Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001972

Physical Location & Seq

Genomic Coordinates Reverse (-)

30313981 .. 30315621

Gene Structure 1641 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0268400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGAGAGAGGAGGTCTCTAGTTTAATGGGGGTTGAAGTGGTAGCTTCACATGAAAAATATCTATGGCTTCCTACCTACGTGGGGAGGAAGAAGACTGCTACATTCCAATATATTAAAGATAACATGGCCAAGAAGATTGATGGTTGGCAGGGTAAGATGTTAAGTGGTGCGGGTAAGGATATTTTGATTCGGGTAGTAGCTCAAGCTTTACCTTCTTATGCTATGAGTGTTTTCCAGCTGACAAAGAACTTTTGTGAGGATTTGGAACAGATGTGTGCCAGAGTTTGGTGGGGTACTACTTTGGACAAGAAGAAAATACATTGGAAGACTTGGAATGCCTTGTGTAATCCAAGGGAGGAAGGAGGATTGGGATTTCAGAGTCTTACGAATTTCAATTCGGCAATGCTAGCGAAACAGGCATGGAGGGTAATTCTTTATCCGGACTCTCTGATTGCAAGAATTTATAAAGCTAAGCACTTTCTAGAGTCTTCTTTTTGGAAGGCTCCACCCCATGCTTCCCCCTCGTTTTCCTGGAGAAGTATTAGTTCTACAAGGGACCTCTTGAAGGAGAATTCATGTTGGCAGATAGGTAATGGGGAGGAAGTTAACATATGGTCAGATTGTTGGATTTCTGCTTTGCAAGCTAGGAGGCCGATTCACAATGCTTCAGCTATAGGAGAAGTTAGCAAAGTTAGTGATTTGATTGCAGCTACGGGAGTTTGGAATGAGCCTCTGATTCGAAGGCTGTTTGATAGAGAGGAGGCCGAGATCATATTAAACATCCCTCTCAGTCGTAGGAATATACCTGATCGATTGGTGTGGAGGTTGGACAAAAACGGTGAATTTTCTGTTAAAACGGCTACCGCAAAAGTGTTTGCTTGGAGGGTGTGTCATGATATTTTACCATCAGTGGAGAGGTTAGCTACAAGGAATATTCAGGTAGAATCTCAAGGATGCGTTTTGTGTGGAGGCCGCAATGAGTCCACTTTACATCCATCTAGAGATTGTCCTTTCACGAGACAGGTGCTGCAGGGCCATGGGATCTTGAGGAGGACATGTTTTGATCCACAAGTAGCAGACTGTGATTTGTTGACATGGTTTGATTATTGTGTGAAGACATTAGCTCTTACAGAGTTGGGGGTGTTGATTTTCCTACTGTGGAGCATTTGGAAAGAACGTAACTCACGAGTCTGGGAGGGGAAGAGTGCGTTGGCTTGTGATGTTTTGCTTAGAGCTGACGAGTGTCGTTGGCTGGTGTTAGAAGAAGAAGAGTGCAAACATGGGGCTCCATCAGCAGGAGTGTTAAAAATCAATGTTGATGGCTCCTTTCATCATACCACTAGGTCTGGAGGTTTTGGTTTTGTGATTAGAGATTCAGGTGGTGCCATGTTAGCTGGAGGTGCAGGTCCTCTACGCGGACTGATATTAGCAGAACATGCCGAAGTTTTGGCGTGTAGGAATGCAATTAACTTTGCAATTGATCATGGCTTCGTTCCAGCCCTTTTGGAGATTGACGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0002831 GO:0002833 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009791 GO:0009814 GO:0009845 GO:0010154 GO:0012505 GO:0016192 GO:0022414 GO:0031347 GO:0031349 GO:0031410 GO:0031982 GO:0032101 GO:0032103 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0061458 GO:0065007 GO:0080001 GO:0080134 GO:0090351 GO:0097708 GO:0098542 GO:1900424 GO:1900426 GO:1903335

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vta1

Protein Analysis

506

Amino Acids

56.96

Weight (kDa)

8.4

Isoelectric Point (pI)

