Rmu_sc0004642.1_g000024
BHLH Family

basic helix-loop-helix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004642.1
OG0010418
Physical Location & Seq
Reverse (-)
102244 .. 107327
5084 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2382 bp
atggctacaccgccaccgagtagtagcaggctccgtggcatgttacagtccgcagtgcaatctgttcaatggacttacagtctcttttggcaaatctgtccccaacaagggatgttaatatgggcagatgggtattacaatggggcaatcaagacgaggaagactgtgcagcctatggaagtgagctctgaggaggcatctcttcaaaggagccaacagcttagagagctctacgactcactgtccgccggagaaacaaaccagccagctcgccgcccttgtgctgccttgtccccggaggacttaactgagtcagaatggttctacttgatgtgtgtatctttctcatttcccccgggagttgggttgccgggaaaagcatacacaaggaggcaacacgtatggctcactggtgcaaatgaagtagatagcaaaaccttctccagagctattttagccaagagtgctcgcgttcaaactgtagtgtgtattcctctcttagacggcgtcgttgagctaggcacaacagatagggttccagaagaccttgccttcgtccaacacgtcaaaactttcttcgtcgaccaccaccaccttccaccaccaaagccagccctctcggagcactccacctccaaccccgccacgtcctccgaccaccacccccgtttccactctccacatctcaccgccatccgcaacaacgctgccgcaaacaacgccccgcccctccacgcagccgcccaagaagacgaagaggacgaggacgaggaagaagacgaccaggacgaagaaggagagtccgactccgaagccgaaaccggccgtaacggtcgtcctctcgctttcttcgtcgaccaccaccaccttccaccaccaaagccagccctctcggagcactccacctccaaccccgccacgtcctccgaccaccacccccgtttccactctccacatctcaccgccatccgcaacaacgctgccgcaaacaacgccccgcccctccacgcagccgcccaagaagacgaagaggacgaggacgaggaagaagacgaccaggacgaagaaggagagtccgactccgaagccgagaccggccgtaacggtcgtcctctcgctgctgctgctggacccaacgttcccgcagccgagccgagcgagctcatgcagctcgaaatgtccgaagacatccgcctcggctcccccgacgacgcctccaacaacttggactcggacttccacatgctggccgtcagccagtccgccaacgcctccaatcagcagcgccaagcagactcgtatcgagccgagtcgacccggcggtggccgccggtccaaccgccaatgacagctgtccaaccacctccctcaggaccgctggcattggaggaattgacccacgacgacacacactattcggaaacagtgtcgaccattcttcaaacccaagctacccggtggaccgattcgtcgtccaatgactacgtcacctactccacccaatcagctttcgccaagtggacgagccgggctgaccaccacctcttggttcccgtcgagggcacatcccagtggctcctaaagtacattttgtttagtgtaccgttcctacatacgaaatatcgggacgagaattcccccaagtctcacgacgtcgacggctcgagccgattgaggaaggggacgtcacaagacgagctaagtgctaaccatgtgttagcggagcggcgtcgtagagagaagcttaatgagaggtttattatattgaggtctttggtgccttttgtgacaaaaatggacaaggcctccattttgggggatacgatcgagtacgtgaagcaactgcgcaagaagattcaggatctcgaggcacgtaacgtgcatttggaggacgatcaacggacgagatcggcgggggagatgcaacggtcgactagcatgaaagagttacggagcgggctcacggtgacggaacgctcccatgtgggcctgcccgggtcggacaagaggaagttgaggattgtggagggcagtggcggagcggcgatcgctaagcctaaagtgatagaggaaccgacaccacctccaccaccaccggccccggaaccggccccgccaacgcccatgttgacggggacatctctagaagtgtcgataatagagagcgatggattgttggagctccaatgcccgtacagagaagggttattacttgatgtcatgcaaaccctacgagatctccgaattgagaccacggttgtgcaatcctcgttgaatagtggcaccttcgtagctgagctaagggccaaggtgggcaagaaaacaaccattacagaagtgaagagggcagtaaatcaagtgataccccaatctgactcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

793

Amino Acids

87.73

Weight (kDa)

5.18

Isoelectric Point (pI)

63.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 11 - 193 4.8e-53 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 569 - 616 8.2e-13 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 715 - 788 3.7e-15 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1468
AatII GACGTC 2 cut(s) 1656, 1688
Acc16I TGCGCA 1 cut(s) 1847
AccB1I GGYRCC 2 cut(s) 1777, 2282
AccB7I CCANNNNNTGG 2 cut(s) 1246, 1546
AccBSI CCGCTC 3 cut(s) 1726, 1956, 2042
AccI GTMKAC 6 cut(s) 582, 855, 1313, 1430, 1656, 1931
AccII CGCG 1 cut(s) 471
AclI AACGTT 1 cut(s) 1137
AclWI GGATC 1 cut(s) 1869
AcoI YGGCCR 4 cut(s) 823, 1096, 1248, 1325
AcsI RAATTY 1 cut(s) 1633
AcyI GRCGYC 5 cut(s) 507, 1212, 1653, 1685, 1729
AfaI GTAC 4 cut(s) 1586, 1602, 1832, 2195
AflIII ACRYGT 2 cut(s) 397, 562
AgsI TTSAA 5 cut(s) 68, 206, 476, 1442, 2275
AhdI GACNNNNNGTC 2 cut(s) 78, 241
AjiI CACGTC 3 cut(s) 565, 648, 921
AjnI CCWGG 2 cut(s) 783, 1056
AleI CACNNNNGTG 1 cut(s) 2258
AloI GAACNNNNNNTCC 2 cut(s) 1122, 1154
Alw21I GWGCWC 7 cut(s) 188, 231, 469, 627, 900, 1164, 2184
Alw26I GTCTC 4 cut(s) 86, 1085, 1650, 2243
AlwI GGATC 1 cut(s) 1869
Ama87I CYCGRG 4 cut(s) 355, 1663, 1865, 1994
AoxI GGCC 9 cut(s) 823, 1096, 1248, 1325, 1803, 1987, 2097, 2109, 2304
ApoI RAATTY 1 cut(s) 1633
ArsI GACNNNNNNTTYG 2 cut(s) 536, 568
AsiSI GCGATCGC 1 cut(s) 2049
AspLEI GCGC 2 cut(s) 1287, 1848
AspS9I GGNCC 8 cut(s) 1130, 1333, 1373, 1461, 1987, 2098, 2110, 2304
AsuHPI GGTGA 4 cut(s) 679, 952, 1480, 1978
AvaI CYCGRG 4 cut(s) 355, 1663, 1865, 1994
AvaII GGWCC 4 cut(s) 1130, 1333, 1373, 1461
AxyI CCTNAGG 1 cut(s) 1369
BaeGI GKGCMC 1 cut(s) 1565
BanI GGYRCC 2 cut(s) 1777, 2282
BanII GRGCYC 5 cut(s) 188, 231, 1164, 1962, 2184
BarI GAAGNNNNNNTAC 2 cut(s) 2193, 2225
BbsI GAAGAC 7 cut(s) 167, 549, 756, 783, 1029, 1056, 1191
