Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001972

Physical Location & Seq

Genomic Coordinates Forward (+)

21895228 .. 21897479

Gene Structure 2252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0128400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGTCTGTGGAAGAATTATCCGCCGAGTACACCAACGGAACAAACGGTGGTTTCGATTCCCAAACCGGAGTATACCATTCCCTTTTTAACCTTGGTGACCGTCACAAGATCCCAACAAGGCCTAACCTTGACACTGCCACATTTGTGTTGTCACAGTTCCCGCACCCTCACCTGGCCGAGTCGCGAGTTGCGCTCATTGACTCGGCCACAAACCAGCGTGTCACTTATGCACAACTTCATCGATCGATACAGTCTCTTGCTTCAGGCTTGCACCAAGCACTTGGAGTTCAAAAAGGGGATGTGGTGTTTGTGTTATCACCAAACTCACTCCTATACCCAACAATATGTCTGGCAGTTTTTTCAGTTGGTGCAATACTAACTACTGCCAACCCACTCAACACCGGGTCAGAAATAGCCAAACAAGTCCGCGACTCAGGTGCCAAACTCGCTATTGCATCACCTGAGGAGGTTCACAAGTTGGTCCCAACTGGTGTGCCTACAATTGTAACATCAAGGCCATCAAATGGTACTGATAACTCACTCTCCATTGAAGAGTTGATTGAATCCTGTGATCCAATACCGACCGAGTTAGCACTAGCACGTCCAACTCAGTCGGACACAGCAGCCATATTGTACTCTTCAGGTACAACTGGGACAAGCAAAGGTGTAGTTTTGACACATGCAAATTTCATAGCCATTATGACATTGCTCAAATGGTCTGTGGATGAAACATCAGCTCAAGATGATGTGTTCTTATGCTTCATTCCTATGTTCCACATCTACGGGCTCGCTTTCTTTGCGCTTGGCATGTTTAGCACAGGATCCACCATTGTCCTGATGCAAAGGTTTGAGTTCAAGGCCATGTTGGATGCTATACAAACTCATAAAGTGAATAATATACCCGCAGTGCCTCCGGTGATTCTTGGACTAGTGAAGTATGCAAGCCAAGCCGGGTGCAAGTTGTCATCTTTGAGGAGGGTTGGTTCAGGAGCTGCGCCATTGAGCAAAGAAGTGGTTGATGAGTTCAGACAGAAGTTTCCTTGGGTTGAGTTGAGGCCGGGGTATGGCCTAACCGAAAGTTGTGGTGCAGCAACTTTCTTTATTTCGGATGAACAAGCTAAGAAACACACTGGCTCATGTGGGCATCTGGTTCCAAAATTTGCTGCTAAGGTTGTGGATATTGAAACTGGACAGGCTTTGGGACCGTATAAGGAAGGAGAGCTGTGGCTGAAGAGTCCAACTATCATGAAAGAGTATTTGGGGAATGTGGAAGCAACTATTGCTACTATTGATGAAGATGGGTGGTTGAAAACTGGTGATCTTTGTTATTTTGATGAGGATGGACTGCTTTACATTGTTGATCGTATCAAGGAGCTCATCAAGCATAATGGCTATCAGGTTGCTCCTGCAGAATTGGAAGCAATTCTCTTGAGCCATCCTCAAATTCTTGATGCTGCTGTCGTACCGGTTGAAGATGAAGAAGCAGGACAAATACCAATGGCATATGTGGTGAGAGCAGCTAGTACTGAACTGATCACTGAAGACCAAGTGGCCCCCTACAAAAAAGTCAGAAAAGTTGGGTTTATATCTGCCATTCCAAGATCAGCTGCAAGCAAAATCTTGAGGAAGGAACTTGTTGGTTTACAAAGCAAACAGCAAATCGTCTCCAGACTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBFD_NFYB_HMF

Protein Analysis

558

Amino Acids

60.44

Weight (kDa)

5.74

Isoelectric Point (pI)

40.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	61 - 420	3.9e-88	AMP-binding enzyme
AMP-binding_C	PF13193	471 - 539	1.4e-11	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15190
