Rmu_sc0005366.1_g000011

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005366.1
OG0004773
Physical Location & Seq
Reverse (-)
49692 .. 54840
5149 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1698 bp
atgaaagtatcccctggtgaattgagaggcctttccaacggttcatcttatacagagcctgtagctggcccttcaagagacttgatggctcggcccctaccatccgaaggggacgaagaggttgttggttcaaaaggagttattaagagagttgagtttgtccgactaatagcaaaggccctatattctcttggctataacaaaagtggtgctcgtctggaggaagagtctggaatatctttgcactctcctgtggtaaatcgatttatggagcaaattctcaacggcaattgggatgaaagtgtcgtcacgttgcagaaaattggtctatctgatgaaaatattgctaaatctgcttcctttctgatattggagcagaagttttttgaacttctagatgagaaaaaggacatggatgcattaaagacattgaggactgagattgcacctctttgcataaatggtagcagagttcgtgagctttcatcgtgcatagttgctccttcatttgttgggtcccccagtcaaaacactgtgagggccaagtctcgaccaaagttattggaggaattgcaaaagctgctcccaccaactgttatgatacttgaaagaaggttggaacatttagttgaacaagccctcgtcttacagcgtgatacttgcatttttcacaactctttgaacgaggacatgtctttgtacactgatcatcagtgtgggagagatcagattccttctcgaacagtgcaggtattacaagaccacagtgatgaagtctggtttgttcaattttcacacaatgggaaattcttggcttcatcatcaagtgataaatcagctattatatgggaggttgatgtgaatggctgggtttcattaaagcatagactagttggtcaccataaaccggtttgctctgtttcatggagtcctaatgactctcagctcctcacttgtggagtggaggaggttgtcaggcgttgggatgtctctactggtgaatgcctccatgtttatgaaaaacctggccttggtctattgtcatgtggatggtttccagatgggaaatggatattctctggtgtcactgacaagagtatctgcacgtgggagttagaagggaaagagctggagtgttggaaagggcagcgaacttcaaaaatctctgatttggaaataactagtgatggaaagaaaatattaagtacttgtagagaaaatgctatattgctacttgacagggaagctaaagttgacatactacttgaagaggataaacctataacttctttttctttatcaagcgatgataagttgttgttggttaatcttctgaaccaagaaattcatctctggagcatagcaggtgaagtcaagcttgttgccaagtaccaaggtcacaaacgcacccgatttgtcatcaggtcttgttttggtggactcgaacaagcattcattgctagtggtagtgaggattcacaggtttatgtatggcatagatgctcaggggagctcatagaggcattgccaggacattctggagctgttaattgtgtcagctggaatccaaaaaacccacacatgttagcctcagctagtgacgaccgtacaattcggatatggggactaaatgagataaaagtgaaacacaaggatgcacacagcaatggcatccattattgcaatgggggaagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

565

Amino Acids

63.09

Weight (kDa)

6.02

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LisH_WDR26 PF23627 40 - 83 9.3e-22 WDR26 Lis-homology motif
Beta-prop_RIG_2nd PF23775 208 - 354 5.3e-06 RIG second beta-propeller
WD40_Prp19 PF24814 246 - 411 8.8e-16 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 246 - 338 4.2e-11 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 247 - 376 1.3e-12 WDHD1 first WD40 domain
