Rmu_sc0006200.1_g000006

Forkhead associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006200.1
OG0005860
Physical Location & Seq
Reverse (-)
38718 .. 43514
4797 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2466 bp
atgtccgacgtcggcgaaagcgagcccgctccgctaaagcccaatgggccggtgcgctccgaggagtccatgtcccccatgcagttcaccacctccgccgccgccaaaatcgcctcccagcctctcccctcctacgacccctccgtctggggcgtcctcaccgccatctcctccaacgcccgcaaacgcccccagggcataaatatgctattgacttccattgagcatcaaattggacgatgcgtggccgataagcggttccagattgagtcgactgccattagtgcaaatcactgcaagatatataggaagaaggttgatgaagatgccaagtctgcatcaatcttcctcaaggacacaagcacgaatgggacgtatctcaactgggagaagctcacaaaagttggccctgaagttgaagtacgtcatggcgacattatctcgcttgctgcacctcctcagcatggtgttgcatttgcatttgtatttagagaagttgtctccaattccagtacagctggtgcttttgcaaagagaaaagcagatgagtttgctggtgagaacaagagactgaaaggtattggcattggggctcctgagggtccaatatctcttgatgattttcgaagtcttcaacggtccaacacggaattgaggaagcaattagaaagtcaagtcattacaattgataggttgcgcagtgacaatcgtttggctgttgagcatcatgaaaatgaaaaaagagaactgaaagaatcagttgcaaaaccttaccttgatcaactgaaagagttgcatcgtattgtggaggttaaacagaaggaggtggtagagatcaataagatatgtgcagaacaaagatatgctctcgaagaccttaatgaaaggcttacagcttctgtgcagtcatgcactgaagcaaatgaaataatgaatactcagaaagcttctctggctgagctcaaggcacagttggatgaagagcgagatcagagaagagaagagcgagaaaaggctgcagtagatctaaaagcagcagtacataaagctcaatcagatgctcaagaggaactaaaacaatattctgatgctgccacaagacgagagagagagcaacaagaagtaattaacaagcttcaggaatcagagagagagacgtgtttactaatagaaaacttgagaacaaaattggaagacactaggcaaaagttggtagtctctgaaaataaaaatcgccagctagacacccaagtttgcgaagagcagtcaacctctgatagtcgaaaaaaggtgatcatgcctcttaatcctaacttggatattattcccgattataaggagacacaactaagggcattttattccacaactgaggagatttctgtactgtttgctaaacagcaggaacagttgaaatcgatgcagaggacactggaagatgaggaaaattatgataacacatcagttgattttgacctcaatgttattggggatacaactggaactgaaggcagagatgataaagtaatcaggtaccgtagaaacaacactgctagggcagggtcagcaacaacaccgcagaggtccaatggaaatcaaattggaacatctagtgaagaagtcagtgttactgagaagcatgactgtgatatcagaagcgaacaaggtgaacataccgaagaggcagaattcaccagtgcaaaccatggtgtcaagggtggctttggttctgacattgatggtattggtacaggacctgttatggagggagatggcattggcaccgagcatgttcctgaaactgaaggcattgacactgagcatgttcctgaaacggagagccctggaatgaatggtgacgaaaatattgatttgaacaagattgccactatggaagaggatacaatgcaaattgatgaggaaggccatgtgcaaggaaatgatgagaaagttgcaatgatttttcagcagcgtcactctcaatcaaacacaatcaggacagcagaccttatagcttctgaaactattggtagctgggcttgtagcacagccccttctgtccatggagaaaatggatctccaagaagtagagacaacgaggaaggtgctgctgcaccacacgatccgattgacagggtggctgagagccaaagtactccatcttctgagactgctgccacaagacggaatcgtgagcgtcaagcactgagtgaaatgattgggatagttgctcccgacttaaaagaacagttcggtaatgtggacgatagttatgataatgagagaagaaaacaggcttctacatctgactcagataccgagagttgtacgaacagtgaagataataacaaagttgaagctgccgaaggtgattcaatttcagactcagagaccgagggtagtgatcgggttgataacgcaatggacgaagatggtgtggatacagaagaagattccgttggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FHA