fragaria_vesca	FvH4_3g19430
malus_domestica	MD03G1232600.v1.1 MD11G1253300.v1.1
prunus_persica	Prupe.4G176000_v2.0.a1
pyrus_communis	pycom03g17940 pycom11g22450
rosa_chinensis	RchiOBHm_Chr5g0032711
rosa_laevigata	RLG00000022904 RLG00000033418
rosa_multiflora	Rmu_sc0002292.1_g000007 Rmu_ssc0000242.1_g000013
rosa_roxburghii	Rroxscaffold_1G00047390 Rroxscaffold_1G00047850 Rroxscaffold_2G00126870
rosa_rugosa	Rorug01G0128400 Rorug04G0017100 Rorug05G0133200 Rorug05G0268300 Rorug05G0268400 Rorug05G0268500
rosa_samantha	Rh1DG018700 Rh1DG018800 Rh2AG155500 Rh2BG161800 Rh2BG417900 Rh2DG161100 Rh4CG241300 Rh4CG241400 Rh4DG279300 Rh5AG225700 Rh5AG312200 Rh5AG344000 Rh5AG482400 Rh5AG537200 Rh5BG226900 Rh5BG388200 Rh5BG503200 Rh5CG214800 Rh5CG254500 Rh5CG275300 Rh5CG360900 Rh5CG526500 Rh5DG231500
rosa_wichuraiana	Rw5G020690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	437
AccB7I	CCANNNNNTGG	1 cut(s)	524
AccI	GTMKAC	1 cut(s)	72
AccII	CGCG	2 cut(s)	184, 429
AciI	CCGC	4 cut(s)	21, 161, 427, 903
AclWI	GGATC	4 cut(s)	103, 566, 816, 829
AcoI	YGGCCR	2 cut(s)	174, 204
AcsI	RAATTY	3 cut(s)	685, 1157, 1443
AcuI	CTGAAG	4 cut(s)	246, 624, 1250, 1560
AfaI	GTAC	6 cut(s)	29, 529, 635, 646, 1464, 1525
AfiI	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
AgeI	ACCGGT	1 cut(s)	1465
AgsI	TTSAA	7 cut(s)	290, 551, 563, 856, 1184, 1309, 1472
AhlI	ACTAGT	1 cut(s)	928
AjiI	CACGTC	1 cut(s)	602
AjnI	CCWGG	1 cut(s)	171
AjuI	GAANNNNNNNTTGG	2 cut(s)	1241, 1273
AleI	CACNNNNGTG	1 cut(s)	143
AloI	GAACNNNNNNTCC	2 cut(s)	967, 999
AluBI	AGCT	7 cut(s)	737, 992, 1118, 1222, 1375, 1520, 1607
AluI	AGCT	7 cut(s)	737, 992, 1118, 1222, 1375, 1520, 1607
Alw21I	GWGCWC	1 cut(s)	1377
Alw26I	GTCTC	2 cut(s)	258, 1669
AlwI	GGATC	4 cut(s)	103, 566, 816, 829
AlwNI	CAGNNNCTG	1 cut(s)	992
AoxI	GGCC	8 cut(s)	119, 174, 204, 515, 858, 1055, 1066, 1551
ApeKI	GCWGC	7 cut(s)	623, 992, 1088, 1163, 1454, 1517, 1607
ApoI	RAATTY	3 cut(s)	685, 1157, 1443
AsiGI	ACCGGT	1 cut(s)	1465
Asp700I	GAANNNNTTC	1 cut(s)	1422
AspLEI	GCGC	3 cut(s)	193, 802, 997
AspS9I	GGNCC	3 cut(s)	481, 1202, 1552
AsuC2I	CCSGG	3 cut(s)	403, 952, 1059
AsuHPI	GGTGA	7 cut(s)	107, 161, 309, 450, 928, 1328, 1522
AvaII	GGWCC	2 cut(s)	481, 1202
AxyI	CCTNAGG	1 cut(s)	462
BamHI	GGATCC	1 cut(s)	821
BanI	GGYRCC	1 cut(s)	437
BanII	GRGCYC	2 cut(s)	789, 1377