Beta-prop_EML PF23409 248 - 415 4e-06 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 248 - 283 2.8e-07 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 248 - 372 1.8e-18 WDR3 first beta-propeller domain
Beta-prop_IFT122_1st PF23381 248 - 375 6.6e-09 IFT122 first beta-propeller
Beta-prop_TEP1_2nd PF25047 248 - 337 1.2e-08 TEP-1 second beta-propeller
WD40_Gbeta PF25391 250 - 374 6.5e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 252 - 516 7.6e-46 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 255 - 413 3.4e-26 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 259 - 371 1.3e-08 WDR3 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 290 - 377 3.3e-06 CAF1B/HIR1 beta-propeller domain
WD40_Gbeta PF25391 291 - 498 1.5e-06 G protein beta WD-40 repeat protein
WDR55 PF24796 297 - 544 3.3e-11 WDR55
Beta-prop_Aladin PF25460 300 - 410 1.2e-10 Aladin seven-bladed propeller
WD40_CDC20-Fz PF24807 306 - 415 5.2e-06 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 307 - 465 1.7e-12 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd PF25172 353 - 543 1.2e-08 WDR3 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 415 - 546 6.8e-16 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 421 - 561 4.4e-06 TEP-1 second beta-propeller
EIF3I PF24805 466 - 547 1.8e-07 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 482 - 551 4.8e-07 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 483 - 547 8.1e-11 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 483 - 551 2.6e-11 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 483 - 551 1e-06 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 485 - 548 8.3e-15 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 497 - 561 2.1e-09 WDR5 beta-propeller domain
WD40 PF00400 504 - 541 8.5e-10 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1355
AasI GACNNNNNNGTC 1 cut(s) 894
Acc36I ACCTGC 2 cut(s) 739, 1355
AcsI RAATTY 3 cut(s) 276, 806, 1344
AcvI CACGTG 1 cut(s) 1107
AfaI GTAC 4 cut(s) 701, 1207, 1391, 1609
AfiI CCNNNNNNNGG 4 cut(s) 65, 107, 907, 1031
AflIII ACRYGT 2 cut(s) 690, 1581
AgeI ACCGGT 1 cut(s) 907
AgsI TTSAA 9 cut(s) 75, 132, 389, 608, 632, 682, 788, 1158, 1268
AhlI ACTAGT 2 cut(s) 889, 1181
AjnI CCWGG 3 cut(s) 13, 1024, 1528
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
Alw21I GWGCWC 2 cut(s) 214, 1515
Alw26I GTCTC 3 cut(s) 72, 552, 994
AlwNI CAGNNNCTG 1 cut(s) 59
AoxI GGCC 6 cut(s) 28, 67, 92, 177, 540, 1027
ApeKI GCWGC 2 cut(s) 580, 1147
ApoI RAATTY 3 cut(s) 276, 806, 1344
AsiGI ACCGGT 1 cut(s) 907