Bbv12I GWGCWC 7 cut(s) 188, 231, 469, 627, 900, 1164, 2184
BccI CCATC 4 cut(s) 122, 701, 974, 2162
BceAI ACGGC 5 cut(s) 520, 810, 1083, 1235, 1675
BcgI CGANNNNNNTGC 2 cut(s) 1685, 1719
BciT130I CCWGG 2 cut(s) 785, 1058
BciVI GTATCC 1 cut(s) 1813
BcoDI GTCTC 4 cut(s) 86, 1085, 1650, 2243
BfaI CTAG 3 cut(s) 518, 1935, 2144
BfmI CTRYAG 1 cut(s) 480
BfoI RGCGCY 1 cut(s) 1288
BfuI GTATCC 1 cut(s) 1813
BglII AGATCT 1 cut(s) 2236
BlpI GCTNAGC 2 cut(s) 2052, 2295
Bme18I GGWCC 4 cut(s) 1130, 1333, 1373, 1461
BmeRI GACNNNNNGTC 2 cut(s) 78, 241
BmeT110I CYCGRG 4 cut(s) 355, 1663, 1865, 1994
BmgBI CACGTC 3 cut(s) 565, 648, 921
BmgT120I GGNCC 8 cut(s) 1130, 1333, 1373, 1461, 1987, 2098, 2110, 2304
BmrI ACTGGG 1 cut(s) 1564
BmsI GCATC 2 cut(s) 206, 1911
BmuI ACTGGG 1 cut(s) 1564
BoxI GACNNNNGTC 1 cut(s) 1352
BpiI GAAGAC 7 cut(s) 167, 549, 756, 783, 1029, 1056, 1191
BplI GAGNNNNNCTC 4 cut(s) 791, 823, 1064, 1096
BpmI CTGGAG 1 cut(s) 427
Bpu10I CCTNAGC 1 cut(s) 2300
Bpu1102I GCTNAGC 2 cut(s) 2052, 2295
BsaAI YACGTR 3 cut(s) 400, 1834, 1874
BsaHI GRCGYC 5 cut(s) 507, 1212, 1653, 1685, 1729
BsaI GGTCTC 2 cut(s) 1085, 2243
BsaJI CCNNGG 9 cut(s) 34, 294, 354, 355, 1195, 1994, 2100, 2253, 2307
Bse118I RCCGGY 5 cut(s) 821, 1094, 1330, 2095, 2107
Bse1I ACTGG 3 cut(s) 415, 1258, 1570
Bse21I CCTNAGG 1 cut(s) 1369
BseBI CCWGG 2 cut(s) 785, 1058
BseDI CCNNGG 9 cut(s) 34, 294, 354, 355, 1195, 1994, 2100, 2253, 2307
BseGI GGATG 5 cut(s) 117, 693, 966, 1188, 1565
BseMII CTCAG 4 cut(s) 180, 300, 1383, 2286
BseNI ACTGG 3 cut(s) 415, 1258, 1570
BseRI GAGGAG 1 cut(s) 206
BseSI GKGCMC 1 cut(s) 1565
BseX3I CGGCCG 2 cut(s) 823, 1096
BsgI GTGCAG 1 cut(s) 188
Bsh1236I CGCG 1 cut(s) 471
Bsh1285I CGRYCG 7 cut(s) 826, 835, 1099, 1108, 1827, 1931, 2049
BshFI GGCC 9 cut(s) 825, 1098, 1250, 1327, 1805, 1989, 2099, 2111, 2306
BshNI GGYRCC 2 cut(s) 1777, 2282
BsiEI CGRYCG 7 cut(s) 826, 835, 1099, 1108, 1827, 1931, 2049
BsiHKAI GWGCWC 7 cut(s) 188, 231, 469, 627, 900, 1164, 2184
BsiHKCI CYCGRG 4 cut(s) 355, 1663, 1865, 1994
BslFI GGGAC 5 cut(s) 84, 277, 1640, 1696, 2149
BsmAI GTCTC 4 cut(s) 86, 1085, 1650, 2243
BsmFI GGGAC 5 cut(s) 84, 277, 1640, 1696, 2149
BsnI GGCC 9 cut(s) 825, 1098, 1250, 1327, 1805, 1989, 2099, 2111, 2306