50.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	289 - 342	6.4e-08	zinc-binding in reverse transcriptase
RVT_3	PF13456	438 - 505	1.5e-10	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15190
fragaria_vesca	FvH4_3g19430
malus_domestica	MD03G1232600.v1.1 MD11G1253300.v1.1
prunus_persica	Prupe.4G176000_v2.0.a1
pyrus_communis	pycom03g17940 pycom11g22450
rosa_chinensis	RchiOBHm_Chr5g0032711
rosa_laevigata	RLG00000022904 RLG00000033418
rosa_multiflora	Rmu_sc0002292.1_g000007 Rmu_ssc0000242.1_g000013
rosa_roxburghii	Rroxscaffold_1G00047390 Rroxscaffold_1G00047850 Rroxscaffold_2G00126870
rosa_rugosa	Rorug01G0128400 Rorug04G0017100 Rorug05G0133200 Rorug05G0268300 Rorug05G0268400 Rorug05G0268500
rosa_samantha	Rh1DG018700 Rh1DG018800 Rh2AG155500 Rh2BG161800 Rh2BG417900 Rh2DG161100 Rh4CG241300 Rh4CG241400 Rh4DG279300 Rh5AG225700 Rh5AG312200 Rh5AG344000 Rh5AG482400 Rh5AG537200 Rh5BG226900 Rh5BG388200 Rh5BG503200 Rh5CG214800 Rh5CG254500 Rh5CG275300 Rh5CG360900 Rh5CG526500 Rh5DG231500
rosa_wichuraiana	Rw5G020690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	465
Acc36I	ACCTGC	1 cut(s)	1394
AccB1I	GGYRCC	1 cut(s)	1382
AccB7I	CCANNNNNTGG	1 cut(s)	285
AccII	CGCG	1 cut(s)	1416
AccIII	TCCGGA	1 cut(s)	439
AciI	CCGC	4 cut(s)	170, 864, 973, 1416
AclWI	GGATC	2 cut(s)	1049, 1058
AcoI	YGGCCR	1 cut(s)	126
AcsI	RAATTY	4 cut(s)	388, 459, 571, 842
AcuI	CTGAAG	1 cut(s)	651
AfaI	GTAC	1 cut(s)	295
AfiI	CCNNNNNNNGG	5 cut(s)	81, 285, 565, 1295, 1415
AflIII	ACRYGT	1 cut(s)	1055
AgsI	TTSAA	3 cut(s)	35, 394, 565
AjnI	CCWGG	1 cut(s)	530
AjuI	GAANNNNNNNTTGG	2 cut(s)	1193, 1225
Alw26I	GTCTC	2 cut(s)	19, 1012
AlwI	GGATC	2 cut(s)	1049, 1058
AlwNI	CAGNNNCTG	1 cut(s)	1027
Aor13HI	TCCGGA	1 cut(s)	439
AoxI	GGCC	5 cut(s)	126, 650, 762, 970, 1033
ApeKI	GCWGC	2 cut(s)	707, 1027
ApoI	RAATTY	4 cut(s)	388, 459, 571, 842
AspS9I	GGNCC	3 cut(s)	556, 1033, 1406
AsuHPI	GGTGA	1 cut(s)	851
AsuII	TTCGAA	1 cut(s)	739
AsuNHI	GCTAGC	1 cut(s)	406
AvaII	GGWCC	2 cut(s)	556, 1406
BalI	TGGCCA	1 cut(s)	128
BanI	GGYRCC	1 cut(s)	1382
BanII	GRGCYC	1 cut(s)	1288
BauI	CACGAG	2 cut(s)	1015, 1185
BbsI	GAAGAC	4 cut(s)	98, 332, 480, 1121
BbvI	GCAGC	2 cut(s)	719, 1014
BccI	CCATC	5 cut(s)	134, 913, 1003, 1297, 1313
BceAI	ACGGC	1 cut(s)	873
BcgI	CGANNNNNNTGC	2 cut(s)	1006, 1040
BciT130I	CCWGG	1 cut(s)	532
BclI	TGATCA	1 cut(s)	1480
