Rmu_sc0005369.1_g000014

Exopolygalacturonase clone

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005369.1
OG0016557
Physical Location & Seq
Forward (+)
61633 .. 63592
1960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005369.1_g000014.1.cds

Sequence Viewer

Length: 1473 bp
atgtctatgggattgagctcgccaaacatggacaccgcaaggagattggaggctattcttctcgtaggcttagtttttctcgcttgcgcggccaatggtgcatcccgtggacatctttttggggttggtgcacctcgtcggagcctcactgatactacgaaccgaaaagtattcgacgtcacagccttcggtgctaagcccgaagccggcgattcaaaaggacgcaaaatgagagagcttcccggcggtggagatatagacgctcctctaccacaacttcccgtcgctggtggcggcgactccggcagcgatgatgggaatgatgacggttcgaatcccgatgctgacaatgatactggaatggcattcattaagacgtgggtggccgcatgcaggggagagtacaagggtccagcaaaggttcttattccaaaaggcacatttttggctggacctgttgtgttccaagggccatgcaccagctccaaggagccaatcgttttggaaattcagggagaagtgagagccaccaccgatttgagtgattattcctctcctgaatggatctcgttcgaaaatattgacggtttgattgtcaccggtgatggagttatcaatggccaaggcgagaaaacatggaacggtgccggctgccatagcgatgactgccctcattccccatccaacataaaattccagaaggttaagaatgcacttatcgaggggatcacatccttgaacagcaagtactttcattaccacatcaccgactccagcaacgttaccatgaacaatgtgcacattactgcccctggcgatagccctaacacagacggctgccacatcagtaattccgacaacgtcaaagtgatcaacagcatcatcggaaccggggacgactgcgtttccgtcggccagggcgcccgccaagttaccatcaacaacgttacttgcggccctggccatggcatcagtgttggaagtcttggtaagtacaaggacgagcagcccgtggtcggtgtcaccgtgaccaattgcacattgtcgaacactaccaacggcgccagaatcaaaacttgggccgggccgaacagaggagaagcaagaggaattatattcgataacctcgttttggaccatgtgaaagccccaattgtcatcgatcaacactatggagaaaagaaaagtgggggagacaataaaaatgcgaaggatccaaactccggaaagcaatccctatataagctcagtgatattcacttcagaaacattaagggcacctcgtcgcacaacgttgccgtgtcactatcatgcagcgctacaaacccttgcgacggggttgaattgaataacatcgacattgccttaggaggagccggcaccgccaaaaaaacagacgttgcatcggaatgttacaatgcaaaggttactactaagggcacaatgaatccagcagcaccagcctgccaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004553 GO:0004650 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0016787 GO:0016798 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

490

Amino Acids

51.18

Weight (kDa)

5.96

Isoelectric Point (pI)

