Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0011576

Physical Location & Seq

Genomic Coordinates Reverse (-)

7361885 .. 7367865

Gene Structure 5981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0094100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGAAGGGCCAGGTGGCAATCATCTGGACTCGTATAGAGCTCCGGTTTCGAGCTCTAGAAGATATGGAATGCTATCTACTTCCAATTTTATTCAGGCACCACTGTCTGCCTTGCTGGAGTACTCGGGCCTTCTGCGCGGCCGTTCCAGTCACCAAGAAGCCGAGTCTTTGATTGGGGGACGTAGCGCTGCCGCGTTCAGGGAGCACCATCACGGTCAGGTGGATCAATCGAGCAATGATGGGGAGGTTTCGATTAGGATAATTGGTGCAGGGGAGCAAGAGCATGATAGGGAAGGGGGTGGTTTAGTAGTTGGACAGTTGAGGGAGAGTAATGATGTTTCCGGACAACCAATAGCTAGGGTGGGCTCTGTTACAGTGGTATCGGAGGAGGGTCAGGGAGATGGTAGAACGGATGTTGGTTCTGGAGAAGGCATGTCACAATCGATAAATGGAAGTGCTGATGGAGAAGCTGGTGATGGTGCTGGGGCTAATGGCAGGGATTCTTCGTACCAGAGATATGATATTCAGCAGGCAGCTAGGTGGATTGAGCAGGTCCTGCCCTTTTCCTTGCTTCTATTGGTGGTCTTCATTCGCCAGCATTTGCAAGGTTTCTTTGTTACTATCTGGATTGCTGCTGTTATGTTTAAGTCGAATGATATCCTAAGGAAACAGACAGCTTTGAAGGGAGAGAGGAAAATCTCTGTTCTAGTCAGCATCTCTATTGCATTCGCAGTTCATGTGATTGGTGTTTACTGGTGGTATCAGAATGATGATCTTTTGTACCCATTAGTTATGCTTCCTCCCAAAGTTATACCACCTTTCTGGCATGCTGTTTTTATCATCATGGTTAATGATACCTTGGTCCGGCAGGCAGCAATGGTGATCAAGTGTATTCTATTAATGTACTACAAGAACAGCAGAGGACGTAACTATCGTAAGCAGGGTCAAATGCTTACATTGGTTGAGTATCTACTTCTGTTGTACCGGGCCTTGTTACCAACACCAGTGTGGTATCGTTTCTTCTTGAACAAAGAATATGGTAGTCTCTTTTCTTCACTAATGACAGGGTTATATTTGACCTTCAAGCTTACGTCTGTTGTTGAGAAGGTACAATCTTTCTTTGCTGCATTGAAGGCCTTGTCACGTAAAGAGGTTCACTATGGGGCGTATGCAACATCAGAGCAGGTCAGTGCAGCTGGCGATCTATGTGCTATCTGCCAGGAGAAAATGCATGCTCCTATCTTGCTTCGTTGTAAACACATCTTCTGTGAGGACTGTGTATCAGAGTGGTTTGAGAGGGAACGGACCTGCCCGTTGTGCAGGGCTTTGGTAAAACCTGCAGATCTTAGATCGTTTGGCGATGGATCAACGAGTTTGTTCTTCCAGCTGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

464

Amino Acids

51.63

Weight (kDa)

7.63

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	401 - 444	6.1e-10	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	402 - 441	1.9e-10	Ring finger domain
zf-C3HC4	PF00097	403 - 440	3.1e-09	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	403 - 440	6.3e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	403 - 438	7.8e-08	RING-type zinc-finger
zf-RING_5	PF14634	403 - 441	2.7e-07	zinc-RING finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011576)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15020
malus_domestica	MD04G1112400.v1.1 MD12G1129300.v1.1
prunus_persica	Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1 Prupe.6G244600_v2.0.a1