BbsI	GAAGAC	1 cut(s)	1548
Bbv12I	GWGCWC	1 cut(s)	1377
BbvI	GCAGC	7 cut(s)	635, 979, 1100, 1150, 1441, 1529, 1594
BccI	CCATC	4 cut(s)	526, 1292, 1334, 1443
BcgI	CGANNNNNNTGC	2 cut(s)	419, 453
BciT130I	CCWGG	1 cut(s)	173
BclI	TGATCA	1 cut(s)	1533
BcnI	CCSGG	3 cut(s)	403, 952, 1059
BcoDI	GTCTC	2 cut(s)	258, 1669
BcuI	ACTAGT	1 cut(s)	928
BfaI	CTAG	3 cut(s)	596, 929, 1521
BfmI	CTRYAG	1 cut(s)	1407
BisI	GCNGC	7 cut(s)	624, 993, 1089, 1164, 1455, 1518, 1608
BlsI	GCNGC	7 cut(s)	625, 994, 1090, 1165, 1456, 1519, 1609
BmcAI	AGTACT	1 cut(s)	1525
Bme1390I	CCNGG	4 cut(s)	173, 403, 952, 1059
Bme18I	GGWCC	2 cut(s)	481, 1202
BmgBI	CACGTC	1 cut(s)	602
BmgT120I	GGNCC	3 cut(s)	481, 1202, 1552
BmiI	GGNNCC	6 cut(s)	439, 483, 823, 1152, 1203, 1554
BmrFI	CCNGG	4 cut(s)	173, 403, 952, 1059
BmrI	ACTGGG	1 cut(s)	660
BmsI	GCATC	5 cut(s)	464, 828, 859, 1153, 1441
BmuI	ACTGGG	1 cut(s)	660
BpiI	GAAGAC	1 cut(s)	1548
BplI	GAGNNNNNCTC	4 cut(s)	177, 209, 1423, 1455
BpmI	CTGGAG	1 cut(s)	1651
Bpu10I	CCTNAGC	1 cut(s)	1167
BpuEI	CTTGAG	3 cut(s)	723, 1450, 1642
BpuMI	CCSGG	3 cut(s)	403, 952, 1059
Bsa29I	ATCGAT	2 cut(s)	241, 245
BsaJI	CCNNGG	3 cut(s)	91, 1040, 1058
BsaWI	WCCGGW	3 cut(s)	65, 913, 1465
BsaXI	ACNNNNNCTCC	4 cut(s)	527, 557, 967, 997
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
Bse118I	RCCGGY	1 cut(s)	1465
Bse1I	ACTGG	5 cut(s)	493, 655, 1135, 1192, 1318
Bse21I	CCTNAGG	1 cut(s)	462
Bse3DI	GCAATG	1 cut(s)	704
BseBI	CCWGG	1 cut(s)	173
BseCI	ATCGAT	2 cut(s)	241, 245
BseDI	CCNNGG	3 cut(s)	91, 1040, 1058
BseGI	GGATG	6 cut(s)	304, 730, 874, 1114, 1345, 1435
BseLI	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
BseMI	GCAATG	1 cut(s)	704
BseMII	CTCAG	3 cut(s)	447, 453, 623
BseNI	ACTGG	5 cut(s)	493, 655, 1135, 1192, 1318
BseRI	GAGGAG	2 cut(s)	479, 988
BseXI	GCAGC	7 cut(s)	635, 979, 1100, 1150, 1441, 1529, 1594
BsgI	GTGCAG	1 cut(s)	1107
Bsh1236I	CGCG	2 cut(s)	184, 429
Bsh1285I	CGRYCG	2 cut(s)	245, 585
BshFI	GGCC	8 cut(s)	121, 176, 206, 517, 860, 1057, 1068, 1553
BshNI	GGYRCC	1 cut(s)	437
BshTI	ACCGGT	1 cut(s)	1465
BshVI	ATCGAT	2 cut(s)	241, 245
BsiEI	CGRYCG	2 cut(s)	245, 585
BsiHKAI	GWGCWC	1 cut(s)	1377
BsiSI	CCGG	6 cut(s)	66, 402, 914, 951, 1058, 1466
BslFI	GGGAC	3 cut(s)	467, 667, 1215
BslI	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
BsmAI	GTCTC	2 cut(s)	258, 1669
