Rmu_sc0004920.1_g000001

Histone-like transcription factor (CBF/NF-Y) and archaeal histone

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004920.1
OG0017507
Physical Location & Seq
Reverse (-)
912 .. 3888
2977 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1914 bp
atgtttctgtggcaacggtttggtcttgggttggaggatggtggcgggatctcgaagcagactgatcaatctcgatatgttcttctgggatcggggatgagggcaagagtggagcagcgctggggtggggtttgtcggcgacgggggatggcatcatcggtgcatctgggatctgggcagtggctgggacttcggtttcgtacgttgctgggcataggggggatctgcattgcggcgcggtggtgcagcaagggttggatgcagcgcggctgggtgatggcgcacggaggttgctgggtccatggggggagtggtggttgggccaggcttatgctttggggccttgctggtgggttctggagtcttggtatggtaggtgtgtcgtgtttttcccaggagttcaattcacttttttgtggtcaaagtaatggggaaaagctcctgcacatgatctggcggttttgggtcatggtgttgaagggagtagctttcttcttgaggttggctgtgaggatgtgctttgtttcttgggttagcatggctgaagtgctatggatatggtgttatttccggggactatatgttttactctcaatgttatcttgtggtcaatgtggatgtcacttgctcttgcacgtggtctggctggtttgggtcacggtgttgatgaaggggaagtggttgtttgtaatgttggctgcagggattaatcgtgactctcggaagtggttttatggtgtagcccgagttgaggggcgattaggatggttaggggttgggcccttttggctcatggatgtcattgtggatgacggacccgtaactgaggttgttcttagggaggagagtggagaatttatgtccaccaccgaatttgacactatgaggaagaagcttgatactcgtttccccgcggctcgaattaagaagattatgcaaaccgatgaggatgttgggaagatagctttggctgtgcctctcctggtttcgaaagccttggaactgtttctgcaggatttatgtgaccggacttatgacataaccctcaagaggggagccaagaccatgaattctctgcatttgaagcagtgtgtcaagaccttcagtgtttttgatttcttgaaggatattgtcagtaaggttcctgatctagggggctcggatgctgttggggaggaatgtcctgttgcaaagaggaggaaagtggctgctgacgatgaagacaccgagagtgatgatgagaccaagaggggtaagatgacgaatgacgctggtaatactgttggaagtggccgaggaaggggtagaggcagaggaagggggaggaaagcggttgccgatgatgaagacactgatactgatgatgagtccaagacgagtctgatggtgcatgatgctggtaacaccattggaagtggccggggaagaggaaggggtaggggcaggcctagaggtcgcccacgtggtagtcggacagcagggagggagataagtgcagctaatgagaaatatgaagatgatttggagattgataagcatgaggacaagctcgatgaaccccttgagttgctggatgatgcaacagagcctaaagggtcaaaggaaaacgcttcaggtgacaatagtgcagaaacagctgctcggaattttgatttgaatgtggacttgaatgaaaatgaggattcaacaactacatcagctgctattcctggtcctgttccagctcctgcccctgcccctgttcctgatcctgttcctgctaatcaattatcacagttcacgcctgatatgaagcatgtggaattcctaggttggcctttgacaggcatggaaaagatggccattgatcccatgcaacttgccaatttgactaggaggatagatgaggaagacgaagattatgatgaagattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBFD_NFYB_HMF

Protein Analysis

637

Amino Acids

70.7

Weight (kDa)

6.04

Isoelectric Point (pI)

36.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBFD_NFYB_HMF PF00808 302 - 365 4.8e-18 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017507)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19490