AspS9I GGNCC 5 cut(s) 68, 93, 178, 516, 540
AsuHPI GGTGA 4 cut(s) 29, 890, 1010, 1379
AvaII GGWCC 1 cut(s) 516
BaeI ACNNNNGTAYC 2 cut(s) 1081, 1114
BanII GRGCYC 1 cut(s) 1515
BbrPI CACGTG 1 cut(s) 1107
Bbv12I GWGCWC 2 cut(s) 214, 1515
BbvCI CCTCAGC 1 cut(s) 1591
BbvI GCAGC 2 cut(s) 567, 1159
BccI CCATC 5 cut(s) 79, 109, 1044, 1055, 1181
BceAI ACGGC 1 cut(s) 301
BciT130I CCWGG 3 cut(s) 15, 1026, 1530
BciVI GTATCC 1 cut(s) 19
BclI TGATCA 1 cut(s) 706
BcoDI GTCTC 3 cut(s) 72, 552, 994
BcuI ACTAGT 2 cut(s) 889, 1181
BfaI CTAG 5 cut(s) 395, 890, 1182, 1461, 1596
BfmI CTRYAG 1 cut(s) 60
BfuAI ACCTGC 2 cut(s) 739, 1355
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 2 cut(s) 581, 1148
BlsI GCNGC 2 cut(s) 582, 1149
BmcAI AGTACT 1 cut(s) 1207
Bme1390I CCNGG 3 cut(s) 15, 1026, 1530
Bme18I GGWCC 1 cut(s) 516
BmgT120I GGNCC 5 cut(s) 68, 93, 178, 516, 540
BmiI GGNNCC 3 cut(s) 95, 517, 518
BmrFI CCNGG 3 cut(s) 15, 1026, 1530
BmrI ACTGGG 1 cut(s) 516
BmsI GCATC 4 cut(s) 406, 1490, 1645, 1680
BmuI ACTGGG 1 cut(s) 516
BpmI CTGGAG 4 cut(s) 239, 1151, 1375, 1560
Bpu10I CCTNAGC 2 cut(s) 1504, 1591
Bsa29I ATCGAT 1 cut(s) 262
BsaAI YACGTR 1 cut(s) 1107
BsaJI CCNNGG 3 cut(s) 13, 1030, 1393
BsaWI WCCGGW 1 cut(s) 907
BsaXI ACNNNNNCTCC 4 cut(s) 212, 242, 365, 395
Bsc4I CCNNNNNNNGG 4 cut(s) 65, 107, 907, 1031
Bse118I RCCGGY 1 cut(s) 907
Bse1I ACTGG 2 cut(s) 522, 1000
Bse3DI GCAATG 4 cut(s) 1455, 1523, 1672, 1690
BseBI CCWGG 3 cut(s) 15, 1026, 1530
BseCI ATCGAT 1 cut(s) 262
BseDI CCNNGG 3 cut(s) 13, 1030, 1393
BseGI GGATG 7 cut(s) 101, 301, 421, 991, 1055, 1660, 1671
BseLI CCNNNNNNNGG 4 cut(s) 65, 107, 907, 1031
BseMI GCAATG 4 cut(s) 1455, 1523, 1672, 1690
BseMII CTCAG 4 cut(s) 429, 956, 1518, 1605
BseNI ACTGG 2 cut(s) 522, 1000
BseRI GAGGAG 2 cut(s) 938, 980
BseXI GCAGC 2 cut(s) 567, 1159
BseYI CCCAGC 1 cut(s) 867
BsgI GTGCAG 2 cut(s) 767, 1087
Bsh1285I CGRYCG 1 cut(s) 1606
BshFI GGCC 6 cut(s) 30, 69, 94, 179, 542, 1029
BshTI ACCGGT 1 cut(s) 907
BshVI ATCGAT 1 cut(s) 262
BsiEI CGRYCG 1 cut(s) 1606
BsiHKAI GWGCWC 2 cut(s) 214, 1515
BsiSI CCGG 1 cut(s) 908
BslFI GGGAC 3 cut(s) 125, 502, 1638
BslI CCNNNNNNNGG 4 cut(s) 65, 107, 907, 1031
BsmAI GTCTC 3 cut(s) 72, 552, 994
BsmFI GGGAC 3 cut(s) 125, 502, 1638
BsmI GAATGC 2 cut(s) 1007, 1451
BsnI GGCC 6 cut(s) 30, 69, 94, 179, 542, 1029
Bsp1286I GDGCHC 2 cut(s) 214, 1515
Bsp1407I TGTACA 1 cut(s) 699
Bsp143I GATC 2 cut(s) 706, 724
BspANI GGCC 6 cut(s) 30, 69, 94, 179, 542, 1029
BspCNI CTCAG 4 cut(s) 430, 955, 1517, 1604