BsmBI	CGTCTC	1 cut(s)	1669
BsmFI	GGGAC	3 cut(s)	467, 667, 1215
BsnI	GGCC	8 cut(s)	121, 176, 206, 517, 860, 1057, 1068, 1553
Bsp1286I	GDGCHC	2 cut(s)	789, 1377
Bsp143I	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
Bsp68I	TCGCGA	1 cut(s)	184
BspACI	CCGC	4 cut(s)	21, 161, 427, 903
BspANI	GGCC	8 cut(s)	121, 176, 206, 517, 860, 1057, 1068, 1553
BspCNI	CTCAG	3 cut(s)	446, 454, 622
BspDI	ATCGAT	2 cut(s)	241, 245
BspFNI	CGCG	2 cut(s)	184, 429
BspHI	TCATGA	1 cut(s)	1245
BspLI	GGNNCC	6 cut(s)	439, 483, 823, 1152, 1203, 1554
BspMAI	CTGCAG	1 cut(s)	1411
BspPI	GGATC	4 cut(s)	103, 566, 816, 829
BspT107I	GGYRCC	1 cut(s)	437
BsrDI	GCAATG	1 cut(s)	704
BsrFI	RCCGGY	1 cut(s)	1465
BsrI	ACTGG	5 cut(s)	493, 655, 1135, 1192, 1318
BssAI	RCCGGY	1 cut(s)	1465
BssECI	CCNNGG	3 cut(s)	91, 1040, 1058
BssMI	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
BssNAI	GTATAC	1 cut(s)	73
BssT1I	CCWWGG	2 cut(s)	91, 1040
Bst1107I	GTATAC	1 cut(s)	73
Bst2UI	CCWGG	1 cut(s)	173
Bst4CI	ACNGT	5 cut(s)	47, 101, 156, 252, 1206
Bst6I	CTCTTC	3 cut(s)	546, 643, 1226
BstAPI	GCANNNNNTGC	1 cut(s)	1280
BstC8I	GCNNGC	4 cut(s)	269, 789, 943, 1612
BstDEI	CTNAG	5 cut(s)	433, 462, 609, 1119, 1167
BstEII	GGTNACC	1 cut(s)	95
BstF5I	GGATG	6 cut(s)	304, 730, 874, 1114, 1345, 1435
BstFNI	CGCG	2 cut(s)	184, 429
BstHHI	GCGC	3 cut(s)	193, 802, 997
BstKTI	GATC	8 cut(s)	111, 245, 574, 824, 1321, 1363, 1536, 1604
BstMAI	GTCTC	2 cut(s)	258, 1669
BstMBI	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
BstMCI	CGRYCG	2 cut(s)	245, 585
BstMWI	GCNNNNNNNGC	7 cut(s)	190, 446, 797, 813, 947, 1280, 1381
BstNI	CCWGG	1 cut(s)	173
BstNSI	RCATGY	2 cut(s)	683, 811
BstPI	GGTNACC	1 cut(s)	95
BstSCI	CCNGG	4 cut(s)	171, 401, 950, 1057
BstSFI	CTRYAG	1 cut(s)	1407
BstUI	CGCG	2 cut(s)	184, 429
BstV1I	GCAGC	7 cut(s)	635, 979, 1100, 1150, 1441, 1529, 1594
BstV2I	GAAGAC	1 cut(s)	1548
BstX2I	RGATCY	2 cut(s)	108, 821
BstXI	CCANNNNNNTGG	1 cut(s)	281
BstYI	RGATCY	2 cut(s)	108, 821
BstZ17I	GTATAC	1 cut(s)	73
Bsu15I	ATCGAT	2 cut(s)	241, 245
Bsu36I	CCTNAGG	1 cut(s)	462
BsuRI	GGCC	8 cut(s)	121, 176, 206, 517, 860, 1057, 1068, 1553
BsuTUI	ATCGAT	2 cut(s)	241, 245
BtrI	CACGTC	1 cut(s)	602
BtsCI	GGATG	6 cut(s)	304, 730, 874, 1114, 1345, 1435
BtsI	GCAGTG	2 cut(s)	132, 912
BtsIMutI	CAGTG	4 cut(s)	132, 912, 1128, 1536
BtuMI	TCGCGA	1 cut(s)	184