36.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016557)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26010
malus_domestica MD03G1291400.v1.1 MD11G1306900.v1.1
prunus_persica Prupe.8G264500_v2.0.a1
pyrus_communis pycom03g23080 pycom11g26850
rosa_chinensis RchiOBHm_Chr6g0294381
rosa_laevigata RLG00000011876
rosa_multiflora Rmu_sc0005369.1_g000014
rosa_roxburghii Rroxscaffold_7G00173430
rosa_rugosa Rorug06G0243900
rosa_samantha Rh6AG356500 Rh6CG370500
rosa_wichuraiana Rw6G031070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 180
AccB1I GGYRCC 5 cut(s) 644, 920, 1061, 1277, 1379
AccII CGCG 1 cut(s) 89
AccIII TCCGGA 1 cut(s) 1223
AciI CCGC 8 cut(s) 36, 89, 246, 294, 387, 925, 954, 1383
AclI AACGTT 3 cut(s) 780, 945, 1293
AclWI GGATC 4 cut(s) 572, 734, 1208, 1221
AcoI YGGCCR 5 cut(s) 90, 384, 619, 913, 961
AcsI RAATTY 2 cut(s) 507, 692
AcuI CTGAAG 1 cut(s) 1246
AcyI GRCGYC 3 cut(s) 177, 921, 1062
AfaI GTAC 3 cut(s) 404, 749, 995
AfeI AGCGCT 1 cut(s) 1318
AgeI ACCGGT 1 cut(s) 599
AgsI TTSAA 4 cut(s) 216, 739, 1343, 1348
AjiI CACGTC 1 cut(s) 378
AjnI CCWGG 3 cut(s) 811, 915, 958
AjuI GAANNNNNNNTTGG 4 cut(s) 677, 709, 1060, 1092
AluBI AGCT 4 cut(s) 18, 238, 483, 1246
AluI AGCT 4 cut(s) 18, 238, 483, 1246
Alw21I GWGCWC 3 cut(s) 20, 133, 801
Alw26I GTCTC 1 cut(s) 1188
Alw44I GTGCAC 2 cut(s) 129, 797
AlwI GGATC 4 cut(s) 572, 734, 1208, 1221
Aor13HI TCCGGA 1 cut(s) 1223
Aor51HI AGCGCT 1 cut(s) 1318
AoxI GGCC 9 cut(s) 90, 384, 470, 619, 913, 955, 961, 1080, 1085
ApaLI GTGCAC 2 cut(s) 129, 797
ApeKI GCWGC 6 cut(s) 306, 651, 837, 1006, 1314, 1454
ApoI RAATTY 2 cut(s) 507, 692
AsiGI ACCGGT 1 cut(s) 599
AspLEI GCGC 4 cut(s) 89, 923, 1064, 1319
AspS9I GGNCC 7 cut(s) 410, 452, 470, 956, 1080, 1085, 1135
AsuC2I CCSGG 3 cut(s) 243, 892, 1084
AsuHPI GGTGA 4 cut(s) 589, 614, 757, 1015
AsuII TTCGAA 2 cut(s) 332, 573
AvaII GGWCC 3 cut(s) 410, 452, 1135
AxyI CCTNAGG 1 cut(s) 1366
BaeGI GKGCMC 4 cut(s) 133, 801, 1280, 1442
BalI TGGCCA 2 cut(s) 621, 963
BamHI GGATCC 1 cut(s) 1213
BanI GGYRCC 5 cut(s) 644, 920, 1061, 1277, 1379
BanII GRGCYC 1 cut(s) 20
Bbv12I GWGCWC 3 cut(s) 20, 133, 801
BbvI GCAGC 6 cut(s) 318, 638, 824, 1018, 1326, 1466
BccI CCATC 4 cut(s) 308, 599, 688, 944
BceAI ACGGC 3 cut(s) 850, 1075, 1283
BciT130I CCWGG 3 cut(s) 813, 917, 960
BclI TGATCA 1 cut(s) 870
BcnI CCSGG 3 cut(s) 243, 892, 1084
BcoDI GTCTC 1 cut(s) 1188
BfoI RGCGCY 3 cut(s) 924, 1065, 1320
BlpI GCTNAGC 1 cut(s) 195
BmcAI AGTACT 1 cut(s) 749
Bme1390I CCNGG 6 cut(s) 243, 813, 892, 917, 960, 1084
Bme18I GGWCC 3 cut(s) 410, 452, 1135
BmgBI CACGTC 1 cut(s) 378