fragaria_vesca FvH4_7g06930
rosa_chinensis RchiOBHm_Chr1g0336861
rosa_laevigata RLG00000029329
rosa_multiflora Rmu_sc0004920.1_g000001
rosa_roxburghii Rroxscaffold_4G00315290
rosa_rugosa Rorug01G0128400
rosa_samantha Rh1AG149200 Rh1BG117300 Rh1CG140400 Rh1DG156500
rosa_wichuraiana Rw1G012070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 238, 267, 914
AciI CCGC 8 cut(s) 45, 233, 238, 267, 457, 912, 914, 1331
AclWI GGATC 6 cut(s) 56, 97, 178, 230, 1742, 1841
AcoI YGGCCR 3 cut(s) 1291, 1417, 1839
AcsI RAATTY 5 cut(s) 854, 872, 1069, 1645, 1802
AcuI CTGAAG 3 cut(s) 564, 1087, 1596
AcvI CACGTG 2 cut(s) 637, 1463
AfaI GTAC 1 cut(s) 202
AfeI AGCGCT 1 cut(s) 119
AfiI CCNNNNNNNGG 6 cut(s) 751, 1050, 1051, 1151, 1300, 1823
AgsI TTSAA 7 cut(s) 403, 478, 1084, 1123, 1657, 1669, 1686
AjnI CCWGG 4 cut(s) 323, 393, 981, 1708
AjuI GAANNNNNNNTTGG 2 cut(s) 950, 982
AluBI AGCT 9 cut(s) 439, 488, 895, 965, 1499, 1549, 1637, 1700, 1724
AluI AGCT 9 cut(s) 439, 488, 895, 965, 1499, 1549, 1637, 1700, 1724
Alw26I GTCTC 1 cut(s) 1235
AlwI GGATC 6 cut(s) 56, 97, 178, 230, 1742, 1841
AlwNI CAGNNNCTG 2 cut(s) 184, 1727
Ama87I CYCGRG 1 cut(s) 744
Aor51HI AGCGCT 1 cut(s) 119
AoxI GGCC 8 cut(s) 321, 340, 779, 1291, 1417, 1445, 1814, 1839
ApaI GGGCCC 1 cut(s) 783
ApeKI GCWGC 8 cut(s) 115, 246, 262, 698, 1208, 1496, 1637, 1700
ApoI RAATTY 5 cut(s) 854, 872, 1069, 1645, 1802
ArsI GACNNNNNNTTYG 2 cut(s) 180, 212
AseI ATTAAT 1 cut(s) 708
Asp700I GAANNNNTTC 1 cut(s) 1005
AspA2I CCTAGG 1 cut(s) 1807
AspLEI GCGC 4 cut(s) 120, 238, 267, 283
AspS9I GGNCC 7 cut(s) 298, 321, 340, 779, 780, 815, 1712
AsuC2I CCSGG 2 cut(s) 572, 1421
AsuHPI GGTGA 2 cut(s) 286, 1628
AsuII TTCGAA 1 cut(s) 989
AvaI CYCGRG 1 cut(s) 744
AvaII GGWCC 3 cut(s) 298, 815, 1712
AvrII CCTAGG 1 cut(s) 1807
BaeGI GKGCMC 1 cut(s) 783
BalI TGGCCA 1 cut(s) 1841
BanII GRGCYC 2 cut(s) 783, 1160
BbrPI CACGTG 2 cut(s) 637, 1463
BbsI GAAGAC 3 cut(s) 1227, 1353, 1896
BbvI GCAGC 8 cut(s) 127, 258, 274, 685, 1195, 1508, 1624, 1687
BccI CCATC 6 cut(s) 32, 142, 271, 759, 1378, 1831
BciT130I CCWGG 4 cut(s) 325, 395, 983, 1710
BclI TGATCA 1 cut(s) 64
BcnI CCSGG 2 cut(s) 572, 1421
BcoDI GTCTC 1 cut(s) 1235
BfaI CTAG 4 cut(s) 1151, 1449, 1808, 1872
BfmI CTRYAG 2 cut(s) 699, 1010
BfoI RGCGCY 1 cut(s) 121
BglI GCCNNNNNGGC 1 cut(s) 787
BlnI CCTAGG 1 cut(s) 1807
Bme1390I CCNGG 6 cut(s) 325, 395, 572, 983, 1421, 1710
Bme18I GGWCC 3 cut(s) 298, 815, 1712