BcoDI	GTCTC	2 cut(s)	19, 1012
BfaI	CTAG	6 cut(s)	18, 407, 482, 645, 999, 1341
BfmI	CTRYAG	2 cut(s)	672, 1028
BfuAI	ACCTGC	1 cut(s)	1394
BisI	GCNGC	3 cut(s)	708, 973, 1028
BlpI	GCTNAGC	1 cut(s)	471
BlsI	GCNGC	3 cut(s)	709, 974, 1029
Bme1390I	CCNGG	1 cut(s)	532
Bme18I	GGWCC	2 cut(s)	556, 1406
BmgT120I	GGNCC	3 cut(s)	556, 1033, 1406
BmiI	GGNNCC	5 cut(s)	504, 557, 1287, 1324, 1384
BmrFI	CCNGG	1 cut(s)	532
BmsI	GCATC	1 cut(s)	944
BmtI	GCTAGC	1 cut(s)	410
BoxI	GACNNNNGTC	1 cut(s)	1242
BpiI	GAAGAC	4 cut(s)	98, 332, 480, 1121
BplI	GAGNNNNNCTC	1 cut(s)	31
BpmI	CTGGAG	3 cut(s)	553, 1368, 1416
Bpu1102I	GCTNAGC	1 cut(s)	471
Bpu14I	TTCGAA	1 cut(s)	739
BpuEI	CTTGAG	3 cut(s)	186, 933, 1066
Bsa29I	ATCGAT	1 cut(s)	811
BsaAI	YACGTR	1 cut(s)	79
BsaI	GGTCTC	1 cut(s)	19
BsaJI	CCNNGG	2 cut(s)	350, 1036
BsaWI	WCCGGW	1 cut(s)	439
BsaXI	ACNNNNNCTCC	4 cut(s)	874, 904, 1042, 1072
Bsc4I	CCNNNNNNNGG	5 cut(s)	81, 285, 565, 1295, 1415
Bse3DI	GCAATG	2 cut(s)	408, 982
BseAI	TCCGGA	1 cut(s)	439
BseBI	CCWGG	1 cut(s)	532
BseCI	ATCGAT	1 cut(s)	811
BseDI	CCNNGG	2 cut(s)	350, 1036
BseGI	GGATG	3 cut(s)	780, 959, 991
BseLI	CCNNNNNNNGG	5 cut(s)	81, 285, 565, 1295, 1415
BseMI	GCAATG	2 cut(s)	408, 982
BseMII	CTCAG	1 cut(s)	802
BseRI	GAGGAG	3 cut(s)	23, 773, 1063
BseXI	GCAGC	2 cut(s)	719, 1014
BsgI	GTGCAG	1 cut(s)	1422
Bsh1236I	CGCG	1 cut(s)	1416
BshFI	GGCC	5 cut(s)	128, 652, 764, 972, 1035
BshNI	GGYRCC	1 cut(s)	1382
BshVI	ATCGAT	1 cut(s)	811
BsiSI	CCGG	1 cut(s)	440
BslFI	GGGAC	1 cut(s)	569
BslI	CCNNNNNNNGG	5 cut(s)	81, 285, 565, 1295, 1415
BsmAI	GTCTC	2 cut(s)	19, 1012
BsmFI	GGGAC	1 cut(s)	569
BsmI	GAATGC	2 cut(s)	340, 1465
BsnI	GGCC	5 cut(s)	128, 652, 764, 972, 1035
Bso31I	GGTCTC	1 cut(s)	19
Bsp119I	TTCGAA	1 cut(s)	739
Bsp1286I	GDGCHC	1 cut(s)	1288
Bsp13I	TCCGGA	1 cut(s)	439
Bsp143I	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
Bsp1720I	GCTNAGC	1 cut(s)	471
Bsp19I	CCATGG	1 cut(s)	1036
BspACI	CCGC	4 cut(s)	170, 864, 973, 1416
BspANI	GGCC	5 cut(s)	128, 652, 764, 972, 1035
BspCNI	CTCAG	1 cut(s)	801
BspDI	ATCGAT	1 cut(s)	811
BspEI	TCCGGA	1 cut(s)	439
BspFNI	CGCG	1 cut(s)	1416
BspHI	TCATGA	1 cut(s)	892
BspLI	GGNNCC	5 cut(s)	504, 557, 1287, 1324, 1384
BspMAI	CTGCAG	1 cut(s)	1032
BspMI	ACCTGC	1 cut(s)	1394
BspOI	GCTAGC	1 cut(s)	410
BspPI	GGATC	2 cut(s)	1049, 1058
BspT104I	TTCGAA	1 cut(s)	739
BspT107I	GGYRCC	1 cut(s)	1382