Cac8I	GCNNGC	4 cut(s)	269, 789, 943, 1612
CaiI	CAGNNNCTG	1 cut(s)	992
CciI	TCATGA	1 cut(s)	1245
CfoI	GCGC	3 cut(s)	193, 802, 997
Cfr10I	RCCGGY	1 cut(s)	1465
Cfr13I	GGNCC	3 cut(s)	481, 1202, 1552
ClaI	ATCGAT	2 cut(s)	241, 245
Csp6I	GTAC	6 cut(s)	28, 528, 634, 645, 1463, 1524
CspAI	ACCGGT	1 cut(s)	1465
CviAII	CATG	5 cut(s)	680, 808, 862, 1137, 1246
CviQI	GTAC	6 cut(s)	28, 528, 634, 645, 1463, 1524
DdeI	CTNAG	5 cut(s)	433, 462, 609, 1119, 1167
DpnI	GATC	8 cut(s)	110, 244, 573, 823, 1320, 1362, 1535, 1603
DpnII	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
EaeI	YGGCCR	2 cut(s)	174, 204
Eam1104I	CTCTTC	3 cut(s)	546, 643, 1226
EarI	CTCTTC	3 cut(s)	546, 643, 1226
EciI	GGCGGA	1 cut(s)	10
Ecl136II	GAGCTC	1 cut(s)	1375
Eco130I	CCWWGG	2 cut(s)	91, 1040
Eco147I	AGGCCT	1 cut(s)	121
Eco24I	GRGCYC	2 cut(s)	789, 1377
Eco47I	GGWCC	2 cut(s)	481, 1202
Eco53kI	GAGCTC	1 cut(s)	1375
Eco57I	CTGAAG	4 cut(s)	246, 624, 1250, 1560
Eco81I	CCTNAGG	1 cut(s)	462
Eco91I	GGTNACC	1 cut(s)	95
EcoICRI	GAGCTC	1 cut(s)	1375
EcoO65I	GGTNACC	1 cut(s)	95
EcoRII	CCWGG	1 cut(s)	171
EcoT14I	CCWWGG	2 cut(s)	91, 1040
EcoT38I	GRGCYC	2 cut(s)	789, 1377
ErhI	CCWWGG	2 cut(s)	91, 1040
Esp3I	CGTCTC	1 cut(s)	1669
FaeI	CATG	5 cut(s)	683, 811, 865, 1140, 1249
FaqI	GGGAC	3 cut(s)	467, 667, 1215
FatI	CATG	5 cut(s)	679, 807, 861, 1136, 1245
FauI	CCCGC	2 cut(s)	168, 910
FauNDI	CATATG	1 cut(s)	1504
FbaI	TGATCA	1 cut(s)	1533
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	7 cut(s)	624, 993, 1089, 1164, 1455, 1518, 1608
FokI	GGATG	6 cut(s)	311, 737, 881, 1121, 1352, 1422
FriOI	GRGCYC	2 cut(s)	789, 1377
Fsp4HI	GCNGC	7 cut(s)	624, 993, 1089, 1164, 1455, 1518, 1608
FspBI	CTAG	3 cut(s)	596, 929, 1521
GlaI	GCGC	3 cut(s)	192, 801, 996
GluI	GCNGC	7 cut(s)	624, 993, 1089, 1164, 1455, 1518, 1608
GsuI	CTGGAG	1 cut(s)	1651
HaeIII	GGCC	8 cut(s)	121, 176, 206, 517, 860, 1057, 1068, 1553
HapII	CCGG	6 cut(s)	66, 402, 914, 951, 1058, 1466
HhaI	GCGC	3 cut(s)	193, 802, 997
Hin1II	CATG	5 cut(s)	683, 811, 865, 1140, 1249
Hin6I	GCGC	3 cut(s)	191, 800, 995
HinP1I	GCGC	3 cut(s)	191, 800, 995
HinfI	GANTC	7 cut(s)	56, 179, 200, 431, 563, 919, 1234
HpaII	CCGG	6 cut(s)	66, 402, 914, 951, 1058, 1466
HphI	GGTGA	7 cut(s)	107, 161, 309, 450, 928, 1328, 1522
Hpy166II	GTNNAC	4 cut(s)	30, 73, 472, 1643
Hpy188I	TCNGA	5 cut(s)	409, 616, 1028, 1108, 1571