BmgT120I GGNCC 7 cut(s) 410, 452, 470, 956, 1080, 1085, 1135
BmrFI CCNGG 6 cut(s) 243, 813, 892, 917, 960, 1084
BmsI GCATC 5 cut(s) 110, 331, 888, 978, 1412
BpmI CTGGAG 1 cut(s) 757
Bpu1102I GCTNAGC 1 cut(s) 195
Bpu14I TTCGAA 2 cut(s) 332, 573
BpuMI CCSGG 3 cut(s) 243, 892, 1084
Bsa29I ATCGAT 1 cut(s) 1161
BsaHI GRCGYC 3 cut(s) 177, 921, 1062
BsaWI WCCGGW 2 cut(s) 599, 1223
Bse118I RCCGGY 4 cut(s) 206, 599, 647, 1376
Bse1I ACTGG 1 cut(s) 361
Bse21I CCTNAGG 1 cut(s) 1366
Bse3DI GCAATG 1 cut(s) 1359
BseAI TCCGGA 1 cut(s) 1223
BseBI CCWGG 3 cut(s) 813, 917, 960
BseCI ATCGAT 1 cut(s) 1161
BseGI GGATG 3 cut(s) 101, 680, 731
BseMI GCAATG 1 cut(s) 1359
BseMII CTCAG 1 cut(s) 1261
BseNI ACTGG 1 cut(s) 361
BseRI GAGGAG 3 cut(s) 255, 1110, 1386
BseSI GKGCMC 4 cut(s) 133, 801, 1280, 1442
BseXI GCAGC 6 cut(s) 318, 638, 824, 1018, 1326, 1466
Bsh1236I CGCG 1 cut(s) 89
BshFI GGCC 9 cut(s) 92, 386, 472, 621, 915, 957, 963, 1082, 1087
BshNI GGYRCC 5 cut(s) 644, 920, 1061, 1277, 1379
BshTI ACCGGT 1 cut(s) 599
BshVI ATCGAT 1 cut(s) 1161
BsiHKAI GWGCWC 3 cut(s) 20, 133, 801
BsiSI CCGG 9 cut(s) 207, 243, 303, 600, 648, 891, 1083, 1224, 1377
BslFI GGGAC 1 cut(s) 908
BsmAI GTCTC 1 cut(s) 1188
BsmFI GGGAC 1 cut(s) 908
BsmI GAATGC 2 cut(s) 365, 715
BsnI GGCC 9 cut(s) 92, 386, 472, 621, 915, 957, 963, 1082, 1087
Bsp119I TTCGAA 2 cut(s) 332, 573
Bsp1286I GDGCHC 5 cut(s) 20, 133, 801, 1280, 1442
Bsp13I TCCGGA 1 cut(s) 1223
Bsp143I GATC 5 cut(s) 564, 726, 870, 1162, 1213
Bsp1720I GCTNAGC 1 cut(s) 195
Bsp19I CCATGG 1 cut(s) 964
BspACI CCGC 8 cut(s) 36, 89, 246, 294, 387, 925, 954, 1383
BspANI GGCC 9 cut(s) 92, 386, 472, 621, 915, 957, 963, 1082, 1087
BspCNI CTCAG 1 cut(s) 1260
BspDI ATCGAT 1 cut(s) 1161
BspEI TCCGGA 1 cut(s) 1223
BspFNI CGCG 1 cut(s) 89
BspPI GGATC 4 cut(s) 572, 734, 1208, 1221
BspT104I TTCGAA 2 cut(s) 332, 573
BspT107I GGYRCC 5 cut(s) 644, 920, 1061, 1277, 1379
BsrDI GCAATG 1 cut(s) 1359
BsrFI RCCGGY 4 cut(s) 206, 599, 647, 1376
BsrI ACTGG 1 cut(s) 361
BssAI RCCGGY 4 cut(s) 206, 599, 647, 1376
BssMI GATC 5 cut(s) 564, 726, 870, 1162, 1213
BssNI GRCGYC 3 cut(s) 177, 921, 1062
BssT1I CCWWGG 4 cut(s) 466, 486, 622, 964
Bst2UI CCWGG 3 cut(s) 813, 917, 960
Bst4CI ACNGT 4 cut(s) 329, 587, 644, 1027
BstACI GRCGYC 3 cut(s) 177, 921, 1062
BstBI TTCGAA 2 cut(s) 332, 573
BstC8I GCNNGC 8 cut(s) 20, 85, 208, 391, 649, 925, 1378, 1465
BstDEI CTNAG 5 cut(s) 70, 195, 1247, 1366, 1434
BstDSI CCRYGG 3 cut(s) 106, 964, 1011
BstF5I GGATG 3 cut(s) 101, 680, 731
BstFNI CGCG 1 cut(s) 89
BstH2I RGCGCY 3 cut(s) 924, 1065, 1320
BstHHI GCGC 4 cut(s) 89, 923, 1064, 1319
BstKTI GATC 5 cut(s) 567, 729, 873, 1165, 1216
