	657, 834, 2274
HpaII	CCGG	2 cut(s)	8, 1600
HphI	GGTGA	3 cut(s)	1276, 1447, 2498
Hpy166II	GTNNAC	1 cut(s)	1216
Hpy188III	TCNNGA	9 cut(s)	98, 197, 584, 602, 749, 1274, 1784, 1844, 2165
Hpy8I	GTNNAC	1 cut(s)	1216
Hpy99I	CGWCG	2 cut(s)	861, 1968
HpyCH4III	ACNGT	6 cut(s)	701, 1019, 1609, 1685, 2289, 2387
HpyCH4IV	ACGT	2 cut(s)	982, 1374
HpyF10VI	GCNNNNNNNGC	4 cut(s)	13, 1475, 1996, 2080
HpySE526I	ACGT	2 cut(s)	982, 1374
Hsp92I	GRCGYC	1 cut(s)	54
HspAI	GCGC	2 cut(s)	16, 1740
LguI	GCTCTTC	1 cut(s)	6
LmnI	GCTCC	3 cut(s)	617, 1511, 1996
Lsp1109I	GCAGC	2 cut(s)	1533, 2038
LweI	GCATC	6 cut(s)	556, 595, 1113, 1456, 1465, 2061
MabI	ACCWGGT	1 cut(s)	1848
MaeI	CTAG	7 cut(s)	1238, 1529, 1572, 1635, 1784, 1823, 2539
MaeII	ACGT	2 cut(s)	982, 1374
MaeIII	GTNAC	6 cut(s)	632, 695, 1453, 2095, 2360, 2408
MflI	RGATCY	8 cut(s)	370, 741, 811, 901, 1837, 1898, 1913, 2375
MhlI	GDGCHC	2 cut(s)	194, 2001
MlsI	TGGCCA	1 cut(s)	2265
MluCI	AATT	8 cut(s)	154, 218, 928, 1024, 1093, 1259, 1970, 2418
MluNI	TGGCCA	1 cut(s)	2265
MlyI	GAGTC	2 cut(s)	791, 1296
MmeI	TCCRAC	3 cut(s)	1001, 1905, 1974
Mox20I	TGGCCA	1 cut(s)	2265
Mph1103I	ATGCAT	1 cut(s)	1547
MroXI	GAANNNNTTC	3 cut(s)	155, 552, 1251
MscI	TGGCCA	1 cut(s)	2265
MseI	TTAA	4 cut(s)	1689, 1797, 1973, 2061
Msp20I	TGGCCA	1 cut(s)	2265
MspA1I	CMGCKG	1 cut(s)	227
MspCI	CTTAAG	1 cut(s)	2060
MspI	CCGG	2 cut(s)	8, 1600
MspR9I	CCNGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
Mva1269I	GAATGC	1 cut(s)	474
MvaI	CCWGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
MwoI	GCNNNNNNNGC	4 cut(s)	13, 1475, 1996, 2080
NlaIV	GGNNCC	5 cut(s)	743, 770, 1312, 1507, 1839
NmeAIII	GCCGAG	1 cut(s)	2146
NmuCI	GTSAC	3 cut(s)	1453, 2360, 2408
NsiI	ATGCAT	1 cut(s)	1547
NspI	RCATGY	3 cut(s)	1545, 2150, 2507
NspV	TTCGAA	1 cut(s)	1411
PaeI	GCATGC	1 cut(s)	1545
PceI	AGGCCT	1 cut(s)	1803
PciI	ACATGT	1 cut(s)	2503
PciSI	GCTCTTC	1 cut(s)	6
PctI	GAATGC	1 cut(s)	474
PdmI	GAANNNNTTC	3 cut(s)	155, 552, 1251
PfeI	GAWTC	9 cut(s)	641, 1205, 1267, 1342, 1655, 1772, 1826, 2228, 2258
PflMI	CCANNNNNTGG	1 cut(s)	778
PfoI	TCCNGGA	1 cut(s)	991
PkrI	GCNGC	2 cut(s)	1523, 2053
PleI	GAGTC	2 cut(s)	790, 1295
PpsI	GAGTC	2 cut(s)	790, 1295
Ppu21I	YACGTR	1 cut(s)	983
PscI	ACATGT	1 cut(s)	2503
Psp6I	CCWGG	9 cut(s)	44, 771, 904, 991, 1083, 1290, 1313, 1848, 2296
PspGI	CCWGG	9 cut(s)	44, 771, 904, 991, 1083, 1290, 1313, 1848, 2296
