Rmu_sc0006366.1_g000003
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006366.1
Physical Location & Seq
Reverse (-)
3199 .. 3934
736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006366.1_g000003.1.cds

Sequence Viewer

Length: 462 bp
atgttgaagcggttatcagctgaaatgaagcggtttacaagttctgatacctcggttcttaagctgtatgagaagaaggttcatgagttagaacatgagaagaaagcccttcagagagagattgaagagttgagacaaaatctttcaaatatcttatctacttctggggatggagctcaaaagttaaaggaggattatctacacaagttgaaccttcttcaaggacaggtttcagagctgaaaaagaaacaggatgctcaagcccaattgttgagacaaaaacaaaaaagcgatgaggctgcaaggatactacaggatgaaattcagagaataaagactcaaaaggtgctatttgttgttgaaatgcatatggtcatggagaatgatgattgtgtttgtttattattaatacaaggttatttcataggttcaattgcaacacaagatcaaacaggagtctga

Protein Analysis

153

Amino Acids

17.66

Weight (kDa)

7.76

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 10, 31
AcsI RAATTY 1 cut(s) 321
AcuI CTGAAG 1 cut(s) 95
AflII CTTAAG 1 cut(s) 59
AgsI TTSAA 7 cut(s) 7, 125, 147, 211, 221, 362, 432
AluBI AGCT 4 cut(s) 20, 64, 176, 238
AluI AGCT 4 cut(s) 20, 64, 176, 238
Alw21I GWGCWC 1 cut(s) 178
Alw26I GTCTC 2 cut(s) 127, 268
ApeKI GCWGC 1 cut(s) 299
ApoI RAATTY 1 cut(s) 321
AseI ATTAAT 1 cut(s) 407
BaeI ACNNNNGTAYC 2 cut(s) 39, 72
BanII GRGCYC 1 cut(s) 178
Bbv12I GWGCWC 1 cut(s) 178
BbvI GCAGC 1 cut(s) 286
BccI CCATC 1 cut(s) 164
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BciVI GTATCC 1 cut(s) 300
BcoDI GTCTC 2 cut(s) 127, 268
BfmI CTRYAG 1 cut(s) 311
BfrI CTTAAG 1 cut(s) 59
BfuI GTATCC 1 cut(s) 300
BisI GCNGC 1 cut(s) 300
BlsI GCNGC 1 cut(s) 301
BmsI GCATC 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 243
BsaJI CCNNGG 1 cut(s) 51
BseDI CCNNGG 1 cut(s) 51
BseGI GGATG 3 cut(s) 175, 259, 322
BseXI GCAGC 1 cut(s) 286
BsiHKAI GWGCWC 1 cut(s) 178
BsmAI GTCTC 2 cut(s) 127, 268
Bsp1286I GDGCHC 1 cut(s) 178
Bsp143I GATC 1 cut(s) 445
BspACI CCGC 2 cut(s) 10, 31
BspHI TCATGA 1 cut(s) 82
BspTI CTTAAG 1 cut(s) 59
BssECI CCNNGG 1 cut(s) 51
BssMI GATC 1 cut(s) 445
Bst6I CTCTTC 1 cut(s) 120
BstAFI CTTAAG 1 cut(s) 59
BstF5I GGATG 3 cut(s) 175, 259, 322
BstKTI GATC 1 cut(s) 448
BstMAI GTCTC 2 cut(s) 127, 268
BstMBI GATC 1 cut(s) 445
BstSFI CTRYAG 1 cut(s) 311
BstV1I GCAGC 1 cut(s) 286
BsuI GTATCC 1 cut(s) 300
BtgZI GCGATG 1 cut(s) 306
BtsCI GGATG 3 cut(s) 175, 259, 322
CciI TCATGA 1 cut(s) 82
CviAII CATG 3 cut(s) 83, 95, 376
CviJI RGCY 7 cut(s) 20, 64, 107, 176, 238, 263, 299
CviKI_1 RGCY 7 cut(s) 20, 64, 107, 176, 238, 263, 299