pyrus_communis	pycom04g10320 pycom12g12560
rosa_chinensis	RchiOBHm_Chr3g0468201
rosa_laevigata	RLG00000024442
rosa_multiflora	Rmu_sc0004524.1_g000007
rosa_roxburghii	Rroxscaffold_6G00412920
rosa_rugosa	Rorug03G0094100
rosa_samantha	Rh3AG141800 Rh3BG163200 Rh3CG163300 Rh3DG163900
rosa_wichuraiana	Rw3G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	4 cut(s)	541, 1174, 1316, 1345
AccB1I	GGYRCC	1 cut(s)	97
AccII	CGCG	2 cut(s)	138, 194
AccIII	TCCGGA	1 cut(s)	341
AciI	CCGC	2 cut(s)	138, 192
AclWI	GGATC	2 cut(s)	231, 1372
AcoI	YGGCCR	1 cut(s)	139
AfaI	GTAC	6 cut(s)	122, 509, 782, 905, 983, 1110
AfeI	AGCGCT	1 cut(s)	187
AfiI	CCNNNNNNNGG	2 cut(s)	198, 864
AgsI	TTSAA	4 cut(s)	682, 1027, 1084, 1132
AjnI	CCWGG	2 cut(s)	10, 1218
AleI	CACNNNNGTG	1 cut(s)	1006
AluBI	AGCT	9 cut(s)	41, 54, 356, 470, 536, 677, 1087, 1196, 1387
AluI	AGCT	9 cut(s)	41, 54, 356, 470, 536, 677, 1087, 1196, 1387
Alw21I	GWGCWC	3 cut(s)	43, 56, 207
Alw26I	GTCTC	1 cut(s)	1049
AlwI	GGATC	2 cut(s)	231, 1372
AlwNI	CAGNNNCTG	1 cut(s)	556
Ama87I	CYCGRG	1 cut(s)	124
Aor13HI	TCCGGA	1 cut(s)	341
Aor51HI	AGCGCT	1 cut(s)	187
AoxI	GGCC	5 cut(s)	8, 127, 139, 987, 1134
ApeKI	GCWGC	6 cut(s)	188, 533, 632, 872, 1124, 1193
AseI	ATTAAT	1 cut(s)	899
AspLEI	GCGC	2 cut(s)	138, 188
AspS9I	GGNCC	6 cut(s)	8, 127, 553, 862, 987, 1305
AsuC2I	CCSGG	1 cut(s)	986
AsuHPI	GGTGA	3 cut(s)	143, 485, 892
AvaI	CYCGRG	1 cut(s)	124
AvaII	GGWCC	3 cut(s)	553, 862, 1305
AxyI	CCTNAGG	1 cut(s)	662
BaeI	ACNNNNGTAYC	4 cut(s)	363, 396, 846, 879
BanI	GGYRCC	1 cut(s)	97
BanII	GRGCYC	3 cut(s)	43, 56, 368
BarI	GAAGNNNNNNTAC	2 cut(s)	1004, 1036
BbsI	GAAGAC	1 cut(s)	577
Bbv12I	GWGCWC	3 cut(s)	43, 56, 207
BbvI	GCAGC	6 cut(s)	175, 545, 619, 884, 1111, 1205
BccI	CCATC	6 cut(s)	216, 233, 395, 455, 470, 1355
BceAI	ACGGC	1 cut(s)	126
BcgI	CGANNNNNNTGC	2 cut(s)	1190, 1224
BciT130I	CCWGG	2 cut(s)	12, 1220
BclI	TGATCA	1 cut(s)	882
BcnI	CCSGG	1 cut(s)	986
BcoDI	GTCTC	1 cut(s)	1049
BfaI	CTAG	4 cut(s)	57, 357, 537, 707
BfmI	CTRYAG	1 cut(s)	1338
BfoI	RGCGCY	1 cut(s)	189
BfuAI	ACCTGC	4 cut(s)	541, 1174, 1316, 1345
BglII	AGATCT	1 cut(s)	1342
BisI	GCNGC	8 cut(s)	139, 189, 192, 534, 633, 873, 1125, 1194
BlsI	GCNGC	8 cut(s)	140, 190, 193, 535, 634, 874, 1126, 1195
BmcAI	AGTACT	1 cut(s)	122
Bme1390I	CCNGG	3 cut(s)	12, 986, 1220
Bme18I	GGWCC	3 cut(s)	553, 862, 1305
BmeT110I	CYCGRG	1 cut(s)	124
BmgT120I	GGNCC	6 cut(s)	8, 127, 553, 862, 987, 1305
