Rh7AG452200
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
61843189 .. 61844301
1113 bp
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UTR
Exon/CDS
Intron
Rh7AG452200.1

Sequence Viewer

Length: 450 bp
ATGAAAATTGAAGCCTTCCGAAATGGTAAATCTTGGGATGAGATTGGATTGTCAGTTCAGGCTGAAATGAAGCGGTTTACAAGTTCTGATACCTCGGTTCTTAAGCTGTATGAGAAGAAGGTTCATGAGTTAGAACATGAGAAGAAAGCCCTTCAGAGAGAGATTGAAGAGTTGAGACAAAATCTTTCAAATATCTCATCTACTTCTGGGGATGGAGCTCAAAAGTTAAAGGAGGATTATCTACACAAGTTAAACCTTCTTGAAGGACAGGTTTCTGAGCTGAAAAAGAAACAGGATGCTCAAGCCCAATTGTTGAGACAAAAACAAAAAAGCGATGAGGCTGCAAGGAGACTACAGGATGAAATTCAGAGAATAAAGACTCAAAAGGTTCAATTGCAACACAAGATCAAACAGGAGTCTGAGCAGTTTAGATTATGGAAAGCATCATGA

Protein Analysis

149

Amino Acids

17.49

Weight (kDa)

9.44

Isoelectric Point (pI)