BmeT110I CYCGRG 1 cut(s) 744
BmgT120I GGNCC 7 cut(s) 298, 321, 340, 779, 780, 815, 1712
BmiI GGNNCC 6 cut(s) 299, 341, 781, 817, 1057, 1143
BmrFI CCNGG 6 cut(s) 325, 395, 572, 983, 1421, 1710
BmsI GCATC 6 cut(s) 161, 172, 249, 1153, 1384, 1567
BpiI GAAGAC 3 cut(s) 1227, 1353, 1896
BpmI CTGGAG 1 cut(s) 379
Bpu14I TTCGAA 1 cut(s) 989
BpuEI CTTGAG 3 cut(s) 517, 1031, 1583
BpuMI CCSGG 2 cut(s) 572, 1421
BsaAI YACGTR 2 cut(s) 637, 1463
BsaI GGTCTC 1 cut(s) 1235
BsaJI CCNNGG 8 cut(s) 301, 393, 571, 912, 996, 1294, 1420, 1807
BsaWI WCCGGW 1 cut(s) 1026
BsaXI ACNNNNNCTCC 4 cut(s) 301, 331, 352, 382
Bsc4I CCNNNNNNNGG 6 cut(s) 751, 1050, 1051, 1151, 1300, 1823
Bse3DI GCAATG 1 cut(s) 228
BseBI CCWGG 4 cut(s) 325, 395, 983, 1710
BseDI CCNNGG 8 cut(s) 301, 393, 571, 912, 996, 1294, 1420, 1807
BseLI CCNNNNNNNGG 6 cut(s) 751, 1050, 1051, 1151, 1300, 1823
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 816
BseRI GAGGAG 2 cut(s) 857, 1210
BseSI GKGCMC 1 cut(s) 783
BseXI GCAGC 8 cut(s) 127, 258, 274, 685, 1195, 1508, 1624, 1687
BseYI CCCAGC 5 cut(s) 120, 184, 208, 270, 294
BsgI GTGCAG 4 cut(s) 265, 428, 1515, 1647
Bsh1236I CGCG 3 cut(s) 238, 267, 914
BshFI GGCC 8 cut(s) 323, 342, 781, 1293, 1419, 1447, 1816, 1841
BsiHKCI CYCGRG 1 cut(s) 744
BsiSI CCGG 3 cut(s) 571, 1027, 1420
BsiWI CGTACG 1 cut(s) 200
BslFI GGGAC 2 cut(s) 201, 588
BslI CCNNNNNNNGG 6 cut(s) 751, 1050, 1051, 1151, 1300, 1823
BsmAI GTCTC 1 cut(s) 1235
BsmFI GGGAC 2 cut(s) 201, 588
BsnI GGCC 8 cut(s) 323, 342, 781, 1293, 1419, 1447, 1816, 1841
Bso31I GGTCTC 1 cut(s) 1235
BsoBI CYCGRG 1 cut(s) 744
Bsp119I TTCGAA 1 cut(s) 989
Bsp120I GGGCCC 1 cut(s) 779
Bsp1286I GDGCHC 2 cut(s) 783, 1160
Bsp143I GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 8 cut(s) 45, 233, 238, 267, 457, 912, 914, 1331
BspANI GGCC 8 cut(s) 323, 342, 781, 1293, 1419, 1447, 1816, 1841
BspCNI CTCAG 1 cut(s) 817
BspFNI CGCG 3 cut(s) 238, 267, 914
BspLI GGNNCC 6 cut(s) 299, 341, 781, 817, 1057, 1143
BspMAI CTGCAG 2 cut(s) 703, 1014
BspPI GGATC 6 cut(s) 56, 97, 178, 230, 1742, 1841
BspT104I TTCGAA 1 cut(s) 989
BspTNI GGTCTC 1 cut(s) 1235
BsrDI GCAATG 1 cut(s) 228
BssECI CCNNGG 8 cut(s) 301, 393, 571, 912, 996, 1294, 1420, 1807
BssMI GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
BssT1I CCWWGG 3 cut(s) 301, 996, 1807
Bst2UI CCWGG 4 cut(s) 325, 395, 983, 1710
Bst4CI ACNGT 5 cut(s) 18, 661, 1005, 1282, 1776
Bst6I CTCTTC 1 cut(s) 1420
BstBAI YACGTR 2 cut(s) 637, 1463
BstBI TTCGAA 1 cut(s) 989