BmiI	GGNNCC	1 cut(s)	99
BmrFI	CCNGG	3 cut(s)	12, 986, 1220
BmsI	GCATC	1 cut(s)	723
BpiI	GAAGAC	1 cut(s)	577
BpmI	CTGGAG	2 cut(s)	137, 444
BpuMI	CCSGG	1 cut(s)	986
Bsa29I	ATCGAT	1 cut(s)	443
BsaAI	YACGTR	1 cut(s)	1145
BsaJI	CCNNGG	1 cut(s)	858
BsaWI	WCCGGW	2 cut(s)	43, 341
Bsc4I	CCNNNNNNNGG	2 cut(s)	198, 864
Bse1I	ACTGG	3 cut(s)	147, 758, 1004
Bse21I	CCTNAGG	1 cut(s)	662
Bse3DI	GCAATG	2 cut(s)	241, 882
BseAI	TCCGGA	1 cut(s)	341
BseBI	CCWGG	2 cut(s)	12, 1220
BseCI	ATCGAT	1 cut(s)	443
BseDI	CCNNGG	1 cut(s)	858
BseGI	GGATG	1 cut(s)	418
BseLI	CCNNNNNNNGG	2 cut(s)	198, 864
BseMI	GCAATG	2 cut(s)	241, 882
BseNI	ACTGG	3 cut(s)	147, 758, 1004
BseRI	GAGGAG	1 cut(s)	401
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	6 cut(s)	175, 545, 619, 884, 1111, 1205
BseYI	CCCAGC	1 cut(s)	482
BsgI	GTGCAG	3 cut(s)	288, 1212, 1339
Bsh1236I	CGCG	2 cut(s)	138, 194
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	5 cut(s)	10, 129, 141, 989, 1136
BshNI	GGYRCC	1 cut(s)	97
BshVI	ATCGAT	1 cut(s)	443
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	3 cut(s)	43, 56, 207
BsiHKCI	CYCGRG	1 cut(s)	124
BsiSI	CCGG	4 cut(s)	44, 342, 865, 985
BslFI	GGGAC	1 cut(s)	192
BslI	CCNNNNNNNGG	2 cut(s)	198, 864
BsmAI	GTCTC	1 cut(s)	1049
BsmFI	GGGAC	1 cut(s)	192
BsmI	GAATGC	2 cut(s)	75, 725
BsnI	GGCC	5 cut(s)	10, 129, 141, 989, 1136
BsoBI	CYCGRG	1 cut(s)	124
Bsp1286I	GDGCHC	4 cut(s)	43, 56, 207, 368
Bsp13I	TCCGGA	1 cut(s)	341
Bsp143I	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
BspACI	CCGC	2 cut(s)	138, 192
BspANI	GGCC	5 cut(s)	10, 129, 141, 989, 1136
BspDI	ATCGAT	1 cut(s)	443
BspEI	TCCGGA	1 cut(s)	341
BspFNI	CGCG	2 cut(s)	138, 194
BspLI	GGNNCC	1 cut(s)	99
BspMAI	CTGCAG	1 cut(s)	1342
BspMI	ACCTGC	4 cut(s)	541, 1174, 1316, 1345
BspPI	GGATC	2 cut(s)	231, 1372
BspT107I	GGYRCC	1 cut(s)	97
BsrDI	GCAATG	2 cut(s)	241, 882
BsrI	ACTGG	3 cut(s)	147, 758, 1004
BssECI	CCNNGG	1 cut(s)	858
BssMI	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
BssT1I	CCWWGG	1 cut(s)	858
Bst2UI	CCWGG	2 cut(s)	12, 1220
Bst4CI	ACNGT	5 cut(s)	105, 215, 318, 376, 1277
BstAPI	GCANNNNNTGC	1 cut(s)	556
BstBAI	YACGTR	1 cut(s)	1145
BstC8I	GCNNGC	6 cut(s)	531, 596, 828, 870, 1198, 1233
BstDEI	CTNAG	2 cut(s)	662, 1346
BstF5I	GGATG	1 cut(s)	418
BstFNI	CGCG	2 cut(s)	138, 194
BstH2I	RGCGCY	1 cut(s)	189
BstHHI	GCGC	2 cut(s)	138, 188
BstKTI	GATC	7 cut(s)	226, 775, 885, 1204, 1345, 1352, 1367
BstMAI	GTCTC	1 cut(s)	1049