BspTNI	GGTCTC	1 cut(s)	19
BsrDI	GCAATG	2 cut(s)	408, 982
BssECI	CCNNGG	2 cut(s)	350, 1036
BssMI	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
BssSI	CACGAG	2 cut(s)	1015, 1185
BssT1I	CCWWGG	2 cut(s)	350, 1036
Bst2BI	CACGAG	2 cut(s)	1015, 1185
Bst2UI	CCWGG	1 cut(s)	532
Bst4CI	ACNGT	3 cut(s)	839, 1082, 1158
Bst6I	CTCTTC	2 cut(s)	1196, 1263
BstAPI	GCANNNNNTGC	1 cut(s)	1436
BstBAI	YACGTR	1 cut(s)	79
BstBI	TTCGAA	1 cut(s)	739
BstC8I	GCNNGC	2 cut(s)	408, 642
BstDEI	CTNAG	3 cut(s)	471, 788, 1229
BstDSI	CCRYGG	1 cut(s)	1036
BstENI	CCTNNNNNAGG	1 cut(s)	563
BstF5I	GGATG	3 cut(s)	780, 959, 991
BstFNI	CGCG	1 cut(s)	1416
BstKTI	GATC	5 cut(s)	771, 811, 1044, 1066, 1483
BstMAI	GTCTC	2 cut(s)	19, 1012
BstMBI	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
BstMWI	GCNNNNNNNGC	7 cut(s)	407, 416, 641, 1292, 1391, 1400, 1436
BstNI	CCWGG	1 cut(s)	532
BstNSI	RCATGY	2 cut(s)	1059, 1439
BstPAI	GACNNNNGTC	1 cut(s)	1242
BstSCI	CCNGG	1 cut(s)	530
BstSFI	CTRYAG	2 cut(s)	672, 1028
BstUI	CGCG	1 cut(s)	1416
BstV1I	GCAGC	2 cut(s)	719, 1014
BstV2I	GAAGAC	4 cut(s)	98, 332, 480, 1121
BstX2I	RGATCY	1 cut(s)	1041
BstYI	RGATCY	1 cut(s)	1041
Bsu15I	ATCGAT	1 cut(s)	811
BsuRI	GGCC	5 cut(s)	128, 652, 764, 972, 1035
BsuTUI	ATCGAT	1 cut(s)	811
BtgI	CCRYGG	1 cut(s)	1036
BtsCI	GGATG	3 cut(s)	780, 959, 991
BtsIMutI	CAGTG	1 cut(s)	915
BveI	ACCTGC	1 cut(s)	1394
Cac8I	GCNNGC	2 cut(s)	408, 642
CaiI	CAGNNNCTG	1 cut(s)	1027
CciI	TCATGA	1 cut(s)	892
Cfr13I	GGNCC	3 cut(s)	556, 1033, 1406
ClaI	ATCGAT	1 cut(s)	811
Csp6I	GTAC	1 cut(s)	294
CviQI	GTAC	1 cut(s)	294
DdeI	CTNAG	3 cut(s)	471, 788, 1229
DpnI	GATC	5 cut(s)	770, 810, 1043, 1065, 1482
DpnII	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
EaeI	YGGCCR	1 cut(s)	126
Eam1104I	CTCTTC	2 cut(s)	1196, 1263
EarI	CTCTTC	2 cut(s)	1196, 1263
Eco130I	CCWWGG	2 cut(s)	350, 1036
Eco24I	GRGCYC	1 cut(s)	1288
Eco31I	GGTCTC	1 cut(s)	19
Eco47I	GGWCC	2 cut(s)	556, 1406
Eco57I	CTGAAG	1 cut(s)	651
EcoNI	CCTNNNNNAGG	1 cut(s)	563
EcoO109I	RGGNCCY	2 cut(s)	556, 1406
EcoRI	GAATTC	1 cut(s)	571
EcoRII	CCWGG	1 cut(s)	530
EcoT14I	CCWWGG	2 cut(s)	350, 1036
EcoT38I	GRGCYC	1 cut(s)	1288
ErhI	CCWWGG	2 cut(s)	350, 1036
FaqI	GGGAC	1 cut(s)	569
FauI	CCCGC	1 cut(s)	163
FauNDI	CATATG	1 cut(s)	611
FbaI	TGATCA	1 cut(s)	1480
Fnu4HI	GCNGC	3 cut(s)	708, 973, 1028
FokI	GGATG	3 cut(s)	767, 966, 978