53.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP65_ASE1 PF03999 11 - 70 2.6e-06 Microtubule associated protein (MAP65/ASE1 family)
KIF21A_4th PF25764 20 - 148 3.4e-40 KIF21A-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 73
AcsI RAATTY 1 cut(s) 363
AcuI CTGAAG 1 cut(s) 137
AflII CTTAAG 1 cut(s) 101
AgsI TTSAA 5 cut(s) 11, 167, 189, 263, 392
AloI GAACNNNNNNTCC 2 cut(s) 39, 71
AluBI AGCT 3 cut(s) 106, 218, 280
AluI AGCT 3 cut(s) 106, 218, 280
Alw21I GWGCWC 1 cut(s) 220
Alw26I GTCTC 3 cut(s) 169, 310, 343
ApeKI GCWGC 1 cut(s) 341
ApoI RAATTY 1 cut(s) 363
BaeI ACNNNNGTAYC 2 cut(s) 81, 114
BanII GRGCYC 1 cut(s) 220
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 1 cut(s) 328
BccI CCATC 1 cut(s) 206
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BcoDI GTCTC 3 cut(s) 169, 310, 343
BfmI CTRYAG 1 cut(s) 353
BfrI CTTAAG 1 cut(s) 101
BisI GCNGC 1 cut(s) 342
BlsI GCNGC 1 cut(s) 343
BmsI GCATC 1 cut(s) 286
BpuEI CTTGAG 1 cut(s) 285
BsaJI CCNNGG 1 cut(s) 93
BseDI CCNNGG 1 cut(s) 93
BseGI GGATG 4 cut(s) 43, 217, 301, 364
BseMII CTCAG 2 cut(s) 267, 411
BseXI GCAGC 1 cut(s) 328
BsiHKAI GWGCWC 1 cut(s) 220
BsmAI GTCTC 3 cut(s) 169, 310, 343
Bsp1286I GDGCHC 1 cut(s) 220
Bsp143I GATC 1 cut(s) 405
BspACI CCGC 1 cut(s) 73
BspCNI CTCAG 2 cut(s) 268, 412
BspHI TCATGA 2 cut(s) 124, 446
BspTI CTTAAG 1 cut(s) 101
BssECI CCNNGG 1 cut(s) 93
BssMI GATC 1 cut(s) 405
Bst6I CTCTTC 1 cut(s) 162
BstAFI CTTAAG 1 cut(s) 101
BstDEI CTNAG 2 cut(s) 276, 420
BstF5I GGATG 4 cut(s) 43, 217, 301, 364
BstKTI GATC 1 cut(s) 408
BstMAI GTCTC 3 cut(s) 169, 310, 343
BstMBI GATC 1 cut(s) 405
BstSFI CTRYAG 1 cut(s) 353
BstV1I GCAGC 1 cut(s) 328
BtgZI GCGATG 1 cut(s) 348
BtsCI GGATG 4 cut(s) 43, 217, 301, 364
CciI TCATGA 2 cut(s) 124, 446
CviAII CATG 3 cut(s) 125, 137, 447
CviJI RGCY 8 cut(s) 14, 62, 106, 149, 218, 280, 305, 341
CviKI_1 RGCY 8 cut(s) 14, 62, 106, 149, 218, 280, 305, 341
DdeI CTNAG 2 cut(s) 276, 420
DpnI GATC 1 cut(s) 407
DpnII GATC 1 cut(s) 405
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Ecl136II GAGCTC 1 cut(s) 218
Eco24I GRGCYC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 218
Eco57I CTGAAG 1 cut(s) 137
EcoICRI GAGCTC 1 cut(s) 218
EcoT38I GRGCYC 1 cut(s) 220
FaeI CATG 3 cut(s) 128, 140, 450
FaiI YATR 5 cut(s) 111, 126, 138, 436, 448
FatI CATG 3 cut(s) 124, 136, 446
Fnu4HI GCNGC 1 cut(s) 342
FokI GGATG 4 cut(s) 50, 224, 308, 371
FriOI GRGCYC 1 cut(s) 220
Fsp4HI GCNGC 1 cut(s) 342
GluI GCNGC 1 cut(s) 342
Hin1II CATG 3 cut(s) 128, 140, 450
HinfI GANTC 2 cut(s) 379, 416
Hpy166II GTNNAC 1 cut(s) 78
Hpy188I TCNGA 6 cut(s) 20, 88, 156, 277, 369, 421
Hpy188III TCNNGA 3 cut(s) 125, 260, 447
Hpy8I GTNNAC 1 cut(s) 78
HpyAV CCTTC 5 cut(s) 25, 112, 161, 257, 266
HpyCH4V TGCA 2 cut(s) 344, 397
HpyF3I CTNAG 2 cut(s) 276, 420
Hsp92II CATG 3 cut(s) 128, 140, 450
Kzo9I GATC 1 cut(s) 405
LmnI GCTCC 1 cut(s) 215
LpnPI CCDG 6 cut(s) 44, 192, 254, 278, 341, 398
Lsp1109I GCAGC 1 cut(s) 328
LweI GCATC 1 cut(s) 286
MalI GATC 1 cut(s) 407
MboI GATC 1 cut(s) 405
MboII GAAGA 3 cut(s) 127, 154, 179
MfeI CAATTG 2 cut(s) 308, 392
MhlI GDGCHC 1 cut(s) 220
MluCI AATT 4 cut(s) 6, 308, 363, 392
MlyI GAGTC 2 cut(s) 373, 425
MnlI CCTC 3 cut(s) 103, 226, 331
MseI TTAA 3 cut(s) 102, 227, 251
MspCI CTTAAG 1 cut(s) 101
MunI CAATTG 2 cut(s) 308, 392
NdeII GATC 1 cut(s) 405
NlaIII CATG 3 cut(s) 128, 140, 450
PagI TCATGA 2 cut(s) 124, 446
PkrI GCNGC 1 cut(s) 343
PleI GAGTC 2 cut(s) 373, 424
PpsI GAGTC 2 cut(s) 373, 424
Psp124BI GAGCTC 1 cut(s) 220
SacI GAGCTC 1 cut(s) 220
SaqAI TTAA 3 cut(s) 102, 227, 251
SatI GCNGC 1 cut(s) 342
Sau3AI GATC 1 cut(s) 405
SchI GAGTC 2 cut(s) 373, 425
SduI GDGCHC 1 cut(s) 220
SetI ASST 8 cut(s) 95, 108, 123, 220, 258, 273, 282, 390
SfaNI GCATC 1 cut(s) 286
SfcI CTRYAG 1 cut(s) 353
SmlI CTYRAG 2 cut(s) 101, 300
SmoI CTYRAG 2 cut(s) 101, 300
Sse9I AATT 4 cut(s) 6, 308, 363, 392
SsiI CCGC 1 cut(s) 73
SstI GAGCTC 1 cut(s) 220
TasI AATT 4 cut(s) 6, 308, 363, 392
Tru1I TTAA 3 cut(s) 102, 227, 251
Tru9I TTAA 3 cut(s) 102, 227, 251
TseI GCWGC 1 cut(s) 341
TspDTI ATGAA 4 cut(s) 17, 83, 113, 375
Vha464I CTTAAG 1 cut(s) 101
XapI RAATTY 1 cut(s) 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.