BstMAI GTCTC 1 cut(s) 1188
BstMBI GATC 5 cut(s) 564, 726, 870, 1162, 1213
BstMWI GCNNNNNNNGC 9 cut(s) 89, 98, 191, 303, 657, 666, 960, 1382, 1460
BstNI CCWGG 3 cut(s) 813, 917, 960
BstNSI RCATGY 1 cut(s) 393
BstSCI CCNGG 6 cut(s) 241, 811, 890, 915, 958, 1082
BstSLI GKGCMC 4 cut(s) 133, 801, 1280, 1442
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 6 cut(s) 318, 638, 824, 1018, 1326, 1466
BstX2I RGATCY 2 cut(s) 564, 1213
BstYI RGATCY 2 cut(s) 564, 1213
Bsu15I ATCGAT 1 cut(s) 1161
Bsu36I CCTNAGG 1 cut(s) 1366
BsuRI GGCC 9 cut(s) 92, 386, 472, 621, 915, 957, 963, 1082, 1087
BsuTUI ATCGAT 1 cut(s) 1161
BtgI CCRYGG 3 cut(s) 106, 964, 1011
BtgZI GCGATG 2 cut(s) 324, 675
BtrI CACGTC 1 cut(s) 378
BtsCI GGATG 3 cut(s) 101, 680, 731
BtsIMutI CAGTG 3 cut(s) 147, 979, 1255
Cac8I GCNNGC 8 cut(s) 20, 85, 208, 391, 649, 925, 1378, 1465
CfoI GCGC 4 cut(s) 89, 923, 1064, 1319
Cfr10I RCCGGY 4 cut(s) 206, 599, 647, 1376
Cfr13I GGNCC 7 cut(s) 410, 452, 470, 956, 1080, 1085, 1135
ClaI ATCGAT 1 cut(s) 1161
CseI GACGC 2 cut(s) 231, 269
Csp6I GTAC 3 cut(s) 403, 748, 994
CspAI ACCGGT 1 cut(s) 599
CviAII CATG 8 cut(s) 28, 390, 474, 636, 787, 965, 1139, 1311
CviQI GTAC 3 cut(s) 403, 748, 994
DdeI CTNAG 5 cut(s) 70, 195, 1247, 1366, 1434
DinI GGCGCC 2 cut(s) 922, 1063
DpnI GATC 5 cut(s) 566, 728, 872, 1164, 1215
DpnII GATC 5 cut(s) 564, 726, 870, 1162, 1213
EaeI YGGCCR 5 cut(s) 90, 384, 619, 913, 961
Ecl136II GAGCTC 1 cut(s) 18
Eco130I CCWWGG 4 cut(s) 466, 486, 622, 964
Eco24I GRGCYC 1 cut(s) 20
Eco47I GGWCC 3 cut(s) 410, 452, 1135
Eco47III AGCGCT 1 cut(s) 1318
Eco53kI GAGCTC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 1246
Eco81I CCTNAGG 1 cut(s) 1366
EcoICRI GAGCTC 1 cut(s) 18
EcoRII CCWGG 3 cut(s) 811, 915, 958
EcoT14I CCWWGG 4 cut(s) 466, 486, 622, 964
EcoT38I GRGCYC 1 cut(s) 20
EgeI GGCGCC 2 cut(s) 922, 1063
EheI GGCGCC 2 cut(s) 922, 1063
ErhI CCWWGG 4 cut(s) 466, 486, 622, 964
FaeI CATG 8 cut(s) 31, 393, 477, 639, 790, 968, 1142, 1314
FaqI GGGAC 1 cut(s) 908
FatI CATG 8 cut(s) 27, 389, 473, 635, 786, 964, 1138, 1310
FauI CCCGC 1 cut(s) 932
FbaI TGATCA 1 cut(s) 870
FokI GGATG 3 cut(s) 88, 667, 718
FriOI GRGCYC 1 cut(s) 20
GlaI GCGC 4 cut(s) 88, 922, 1063, 1318
GsuI CTGGAG 1 cut(s) 757
HaeII RGCGCY 3 cut(s) 924, 1065, 1320
HaeIII GGCC 9 cut(s) 92, 386, 472, 621, 915, 957, 963, 1082, 1087
HapII CCGG 9 cut(s) 207, 243, 303, 600, 648, 891, 1083, 1224, 1377
HgaI GACGC 2 cut(s) 231, 269
HhaI GCGC 4 cut(s) 89, 923, 1064, 1319
Hin1I GRCGYC 3 cut(s) 177, 921, 1062
Hin1II CATG 8 cut(s) 31, 393, 477, 639, 790, 968, 1142, 1314
Hin6I GCGC 4 cut(s) 87, 921, 1062, 1317