FriOI	GRGCYC	1 cut(s)	1288
Fsp4HI	GCNGC	3 cut(s)	708, 973, 1028
FspBI	CTAG	6 cut(s)	18, 407, 482, 645, 999, 1341
GluI	GCNGC	3 cut(s)	708, 973, 1028
GsuI	CTGGAG	3 cut(s)	553, 1368, 1416
HaeIII	GGCC	5 cut(s)	128, 652, 764, 972, 1035
HapII	CCGG	1 cut(s)	440
HincII	GTYRAC	2 cut(s)	607, 1092
HindII	GTYRAC	2 cut(s)	607, 1092
HindIII	AAGCTT	1 cut(s)	204
HpaI	GTTAAC	1 cut(s)	607
HpaII	CCGG	1 cut(s)	440
HphI	GGTGA	1 cut(s)	851
Hpy166II	GTNNAC	3 cut(s)	607, 984, 1092
Hpy188I	TCNGA	4 cut(s)	378, 450, 619, 735
Hpy188III	TCNNGA	9 cut(s)	440, 482, 562, 893, 999, 1015, 1045, 1185, 1347
Hpy8I	GTNNAC	3 cut(s)	607, 984, 1092
HpyAV	CCTTC	5 cut(s)	222, 353, 493, 559, 735
HpyCH4III	ACNGT	3 cut(s)	839, 1082, 1158
HpyCH4IV	ACGT	2 cut(s)	78, 1177
HpyCH4V	TGCA	8 cut(s)	455, 640, 707, 1030, 1275, 1403, 1463, 1475
HpyF10VI	GCNNNNNNNGC	7 cut(s)	407, 416, 641, 1292, 1391, 1400, 1436
HpyF3I	CTNAG	3 cut(s)	471, 788, 1229
HpySE526I	ACGT	2 cut(s)	78, 1177
Kpn2I	TCCGGA	1 cut(s)	439
Ksp22I	TGATCA	1 cut(s)	1480
KspAI	GTTAAC	1 cut(s)	607
Kzo9I	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
LmnI	GCTCC	4 cut(s)	508, 1161, 1291, 1328
Lsp1109I	GCAGC	2 cut(s)	719, 1014
LweI	GCATC	1 cut(s)	944
MaeI	CTAG	6 cut(s)	18, 407, 482, 645, 999, 1341
MaeII	ACGT	2 cut(s)	78, 1177
MaeIII	GTNAC	1 cut(s)	1178
MalI	GATC	5 cut(s)	770, 810, 1043, 1065, 1482
MboI	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
MfeI	CAATTG	1 cut(s)	1476
MflI	RGATCY	1 cut(s)	1041
MhlI	GDGCHC	1 cut(s)	1288
MlsI	TGGCCA	1 cut(s)	128
MluCI	AATT	8 cut(s)	388, 394, 429, 459, 571, 842, 1464, 1476
MluNI	TGGCCA	1 cut(s)	128
MlyI	GAGTC	5 cut(s)	388, 437, 494, 989, 1197
MmeI	TCCRAC	2 cut(s)	605, 807
Mox20I	TGGCCA	1 cut(s)	128
MroI	TCCGGA	1 cut(s)	439
MscI	TGGCCA	1 cut(s)	128
MseI	TTAA	8 cut(s)	23, 114, 161, 606, 776, 852, 1304, 1467
Msp20I	TGGCCA	1 cut(s)	128
MspA1I	CMGCKG	1 cut(s)	238
MspI	CCGG	1 cut(s)	440
MspR9I	CCNGG	1 cut(s)	532
MunI	CAATTG	1 cut(s)	1476
Mva1269I	GAATGC	2 cut(s)	340, 1465
MvaI	CCWGG	1 cut(s)	532
MvnI	CGCG	1 cut(s)	1416
MwoI	GCNNNNNNNGC	7 cut(s)	407, 416, 641, 1292, 1391, 1400, 1436
NcoI	CCATGG	1 cut(s)	1036
NdeI	CATATG	1 cut(s)	611
NdeII	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
NheI	GCTAGC	1 cut(s)	406
NlaIV	GGNNCC	5 cut(s)	504, 557, 1287, 1324, 1384
NmeAIII	GCCGAG	1 cut(s)	790
NspI	RCATGY	2 cut(s)	1059, 1439