BstMBI	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	4 cut(s)	135, 556, 1133, 1317
BstNI	CCWGG	2 cut(s)	12, 1220
BstNSI	RCATGY	3 cut(s)	436, 830, 1235
BstSCI	CCNGG	3 cut(s)	10, 984, 1218
BstSFI	CTRYAG	1 cut(s)	1338
BstUI	CGCG	2 cut(s)	138, 194
BstV1I	GCAGC	6 cut(s)	175, 545, 619, 884, 1111, 1205
BstV2I	GAAGAC	1 cut(s)	577
BstX2I	RGATCY	1 cut(s)	1342
BstXI	CCANNNNNNTGG	1 cut(s)	822
BstYI	RGATCY	1 cut(s)	1342
BstZI	CGGCCG	1 cut(s)	139
Bsu15I	ATCGAT	1 cut(s)	443
Bsu36I	CCTNAGG	1 cut(s)	662
BsuRI	GGCC	5 cut(s)	10, 129, 141, 989, 1136
BsuTUI	ATCGAT	1 cut(s)	443
BtgZI	GCGATG	1 cut(s)	1374
BtsCI	GGATG	1 cut(s)	418
BtsIMutI	CAGTG	4 cut(s)	101, 381, 1011, 1195
BveI	ACCTGC	4 cut(s)	541, 1174, 1316, 1345
Cac8I	GCNNGC	6 cut(s)	531, 596, 828, 870, 1198, 1233
CaiI	CAGNNNCTG	1 cut(s)	556
CfoI	GCGC	2 cut(s)	138, 188
Cfr13I	GGNCC	6 cut(s)	8, 127, 553, 862, 987, 1305
ClaI	ATCGAT	1 cut(s)	443
Csp6I	GTAC	6 cut(s)	121, 508, 781, 904, 982, 1109
CviAII	CATG	6 cut(s)	284, 433, 737, 827, 844, 1232
CviQI	GTAC	6 cut(s)	121, 508, 781, 904, 982, 1109
DdeI	CTNAG	2 cut(s)	662, 1346
DpnI	GATC	7 cut(s)	225, 774, 884, 1203, 1344, 1351, 1366
DpnII	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
EaeI	YGGCCR	1 cut(s)	139
EagI	CGGCCG	1 cut(s)	139
Ecl136II	GAGCTC	2 cut(s)	41, 54
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	1 cut(s)	858
Eco147I	AGGCCT	1 cut(s)	1136
Eco24I	GRGCYC	3 cut(s)	43, 56, 368
Eco32I	GATATC	1 cut(s)	658
Eco47I	GGWCC	3 cut(s)	553, 862, 1305
Eco47III	AGCGCT	1 cut(s)	187
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	2 cut(s)	41, 54
Eco81I	CCTNAGG	1 cut(s)	662
Eco88I	CYCGRG	1 cut(s)	124
EcoICRI	GAGCTC	2 cut(s)	41, 54
EcoO109I	RGGNCCY	1 cut(s)	553
EcoRII	CCWGG	2 cut(s)	10, 1218
EcoRV	GATATC	1 cut(s)	658
EcoT14I	CCWWGG	1 cut(s)	858
EcoT22I	ATGCAT	1 cut(s)	1233
EcoT38I	GRGCYC	3 cut(s)	43, 56, 368
ErhI	CCWWGG	1 cut(s)	858
FaeI	CATG	6 cut(s)	287, 436, 740, 830, 847, 1235
FaqI	GGGAC	1 cut(s)	192
FatI	CATG	6 cut(s)	283, 432, 736, 826, 843, 1231
FbaI	TGATCA	1 cut(s)	882
Fnu4HI	GCNGC	8 cut(s)	139, 189, 192, 534, 633, 873, 1125, 1194
FokI	GGATG	1 cut(s)	425
FriOI	GRGCYC	3 cut(s)	43, 56, 368
Fsp4HI	GCNGC	8 cut(s)	139, 189, 192, 534, 633, 873, 1125, 1194
FspBI	CTAG	4 cut(s)	57, 357, 537, 707
GlaI	GCGC	2 cut(s)	137, 187
GluI	GCNGC	8 cut(s)	139, 189, 192, 534, 633, 873, 1125, 1194
GsaI	CCCAGC	1 cut(s)	486
GsuI	CTGGAG	2 cut(s)	137, 444
HaeII	RGCGCY	1 cut(s)	189
