Vacuolar protein sorting-associated protein VTA1 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G15190 |
| fragaria_vesca | FvH4_3g19430 |
| malus_domestica | MD03G1232600.v1.1 MD11G1253300.v1.1 |
| prunus_persica | Prupe.4G176000_v2.0.a1 |
| pyrus_communis | pycom03g17940 pycom11g22450 |
| rosa_chinensis | RchiOBHm_Chr5g0032711 |
| rosa_laevigata | RLG00000022904 RLG00000033418 |
| rosa_multiflora | Rmu_sc0002292.1_g000007 Rmu_ssc0000242.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00047390 Rroxscaffold_1G00047850 Rroxscaffold_2G00126870 |
| rosa_rugosa | Rorug01G0128400 Rorug04G0017100 Rorug05G0133200 Rorug05G0268300 Rorug05G0268400 Rorug05G0268500 |
| rosa_samantha | Rh1DG018700 Rh1DG018800 Rh2AG155500 Rh2BG161800 Rh2BG417900 Rh2DG161100 Rh4CG241300 Rh4CG241400 Rh4DG279300 Rh5AG225700 Rh5AG312200 Rh5AG344000 Rh5AG482400 Rh5AG537200 Rh5BG226900 Rh5BG388200 Rh5BG503200 Rh5CG214800 Rh5CG254500 Rh5CG275300 Rh5CG360900 Rh5CG526500 Rh5DG231500 |
| rosa_wichuraiana | Rw5G020690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 95 |
| AcuI | CTGAAG | 2 cut(s) | 185, 243 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 57, 95, 121 |
| AgsI | TTSAA | 2 cut(s) | 233, 290 |
| AluBI | AGCT | 3 cut(s) | 77, 229, 299 |
| AluI | AGCT | 3 cut(s) | 77, 229, 299 |
| Alw21I | GWGCWC | 1 cut(s) | 188 |
| Alw44I | GTGCAC | 1 cut(s) | 184 |
| ApaLI | GTGCAC | 1 cut(s) | 184 |
| ApeKI | GCWGC | 1 cut(s) | 226 |
| AspLEI | GCGC | 3 cut(s) | 94, 130, 246 |
| AsuHPI | GGTGA | 1 cut(s) | 101 |
| BaeGI | GKGCMC | 1 cut(s) | 188 |
| BauI | CACGAG | 1 cut(s) | 300 |
| BbsI | GAAGAC | 1 cut(s) | 249 |
| Bbv12I | GWGCWC | 1 cut(s) | 188 |
| BbvI | GCAGC | 1 cut(s) | 238 |
| BccI | CCATC | 3 cut(s) | 115, 139, 317 |
| BfoI | RGCGCY | 2 cut(s) | 131, 247 |
| BisI | GCNGC | 1 cut(s) | 227 |
| BlsI | GCNGC | 1 cut(s) | 228 |
| BpiI | GAAGAC | 1 cut(s) | 249 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 57, 95, 121 |
| Bse3DI | GCAATG | 1 cut(s) | 156 |
| BseGI | GGATG | 2 cut(s) | 10, 328 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 57, 95, 121 |
| BseMI | GCAATG | 1 cut(s) | 156 |
| BseMII | CTCAG | 1 cut(s) | 188 |
| BseRI | GAGGAG | 2 cut(s) | 41, 329 |
| BseSI | GKGCMC | 1 cut(s) | 188 |
| BseXI | GCAGC | 1 cut(s) | 238 |
| BsiHKAI | GWGCWC | 1 cut(s) | 188 |
| BslFI | GGGAC | 1 cut(s) | 34 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 57, 95, 121 |
| BsmFI | GGGAC | 1 cut(s) | 34 |
| Bsp1286I | GDGCHC | 1 cut(s) | 188 |
| Bsp143I | GATC | 1 cut(s) | 54 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BspHI | TCATGA | 1 cut(s) | 219 |
| BsrDI | GCAATG | 1 cut(s) | 156 |
| BssMI | GATC | 1 cut(s) | 54 |
| BssSI | CACGAG | 1 cut(s) | 300 |
| Bst2BI | CACGAG | 1 cut(s) | 300 |
| Bst4CI | ACNGT | 1 cut(s) | 72 |
| BstDEI | CTNAG | 2 cut(s) | 174, 247 |
| BstF5I | GGATG | 2 cut(s) | 10, 328 |
| BstH2I | RGCGCY | 2 cut(s) | 131, 247 |
| BstHHI | GCGC | 3 cut(s) | 94, 130, 246 |