Protein Analysis

821

Amino Acids

91.06

Weight (kDa)

4.74

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 78 - 149 8.8e-11 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1335
AasI GACNNNNNNGTC 1 cut(s) 143
AatII GACGTC 1 cut(s) 12
Acc16I TGCGCA 1 cut(s) 698
Acc65I GGTACC 1 cut(s) 1533
AccB1I GGYRCC 2 cut(s) 1533, 1781
AccBSI CCGCTC 1 cut(s) 29
AccI GTMKAC 1 cut(s) 272
AciI CCGC 9 cut(s) 27, 32, 96, 99, 102, 162, 181, 256, 1577
AclWI GGATC 2 cut(s) 2083, 2117
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 1 cut(s) 1688
AcuI CTGAAG 5 cut(s) 432, 936, 1121, 1527, 1824
AcyI GRCGYC 2 cut(s) 9, 153
AdeI CACNNNGTG 1 cut(s) 2210
AfaI GTAC 8 cut(s) 423, 514, 1041, 1386, 1535, 1750, 2155, 2329
AfiI CCNNNNNNNGG 4 cut(s) 147, 255, 464, 2184
AflIII ACRYGT 1 cut(s) 1157
AgsI TTSAA 6 cut(s) 419, 635, 1414, 1876, 2357, 2376
AjiI CACGTC 1 cut(s) 1158
AjnI CCWGG 2 cut(s) 192, 1843
AjuI GAANNNNNNNTTGG 1 cut(s) 2442
Alw21I GWGCWC 1 cut(s) 963
Alw26I GTCTC 8 cut(s) 505, 562, 1148, 1222, 1334, 2085, 2162, 2384
AlwI GGATC 2 cut(s) 2083, 2117
AlwNI CAGNNNCTG 2 cut(s) 899, 1757
AoxI GGCC 4 cut(s) 47, 246, 406, 1924
ApeKI GCWGC 9 cut(s) 449, 1016, 1034, 1091, 1969, 2108, 2111, 2174, 2360
ApoI RAATTY 1 cut(s) 1688
Asp718I GGTACC 1 cut(s) 1533
AspLEI GCGC 2 cut(s) 57, 699
AspS9I GGNCC 6 cut(s) 47, 407, 602, 639, 1584, 1754
AsuHPI GGTGA 8 cut(s) 79, 151, 569, 1303, 1679, 1684, 1868, 2381
AsuII TTCGAA 1 cut(s) 625
AvaII GGWCC 4 cut(s) 602, 639, 1584, 1754
AxyI CCTNAGG 1 cut(s) 597
BanI GGYRCC 2 cut(s) 1533, 1781
BanII GRGCYC 4 cut(s) 27, 595, 963, 1844
BarI GAAGNNNNNNTAC 4 cut(s) 405, 437, 2146, 2178
BbsI GAAGAC 3 cut(s) 623, 879, 1200
Bbv12I GWGCWC 1 cut(s) 963
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 9 cut(s) 436, 1003, 1046, 1078, 1981, 2095, 2098, 2161, 2347
BccI CCATC 5 cut(s) 173, 1733, 1766, 2167, 2426
BcgI CGANNNNNNTGC 2 cut(s) 2087, 2121
BciT130I CCWGG 2 cut(s) 194, 1845
BciVI GTATCC 3 cut(s) 1486, 1894, 2434
BclI TGATCA 2 cut(s) 778, 1293
BcoDI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1334, 2085, 2162, 2384
BfaI CTAG 4 cut(s) 1200, 1241, 1554, 1611
BfmI CTRYAG 1 cut(s) 1017
BfuI GTATCC 3 cut(s) 1486, 1894, 2434
BglI GCCNNNNNGGC 2 cut(s) 46, 195
BglII AGATCT 1 cut(s) 1024
BlpI GCTNAGC 1 cut(s) 957
BmcAI AGTACT 1 cut(s) 2155
Bme1390I CCNGG 2 cut(s) 194, 1845
Bme18I GGWCC 4 cut(s) 602, 639, 1584, 1754
BmgBI CACGTC 1 cut(s) 1158
BmgT120I GGNCC 6 cut(s) 47, 407, 602, 639, 1584, 1754
BmiI GGNNCC 5 cut(s) 260, 594, 603, 1535, 1783