Hpy188III	TCNNGA	9 cut(s)	183, 740, 835, 987, 1246, 1429, 1448, 1621, 1668
Hpy8I	GTNNAC	4 cut(s)	30, 73, 472, 1643
HpyAV	CCTTC	2 cut(s)	1208, 1621
HpyCH4III	ACNGT	5 cut(s)	47, 101, 156, 252, 1206
HpyCH4IV	ACGT	1 cut(s)	601
HpyF10VI	GCNNNNNNNGC	7 cut(s)	190, 446, 797, 813, 947, 1280, 1381
HpyF3I	CTNAG	5 cut(s)	433, 462, 609, 1119, 1167
HpySE526I	ACGT	1 cut(s)	601
Hsp92II	CATG	5 cut(s)	683, 811, 865, 1140, 1249
HspAI	GCGC	3 cut(s)	191, 800, 995
Ksp22I	TGATCA	1 cut(s)	1533
Kzo9I	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
LmnI	GCTCC	3 cut(s)	989, 1372, 1408
Lsp1109I	GCAGC	7 cut(s)	635, 979, 1100, 1150, 1441, 1529, 1594
LweI	GCATC	5 cut(s)	464, 828, 859, 1153, 1441
MaeI	CTAG	3 cut(s)	596, 929, 1521
MaeII	ACGT	1 cut(s)	601
MaeIII	GTNAC	5 cut(s)	95, 101, 150, 220, 505
MalI	GATC	8 cut(s)	110, 244, 573, 823, 1320, 1362, 1535, 1603
MboI	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
MboII	GAAGA	8 cut(s)	23, 563, 630, 1243, 1307, 1484, 1490, 1553
MfeI	CAATTG	1 cut(s)	501
MflI	RGATCY	2 cut(s)	108, 821
MhlI	GDGCHC	2 cut(s)	789, 1377
MluCI	AATT	7 cut(s)	14, 501, 685, 1157, 1412, 1422, 1443
MlyI	GAGTC	4 cut(s)	188, 194, 425, 1243
MmeI	TCCRAC	4 cut(s)	594, 629, 846, 1262
MroXI	GAANNNNTTC	1 cut(s)	1422
MseI	TTAA	1 cut(s)	87
MslI	CAYNNNNRTG	2 cut(s)	143, 767
MspA1I	CMGCKG	1 cut(s)	1607
MspI	CCGG	6 cut(s)	66, 402, 914, 951, 1058, 1466
MspR9I	CCNGG	4 cut(s)	173, 403, 952, 1059
MunI	CAATTG	1 cut(s)	501
MvaI	CCWGG	1 cut(s)	173
MvnI	CGCG	2 cut(s)	184, 429
MwoI	GCNNNNNNNGC	7 cut(s)	190, 446, 797, 813, 947, 1280, 1381
NciI	CCSGG	3 cut(s)	403, 952, 1059
NdeI	CATATG	1 cut(s)	1504
NdeII	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
NlaIII	CATG	5 cut(s)	683, 811, 865, 1140, 1249
NlaIV	GGNNCC	6 cut(s)	439, 483, 823, 1152, 1203, 1554
NmeAIII	GCCGAG	3 cut(s)	49, 182, 202
NmuCI	GTSAC	4 cut(s)	95, 101, 150, 220
NruI	TCGCGA	1 cut(s)	184
NspI	RCATGY	2 cut(s)	683, 811
OliI	CACNNNNGTG	1 cut(s)	143
PagI	TCATGA	1 cut(s)	1245
PceI	AGGCCT	1 cut(s)	121
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PdmI	GAANNNNTTC	1 cut(s)	1422
PfeI	GAWTC	3 cut(s)	56, 563, 919
PflMI	CCANNNNNTGG	1 cut(s)	524
PinAI	ACCGGT	1 cut(s)	1465
PkrI	GCNGC	7 cut(s)	625, 994, 1090, 1165, 1456, 1519, 1609
Ple19I	CGATCG	1 cut(s)	245
PleI	GAGTC	4 cut(s)	187, 194, 425, 1242
PpsI	GAGTC	4 cut(s)	187, 194, 425, 1242