BstC8I GCNNGC 1 cut(s) 1445
BstDEI CTNAG 2 cut(s) 825, 836
BstDSI CCRYGG 2 cut(s) 301, 912
BstENI CCTNNNNNAGG 2 cut(s) 1149, 1821
BstFNI CGCG 3 cut(s) 238, 267, 914
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 4 cut(s) 120, 238, 267, 283
BstKTI GATC 9 cut(s) 51, 67, 92, 173, 225, 453, 1150, 1750, 1849
BstMAI GTCTC 1 cut(s) 1235
BstMBI GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
BstMWI GCNNNNNNNGC 3 cut(s) 787, 1084, 1634
BstNI CCWGG 4 cut(s) 325, 395, 983, 1710
BstNSI RCATGY 1 cut(s) 1799
BstSCI CCNGG 6 cut(s) 323, 393, 570, 981, 1419, 1708
BstSFI CTRYAG 2 cut(s) 699, 1010
BstSLI GKGCMC 1 cut(s) 783
BstUI CGCG 3 cut(s) 238, 267, 914
BstV1I GCAGC 8 cut(s) 127, 258, 274, 685, 1195, 1508, 1624, 1687
BstV2I GAAGAC 3 cut(s) 1227, 1353, 1896
BstX2I RGATCY 3 cut(s) 48, 170, 222
BstYI RGATCY 3 cut(s) 48, 170, 222
BsuRI GGCC 8 cut(s) 323, 342, 781, 1293, 1419, 1447, 1816, 1841
BtgI CCRYGG 2 cut(s) 301, 912
BtsI GCAGTG 2 cut(s) 185, 1094
BtsIMutI CAGTG 4 cut(s) 185, 1094, 1111, 1350
Cac8I GCNNGC 1 cut(s) 1445
CaiI CAGNNNCTG 2 cut(s) 184, 1727
CfoI GCGC 4 cut(s) 120, 238, 267, 283
Cfr13I GGNCC 7 cut(s) 298, 321, 340, 779, 780, 815, 1712
Cfr42I CCGCGG 1 cut(s) 915
CseI GACGC 1 cut(s) 1277
Csp6I GTAC 1 cut(s) 201
CspCI CAANNNNNGTGG 2 cut(s) 856, 891
CviQI GTAC 1 cut(s) 201
DdeI CTNAG 2 cut(s) 825, 836
DpnI GATC 9 cut(s) 50, 66, 91, 172, 224, 452, 1149, 1749, 1848
DpnII GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
EaeI YGGCCR 3 cut(s) 1291, 1417, 1839
Eam1104I CTCTTC 1 cut(s) 1420
EarI CTCTTC 1 cut(s) 1420
Eco130I CCWWGG 3 cut(s) 301, 996, 1807
Eco147I AGGCCT 1 cut(s) 1447
Eco24I GRGCYC 2 cut(s) 783, 1160
Eco31I GGTCTC 1 cut(s) 1235
Eco47I GGWCC 3 cut(s) 298, 815, 1712
Eco47III AGCGCT 1 cut(s) 119
Eco57I CTGAAG 3 cut(s) 564, 1087, 1596
Eco72I CACGTG 2 cut(s) 637, 1463
Eco88I CYCGRG 1 cut(s) 744
EcoNI CCTNNNNNAGG 2 cut(s) 1149, 1821
EcoO109I RGGNCCY 2 cut(s) 340, 780
EcoRI GAATTC 2 cut(s) 1069, 1802
EcoRII CCWGG 4 cut(s) 323, 393, 981, 1708
EcoT14I CCWWGG 3 cut(s) 301, 996, 1807
EcoT38I GRGCYC 2 cut(s) 783, 1160
ErhI CCWWGG 3 cut(s) 301, 996, 1807
FaqI GGGAC 2 cut(s) 201, 588
FauI CCCGC 2 cut(s) 38, 919
FbaI TGATCA 1 cut(s) 64
FriOI GRGCYC 2 cut(s) 783, 1160
FspBI CTAG 4 cut(s) 1151, 1449, 1808, 1872
GlaI GCGC 4 cut(s) 119, 237, 266, 282
GsaI CCCAGC 5 cut(s) 124, 188, 212, 274, 298
GsuI CTGGAG 1 cut(s) 379
HaeII RGCGCY 1 cut(s) 121
HaeIII GGCC 8 cut(s) 323, 342, 781, 1293, 1419, 1447, 1816, 1841
HapII CCGG 3 cut(s) 571, 1027, 1420