DpnI GATC 1 cut(s) 447
DpnII GATC 1 cut(s) 445
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
Ecl136II GAGCTC 1 cut(s) 176
Eco24I GRGCYC 1 cut(s) 178
Eco53kI GAGCTC 1 cut(s) 176
Eco57I CTGAAG 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 176
EcoT22I ATGCAT 1 cut(s) 369
EcoT38I GRGCYC 1 cut(s) 178
FaeI CATG 3 cut(s) 86, 98, 379
FaiI YATR 7 cut(s) 69, 84, 96, 369, 371, 377, 425
FatI CATG 3 cut(s) 82, 94, 375
FauNDI CATATG 1 cut(s) 369
Fnu4HI GCNGC 1 cut(s) 300
FokI GGATG 3 cut(s) 182, 266, 329
FriOI GRGCYC 1 cut(s) 178
Fsp4HI GCNGC 1 cut(s) 300
GluI GCNGC 1 cut(s) 300
Hin1II CATG 3 cut(s) 86, 98, 379
HinfI GANTC 2 cut(s) 337, 456
Hpy166II GTNNAC 1 cut(s) 36
Hpy188I TCNGA 5 cut(s) 46, 114, 235, 327, 461
Hpy188III TCNNGA 1 cut(s) 83
Hpy8I GTNNAC 1 cut(s) 36
HpyAV CCTTC 3 cut(s) 70, 119, 224
HpyCH4V TGCA 3 cut(s) 302, 367, 437
Hsp92II CATG 3 cut(s) 86, 98, 379
Kzo9I GATC 1 cut(s) 445
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 5 cut(s) 150, 212, 236, 299, 438
Lsp1109I GCAGC 1 cut(s) 286
LweI GCATC 1 cut(s) 244
MalI GATC 1 cut(s) 447
MboI GATC 1 cut(s) 445
MboII GAAGA 4 cut(s) 85, 112, 137, 209
MfeI CAATTG 2 cut(s) 266, 432
MhlI GDGCHC 1 cut(s) 178
MluCI AATT 3 cut(s) 266, 321, 432
MlyI GAGTC 1 cut(s) 331
MnlI CCTC 3 cut(s) 61, 184, 289
Mph1103I ATGCAT 1 cut(s) 369
MseI TTAA 3 cut(s) 60, 185, 407
MspA1I CMGCKG 1 cut(s) 20
MspCI CTTAAG 1 cut(s) 59
MunI CAATTG 2 cut(s) 266, 432
NdeI CATATG 1 cut(s) 369
NdeII GATC 1 cut(s) 445
NlaIII CATG 3 cut(s) 86, 98, 379
NsiI ATGCAT 1 cut(s) 369
PagI TCATGA 1 cut(s) 82
PkrI GCNGC 1 cut(s) 301
PleI GAGTC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 331
PshBI ATTAAT 1 cut(s) 407
Psp124BI GAGCTC 1 cut(s) 178
PvuII CAGCTG 1 cut(s) 20
SacI GAGCTC 1 cut(s) 178
SaqAI TTAA 3 cut(s) 60, 185, 407
SatI GCNGC 1 cut(s) 300
Sau3AI GATC 1 cut(s) 445
SchI GAGTC 1 cut(s) 331
SduI GDGCHC 1 cut(s) 178
SfaNI GCATC 1 cut(s) 244
SfcI CTRYAG 1 cut(s) 311
SmlI CTYRAG 2 cut(s) 59, 258
SmoI CTYRAG 2 cut(s) 59, 258
Sse9I AATT 3 cut(s) 266, 321, 432
SsiI CCGC 2 cut(s) 10, 31
SstI GAGCTC 1 cut(s) 178
TasI AATT 3 cut(s) 266, 321, 432
Tru1I TTAA 3 cut(s) 60, 185, 407
Tru9I TTAA 3 cut(s) 60, 185, 407
TseI GCWGC 1 cut(s) 299
TspDTI ATGAA 4 cut(s) 41, 71, 333, 412
Vha464I CTTAAG 1 cut(s) 59
VspI ATTAAT 1 cut(s) 407
XapI RAATTY 1 cut(s) 321
Zsp2I ATGCAT 1 cut(s) 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.