BmrFI CCNGG 2 cut(s) 194, 1845
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 9 cut(s) 230, 235, 316, 347, 733, 805, 1048, 1078, 1410
BmuI ACTGGG 1 cut(s) 394
BpiI GAAGAC 3 cut(s) 623, 879, 1200
Bpu10I CCTNAGC 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 625
BpuEI CTTGAG 4 cut(s) 335, 947, 1047, 1198
Bsa29I ATCGAT 1 cut(s) 1418
BsaHI GRCGYC 2 cut(s) 9, 153
BsaI GGTCTC 1 cut(s) 2384
BsaJI CCNNGG 7 cut(s) 60, 192, 193, 1705, 1843, 2062, 2394
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 125, 155
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 255, 464, 2184
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 5 cut(s) 389, 510, 1437, 1504, 1695
Bse21I CCTNAGG 1 cut(s) 597
Bse3DI GCAATG 2 cut(s) 1962, 2427
BseBI CCWGG 2 cut(s) 194, 1845
BseCI ATCGAT 1 cut(s) 1418
BseDI CCNNGG 7 cut(s) 60, 192, 193, 1705, 1843, 2062, 2394
BseGI GGATG 1 cut(s) 982
BseLI CCNNNNNNNGG 4 cut(s) 147, 255, 464, 2184
BseMI GCAATG 2 cut(s) 1962, 2427
BseNI ACTGG 5 cut(s) 389, 510, 1437, 1504, 1695
BseRI GAGGAG 4 cut(s) 77, 160, 447, 1388
BseXI GCAGC 9 cut(s) 436, 1003, 1046, 1078, 1981, 2095, 2098, 2161, 2347
BseYI CCCAGC 2 cut(s) 117, 2034
BsgI GTGCAG 4 cut(s) 435, 870, 923, 2097
BshFI GGCC 4 cut(s) 49, 248, 408, 1926
BshNI GGYRCC 2 cut(s) 1533, 1781
BshVI ATCGAT 1 cut(s) 1418
BsiHKAI GWGCWC 1 cut(s) 963
BsiSI CCGG 1 cut(s) 50
BslFI GGGAC 2 cut(s) 58, 385
BslI CCNNNNNNNGG 4 cut(s) 147, 255, 464, 2184
BsmAI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1334, 2085, 2162, 2384
BsmBI CGTCTC 1 cut(s) 1148
BsmFI GGGAC 2 cut(s) 58, 385
BsnI GGCC 4 cut(s) 49, 248, 408, 1926
Bso31I GGTCTC 1 cut(s) 2384
Bsp119I TTCGAA 1 cut(s) 625
Bsp1286I GDGCHC 4 cut(s) 27, 595, 963, 1844
Bsp143I GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
Bsp1720I GCTNAGC 1 cut(s) 957
Bsp19I CCATGG 2 cut(s) 1705, 2062
BspACI CCGC 9 cut(s) 27, 32, 96, 99, 102, 162, 181, 256, 1577
BspANI GGCC 4 cut(s) 49, 248, 408, 1926
BspDI ATCGAT 1 cut(s) 1418
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 5 cut(s) 260, 594, 603, 1535, 1783
BspMAI CTGCAG 1 cut(s) 1021
BspPI GGATC 2 cut(s) 2083, 2117
BspQI GCTCTTC 3 cut(s) 975, 996, 1254
BspT104I TTCGAA 1 cut(s) 625
BspT107I GGYRCC 2 cut(s) 1533, 1781
BspTNI GGTCTC 1 cut(s) 2384
BsrBI CCGCTC 1 cut(s) 29
BsrDI GCAATG 2 cut(s) 1962, 2427
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 5 cut(s) 389, 510, 1437, 1504, 1695
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 7 cut(s) 60, 192, 193, 1705, 1843, 2062, 2394
BssMI GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
BssNI GRCGYC 2 cut(s) 9, 153
BssT1I CCWWGG 2 cut(s) 1705, 2062
Bst2UI CCWGG 2 cut(s) 194, 1845