HgaI GACGC 1 cut(s) 1277
HhaI GCGC 4 cut(s) 120, 238, 267, 283
Hin6I GCGC 4 cut(s) 118, 236, 265, 281
HinP1I GCGC 4 cut(s) 118, 236, 265, 281
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 5 cut(s) 361, 716, 1367, 1378, 1682
HpaII CCGG 3 cut(s) 571, 1027, 1420
HphI GGTGA 2 cut(s) 286, 1628
Hpy166II GTNNAC 3 cut(s) 864, 1663, 1779
Hpy188I TCNGA 5 cut(s) 723, 1162, 1383, 1473, 1644
Hpy8I GTNNAC 3 cut(s) 864, 1663, 1779
Hpy99I CGWCG 1 cut(s) 144
HpyAV CCTTC 7 cut(s) 472, 664, 1111, 1117, 1293, 1311, 1425
HpyCH4III ACNGT 5 cut(s) 18, 661, 1005, 1282, 1776
HpyCH4IV ACGT 3 cut(s) 203, 636, 1462
HpyF10VI GCNNNNNNNGC 3 cut(s) 787, 1084, 1634
HpyF3I CTNAG 2 cut(s) 825, 836
HpySE526I ACGT 3 cut(s) 203, 636, 1462
HspAI GCGC 4 cut(s) 118, 236, 265, 281
Ksp22I TGATCA 1 cut(s) 64
KspI CCGCGG 1 cut(s) 915
Kzo9I GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
LmnI GCTCC 4 cut(s) 112, 444, 1055, 1729
Lsp1109I GCAGC 8 cut(s) 127, 258, 274, 685, 1195, 1508, 1624, 1687
LweI GCATC 6 cut(s) 161, 172, 249, 1153, 1384, 1567
MaeI CTAG 4 cut(s) 1151, 1449, 1808, 1872
MaeII ACGT 3 cut(s) 203, 636, 1462
MaeIII GTNAC 7 cut(s) 620, 655, 713, 820, 1022, 1400, 1616
MalI GATC 9 cut(s) 50, 66, 91, 172, 224, 452, 1149, 1749, 1848
MboI GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
MflI RGATCY 3 cut(s) 48, 170, 222
MhlI GDGCHC 2 cut(s) 783, 1160
MlsI TGGCCA 1 cut(s) 1841
MluCI AATT 9 cut(s) 403, 854, 872, 921, 1069, 1645, 1766, 1802, 1864
MluNI TGGCCA 1 cut(s) 1841
MlyI GAGTC 4 cut(s) 370, 710, 1376, 1387
MmeI TCCRAC 4 cut(s) 12, 236, 1264, 1451
Mox20I TGGCCA 1 cut(s) 1841
MroXI GAANNNNTTC 1 cut(s) 1005
MscI TGGCCA 1 cut(s) 1841
MseI TTAA 2 cut(s) 708, 924
Msp20I TGGCCA 1 cut(s) 1841
MspA1I CMGCKG 3 cut(s) 914, 1637, 1700
MspI CCGG 3 cut(s) 571, 1027, 1420
MspR9I CCNGG 6 cut(s) 325, 395, 572, 983, 1421, 1710
MvaI CCWGG 4 cut(s) 325, 395, 983, 1710
MvnI CGCG 3 cut(s) 238, 267, 914
MwoI GCNNNNNNNGC 3 cut(s) 787, 1084, 1634
NciI CCSGG 2 cut(s) 572, 1421
NcoI CCATGG 1 cut(s) 301
NdeII GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
NlaIV GGNNCC 6 cut(s) 299, 341, 781, 817, 1057, 1143
NmeAIII GCCGAG 1 cut(s) 1319
NmuCI GTSAC 5 cut(s) 620, 655, 713, 1022, 1616
NspI RCATGY 1 cut(s) 1799
NspV TTCGAA 1 cut(s) 989
PceI AGGCCT 1 cut(s) 1447
PdmI GAANNNNTTC 1 cut(s) 1005
PfeI GAWTC 1 cut(s) 1682
Pfl23II CGTACG 1 cut(s) 200
PleI GAGTC 4 cut(s) 369, 710, 1375, 1386
PmaCI CACGTG 2 cut(s) 637, 1463
PmlI CACGTG 2 cut(s) 637, 1463
PpsI GAGTC 4 cut(s) 369, 710, 1375, 1386