PspN4I	GGNNCC	5 cut(s)	743, 770, 1312, 1507, 1839
PspPI	GGNCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
PstNI	CAGNNNCTG	2 cut(s)	778, 905
PsuI	RGATCY	8 cut(s)	370, 741, 811, 901, 1837, 1898, 1913, 2375
PvuII	CAGCTG	1 cut(s)	227
RsaI	GTAC	6 cut(s)	87, 985, 1079, 1682, 1723, 1908
RsaNI	GTAC	6 cut(s)	86, 984, 1078, 1681, 1722, 1907
SapI	GCTCTTC	1 cut(s)	6
SaqAI	TTAA	4 cut(s)	1689, 1797, 1973, 2061
SatI	GCNGC	2 cut(s)	1522, 2052
Sau96I	GGNCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
ScaI	AGTACT	1 cut(s)	1723
SchI	GAGTC	2 cut(s)	791, 1296
ScrFI	CCNGG	9 cut(s)	46, 773, 906, 993, 1085, 1292, 1315, 1850, 2298
SduI	GDGCHC	2 cut(s)	194, 2001
SexAI	ACCWGGT	1 cut(s)	1848
SfaNI	GCATC	6 cut(s)	556, 595, 1113, 1456, 1465, 2061
SfcI	CTRYAG	2 cut(s)	234, 1449
SfuI	TTCGAA	1 cut(s)	1411
SinI	GGWCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
SmlI	CTYRAG	3 cut(s)	197, 2027, 2060
SmoI	CTYRAG	3 cut(s)	197, 2027, 2060
SpeI	ACTAGT	1 cut(s)	1237
SphI	GCATGC	1 cut(s)	1545
Sse9I	AATT	8 cut(s)	154, 218, 928, 1024, 1093, 1259, 1970, 2418
SseBI	AGGCCT	1 cut(s)	1803
SsiI	CCGC	1 cut(s)	28
SspI	AATATT	1 cut(s)	872
SspMI	CTAG	7 cut(s)	1238, 1529, 1572, 1635, 1784, 1823, 2539
StuI	AGGCCT	1 cut(s)	1803
StyD4I	CCNGG	9 cut(s)	44, 771, 904, 991, 1083, 1290, 1313, 1848, 2296
StyI	CCWWGG	2 cut(s)	764, 1346
TaaI	ACNGT	6 cut(s)	701, 1019, 1609, 1685, 2289, 2387
TaiI	ACGT	2 cut(s)	985, 1377
TaqI	TCGA	4 cut(s)	1363, 1411, 1763, 1963
TasI	AATT	8 cut(s)	154, 218, 928, 1024, 1093, 1259, 1970, 2418
TatI	WGTACW	4 cut(s)	85, 1680, 1721, 1906
TfiI	GAWTC	9 cut(s)	641, 1205, 1267, 1342, 1655, 1772, 1826, 2228, 2258
Tru1I	TTAA	4 cut(s)	1689, 1797, 1973, 2061
Tru9I	TTAA	4 cut(s)	1689, 1797, 1973, 2061
TscAI	CASTG	2 cut(s)	619, 706
TseFI	GTSAC	3 cut(s)	1453, 2360, 2408
TseI	GCWGC	2 cut(s)	1521, 2051
Tsp45I	GTSAC	3 cut(s)	1453, 2360, 2408
TspGWI	ACGGA	1 cut(s)	663
TspRI	CASTG	2 cut(s)	619, 706
Van91I	CCANNNNNTGG	1 cut(s)	778
Vha464I	CTTAAG	1 cut(s)	2060
VpaK11BI	GGWCC	6 cut(s)	418, 429, 1216, 1310, 1442, 1846
XagI	CCTNNNNNAGG	1 cut(s)	436
XapI	RAATTY	3 cut(s)	154, 1024, 1093
XbaI	TCTAGA	1 cut(s)	1783
XceI	RCATGY	3 cut(s)	1545, 2150, 2507
XmnI	GAANNNNTTC	3 cut(s)	155, 552, 1251
XspI	CTAG	7 cut(s)	1238, 1529, 1572, 1635, 1784, 1823, 2539
ZrmI	AGTACT	1 cut(s)	1723
Zsp2I	ATGCAT	1 cut(s)	1547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.