HinP1I GCGC 4 cut(s) 87, 921, 1062, 1317
HinfI GANTC 6 cut(s) 212, 299, 334, 770, 1068, 1447
HpaII CCGG 9 cut(s) 207, 243, 303, 600, 648, 891, 1083, 1224, 1377
HphI GGTGA 4 cut(s) 589, 614, 757, 1015
Hpy166II GTNNAC 3 cut(s) 110, 131, 799
Hpy188I TCNGA 5 cut(s) 141, 856, 887, 1265, 1408
Hpy188III TCNNGA 4 cut(s) 338, 557, 697, 1224
Hpy8I GTNNAC 3 cut(s) 110, 131, 799
Hpy99I CGWCG 6 cut(s) 141, 179, 287, 914, 1288, 1337
HpyAV CCTTC 3 cut(s) 196, 694, 1204
HpyCH4III ACNGT 4 cut(s) 329, 587, 644, 1027
HpyCH4IV ACGT 7 cut(s) 177, 377, 780, 861, 945, 1293, 1398
HpyF10VI GCNNNNNNNGC 9 cut(s) 89, 98, 191, 303, 657, 666, 960, 1382, 1460
HpyF3I CTNAG 5 cut(s) 70, 195, 1247, 1366, 1434
HpySE526I ACGT 7 cut(s) 177, 377, 780, 861, 945, 1293, 1398
Hsp92I GRCGYC 3 cut(s) 177, 921, 1062
Hsp92II CATG 8 cut(s) 31, 393, 477, 639, 790, 968, 1142, 1314
HspAI GCGC 4 cut(s) 87, 921, 1062, 1317
KasI GGCGCC 2 cut(s) 920, 1061
Kpn2I TCCGGA 1 cut(s) 1223
KroI GCCGGC 3 cut(s) 206, 647, 1376
KroNI GCCGGC 3 cut(s) 208, 649, 1378
Ksp22I TGATCA 1 cut(s) 870
Kzo9I GATC 5 cut(s) 564, 726, 870, 1162, 1213
LmnI GCTCC 5 cut(s) 141, 268, 488, 490, 1373
Lsp1109I GCAGC 6 cut(s) 318, 638, 824, 1018, 1326, 1466
LweI GCATC 5 cut(s) 110, 331, 888, 978, 1412
MaeII ACGT 7 cut(s) 177, 377, 780, 861, 945, 1293, 1398
MalI GATC 5 cut(s) 566, 728, 872, 1164, 1215
MboI GATC 5 cut(s) 564, 726, 870, 1162, 1213
MboII GAAGA 1 cut(s) 50
MfeI CAATTG 2 cut(s) 1033, 1152
MflI RGATCY 2 cut(s) 564, 1213
MhlI GDGCHC 5 cut(s) 20, 133, 801, 1280, 1442
MlsI TGGCCA 2 cut(s) 621, 963
MluCI AATT 7 cut(s) 507, 692, 850, 1033, 1110, 1152, 1343
MluNI TGGCCA 2 cut(s) 621, 963
Mly113I GGCGCC 2 cut(s) 921, 1062
MlyI GAGTC 2 cut(s) 293, 764
MmeI TCCRAC 4 cut(s) 119, 708, 879, 958
Mox20I TGGCCA 2 cut(s) 621, 963
MroI TCCGGA 1 cut(s) 1223
MroNI GCCGGC 3 cut(s) 206, 647, 1376
MscI TGGCCA 2 cut(s) 621, 963
MseI TTAA 3 cut(s) 372, 705, 1272
MslI CAYNNNNRTG 3 cut(s) 660, 1309, 1408
Msp20I TGGCCA 2 cut(s) 621, 963
MspI CCGG 9 cut(s) 207, 243, 303, 600, 648, 891, 1083, 1224, 1377
MspR9I CCNGG 6 cut(s) 243, 813, 892, 917, 960, 1084
MunI CAATTG 2 cut(s) 1033, 1152
Mva1269I GAATGC 2 cut(s) 365, 715
MvaI CCWGG 3 cut(s) 813, 917, 960
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 9 cut(s) 89, 98, 191, 303, 657, 666, 960, 1382, 1460
NaeI GCCGGC 3 cut(s) 208, 649, 1378
NarI GGCGCC 2 cut(s) 921, 1062
NciI CCSGG 3 cut(s) 243, 892, 1084
NcoI CCATGG 1 cut(s) 964
NdeII GATC 5 cut(s) 564, 726, 870, 1162, 1213
NgoMIV GCCGGC 3 cut(s) 206, 647, 1376
NlaIII CATG 8 cut(s) 31, 393, 477, 639, 790, 968, 1142, 1314