Bso31I GGTCTC 2 cut(s) 1085, 2243
BsoBI CYCGRG 4 cut(s) 355, 1663, 1865, 1994
Bsp1286I GDGCHC 9 cut(s) 188, 231, 469, 627, 900, 1164, 1565, 1962, 2184
Bsp143I GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
Bsp1720I GCTNAGC 2 cut(s) 2052, 2295
BspANI GGCC 9 cut(s) 825, 1098, 1250, 1327, 1805, 1989, 2099, 2111, 2306
BspCNI CTCAG 4 cut(s) 181, 301, 1382, 2287
BspFNI CGCG 1 cut(s) 471
BspPI GGATC 1 cut(s) 1869
BspT107I GGYRCC 2 cut(s) 1777, 2282
BspTNI GGTCTC 2 cut(s) 1085, 2243
BsrBI CCGCTC 3 cut(s) 1726, 1956, 2042
BsrFI RCCGGY 5 cut(s) 821, 1094, 1330, 2095, 2107
BsrI ACTGG 3 cut(s) 415, 1258, 1570
BssAI RCCGGY 5 cut(s) 821, 1094, 1330, 2095, 2107
BssECI CCNNGG 9 cut(s) 34, 294, 354, 355, 1195, 1994, 2100, 2253, 2307
BssMI GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
BssNI GRCGYC 5 cut(s) 507, 1212, 1653, 1685, 1729
BssT1I CCWWGG 1 cut(s) 2307
Bst2UI CCWGG 2 cut(s) 785, 1058
Bst6I CTCTTC 4 cut(s) 207, 750, 1023, 2336
BstACI GRCGYC 5 cut(s) 507, 1212, 1653, 1685, 1729
BstBAI YACGTR 3 cut(s) 400, 1834, 1874
BstDEI CTNAG 9 cut(s) 189, 221, 309, 499, 1369, 1700, 2052, 2295, 2300
BstDSI CCRYGG 2 cut(s) 34, 2253
BstENI CCTNNNNNAGG 1 cut(s) 1368
BstF5I GGATG 5 cut(s) 117, 693, 966, 1188, 1565
BstFNI CGCG 1 cut(s) 471
BstH2I RGCGCY 1 cut(s) 1288
BstHHI GCGC 2 cut(s) 1287, 1848
BstKTI GATC 6 cut(s) 1827, 1864, 1897, 1910, 2049, 2239
BstMAI GTCTC 4 cut(s) 86, 1085, 1650, 2243
BstMBI GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
BstMCI CGRYCG 7 cut(s) 826, 835, 1099, 1108, 1827, 1931, 2049
BstNI CCWGG 2 cut(s) 785, 1058
BstNSI RCATGY 2 cut(s) 43, 1246
BstPAI GACNNNNGTC 1 cut(s) 1352
BstSFI CTRYAG 1 cut(s) 480
BstSLI GKGCMC 1 cut(s) 1565
BstUI CGCG 1 cut(s) 471
BstV2I GAAGAC 7 cut(s) 167, 549, 756, 783, 1029, 1056, 1191
BstX2I RGATCY 2 cut(s) 1861, 2236
BstXI CCANNNNNNTGG 1 cut(s) 1225
BstYI RGATCY 2 cut(s) 1861, 2236
BstZI CGGCCG 2 cut(s) 823, 1096
Bsu36I CCTNAGG 1 cut(s) 1369
BsuI GTATCC 1 cut(s) 1813
BsuRI GGCC 9 cut(s) 825, 1098, 1250, 1327, 1805, 1989, 2099, 2111, 2306
BtgI CCRYGG 2 cut(s) 34, 2253
BtgZI GCGATG 1 cut(s) 2181
BtrI CACGTC 3 cut(s) 565, 648, 921
BtsCI GGATG 5 cut(s) 117, 693, 966, 1188, 1565
BtsI GCAGTG 2 cut(s) 60, 2038
BtsIMutI CAGTG 6 cut(s) 60, 239, 408, 1431, 1577, 2038
CfoI GCGC 2 cut(s) 1287, 1848