HaeIII	GGCC	5 cut(s)	10, 129, 141, 989, 1136
HapII	CCGG	4 cut(s)	44, 342, 865, 985
HhaI	GCGC	2 cut(s)	138, 188
Hin1II	CATG	6 cut(s)	287, 436, 740, 830, 847, 1235
Hin6I	GCGC	2 cut(s)	136, 186
HinP1I	GCGC	2 cut(s)	136, 186
HindIII	AAGCTT	1 cut(s)	1085
HinfI	GANTC	3 cut(s)	29, 164, 500
HpaII	CCGG	4 cut(s)	44, 342, 865, 985
HphI	GGTGA	3 cut(s)	143, 485, 892
Hpy166II	GTNNAC	3 cut(s)	751, 1156, 1256
Hpy188I	TCNGA	4 cut(s)	385, 765, 1180, 1285
Hpy188III	TCNNGA	6 cut(s)	26, 57, 342, 423, 625, 1024
Hpy8I	GTNNAC	3 cut(s)	751, 1156, 1256
HpyAV	CCTTC	7 cut(s)	140, 287, 422, 676, 1090, 1099, 1126
HpyCH4III	ACNGT	5 cut(s)	105, 215, 318, 376, 1277
HpyCH4IV	ACGT	4 cut(s)	181, 925, 1091, 1144
HpyCH4V	TGCA	9 cut(s)	269, 604, 725, 1127, 1172, 1193, 1231, 1320, 1340
HpyF10VI	GCNNNNNNNGC	4 cut(s)	135, 556, 1133, 1317
HpyF3I	CTNAG	2 cut(s)	662, 1346
HpySE526I	ACGT	4 cut(s)	181, 925, 1091, 1144
Hsp92II	CATG	6 cut(s)	287, 436, 740, 830, 847, 1235
HspAI	GCGC	2 cut(s)	136, 186
Kpn2I	TCCGGA	1 cut(s)	341
Ksp22I	TGATCA	1 cut(s)	882
Kzo9I	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
LmnI	GCTCC	4 cut(s)	46, 202, 274, 1240
Lsp1109I	GCAGC	6 cut(s)	175, 545, 619, 884, 1111, 1205
LweI	GCATC	1 cut(s)	723
MaeI	CTAG	4 cut(s)	57, 357, 537, 707
MaeII	ACGT	4 cut(s)	181, 925, 1091, 1144
MaeIII	GTNAC	7 cut(s)	149, 370, 435, 616, 926, 993, 1140
MalI	GATC	7 cut(s)	225, 774, 884, 1203, 1344, 1351, 1366
MboI	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
MboII	GAAGA	7 cut(s)	72, 495, 577, 1012, 1044, 1255, 1372
MflI	RGATCY	1 cut(s)	1342
MhlI	GDGCHC	4 cut(s)	43, 56, 207, 368
MluCI	AATT	2 cut(s)	85, 261
MlyI	GAGTC	2 cut(s)	23, 173
MmeI	TCCRAC	1 cut(s)	292
Mph1103I	ATGCAT	1 cut(s)	1233
MroI	TCCGGA	1 cut(s)	341
MseI	TTAA	4 cut(s)	645, 849, 899, 1393
MslI	CAYNNNNRTG	1 cut(s)	1006
MspA1I	CMGCKG	2 cut(s)	1196, 1387
MspI	CCGG	4 cut(s)	44, 342, 865, 985
MspR9I	CCNGG	3 cut(s)	12, 986, 1220
Mva1269I	GAATGC	2 cut(s)	75, 725
MvaI	CCWGG	2 cut(s)	12, 1220
MvnI	CGCG	2 cut(s)	138, 194
MwoI	GCNNNNNNNGC	4 cut(s)	135, 556, 1133, 1317
NciI	CCSGG	1 cut(s)	986
NdeII	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
NlaIII	CATG	6 cut(s)	287, 436, 740, 830, 847, 1235
NlaIV	GGNNCC	1 cut(s)	99
NmeAIII	GCCGAG	1 cut(s)	187
NmuCI	GTSAC	3 cut(s)	149, 435, 1140
NsiI	ATGCAT	1 cut(s)	1233
NspI	RCATGY	3 cut(s)	436, 830, 1235
OliI	CACNNNNGTG	1 cut(s)	1006
PaeI	GCATGC	2 cut(s)	830, 1235
PceI	AGGCCT	1 cut(s)	1136
PcsI	WCGNNNNNNNCGW	1 cut(s)	931