BspDI ATCGAT 1 cut(s) 262
BspLI GGNNCC 3 cut(s) 95, 517, 518
BspMI ACCTGC 2 cut(s) 739, 1355
BsrDI GCAATG 4 cut(s) 1455, 1523, 1672, 1690
BsrFI RCCGGY 1 cut(s) 907
BsrGI TGTACA 1 cut(s) 699
BsrI ACTGG 2 cut(s) 522, 1000
BssAI RCCGGY 1 cut(s) 907
BssECI CCNNGG 3 cut(s) 13, 1030, 1393
BssMI GATC 2 cut(s) 706, 724
BssT1I CCWWGG 2 cut(s) 1030, 1393
Bst2UI CCWGG 3 cut(s) 15, 1026, 1530
Bst4CI ACNGT 6 cut(s) 41, 535, 595, 745, 767, 1607
Bst6I CTCTTC 3 cut(s) 111, 219, 1263
BstAPI GCANNNNNTGC 2 cut(s) 580, 1457
BstAUI TGTACA 1 cut(s) 699
BstBAI YACGTR 1 cut(s) 1107
BstC8I GCNNGC 1 cut(s) 67
BstDEI CTNAG 4 cut(s) 438, 942, 1504, 1591
BstEII GGTNACC 1 cut(s) 896
BstF5I GGATG 7 cut(s) 101, 301, 421, 991, 1055, 1660, 1671
BstKTI GATC 2 cut(s) 709, 727
BstMAI GTCTC 3 cut(s) 72, 552, 994
BstMBI GATC 2 cut(s) 706, 724
BstMCI CGRYCG 1 cut(s) 1606
BstMWI GCNNNNNNNGC 3 cut(s) 353, 580, 1457
BstNI CCWGG 3 cut(s) 15, 1026, 1530
BstNSI RCATGY 2 cut(s) 694, 1585
BstPI GGTNACC 1 cut(s) 896
BstSCI CCNGG 3 cut(s) 13, 1024, 1528
BstSFI CTRYAG 1 cut(s) 60
BstV1I GCAGC 2 cut(s) 567, 1159
Bsu15I ATCGAT 1 cut(s) 262
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 6 cut(s) 30, 69, 94, 179, 542, 1029
BsuTUI ATCGAT 1 cut(s) 262
BtgZI GCGATG 1 cut(s) 1320
BtsCI GGATG 7 cut(s) 101, 301, 421, 991, 1055, 1660, 1671
BtsIMutI CAGTG 6 cut(s) 531, 702, 719, 750, 772, 1086
BveI ACCTGC 2 cut(s) 739, 1355
Cac8I GCNNGC 1 cut(s) 67
CaiI CAGNNNCTG 1 cut(s) 59
Cfr10I RCCGGY 1 cut(s) 907
Cfr13I GGNCC 5 cut(s) 68, 93, 178, 516, 540
ClaI ATCGAT 1 cut(s) 262
Csp6I GTAC 4 cut(s) 700, 1206, 1390, 1608
CspAI ACCGGT 1 cut(s) 907
CviAII CATG 6 cut(s) 412, 691, 924, 1010, 1044, 1582
CviQI GTAC 4 cut(s) 700, 1206, 1390, 1608
DdeI CTNAG 4 cut(s) 438, 942, 1504, 1591
DpnI GATC 2 cut(s) 708, 726
DpnII GATC 2 cut(s) 706, 724
DrdI GACNNNNNNGTC 1 cut(s) 894
DseDI GACNNNNNNGTC 1 cut(s) 894
Eam1104I CTCTTC 3 cut(s) 111, 219, 1263
EarI CTCTTC 3 cut(s) 111, 219, 1263
Ecl136II GAGCTC 1 cut(s) 1513
Eco130I CCWWGG 2 cut(s) 1030, 1393
Eco147I AGGCCT 1 cut(s) 30
Eco24I GRGCYC 1 cut(s) 1515
Eco47I GGWCC 1 cut(s) 516
Eco53kI GAGCTC 1 cut(s) 1513
Eco72I CACGTG 1 cut(s) 1107
Eco91I GGTNACC 1 cut(s) 896
EcoICRI GAGCTC 1 cut(s) 1513
EcoO109I RGGNCCY 2 cut(s) 178, 516
EcoO65I GGTNACC 1 cut(s) 896
EcoRII CCWGG 3 cut(s) 13, 1024, 1528
EcoT14I CCWWGG 2 cut(s) 1030, 1393
EcoT22I ATGCAT 1 cut(s) 421
EcoT38I GRGCYC 1 cut(s) 1515
ErhI CCWWGG 2 cut(s) 1030, 1393
FaeI CATG 6 cut(s) 415, 694, 927, 1013, 1047, 1585
