Rw7G037550
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0019091
Physical Location & Seq
Reverse (-)
56965080 .. 56965909
830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G037550.1

Sequence Viewer

Length: 426 bp
ATGTCCCTAATGAATCAAAAAGAGCAAGAACATTCTTCTCTTCAAGAAAAACTGGATCGGGAGCTGAAAGAATTGGACAAGGCTCTCGAGCAAAAGGAGGCTGAAATGAAGCGGTTTACAAGTTCTGATACCTCGGTTCTTAAGCTGTATGAGAAGAAGGTTCATGAGTTAGAACATGAGAAGAAAGCCCTTCAGAGAGAGATTGAAGAGTTGAGACAAAATCTTTCAAATATCTCATTTACTTCTGGGGATGGAGCTCAAAAGTTAAAGGAGGATTATCTACACAAGTTGAACCTTCCTGAAGGACAGGTTTCTGAGCTGAAAAAGAAACAGGATGCTCAAGCCCAATTGTTGAGACAAAAACAAAAATGCGATAAGGCTGCAAGGAGACTACAGGATGAAATTCAGAGACCTAAAAGAGTTTAA

Protein Analysis

141

Amino Acids

16.64

Weight (kDa)

8.87

Isoelectric Point (pI)

57.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIF21A_4th PF25764 5 - 140 5.8e-34 KIF21A-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 112
AclWI GGATC 1 cut(s) 63
AcsI RAATTY 1 cut(s) 402
AcuI CTGAAG 2 cut(s) 176, 321
AflII CTTAAG 1 cut(s) 140
AgsI TTSAA 4 cut(s) 44, 206, 228, 292
AluBI AGCT 4 cut(s) 64, 145, 257, 319
AluI AGCT 4 cut(s) 64, 145, 257, 319
Alw21I GWGCWC 1 cut(s) 259
Alw26I GTCTC 4 cut(s) 208, 349, 382, 403
AlwI GGATC 1 cut(s) 63
Ama87I CYCGRG 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 380
ApoI RAATTY 1 cut(s) 402
AvaI CYCGRG 1 cut(s) 86
BaeI ACNNNNGTAYC 2 cut(s) 120, 153
BanII GRGCYC 1 cut(s) 259
Bbv12I GWGCWC 1 cut(s) 259
BbvI GCAGC 1 cut(s) 367
BccI CCATC 1 cut(s) 245
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BcoDI GTCTC 4 cut(s) 208, 349, 382, 403
BfmI CTRYAG 1 cut(s) 392
BfrI CTTAAG 1 cut(s) 140
BisI GCNGC 1 cut(s) 381
BlsI GCNGC 1 cut(s) 382
BmeT110I CYCGRG 1 cut(s) 86
BmsI GCATC 1 cut(s) 325
BpuEI CTTGAG 1 cut(s) 324
BsaI GGTCTC 1 cut(s) 403
BsaJI CCNNGG 1 cut(s) 132
Bse1I ACTGG 1 cut(s) 57
BseDI CCNNGG 1 cut(s) 132
BseGI GGATG 3 cut(s) 256, 340, 403
BseMII CTCAG 1 cut(s) 306
BseNI ACTGG 1 cut(s) 57
BseXI GCAGC 1 cut(s) 367
BsiHKAI GWGCWC 1 cut(s) 259
BsiHKCI CYCGRG 1 cut(s) 86
BsmAI GTCTC 4 cut(s) 208, 349, 382, 403
Bso31I GGTCTC 1 cut(s) 403
BsoBI CYCGRG 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 259
Bsp143I GATC 1 cut(s) 55
BspACI CCGC 1 cut(s) 112
BspCNI CTCAG 1 cut(s) 307
BspHI TCATGA 1 cut(s) 163
BspPI GGATC 1 cut(s) 63
BspTI CTTAAG 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 403
BsrI ACTGG 1 cut(s) 57
BssECI CCNNGG 1 cut(s) 132
BssMI GATC 1 cut(s) 55
Bst6I CTCTTC 2 cut(s) 45, 201
BstAFI CTTAAG 1 cut(s) 140
BstDEI CTNAG 1 cut(s) 315
BstF5I GGATG 3 cut(s) 256, 340, 403
BstKTI GATC 1 cut(s) 58
BstMAI GTCTC 4 cut(s) 208, 349, 382, 403