Cfr10I RCCGGY 5 cut(s) 821, 1094, 1330, 2095, 2107
Cfr13I GGNCC 8 cut(s) 1130, 1333, 1373, 1461, 1987, 2098, 2110, 2304
Cfr9I CCCGGG 2 cut(s) 355, 1994
CseI GACGC 3 cut(s) 496, 1220, 1718
Csp6I GTAC 4 cut(s) 1585, 1601, 1831, 2194
CviAII CATG 8 cut(s) 40, 1165, 1243, 1712, 1939, 1982, 2125, 2221
CviQI GTAC 4 cut(s) 1585, 1601, 1831, 2194
DdeI CTNAG 9 cut(s) 189, 221, 309, 499, 1369, 1700, 2052, 2295, 2300
DpnI GATC 6 cut(s) 1826, 1863, 1896, 1909, 2048, 2238
DpnII GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
DrdI GACNNNNNNGTC 1 cut(s) 1468
DriI GACNNNNNGTC 2 cut(s) 78, 241
DseDI GACNNNNNNGTC 1 cut(s) 1468
EaeI YGGCCR 4 cut(s) 823, 1096, 1248, 1325
EagI CGGCCG 2 cut(s) 823, 1096
Eam1104I CTCTTC 4 cut(s) 207, 750, 1023, 2336
Eam1105I GACNNNNNGTC 2 cut(s) 78, 241
EarI CTCTTC 4 cut(s) 207, 750, 1023, 2336
EciI GGCGGA 4 cut(s) 235, 1181, 1252, 2052
Ecl136II GAGCTC 4 cut(s) 186, 229, 1162, 2182
EclXI CGGCCG 2 cut(s) 823, 1096
Eco130I CCWWGG 1 cut(s) 2307
Eco147I AGGCCT 1 cut(s) 1805
Eco24I GRGCYC 5 cut(s) 188, 231, 1164, 1962, 2184
Eco31I GGTCTC 2 cut(s) 1085, 2243
Eco47I GGWCC 4 cut(s) 1130, 1333, 1373, 1461
Eco52I CGGCCG 2 cut(s) 823, 1096
Eco53kI GAGCTC 4 cut(s) 186, 229, 1162, 2182
Eco81I CCTNAGG 1 cut(s) 1369
Eco88I CYCGRG 4 cut(s) 355, 1663, 1865, 1994
EcoICRI GAGCTC 4 cut(s) 186, 229, 1162, 2182
EcoNI CCTNNNNNAGG 1 cut(s) 1368
EcoRI GAATTC 1 cut(s) 1633
EcoRII CCWGG 2 cut(s) 783, 1056
EcoT14I CCWWGG 1 cut(s) 2307
EcoT38I GRGCYC 5 cut(s) 188, 231, 1164, 1962, 2184
ErhI CCWWGG 1 cut(s) 2307
FaeI CATG 8 cut(s) 43, 1168, 1246, 1715, 1942, 1985, 2128, 2224
FaqI GGGAC 5 cut(s) 84, 277, 1640, 1696, 2149
FatI CATG 8 cut(s) 39, 1164, 1242, 1711, 1938, 1981, 2124, 2220
FauI CCCGC 8 cut(s) 649, 732, 922, 1005, 1150, 1906, 1949, 2121
FblI GTMKAC 6 cut(s) 582, 855, 1313, 1430, 1656, 1931
FokI GGATG 5 cut(s) 124, 680, 953, 1175, 1552
FriOI GRGCYC 5 cut(s) 188, 231, 1164, 1962, 2184
FspBI CTAG 3 cut(s) 518, 1935, 2144
FspI TGCGCA 1 cut(s) 1847
GlaI GCGC 2 cut(s) 1286, 1847
GsuI CTGGAG 1 cut(s) 427
HaeII RGCGCY 1 cut(s) 1288
HaeIII GGCC 9 cut(s) 825, 1098, 1250, 1327, 1805, 1989, 2099, 2111, 2306
HgaI GACGC 3 cut(s) 496, 1220, 1718
HhaI GCGC 2 cut(s) 1287, 1848
Hin1I GRCGYC 5 cut(s) 507, 1212, 1653, 1685, 1729