FalI AAGNNNNNCTT 2 cut(s) 1362, 1394
FaqI GGGAC 3 cut(s) 125, 502, 1638
FatI CATG 6 cut(s) 411, 690, 923, 1009, 1043, 1581
FbaI TGATCA 1 cut(s) 706
Fnu4HI GCNGC 2 cut(s) 581, 1148
FokI GGATG 7 cut(s) 88, 308, 428, 998, 1062, 1658, 1667
FriOI GRGCYC 1 cut(s) 1515
Fsp4HI GCNGC 2 cut(s) 581, 1148
FspBI CTAG 5 cut(s) 395, 890, 1182, 1461, 1596
GluI GCNGC 2 cut(s) 581, 1148
GsaI CCCAGC 1 cut(s) 871
GsuI CTGGAG 4 cut(s) 239, 1151, 1375, 1560
HaeIII GGCC 6 cut(s) 30, 69, 94, 179, 542, 1029
HapII CCGG 1 cut(s) 908
Hin1II CATG 6 cut(s) 415, 694, 927, 1013, 1047, 1585
HincII GTYRAC 1 cut(s) 1255
HindII GTYRAC 1 cut(s) 1255
HindIII AAGCTT 1 cut(s) 1376
HinfI GANTC 7 cut(s) 227, 730, 928, 938, 1440, 1475, 1564
HpaII CCGG 1 cut(s) 908
HphI GGTGA 4 cut(s) 29, 890, 1010, 1379
Hpy166II GTNNAC 3 cut(s) 702, 1255, 1439
Hpy188I TCNGA 8 cut(s) 106, 164, 334, 366, 729, 1168, 1335, 1617
Hpy8I GTNNAC 3 cut(s) 702, 1255, 1439
HpyAV CCTTC 6 cut(s) 81, 101, 513, 606, 744, 1112
HpyCH4III ACNGT 6 cut(s) 41, 535, 595, 745, 767, 1607
HpyCH4IV ACGT 2 cut(s) 311, 1106
HpyF10VI GCNNNNNNNGC 3 cut(s) 353, 580, 1457
HpyF3I CTNAG 4 cut(s) 438, 942, 1504, 1591
HpySE526I ACGT 2 cut(s) 311, 1106
Hsp92II CATG 6 cut(s) 415, 694, 927, 1013, 1047, 1585
KflI GGGWCCC 1 cut(s) 516
Ksp22I TGATCA 1 cut(s) 706
Kzo9I GATC 2 cut(s) 706, 724
LmnI GCTCC 8 cut(s) 271, 373, 505, 588, 951, 1356, 1510, 1541
Lsp1109I GCAGC 2 cut(s) 567, 1159
LweI GCATC 4 cut(s) 406, 1490, 1645, 1680
MaeI CTAG 5 cut(s) 395, 890, 1182, 1461, 1596
MaeII ACGT 2 cut(s) 311, 1106
MaeIII GTNAC 5 cut(s) 307, 896, 1084, 1397, 1598
MalI GATC 2 cut(s) 708, 726
MboI GATC 2 cut(s) 706, 724
MboII GAAGA 4 cut(s) 128, 236, 1280, 1322
MfeI CAATTG 1 cut(s) 289
MhlI GDGCHC 2 cut(s) 214, 1515
MlyI GAGTC 4 cut(s) 236, 932, 937, 1434
MmeI TCCRAC 4 cut(s) 60, 187, 597, 1118
Mph1103I ATGCAT 1 cut(s) 421
MseI TTAA 6 cut(s) 144, 422, 878, 1202, 1326, 1548
MslI CAYNNNNRTG 6 cut(s) 714, 768, 1014, 1048, 1653, 1665
MspA1I CMGCKG 1 cut(s) 1560
MspI CCGG 1 cut(s) 908
MspR9I CCNGG 3 cut(s) 15, 1026, 1530
MunI CAATTG 1 cut(s) 289
Mva1269I GAATGC 2 cut(s) 1007, 1451
MvaI CCWGG 3 cut(s) 15, 1026, 1530
MwoI GCNNNNNNNGC 3 cut(s) 353, 580, 1457
NdeII GATC 2 cut(s) 706, 724
NlaIII CATG 6 cut(s) 415, 694, 927, 1013, 1047, 1585
NlaIV GGNNCC 3 cut(s) 95, 517, 518
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 5 cut(s) 307, 896, 1084, 1397, 1598
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 2 cut(s) 694, 1585