Bst4CI ACNGT 8 cut(s) 639, 972, 1389, 1410, 1538, 1646, 2250, 2336
Bst6I CTCTTC 6 cut(s) 975, 991, 996, 1254, 1674, 1890
BstACI GRCGYC 2 cut(s) 9, 153
BstBI TTCGAA 1 cut(s) 625
BstC8I GCNNGC 5 cut(s) 23, 27, 181, 447, 1238
BstDSI CCRYGG 2 cut(s) 1705, 2062
BstF5I GGATG 1 cut(s) 982
BstHHI GCGC 2 cut(s) 57, 699
BstKTI GATC 8 cut(s) 781, 837, 991, 1027, 1296, 2078, 2125, 2407
BstMAI GTCTC 8 cut(s) 505, 562, 1148, 1222, 1334, 2085, 2162, 2384
BstMBI GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
BstMWI GCNNNNNNNGC 8 cut(s) 31, 46, 110, 195, 284, 335, 953, 1565
BstNI CCWGG 2 cut(s) 194, 1845
BstNSI RCATGY 2 cut(s) 1793, 1826
BstSCI CCNGG 2 cut(s) 192, 1843
BstSFI CTRYAG 1 cut(s) 1017
BstV1I GCAGC 9 cut(s) 436, 1003, 1046, 1078, 1981, 2095, 2098, 2161, 2347
BstV2I GAAGAC 3 cut(s) 623, 879, 1200
BstX2I RGATCY 2 cut(s) 1024, 2075
BstYI RGATCY 2 cut(s) 1024, 2075
Bsu15I ATCGAT 1 cut(s) 1418
Bsu36I CCTNAGG 1 cut(s) 597
BsuI GTATCC 3 cut(s) 1486, 1894, 2434
BsuRI GGCC 4 cut(s) 49, 248, 408, 1926
BsuTUI ATCGAT 1 cut(s) 1418
BtgI CCRYGG 2 cut(s) 1705, 2062
BtrI CACGTC 1 cut(s) 1158
BtsCI GGATG 1 cut(s) 982
BtsI GCAGTG 3 cut(s) 292, 706, 1548
Cac8I GCNNGC 5 cut(s) 23, 27, 181, 447, 1238
CaiI CAGNNNCTG 2 cut(s) 899, 1757
CciI TCATGA 1 cut(s) 727
CfoI GCGC 2 cut(s) 57, 699
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 6 cut(s) 47, 407, 602, 639, 1584, 1754
ClaI ATCGAT 1 cut(s) 1418
CseI GACGC 3 cut(s) 142, 1961, 2186
Csp6I GTAC 8 cut(s) 422, 513, 1040, 1385, 1534, 1749, 2154, 2328
CviQI GTAC 8 cut(s) 422, 513, 1040, 1385, 1534, 1749, 2154, 2328
DpnI GATC 8 cut(s) 780, 836, 990, 1026, 1295, 2077, 2124, 2406
DpnII GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
DraIII CACNNNGTG 1 cut(s) 2210
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 6 cut(s) 975, 991, 996, 1254, 1674, 1890
EarI CTCTTC 6 cut(s) 975, 991, 996, 1254, 1674, 1890
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 961
Eco130I CCWWGG 2 cut(s) 1705, 2062
Eco24I GRGCYC 4 cut(s) 27, 595, 963, 1844
Eco31I GGTCTC 1 cut(s) 2384
Eco32I GATATC 1 cut(s) 1651
Eco47I GGWCC 4 cut(s) 602, 639, 1584, 1754
Eco53kI GAGCTC 1 cut(s) 961
Eco57I CTGAAG 5 cut(s) 432, 936, 1121, 1527, 1824
Eco81I CCTNAGG 1 cut(s) 597
EcoICRI GAGCTC 1 cut(s) 961
EcoO109I RGGNCCY 1 cut(s) 1754
EcoRI GAATTC 1 cut(s) 1688
EcoRII CCWGG 2 cut(s) 192, 1843
EcoRV GATATC 1 cut(s) 1651
EcoT14I CCWWGG 2 cut(s) 1705, 2062
EcoT38I GRGCYC 4 cut(s) 27, 595, 963, 1844
ErhI CCWWGG 2 cut(s) 1705, 2062
Esp3I CGTCTC 1 cut(s) 1148
FalI AAGNNNNNCTT 2 cut(s) 1706, 1738
FaqI GGGAC 2 cut(s) 58, 385
FauI CCCGC 2 cut(s) 34, 188
FbaI TGATCA 2 cut(s) 778, 1293