BstMBI GATC 1 cut(s) 55
BstSFI CTRYAG 1 cut(s) 392
BstV1I GCAGC 1 cut(s) 367
BtsCI GGATG 3 cut(s) 256, 340, 403
CciI TCATGA 1 cut(s) 163
CviAII CATG 2 cut(s) 164, 176
CviJI RGCY 9 cut(s) 64, 83, 101, 145, 188, 257, 319, 344, 380
CviKI_1 RGCY 9 cut(s) 64, 83, 101, 145, 188, 257, 319, 344, 380
DdeI CTNAG 1 cut(s) 315
DpnI GATC 1 cut(s) 57
DpnII GATC 1 cut(s) 55
Eam1104I CTCTTC 2 cut(s) 45, 201
EarI CTCTTC 2 cut(s) 45, 201
Ecl136II GAGCTC 1 cut(s) 257
Eco24I GRGCYC 1 cut(s) 259
Eco31I GGTCTC 1 cut(s) 403
Eco53kI GAGCTC 1 cut(s) 257
Eco57I CTGAAG 2 cut(s) 176, 321
Eco88I CYCGRG 1 cut(s) 86
EcoICRI GAGCTC 1 cut(s) 257
EcoT38I GRGCYC 1 cut(s) 259
FaeI CATG 2 cut(s) 167, 179
FaiI YATR 3 cut(s) 150, 165, 177
FatI CATG 2 cut(s) 163, 175
Fnu4HI GCNGC 1 cut(s) 381
FokI GGATG 3 cut(s) 263, 347, 410
FriOI GRGCYC 1 cut(s) 259
Fsp4HI GCNGC 1 cut(s) 381
GluI GCNGC 1 cut(s) 381
Hin1II CATG 2 cut(s) 167, 179
HinfI GANTC 1 cut(s) 13
Hpy166II GTNNAC 1 cut(s) 117
Hpy188I TCNGA 4 cut(s) 127, 195, 316, 408
Hpy188III TCNNGA 5 cut(s) 44, 59, 86, 164, 299
Hpy8I GTNNAC 1 cut(s) 117
HpyAV CCTTC 4 cut(s) 151, 200, 296, 305
HpyCH4V TGCA 1 cut(s) 383
HpyF3I CTNAG 1 cut(s) 315
Hsp92II CATG 2 cut(s) 167, 179
Kzo9I GATC 1 cut(s) 55
LmnI GCTCC 2 cut(s) 61, 254
LpnPI CCDG 6 cut(s) 38, 231, 293, 312, 317, 380
Lsp1109I GCAGC 1 cut(s) 367
LweI GCATC 1 cut(s) 325
MalI GATC 1 cut(s) 57
MboI GATC 1 cut(s) 55
MboII GAAGA 5 cut(s) 27, 32, 166, 193, 218
MfeI CAATTG 1 cut(s) 347
MhlI GDGCHC 1 cut(s) 259
MluCI AATT 3 cut(s) 71, 347, 402
MnlI CCTC 3 cut(s) 91, 142, 265
MseI TTAA 3 cut(s) 141, 266, 424
MspCI CTTAAG 1 cut(s) 140
MunI CAATTG 1 cut(s) 347
NdeII GATC 1 cut(s) 55
NlaIII CATG 2 cut(s) 167, 179
PaeR7I CTCGAG 1 cut(s) 86
PagI TCATGA 1 cut(s) 163
PfeI GAWTC 1 cut(s) 13
PkrI GCNGC 1 cut(s) 382
Psp124BI GAGCTC 1 cut(s) 259
SacI GAGCTC 1 cut(s) 259
SaqAI TTAA 3 cut(s) 141, 266, 424
SatI GCNGC 1 cut(s) 381
Sau3AI GATC 1 cut(s) 55
SduI GDGCHC 1 cut(s) 259
SetI ASST 9 cut(s) 66, 134, 147, 162, 259, 297, 312, 321, 415
SfaNI GCATC 1 cut(s) 325
SfcI CTRYAG 1 cut(s) 392
Sfr274I CTCGAG 1 cut(s) 86
SlaI CTCGAG 1 cut(s) 86
SmlI CTYRAG 3 cut(s) 86, 140, 339
SmoI CTYRAG 3 cut(s) 86, 140, 339
Sse9I AATT 3 cut(s) 71, 347, 402
SsiI CCGC 1 cut(s) 112
SstI GAGCTC 1 cut(s) 259
TaqI TCGA 1 cut(s) 87
TasI AATT 3 cut(s) 71, 347, 402
TfiI GAWTC 1 cut(s) 13
Tru1I TTAA 3 cut(s) 141, 266, 424
Tru9I TTAA 3 cut(s) 141, 266, 424
TseI GCWGC 1 cut(s) 380
TspDTI ATGAA 4 cut(s) 26, 122, 152, 414
Vha464I CTTAAG 1 cut(s) 140
XapI RAATTY 1 cut(s) 402
XhoI CTCGAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.