PctI	GAATGC	2 cut(s)	75, 725
PfeI	GAWTC	1 cut(s)	500
PkrI	GCNGC	8 cut(s)	140, 190, 193, 535, 634, 874, 1126, 1195
PleI	GAGTC	2 cut(s)	23, 172
PpsI	GAGTC	2 cut(s)	23, 172
Ppu21I	YACGTR	1 cut(s)	1145
PpuMI	RGGWCCY	1 cut(s)	553
PshBI	ATTAAT	1 cut(s)	899
Psp124BI	GAGCTC	2 cut(s)	43, 56
Psp5II	RGGWCCY	1 cut(s)	553
Psp6I	CCWGG	2 cut(s)	10, 1218
PspFI	CCCAGC	1 cut(s)	482
PspGI	CCWGG	2 cut(s)	10, 1218
PspN4I	GGNNCC	1 cut(s)	99
PspPI	GGNCC	6 cut(s)	8, 127, 553, 862, 987, 1305
PspPPI	RGGWCCY	1 cut(s)	553
PstI	CTGCAG	1 cut(s)	1342
PstNI	CAGNNNCTG	1 cut(s)	556
PsuI	RGATCY	1 cut(s)	1342
PvuII	CAGCTG	2 cut(s)	1196, 1387
RsaI	GTAC	6 cut(s)	122, 509, 782, 905, 983, 1110
RsaNI	GTAC	6 cut(s)	121, 508, 781, 904, 982, 1109
RseI	CAYNNNNRTG	1 cut(s)	1006
SacI	GAGCTC	2 cut(s)	43, 56
SaqAI	TTAA	4 cut(s)	645, 849, 899, 1393
SatI	GCNGC	8 cut(s)	139, 189, 192, 534, 633, 873, 1125, 1194
Sau3AI	GATC	7 cut(s)	223, 772, 882, 1201, 1342, 1349, 1364
Sau96I	GGNCC	6 cut(s)	8, 127, 553, 862, 987, 1305
ScaI	AGTACT	1 cut(s)	122
SchI	GAGTC	2 cut(s)	23, 173
ScrFI	CCNGG	3 cut(s)	12, 986, 1220
SduI	GDGCHC	4 cut(s)	43, 56, 207, 368
SfaNI	GCATC	1 cut(s)	723
SfcI	CTRYAG	1 cut(s)	1338
SinI	GGWCC	3 cut(s)	553, 862, 1305
SmiMI	CAYNNNNRTG	1 cut(s)	1006
SphI	GCATGC	2 cut(s)	830, 1235
Sse9I	AATT	2 cut(s)	85, 261
SseBI	AGGCCT	1 cut(s)	1136
SsiI	CCGC	2 cut(s)	138, 192
SspMI	CTAG	4 cut(s)	57, 357, 537, 707
SstI	GAGCTC	2 cut(s)	43, 56
StuI	AGGCCT	1 cut(s)	1136
StyD4I	CCNGG	3 cut(s)	10, 984, 1218
StyI	CCWWGG	1 cut(s)	858
TaaI	ACNGT	5 cut(s)	105, 215, 318, 376, 1277
TaiI	ACGT	4 cut(s)	184, 928, 1094, 1147
TaqI	TCGA	5 cut(s)	50, 230, 251, 443, 650
TasI	AATT	2 cut(s)	85, 261
TatI	WGTACW	2 cut(s)	120, 903
TauI	GCSGC	2 cut(s)	141, 194
TfiI	GAWTC	1 cut(s)	500
Tru1I	TTAA	4 cut(s)	645, 849, 899, 1393
Tru9I	TTAA	4 cut(s)	645, 849, 899, 1393
TscAI	CASTG	4 cut(s)	108, 381, 1011, 1195
TseFI	GTSAC	3 cut(s)	149, 435, 1140
TseI	GCWGC	6 cut(s)	188, 533, 632, 872, 1124, 1193
Tsp45I	GTSAC	3 cut(s)	149, 435, 1140
TspDTI	ATGAA	2 cut(s)	577, 725
TspGWI	ACGGA	2 cut(s)	425, 1318
TspRI	CASTG	4 cut(s)	108, 381, 1011, 1195
VpaK11BI	GGWCC	3 cut(s)	553, 862, 1305
VspI	ATTAAT	1 cut(s)	899
XbaI	TCTAGA	1 cut(s)	56
XceI	RCATGY	3 cut(s)	436, 830, 1235
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1005
XspI	CTAG	4 cut(s)	57, 357, 537, 707
ZrmI	AGTACT	1 cut(s)	122
Zsp2I	ATGCAT	1 cut(s)	1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.