FblI GTMKAC 1 cut(s) 272
FokI GGATG 1 cut(s) 989
FriOI GRGCYC 4 cut(s) 27, 595, 963, 1844
FspBI CTAG 4 cut(s) 1200, 1241, 1554, 1611
FspI TGCGCA 1 cut(s) 698
GlaI GCGC 2 cut(s) 56, 698
GsaI CCCAGC 2 cut(s) 121, 2038
HaeIII GGCC 4 cut(s) 49, 248, 408, 1926
HapII CCGG 1 cut(s) 50
HgaI GACGC 3 cut(s) 142, 1961, 2186
HhaI GCGC 2 cut(s) 57, 699
Hin1I GRCGYC 2 cut(s) 9, 153
Hin6I GCGC 2 cut(s) 55, 697
HinP1I GCGC 2 cut(s) 55, 697
HincII GTYRAC 2 cut(s) 273, 1269
HindII GTYRAC 2 cut(s) 273, 1269
HindIII AAGCTT 2 cut(s) 945, 1133
HinfI GANTC 9 cut(s) 65, 269, 755, 1142, 2188, 2309, 2372, 2384, 2453
HpaII CCGG 1 cut(s) 50
HphI GGTGA 8 cut(s) 79, 151, 569, 1303, 1679, 1684, 1868, 2381
Hpy166II GTNNAC 6 cut(s) 87, 273, 1163, 1269, 1670, 2263
Hpy8I GTNNAC 6 cut(s) 87, 273, 1163, 1269, 1670, 2263
Hpy99I CGWCG 2 cut(s) 11, 14
HpyAV CCTTC 8 cut(s) 307, 814, 1502, 1799, 1916, 2064, 2096, 2360
HpyCH4III ACNGT 8 cut(s) 639, 972, 1389, 1410, 1538, 1646, 2250, 2336
HpyCH4IV ACGT 4 cut(s) 9, 374, 424, 1157
HpyF10VI GCNNNNNNNGC 8 cut(s) 31, 46, 110, 195, 284, 335, 953, 1565
HpySE526I ACGT 4 cut(s) 9, 374, 424, 1157
Hsp92I GRCGYC 2 cut(s) 9, 153
HspAI GCGC 2 cut(s) 55, 697
KpnI GGTACC 1 cut(s) 1537
Ksp22I TGATCA 2 cut(s) 778, 1293
Kzo9I GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
LguI GCTCTTC 3 cut(s) 975, 996, 1254
LmnI GCTCC 4 cut(s) 34, 62, 598, 2236
Lsp1109I GCAGC 9 cut(s) 436, 1003, 1046, 1078, 1981, 2095, 2098, 2161, 2347
LweI GCATC 9 cut(s) 230, 235, 316, 347, 733, 805, 1048, 1078, 1410
MaeI CTAG 4 cut(s) 1200, 1241, 1554, 1611
MaeII ACGT 4 cut(s) 9, 374, 424, 1157
MaeIII GTNAC 4 cut(s) 701, 1627, 1856, 1973
MalI GATC 8 cut(s) 780, 836, 990, 1026, 1295, 2077, 2124, 2406
MbiI CCGCTC 1 cut(s) 29
MboI GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
MfeI CAATTG 1 cut(s) 684
MflI RGATCY 2 cut(s) 1024, 2075
MhlI GDGCHC 4 cut(s) 27, 595, 963, 1844
MlyI GAGTC 4 cut(s) 74, 278, 2303, 2378
MmeI TCCRAC 5 cut(s) 30, 198, 666, 954, 2440
MseI TTAA 5 cut(s) 813, 879, 1128, 1305, 2240
MslI CAYNNNNRTG 3 cut(s) 203, 732, 1644
MspA1I CMGCKG 1 cut(s) 518
MspI CCGG 1 cut(s) 50
MspR9I CCNGG 2 cut(s) 194, 1845
MunI CAATTG 1 cut(s) 684
MvaI CCWGG 2 cut(s) 194, 1845
MwoI GCNNNNNNNGC 8 cut(s) 31, 46, 110, 195, 284, 335, 953, 1565
NcoI CCATGG 2 cut(s) 1705, 2062
NdeII GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
NlaIV GGNNCC 5 cut(s) 260, 594, 603, 1535, 1783
NmuCI GTSAC 3 cut(s) 701, 1856, 1973
NsbI TGCGCA 1 cut(s) 698
NspI RCATGY 2 cut(s) 1793, 1826
NspV TTCGAA 1 cut(s) 625
PagI TCATGA 1 cut(s) 727
PasI CCCWGGG 1 cut(s) 193
PciSI GCTCTTC 3 cut(s) 975, 996, 1254
PcsI WCGNNNNNNNCGW 4 cut(s) 18, 141, 371, 2424