NmuCI GTSAC 5 cut(s) 178, 595, 1021, 1027, 1302
NspI RCATGY 1 cut(s) 393
NspV TTCGAA 2 cut(s) 332, 573
PaeI GCATGC 1 cut(s) 393
PcsI WCGNNNNNNNCGW 3 cut(s) 1008, 1023, 1125
PctI GAATGC 2 cut(s) 365, 715
PdiI GCCGGC 3 cut(s) 208, 649, 1378
PfeI GAWTC 4 cut(s) 212, 334, 1068, 1447
PflFI GACNNNGTC 1 cut(s) 860
PinAI ACCGGT 1 cut(s) 599
PleI GAGTC 2 cut(s) 293, 764
PluTI GGCGCC 2 cut(s) 924, 1065
PpsI GAGTC 2 cut(s) 293, 764
Psp124BI GAGCTC 1 cut(s) 20
Psp1406I AACGTT 3 cut(s) 780, 945, 1293
Psp6I CCWGG 3 cut(s) 811, 915, 958
PspGI CCWGG 3 cut(s) 811, 915, 958
PspPI GGNCC 7 cut(s) 410, 452, 470, 956, 1080, 1085, 1135
PsrI GAACNNNNNNTAC 2 cut(s) 731, 763
PsuI RGATCY 2 cut(s) 564, 1213
PsyI GACNNNGTC 1 cut(s) 860
RsaI GTAC 3 cut(s) 404, 749, 995
RsaNI GTAC 3 cut(s) 403, 748, 994
RseI CAYNNNNRTG 3 cut(s) 660, 1309, 1408
SacI GAGCTC 1 cut(s) 20
SaqAI TTAA 3 cut(s) 372, 705, 1272
Sau3AI GATC 5 cut(s) 564, 726, 870, 1162, 1213
Sau96I GGNCC 7 cut(s) 410, 452, 470, 956, 1080, 1085, 1135
ScaI AGTACT 1 cut(s) 749
SchI GAGTC 2 cut(s) 293, 764
ScrFI CCNGG 6 cut(s) 243, 813, 892, 917, 960, 1084
SduI GDGCHC 5 cut(s) 20, 133, 801, 1280, 1442
SfaNI GCATC 5 cut(s) 110, 331, 888, 978, 1412
SfoI GGCGCC 2 cut(s) 922, 1063
SfuI TTCGAA 2 cut(s) 332, 573
SgrAI CRCCGGYG 1 cut(s) 599
SinI GGWCC 3 cut(s) 410, 452, 1135
SmiMI CAYNNNNRTG 3 cut(s) 660, 1309, 1408
SphI GCATGC 1 cut(s) 393
Sse9I AATT 7 cut(s) 507, 692, 850, 1033, 1110, 1152, 1343
SsiI CCGC 8 cut(s) 36, 89, 246, 294, 387, 925, 954, 1383
SspDI GGCGCC 2 cut(s) 920, 1061
SspI AATATT 1 cut(s) 580
SstI GAGCTC 1 cut(s) 20
StyD4I CCNGG 6 cut(s) 241, 811, 890, 915, 958, 1082
StyI CCWWGG 4 cut(s) 466, 486, 622, 964
TaaI ACNGT 4 cut(s) 329, 587, 644, 1027
TaiI ACGT 7 cut(s) 180, 380, 783, 864, 948, 1296, 1401
TaqI TCGA 8 cut(s) 174, 332, 573, 720, 1046, 1119, 1161, 1356
TasI AATT 7 cut(s) 507, 692, 850, 1033, 1110, 1152, 1343
TatI WGTACW 3 cut(s) 402, 747, 993
TauI GCSGC 4 cut(s) 92, 297, 389, 957
TfiI GAWTC 4 cut(s) 212, 334, 1068, 1447
Tru1I TTAA 3 cut(s) 372, 705, 1272
Tru9I TTAA 3 cut(s) 372, 705, 1272
TscAI CASTG 3 cut(s) 154, 979, 1255
TseFI GTSAC 5 cut(s) 178, 595, 1021, 1027, 1302
TseI GCWGC 6 cut(s) 306, 651, 837, 1006, 1314, 1454
Tsp45I GTSAC 5 cut(s) 178, 595, 1021, 1027, 1302
TspDTI ATGAA 4 cut(s) 358, 743, 803, 1460
TspGWI ACGGA 1 cut(s) 898
TspRI CASTG 3 cut(s) 154, 979, 1255
Tth111I GACNNNGTC 1 cut(s) 860
VneI GTGCAC 2 cut(s) 129, 797
VpaK11BI GGWCC 3 cut(s) 410, 452, 1135
XapI RAATTY 2 cut(s) 507, 692
XceI RCATGY 1 cut(s) 393
ZraI GACGTC 1 cut(s) 178
ZrmI AGTACT 1 cut(s) 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.