Rmu_sc0006702.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006702.1
OG0018223
Physical Location & Seq
Reverse (-)
1 .. 2329
2329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006702.1_g000001.1.cds

Sequence Viewer

Length: 2154 bp
atgaaaggttggtctatgacggcacctgagttccctaccattggcctgattagatctcgggatgaatgggaagccgattctccacatccggaaccgcgagatgagaatgacatggatattgtactggcggatgcagtggtgaaagacatgggtgcgccggaaaagaagaaaagaagggtggaggggcgacggagtagtctggggacggaggaggatggtggacttacggaagtacctgttatggaatgtgctaatttgggggagactggtaattcttgtgcagtgattgcgcaatctttgttggtgcagtcaatggatggaggaaatcccatgattggggatctgaattcaatgcgaacgcagtcagtgatagaggagatcctccctagtaataagcgggattgtacagatcctgatttgaagggattaagcgggaaagctagtggaaaggcgttgattgggatggatggtgtgagtcactctaattcaaccacgtcgaagtctgggcctgggcctaaaaaaaacagttcagtgaggaccgcggttgatagtggaactgaagcccatatgaagaaacctaggggggccagaaacaggccgctccaccggtcgaagattaactttgagttctggacgtactctcgaacgttcctccgtgatgggtccggattcgacccatcacgagtcatgaatgttttatcatggaactgccaagggcttgggaacccttggacagttcgaggactccagggacttgtgtcccaaattcatcccgagttaatttttttgtcggaaactaaatgtactgtggcagagatggtcgatattcgagtaaaattgggttggcgtgatgctttctcagttccttgtaaagtaataaagaagaagaaaggtaagaggattgggcggtctgggggtctgtgtctcttatggaaggaagatttggcagtttctcttcgtagttattcggataatcatatcgatgtggttgttggtgaagcctccagtcagaagcaatggaggtttacgggcatctacggctgtccaagagtggaagacaggcatagaacatggtcactcattaaaactcttgggatccagagctctttgccttgggtgattgggggagattttaatgaaatcatttgcaacagggaaaaggagggtggtccccagagaagtgttagacaaatggaaggatttcgagatattgtggaggtcttctccttcaaggatattggtttctctggcccgagtttcacgtggagaggaaaacggggtggggagatcataaagaccaggttggataggttcctggttactccgggttggtatgacatgtttccgctctcccaggttactcacctattacctaacaagtccgatcaccttcccattttcttggcagtgcgagagtgcagaccacagagaaagaagaagaggaagaaacggtttaaatttgaagaattgtggcttcgtgatgatgagtgcagcaaggtagtggaacaaggatggagtagtgtgggtggggttgatcctttttctactatttgtcataagataaaagaaacacgaaggggtcttatggaatggagtgaggcccgttatggctccattaagaaggatattaaggacattcaagagaagcttgtggtgttctatgattccgctatttcttctccaccggattctgcaagaattgccttagaagatcggttaaatgagttactgttgaaagagcaagatttttggaaacaaagggcgaaggtattttggctttctgatggtgatttgaacacacggttctttcatcaacgtgcaagtaaccgacgaaagaaaaatagaattaaagggttattagatgagaatggcacttggtgtacaactgatggtgagatagaaaatattgtactaaattattatcgtacactcttcacttcgtcccaaccggcaggaatggatgatgttgtgtcggtgctgccgtgttgtattaatgatgagatgaacaatactttggctggggatatcacattcgatgaagtttacatggcgctcaaacagatgcatccaggcaaggcacctggccctgatggatttgcaccatgcttttaccaacatttctggcaccttgttggtaatgatgtcactatggcg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

718

Amino Acids

81.0

Weight (kDa)

8.81

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018223)