NspV	TTCGAA	1 cut(s)	739
PagI	TCATGA	1 cut(s)	892
PciI	ACATGT	1 cut(s)	1055
PcsI	WCGNNNNNNNCGW	1 cut(s)	1183
PctI	GAATGC	2 cut(s)	340, 1465
PfeI	GAWTC	5 cut(s)	187, 655, 736, 944, 1373
PflMI	CCANNNNNTGG	1 cut(s)	285
PfoI	TCCNGGA	1 cut(s)	530
PkrI	GCNGC	3 cut(s)	709, 974, 1029
PleI	GAGTC	5 cut(s)	387, 437, 493, 988, 1196
PpsI	GAGTC	5 cut(s)	387, 437, 493, 988, 1196
Ppu21I	YACGTR	1 cut(s)	79
PpuMI	RGGWCCY	2 cut(s)	556, 1406
PscI	ACATGT	1 cut(s)	1055
PshAI	GACNNNNGTC	1 cut(s)	1242
PsiI	TTATAA	1 cut(s)	465
Psp5II	RGGWCCY	2 cut(s)	556, 1406
Psp6I	CCWGG	1 cut(s)	530
PspGI	CCWGG	1 cut(s)	530
PspN4I	GGNNCC	5 cut(s)	504, 557, 1287, 1324, 1384
PspPI	GGNCC	3 cut(s)	556, 1033, 1406
PspPPI	RGGWCCY	2 cut(s)	556, 1406
PstI	CTGCAG	1 cut(s)	1032
PstNI	CAGNNNCTG	1 cut(s)	1027
PsuI	RGATCY	1 cut(s)	1041
PvuII	CAGCTG	1 cut(s)	238
RsaI	GTAC	1 cut(s)	295
RsaNI	GTAC	1 cut(s)	294
SaqAI	TTAA	8 cut(s)	23, 114, 161, 606, 776, 852, 1304, 1467
SatI	GCNGC	3 cut(s)	708, 973, 1028
Sau3AI	GATC	5 cut(s)	768, 808, 1041, 1063, 1480
Sau96I	GGNCC	3 cut(s)	556, 1033, 1406
SchI	GAGTC	5 cut(s)	388, 437, 494, 989, 1197
ScrFI	CCNGG	1 cut(s)	532
SduI	GDGCHC	1 cut(s)	1288
SfaNI	GCATC	1 cut(s)	944
SfcI	CTRYAG	2 cut(s)	672, 1028
SfuI	TTCGAA	1 cut(s)	739
SinI	GGWCC	2 cut(s)	556, 1406
SmlI	CTYRAG	3 cut(s)	201, 948, 1045
SmoI	CTYRAG	3 cut(s)	201, 948, 1045
Sse9I	AATT	8 cut(s)	388, 394, 429, 459, 571, 842, 1464, 1476
SsiI	CCGC	4 cut(s)	170, 864, 973, 1416
SspI	AATATT	1 cut(s)	934
SspMI	CTAG	6 cut(s)	18, 407, 482, 645, 999, 1341
StyD4I	CCNGG	1 cut(s)	530
StyI	CCWWGG	2 cut(s)	350, 1036
TaaI	ACNGT	3 cut(s)	839, 1082, 1158
TaiI	ACGT	2 cut(s)	81, 1180
TaqI	TCGA	2 cut(s)	739, 811
TasI	AATT	8 cut(s)	388, 394, 429, 459, 571, 842, 1464, 1476
TauI	GCSGC	1 cut(s)	975
TfiI	GAWTC	5 cut(s)	187, 655, 736, 944, 1373
Tru1I	TTAA	8 cut(s)	23, 114, 161, 606, 776, 852, 1304, 1467
Tru9I	TTAA	8 cut(s)	23, 114, 161, 606, 776, 852, 1304, 1467
TscAI	CASTG	1 cut(s)	915
TseI	GCWGC	2 cut(s)	707, 1027
TspDTI	ATGAA	3 cut(s)	66, 564, 1319
TspRI	CASTG	1 cut(s)	915
Van91I	CCANNNNNTGG	1 cut(s)	285
VpaK11BI	GGWCC	2 cut(s)	556, 1406
XagI	CCTNNNNNAGG	1 cut(s)	563
XapI	RAATTY	4 cut(s)	388, 459, 571, 842
XbaI	TCTAGA	2 cut(s)	481, 998
XceI	RCATGY	2 cut(s)	1059, 1439
XspI	CTAG	6 cut(s)	18, 407, 482, 645, 999, 1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.