Psp124BI	GAGCTC	1 cut(s)	1377
Psp6I	CCWGG	1 cut(s)	171
PspEI	GGTNACC	1 cut(s)	95
PspGI	CCWGG	1 cut(s)	171
PspN4I	GGNNCC	6 cut(s)	439, 483, 823, 1152, 1203, 1554
PspPI	GGNCC	3 cut(s)	481, 1202, 1552
PstI	CTGCAG	1 cut(s)	1411
PstNI	CAGNNNCTG	1 cut(s)	992
PsuI	RGATCY	2 cut(s)	108, 821
PvuI	CGATCG	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	1607
RruI	TCGCGA	1 cut(s)	184
RsaI	GTAC	6 cut(s)	29, 529, 635, 646, 1464, 1525
RsaNI	GTAC	6 cut(s)	28, 528, 634, 645, 1463, 1524
RseI	CAYNNNNRTG	2 cut(s)	143, 767
SacI	GAGCTC	1 cut(s)	1377
SaqAI	TTAA	1 cut(s)	87
SatI	GCNGC	7 cut(s)	624, 993, 1089, 1164, 1455, 1518, 1608
Sau3AI	GATC	8 cut(s)	108, 242, 571, 821, 1318, 1360, 1533, 1601
Sau96I	GGNCC	3 cut(s)	481, 1202, 1552
ScaI	AGTACT	1 cut(s)	1525
SchI	GAGTC	4 cut(s)	188, 194, 425, 1243
ScrFI	CCNGG	4 cut(s)	173, 403, 952, 1059
SduI	GDGCHC	2 cut(s)	789, 1377
SfaNI	GCATC	5 cut(s)	464, 828, 859, 1153, 1441
SfcI	CTRYAG	1 cut(s)	1407
SinI	GGWCC	2 cut(s)	481, 1202
SmiMI	CAYNNNNRTG	2 cut(s)	143, 767
SmlI	CTYRAG	3 cut(s)	738, 1429, 1621
SmoI	CTYRAG	3 cut(s)	738, 1429, 1621
SpeI	ACTAGT	1 cut(s)	928
Sse9I	AATT	7 cut(s)	14, 501, 685, 1157, 1412, 1422, 1443
SseBI	AGGCCT	1 cut(s)	121
SsiI	CCGC	4 cut(s)	21, 161, 427, 903
SspMI	CTAG	3 cut(s)	596, 929, 1521
SstI	GAGCTC	1 cut(s)	1377
StuI	AGGCCT	1 cut(s)	121
StyD4I	CCNGG	4 cut(s)	171, 401, 950, 1057
StyI	CCWWGG	2 cut(s)	91, 1040
TaaI	ACNGT	5 cut(s)	47, 101, 156, 252, 1206
TaiI	ACGT	1 cut(s)	604
TaqI	TCGA	3 cut(s)	54, 241, 245
TaqII	GACCGA	1 cut(s)	599
TasI	AATT	7 cut(s)	14, 501, 685, 1157, 1412, 1422, 1443
TatI	WGTACW	3 cut(s)	27, 633, 1523
TfiI	GAWTC	3 cut(s)	56, 563, 919
Tru1I	TTAA	1 cut(s)	87
Tru9I	TTAA	1 cut(s)	87
TscAI	CASTG	4 cut(s)	139, 912, 1135, 1543
TseFI	GTSAC	4 cut(s)	95, 101, 150, 220
TseI	GCWGC	7 cut(s)	623, 992, 1088, 1163, 1454, 1517, 1607
Tsp45I	GTSAC	4 cut(s)	95, 101, 150, 220
TspDTI	ATGAA	8 cut(s)	227, 679, 741, 751, 1125, 1262, 1308, 1491
TspGWI	ACGGA	1 cut(s)	51
TspRI	CASTG	4 cut(s)	139, 912, 1135, 1543
Van91I	CCANNNNNTGG	1 cut(s)	524
VpaK11BI	GGWCC	2 cut(s)	481, 1202
XapI	RAATTY	3 cut(s)	685, 1157, 1443
XceI	RCATGY	2 cut(s)	683, 811
XmiI	GTMKAC	1 cut(s)	72
XmnI	GAANNNNTTC	1 cut(s)	1422
XspI	CTAG	3 cut(s)	596, 929, 1521
ZrmI	AGTACT	1 cut(s)	1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.