Ppu21I YACGTR 2 cut(s) 637, 1463
PshBI ATTAAT 1 cut(s) 708
Psp6I CCWGG 4 cut(s) 323, 393, 981, 1708
PspCI CACGTG 2 cut(s) 637, 1463
PspFI CCCAGC 5 cut(s) 120, 184, 208, 270, 294
PspGI CCWGG 4 cut(s) 323, 393, 981, 1708
PspLI CGTACG 1 cut(s) 200
PspN4I GGNNCC 6 cut(s) 299, 341, 781, 817, 1057, 1143
PspOMI GGGCCC 1 cut(s) 779
PspPI GGNCC 7 cut(s) 298, 321, 340, 779, 780, 815, 1712
PstI CTGCAG 2 cut(s) 703, 1014
PstNI CAGNNNCTG 2 cut(s) 184, 1727
PsuI RGATCY 3 cut(s) 48, 170, 222
PvuII CAGCTG 2 cut(s) 1637, 1700
RsaI GTAC 1 cut(s) 202
RsaNI GTAC 1 cut(s) 201
SacII CCGCGG 1 cut(s) 915
SaqAI TTAA 2 cut(s) 708, 924
Sau3AI GATC 9 cut(s) 48, 64, 89, 170, 222, 450, 1147, 1747, 1846
Sau96I GGNCC 7 cut(s) 298, 321, 340, 779, 780, 815, 1712
SchI GAGTC 4 cut(s) 370, 710, 1376, 1387
ScrFI CCNGG 6 cut(s) 325, 395, 572, 983, 1421, 1710
SduI GDGCHC 2 cut(s) 783, 1160
SfaNI GCATC 6 cut(s) 161, 172, 249, 1153, 1384, 1567
SfcI CTRYAG 2 cut(s) 699, 1010
Sfr303I CCGCGG 1 cut(s) 915
SfuI TTCGAA 1 cut(s) 989
SgrBI CCGCGG 1 cut(s) 915
SinI GGWCC 3 cut(s) 298, 815, 1712
SmlI CTYRAG 3 cut(s) 496, 1046, 1562
SmoI CTYRAG 3 cut(s) 496, 1046, 1562
Sse9I AATT 9 cut(s) 403, 854, 872, 921, 1069, 1645, 1766, 1802, 1864
SseBI AGGCCT 1 cut(s) 1447
SsiI CCGC 8 cut(s) 45, 233, 238, 267, 457, 912, 914, 1331
SspMI CTAG 4 cut(s) 1151, 1449, 1808, 1872
StuI AGGCCT 1 cut(s) 1447
StyD4I CCNGG 6 cut(s) 323, 393, 570, 981, 1419, 1708
StyI CCWWGG 3 cut(s) 301, 996, 1807
TaaI ACNGT 5 cut(s) 18, 661, 1005, 1282, 1776
TaiI ACGT 3 cut(s) 206, 639, 1465
TaqI TCGA 5 cut(s) 53, 73, 919, 989, 1551
TasI AATT 9 cut(s) 403, 854, 872, 921, 1069, 1645, 1766, 1802, 1864
TauI GCSGC 3 cut(s) 236, 270, 917
TfiI GAWTC 1 cut(s) 1682
Tru1I TTAA 2 cut(s) 708, 924
Tru9I TTAA 2 cut(s) 708, 924
TscAI CASTG 4 cut(s) 185, 1094, 1111, 1357
TseFI GTSAC 5 cut(s) 620, 655, 713, 1022, 1616
TseI GCWGC 8 cut(s) 115, 246, 262, 698, 1208, 1496, 1637, 1700
Tsp45I GTSAC 5 cut(s) 620, 655, 713, 1022, 1616
TspDTI ATGAA 8 cut(s) 683, 1082, 1233, 1359, 1527, 1569, 1686, 1805
TspGWI ACGGA 2 cut(s) 300, 828
TspRI CASTG 4 cut(s) 185, 1094, 1111, 1357
VpaK11BI GGWCC 3 cut(s) 298, 815, 1712
VspI ATTAAT 1 cut(s) 708
XagI CCTNNNNNAGG 2 cut(s) 1149, 1821
XapI RAATTY 5 cut(s) 854, 872, 1069, 1645, 1802
XceI RCATGY 1 cut(s) 1799
XcmI CCANNNNNNNNNTGG 1 cut(s) 308
XmaJI CCTAGG 1 cut(s) 1807
XmnI GAANNNNTTC 1 cut(s) 1005
XspI CTAG 4 cut(s) 1151, 1449, 1808, 1872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.