PaqCI CACCTGC 1 cut(s) 1355
PceI AGGCCT 1 cut(s) 30
PciI ACATGT 2 cut(s) 690, 1581
PctI GAATGC 2 cut(s) 1007, 1451
PfeI GAWTC 3 cut(s) 730, 1475, 1564
PinAI ACCGGT 1 cut(s) 907
PkrI GCNGC 2 cut(s) 582, 1149
PleI GAGTC 4 cut(s) 235, 932, 936, 1434
PmaCI CACGTG 1 cut(s) 1107
PmlI CACGTG 1 cut(s) 1107
PpsI GAGTC 4 cut(s) 235, 932, 936, 1434
Ppu21I YACGTR 1 cut(s) 1107
PpuMI RGGWCCY 1 cut(s) 516
PscI ACATGT 2 cut(s) 690, 1581
Psp124BI GAGCTC 1 cut(s) 1515
Psp5II RGGWCCY 1 cut(s) 516
Psp6I CCWGG 3 cut(s) 13, 1024, 1528
PspCI CACGTG 1 cut(s) 1107
PspEI GGTNACC 1 cut(s) 896
PspFI CCCAGC 1 cut(s) 867
PspGI CCWGG 3 cut(s) 13, 1024, 1528
PspN4I GGNNCC 3 cut(s) 95, 517, 518
PspPI GGNCC 5 cut(s) 68, 93, 178, 516, 540
PspPPI RGGWCCY 1 cut(s) 516
PstNI CAGNNNCTG 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 1560
RsaI GTAC 4 cut(s) 701, 1207, 1391, 1609
RsaNI GTAC 4 cut(s) 700, 1206, 1390, 1608
RseI CAYNNNNRTG 6 cut(s) 714, 768, 1014, 1048, 1653, 1665
SacI GAGCTC 1 cut(s) 1515
SaqAI TTAA 6 cut(s) 144, 422, 878, 1202, 1326, 1548
SatI GCNGC 2 cut(s) 581, 1148
Sau3AI GATC 2 cut(s) 706, 724
Sau96I GGNCC 5 cut(s) 68, 93, 178, 516, 540
ScaI AGTACT 1 cut(s) 1207
SchI GAGTC 4 cut(s) 236, 932, 937, 1434
ScrFI CCNGG 3 cut(s) 15, 1026, 1530
SduI GDGCHC 2 cut(s) 214, 1515
SfaNI GCATC 4 cut(s) 406, 1490, 1645, 1680
SfcI CTRYAG 1 cut(s) 60
SinI GGWCC 1 cut(s) 516
SmiMI CAYNNNNRTG 6 cut(s) 714, 768, 1014, 1048, 1653, 1665
SpeI ACTAGT 2 cut(s) 889, 1181
SseBI AGGCCT 1 cut(s) 30
SspI AATATT 2 cut(s) 343, 1200
SspMI CTAG 5 cut(s) 395, 890, 1182, 1461, 1596
SstI GAGCTC 1 cut(s) 1515
StuI AGGCCT 1 cut(s) 30
StyD4I CCNGG 3 cut(s) 13, 1024, 1528
StyI CCWWGG 2 cut(s) 1030, 1393
TaaI ACNGT 6 cut(s) 41, 535, 595, 745, 767, 1607
TaiI ACGT 2 cut(s) 314, 1109
TaqI TCGA 4 cut(s) 262, 550, 739, 1443
TatI WGTACW 2 cut(s) 699, 1205
TfiI GAWTC 3 cut(s) 730, 1475, 1564
Tru1I TTAA 6 cut(s) 144, 422, 878, 1202, 1326, 1548
Tru9I TTAA 6 cut(s) 144, 422, 878, 1202, 1326, 1548
TscAI CASTG 6 cut(s) 538, 709, 719, 750, 772, 1093
TseFI GTSAC 5 cut(s) 307, 896, 1084, 1397, 1598
TseI GCWGC 2 cut(s) 580, 1147
Tsp45I GTSAC 5 cut(s) 307, 896, 1084, 1397, 1598
TspRI CASTG 6 cut(s) 538, 709, 719, 750, 772, 1093
VpaK11BI GGWCC 1 cut(s) 516
XapI RAATTY 3 cut(s) 276, 806, 1344
XbaI TCTAGA 1 cut(s) 394
XceI RCATGY 2 cut(s) 694, 1585
XcmI CCANNNNNNNNNTGG 2 cut(s) 1065, 1682
XspI CTAG 5 cut(s) 395, 890, 1182, 1461, 1596
ZrmI AGTACT 1 cut(s) 1207
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.