PfeI GAWTC 5 cut(s) 755, 1142, 2188, 2372, 2453
PleI GAGTC 4 cut(s) 73, 277, 2303, 2378
PpsI GAGTC 4 cut(s) 73, 277, 2303, 2378
PpuMI RGGWCCY 1 cut(s) 1754
PsiI TTATAA 1 cut(s) 1335
Psp124BI GAGCTC 1 cut(s) 963
Psp5II RGGWCCY 1 cut(s) 1754
Psp6I CCWGG 2 cut(s) 192, 1843
PspFI CCCAGC 2 cut(s) 117, 2034
PspGI CCWGG 2 cut(s) 192, 1843
PspN4I GGNNCC 5 cut(s) 260, 594, 603, 1535, 1783
PspPI GGNCC 6 cut(s) 47, 407, 602, 639, 1584, 1754
PspPPI RGGWCCY 1 cut(s) 1754
PstI CTGCAG 1 cut(s) 1021
PstNI CAGNNNCTG 2 cut(s) 899, 1757
PsuI RGATCY 2 cut(s) 1024, 2075
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 8 cut(s) 423, 514, 1041, 1386, 1535, 1750, 2155, 2329
RsaNI GTAC 8 cut(s) 422, 513, 1040, 1385, 1534, 1749, 2154, 2328
RseI CAYNNNNRTG 3 cut(s) 203, 732, 1644
SacI GAGCTC 1 cut(s) 963
SalI GTCGAC 1 cut(s) 271
SapI GCTCTTC 3 cut(s) 975, 996, 1254
SaqAI TTAA 5 cut(s) 813, 879, 1128, 1305, 2240
Sau3AI GATC 8 cut(s) 778, 834, 988, 1024, 1293, 2075, 2122, 2404
Sau96I GGNCC 6 cut(s) 47, 407, 602, 639, 1584, 1754
ScaI AGTACT 1 cut(s) 2155
SchI GAGTC 4 cut(s) 74, 278, 2303, 2378
ScrFI CCNGG 2 cut(s) 194, 1845
SduI GDGCHC 4 cut(s) 27, 595, 963, 1844
SfaNI GCATC 9 cut(s) 230, 235, 316, 347, 733, 805, 1048, 1078, 1410
SfcI CTRYAG 1 cut(s) 1017
SfuI TTCGAA 1 cut(s) 625
SinI GGWCC 4 cut(s) 602, 639, 1584, 1754
SmiMI CAYNNNNRTG 3 cut(s) 203, 732, 1644
SmlI CTYRAG 4 cut(s) 350, 962, 1062, 1177
SmoI CTYRAG 4 cut(s) 350, 962, 1062, 1177
SsiI CCGC 9 cut(s) 27, 32, 96, 99, 102, 162, 181, 256, 1577
SspI AATATT 2 cut(s) 1082, 1867
SspMI CTAG 4 cut(s) 1200, 1241, 1554, 1611
SstI GAGCTC 1 cut(s) 963
StyD4I CCNGG 2 cut(s) 192, 1843
StyI CCWWGG 2 cut(s) 1705, 2062
TaaI ACNGT 8 cut(s) 639, 972, 1389, 1410, 1538, 1646, 2250, 2336
TaiI ACGT 4 cut(s) 12, 377, 427, 1160
TaqI TCGA 5 cut(s) 272, 625, 870, 1282, 1418
TaqII GACCGA 1 cut(s) 2408
TatI WGTACW 4 cut(s) 512, 1039, 1384, 2153
TauI GCSGC 2 cut(s) 101, 104
TfiI GAWTC 5 cut(s) 755, 1142, 2188, 2372, 2453
Tru1I TTAA 5 cut(s) 813, 879, 1128, 1305, 2240
Tru9I TTAA 5 cut(s) 813, 879, 1128, 1305, 2240
TseFI GTSAC 3 cut(s) 701, 1856, 1973
TseI GCWGC 9 cut(s) 449, 1016, 1034, 1091, 1969, 2108, 2111, 2174, 2360
Tsp45I GTSAC 3 cut(s) 701, 1856, 1973
TspDTI ATGAA 8 cut(s) 336, 744, 750, 897, 939, 947, 993, 1865
TspGWI ACGGA 5 cut(s) 133, 662, 1850, 2200, 2446
VpaK11BI GGWCC 4 cut(s) 602, 639, 1584, 1754
XapI RAATTY 1 cut(s) 1688
XceI RCATGY 2 cut(s) 1793, 1826
XcmI CCANNNNNNNNNTGG 1 cut(s) 2069
XmiI GTMKAC 1 cut(s) 272
XspI CTAG 4 cut(s) 1200, 1241, 1554, 1611
ZraI GACGTC 1 cut(s) 10
ZrmI AGTACT 1 cut(s) 2155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.