Hin1II CATG 8 cut(s) 43, 1168, 1246, 1715, 1942, 1985, 2128, 2224
Hin6I GCGC 2 cut(s) 1285, 1846
HinP1I GCGC 2 cut(s) 1285, 1846
HincII GTYRAC 7 cut(s) 583, 856, 1314, 1431, 1657, 1932, 2130
HindII GTYRAC 7 cut(s) 583, 856, 1314, 1431, 1657, 1932, 2130
HindIII AAGCTT 1 cut(s) 1742
HphI GGTGA 4 cut(s) 679, 952, 1480, 1978
Hpy188III TCNNGA 9 cut(s) 151, 444, 539, 1371, 1625, 1649, 1859, 1865, 2144
HpyAV CCTTC 9 cut(s) 448, 562, 605, 788, 878, 1061, 1672, 2195, 2296
HpyCH4V TGCA 8 cut(s) 58, 169, 416, 1168, 1882, 1924, 2224, 2263
HpyF3I CTNAG 9 cut(s) 189, 221, 309, 499, 1369, 1700, 2052, 2295, 2300
Hsp92I GRCGYC 5 cut(s) 507, 1212, 1653, 1685, 1729
Hsp92II CATG 8 cut(s) 43, 1168, 1246, 1715, 1942, 1985, 2128, 2224
HspAI GCGC 2 cut(s) 1285, 1846
Kzo9I GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
LweI GCATC 2 cut(s) 206, 1911
MaeI CTAG 3 cut(s) 518, 1935, 2144
MaeIII GTNAC 9 cut(s) 42, 827, 1100, 1486, 1686, 1786, 1874, 1947, 1966
MalI GATC 6 cut(s) 1826, 1863, 1896, 1909, 2048, 2238
MbiI CCGCTC 3 cut(s) 1726, 1956, 2042
MboI GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
MflI RGATCY 2 cut(s) 1861, 2236
MhlI GDGCHC 9 cut(s) 188, 231, 469, 627, 900, 1164, 1565, 1962, 2184
MluCI AATT 3 cut(s) 1391, 1633, 2244
MseI TTAA 4 cut(s) 116, 305, 1746, 2380
MslI CAYNNNNRTG 2 cut(s) 1570, 2258
MspA1I CMGCKG 2 cut(s) 1352, 1378
MvaI CCWGG 2 cut(s) 785, 1058
MvnI CGCG 1 cut(s) 471
NdeII GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
NlaIII CATG 8 cut(s) 43, 1168, 1246, 1715, 1942, 1985, 2128, 2224
NmeAIII GCCGAG 5 cut(s) 1114, 1174, 1176, 1179, 1333
NmuCI GTSAC 4 cut(s) 1486, 1686, 1786, 1966
NsbI TGCGCA 1 cut(s) 1847
NspI RCATGY 2 cut(s) 43, 1246
OliI CACNNNNGTG 1 cut(s) 2258
PaeR7I CTCGAG 2 cut(s) 1663, 1865
PceI AGGCCT 1 cut(s) 1805
PcsI WCGNNNNNNNCGW 9 cut(s) 561, 759, 786, 849, 1032, 1059, 1179, 1203, 2239
PfeI GAWTC 2 cut(s) 1466, 1855
PflFI GACNNNGTC 2 cut(s) 506, 1484
PflMI CCANNNNNTGG 2 cut(s) 1246, 1546
Ple19I CGATCG 2 cut(s) 1827, 2049
Ppu21I YACGTR 3 cut(s) 400, 1834, 1874
PshAI GACNNNNGTC 1 cut(s) 1352
Psp124BI GAGCTC 4 cut(s) 188, 231, 1164, 2184
Psp1406I AACGTT 1 cut(s) 1137
Psp6I CCWGG 2 cut(s) 783, 1056
PspGI CCWGG 2 cut(s) 783, 1056
PspPI GGNCC 8 cut(s) 1130, 1333, 1373, 1461, 1987, 2098, 2110, 2304