| BstKTI | GATC | 1 cut(s) | 57 |
| BstMBI | GATC | 1 cut(s) | 54 |
| BstNSI | RCATGY | 1 cut(s) | 269 |
| BstSLI | GKGCMC | 1 cut(s) | 188 |
| BstV1I | GCAGC | 1 cut(s) | 238 |
| BstV2I | GAAGAC | 1 cut(s) | 249 |
| BtsCI | GGATG | 2 cut(s) | 10, 328 |
| CciI | TCATGA | 1 cut(s) | 219 |
| CfoI | GCGC | 3 cut(s) | 94, 130, 246 |
| CviAII | CATG | 3 cut(s) | 95, 220, 266 |
| CviJI | RGCY | 6 cut(s) | 77, 163, 229, 293, 299, 309 |
| CviKI_1 | RGCY | 6 cut(s) | 77, 163, 229, 293, 299, 309 |
| DdeI | CTNAG | 2 cut(s) | 174, 247 |
| DpnI | GATC | 1 cut(s) | 56 |
| DpnII | GATC | 1 cut(s) | 54 |
| Eco57I | CTGAAG | 2 cut(s) | 185, 243 |
| FaeI | CATG | 3 cut(s) | 98, 223, 269 |
| FaiI | YATR | 4 cut(s) | 96, 145, 221, 267 |
| FaqI | GGGAC | 1 cut(s) | 34 |
| FatI | CATG | 3 cut(s) | 94, 219, 265 |
| Fnu4HI | GCNGC | 1 cut(s) | 227 |
| FokI | GGATG | 2 cut(s) | 17, 335 |
| Fsp4HI | GCNGC | 1 cut(s) | 227 |
| GlaI | GCGC | 3 cut(s) | 93, 129, 245 |
| GluI | GCNGC | 1 cut(s) | 227 |
| HaeII | RGCGCY | 2 cut(s) | 131, 247 |
| HhaI | GCGC | 3 cut(s) | 94, 130, 246 |
| Hin1II | CATG | 3 cut(s) | 98, 223, 269 |
| Hin6I | GCGC | 3 cut(s) | 92, 128, 244 |
| HinP1I | GCGC | 3 cut(s) | 92, 128, 244 |
| HinfI | GANTC | 1 cut(s) | 169 |
| HphI | GGTGA | 1 cut(s) | 101 |
| Hpy166II | GTNNAC | 1 cut(s) | 186 |
| Hpy188I | TCNGA | 3 cut(s) | 36, 177, 262 |
| Hpy188III | TCNNGA | 2 cut(s) | 220, 302 |
| Hpy8I | GTNNAC | 1 cut(s) | 186 |
| HpyAV | CCTTC | 2 cut(s) | 116, 299 |
| HpyCH4III | ACNGT | 1 cut(s) | 72 |
| HpyCH4V | TGCA | 1 cut(s) | 186 |
| HpyF3I | CTNAG | 2 cut(s) | 174, 247 |
| Hsp92II | CATG | 3 cut(s) | 98, 223, 269 |
| HspAI | GCGC | 3 cut(s) | 92, 128, 244 |
| Kzo9I | GATC | 1 cut(s) | 54 |
| LmnI | GCTCC | 1 cut(s) | 154 |
| LpnPI | CCDG | 3 cut(s) | 43, 102, 120 |
| Lsp1109I | GCAGC | 1 cut(s) | 238 |
| MalI | GATC | 1 cut(s) | 56 |
| MboI | GATC | 1 cut(s) | 54 |
| MboII | GAAGA | 2 cut(s) | 178, 249 |
| MhlI | GDGCHC | 1 cut(s) | 188 |
| MluCI | AATT | 1 cut(s) | 199 |
| MslI | CAYNNNNRTG | 1 cut(s) | 270 |
| NdeII | GATC | 1 cut(s) | 54 |
| NlaIII | CATG | 3 cut(s) | 98, 223, 269 |
| NspI | RCATGY | 1 cut(s) | 269 |
| PagI | TCATGA | 1 cut(s) | 219 |
| PfeI | GAWTC | 1 cut(s) | 169 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 95 |
| PkrI | GCNGC | 1 cut(s) | 228 |
| RseI | CAYNNNNRTG | 1 cut(s) | 270 |
| SatI | GCNGC | 1 cut(s) | 227 |
| Sau3AI | GATC | 1 cut(s) | 54 |
| SduI | GDGCHC | 1 cut(s) | 188 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 270 |
| Sse9I | AATT | 1 cut(s) | 199 |
| TaaI | ACNGT | 1 cut(s) | 72 |
| TaqI | TCGA | 4 cut(s) | 79, 100, 119, 139 |
| TasI | AATT | 1 cut(s) | 199 |
| TfiI | GAWTC | 1 cut(s) | 169 |
| TseI | GCWGC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 1 cut(s) | 236 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 95 |
| VneI | GTGCAC | 1 cut(s) | 184 |
| XceI | RCATGY | 1 cut(s) | 269 |