PspXI VCTCGAGB 1 cut(s) 1663
PsuI RGATCY 2 cut(s) 1861, 2236
PsyI GACNNNGTC 2 cut(s) 506, 1484
PvuI CGATCG 2 cut(s) 1827, 2049
PvuII CAGCTG 1 cut(s) 1352
RgaI GCGATCGC 1 cut(s) 2049
RsaI GTAC 4 cut(s) 1586, 1602, 1832, 2195
RsaNI GTAC 4 cut(s) 1585, 1601, 1831, 2194
RseI CAYNNNNRTG 2 cut(s) 1570, 2258
SacI GAGCTC 4 cut(s) 188, 231, 1164, 2184
SalI GTCGAC 6 cut(s) 581, 854, 1312, 1429, 1655, 1930
SaqAI TTAA 4 cut(s) 116, 305, 1746, 2380
Sau3AI GATC 6 cut(s) 1824, 1861, 1894, 1907, 2046, 2236
Sau96I GGNCC 8 cut(s) 1130, 1333, 1373, 1461, 1987, 2098, 2110, 2304
SduI GDGCHC 9 cut(s) 188, 231, 469, 627, 900, 1164, 1565, 1962, 2184
SfaAI GCGATCGC 1 cut(s) 2049
SfaNI GCATC 2 cut(s) 206, 1911
SfcI CTRYAG 1 cut(s) 480
Sfr274I CTCGAG 2 cut(s) 1663, 1865
SgfI GCGATCGC 1 cut(s) 2049
SgrDI CGTCGACG 1 cut(s) 1655
SinI GGWCC 4 cut(s) 1130, 1333, 1373, 1461
SlaI CTCGAG 2 cut(s) 1663, 1865
SmaI CCCGGG 2 cut(s) 357, 1996
SmiMI CAYNNNNRTG 2 cut(s) 1570, 2258
SmlI CTYRAG 2 cut(s) 1663, 1865
SmoI CTYRAG 2 cut(s) 1663, 1865
Sse9I AATT 3 cut(s) 1391, 1633, 2244
SseBI AGGCCT 1 cut(s) 1805
SspMI CTAG 3 cut(s) 518, 1935, 2144
SstI GAGCTC 4 cut(s) 188, 231, 1164, 2184
StuI AGGCCT 1 cut(s) 1805
StyI CCWWGG 1 cut(s) 2307
TaqII GACCGA 1 cut(s) 1478
TasI AATT 3 cut(s) 1391, 1633, 2244
TatI WGTACW 1 cut(s) 1584
TauI GCSGC 8 cut(s) 276, 713, 743, 986, 1016, 1330, 1729, 2045
TfiI GAWTC 2 cut(s) 1466, 1855
Tru1I TTAA 4 cut(s) 116, 305, 1746, 2380
Tru9I TTAA 4 cut(s) 116, 305, 1746, 2380
TscAI CASTG 6 cut(s) 60, 246, 415, 1431, 1577, 2038
TseFI GTSAC 4 cut(s) 1486, 1686, 1786, 1966
Tsp45I GTSAC 4 cut(s) 1486, 1686, 1786, 1966
TspDTI ATGAA 2 cut(s) 435, 1955
TspGWI ACGGA 4 cut(s) 23, 1915, 1966, 1985
TspMI CCCGGG 2 cut(s) 355, 1994
TspRI CASTG 6 cut(s) 60, 246, 415, 1431, 1577, 2038
Tth111I GACNNNGTC 2 cut(s) 506, 1484
Van91I CCANNNNNTGG 2 cut(s) 1246, 1546
VpaK11BI GGWCC 4 cut(s) 1130, 1333, 1373, 1461
XagI CCTNNNNNAGG 1 cut(s) 1368
XapI RAATTY 1 cut(s) 1633
XbaI TCTAGA 1 cut(s) 2143
XceI RCATGY 2 cut(s) 43, 1246
XhoI CTCGAG 2 cut(s) 1663, 1865
XmaI CCCGGG 2 cut(s) 355, 1994
XmiI GTMKAC 6 cut(s) 582, 855, 1313, 1430, 1656, 1931
XspI CTAG 3 cut(s) 518, 1935, 2144
ZraI GACGTC 2 cut(s) 1654, 1686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.