Species Orthologous Gene IDs
rosa_laevigata RLG00000009410 RLG00000020622 RLG00000020623
rosa_multiflora Rmu_sc0006702.1_g000001
rosa_rugosa Rorug05G0215500
rosa_samantha Rh1AG254000 Rh1AG290000 Rh2CG265800 Rh5AG310600 Rh5BG130400 Rh6AG224100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 195
Acc16I TGCGCA 1 cut(s) 291
AccB1I GGYRCC 3 cut(s) 22, 2077, 2124
AccBSI CCGCTC 2 cut(s) 601, 1348
AccII CGCG 2 cut(s) 97, 542
AccIII TCCGGA 2 cut(s) 88, 665
AclI AACGTT 1 cut(s) 647
AclWI GGATC 6 cut(s) 348, 373, 404, 1090, 1103, 1529
AcsI RAATTY 3 cut(s) 346, 765, 1457
AcuI CTGAAG 1 cut(s) 579
AcvI CACGTG 1 cut(s) 1263
AdeI CACNNNGTG 1 cut(s) 1878
AfaI GTAC 8 cut(s) 123, 234, 406, 638, 805, 1882, 1911, 1927
AfiI CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
AflIII ACRYGT 1 cut(s) 1338
AgeI ACCGGT 1 cut(s) 606
AgsI TTSAA 8 cut(s) 351, 421, 489, 1231, 1463, 1640, 1735, 1795
AjiI CACGTC 1 cut(s) 495
AjnI CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
AjuI GAANNNNNNNTTGG 4 cut(s) 926, 958, 1997, 2029
AluBI AGCT 3 cut(s) 440, 1104, 1648
AluI AGCT 3 cut(s) 440, 1104, 1648
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 2 cut(s) 257, 929
AlwI GGATC 6 cut(s) 348, 373, 404, 1090, 1103, 1529
AlwNI CAGNNNCTG 1 cut(s) 413
Ama87I CYCGRG 3 cut(s) 57, 773, 1252
Aor13HI TCCGGA 2 cut(s) 88, 665
AoxI GGCC 8 cut(s) 43, 506, 512, 585, 596, 1249, 1599, 2083
ApeKI GCWGC 2 cut(s) 1491, 1978
ApoI RAATTY 3 cut(s) 346, 765, 1457
AseI ATTAAT 1 cut(s) 1992
AsiGI ACCGGT 1 cut(s) 606
Asp700I GAANNNNTTC 1 cut(s) 1200
AspA2I CCTAGG 1 cut(s) 578
AspLEI GCGC 3 cut(s) 157, 292, 2053
AspS9I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
AsuC2I CCSGG 1 cut(s) 1326
AsuHPI GGTGA 7 cut(s) 151, 1007, 1129, 1355, 1379, 1799, 1904
AvaI CYCGRG 3 cut(s) 57, 773, 1252
AvaII GGWCC 3 cut(s) 537, 663, 1169
AvrII CCTAGG 1 cut(s) 578
BaeI ACNNNNGTAYC 2 cut(s) 216, 249
BamHI GGATCC 1 cut(s) 1095
BanI GGYRCC 3 cut(s) 22, 2077, 2124
BanII GRGCYC 1 cut(s) 1106
BauI CACGAG 1 cut(s) 681
BbrPI CACGTG 1 cut(s) 1263
BbsI GAAGAC 2 cut(s) 1062, 1213
Bbv12I GWGCWC 1 cut(s) 1106
BbvI GCAGC 2 cut(s) 1503, 1965
BceAI ACGGC 3 cut(s) 36, 1054, 1966
BciT130I CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
BcnI CCSGG 1 cut(s) 1326
BcoDI GTCTC 2 cut(s) 257, 929
BfaI CTAG 3 cut(s) 387, 441, 579
BfoI RGCGCY 1 cut(s) 2054
BglII AGATCT 1 cut(s) 53
BisI GCNGC 3 cut(s) 599, 1492, 1979
BlnI CCTAGG 1 cut(s) 578
BlsI GCNGC 3 cut(s) 600, 1493, 1980
Bme1390I CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
Bme18I GGWCC 3 cut(s) 537, 663, 1169
BmeT110I CYCGRG 3 cut(s) 57, 773, 1252
BmgBI CACGTC 1 cut(s) 495
BmgT120I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
BmrFI CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
BmsI GCATC 5 cut(s) 121, 841, 1041, 2052, 2074
BoxI GACNNNNGTC 1 cut(s) 757
BpiI GAAGAC 2 cut(s) 1062, 1213
BplI GAGNNNNNCTC 2 cut(s) 1208, 1240
BpmI CTGGAG 2 cut(s) 731, 988
BpuMI CCSGG 1 cut(s) 1326
Bsa29I ATCGAT 1 cut(s) 981
BsaAI YACGTR 1 cut(s) 1263
BsaJI CCNNGG 8 cut(s) 509, 540, 578, 712, 728, 748, 1112, 1353
BsaWI WCCGGW 4 cut(s) 88, 606, 665, 1684
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
Bse118I RCCGGY 2 cut(s) 606, 1948
Bse1I ACTGG 3 cut(s) 129, 271, 1005
Bse3DI GCAATG 1 cut(s) 1022
BseAI TCCGGA 2 cut(s) 88, 665
BseBI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
BseCI ATCGAT 1 cut(s) 981
BseDI CCNNGG 8 cut(s) 509, 540, 578, 712, 728, 748, 1112, 1353
BseLI CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
BseMI GCAATG 1 cut(s) 1022
BseMII CTCAG 2 cut(s) 18, 873
BseNI ACTGG 3 cut(s) 129, 271, 1005
BseRI GAGGAG 2 cut(s) 224, 389
BseXI GCAGC 2 cut(s) 1503, 1965
BseYI CCCAGC 1 cut(s) 2018
BsgI GTGCAG 4 cut(s) 300, 326, 1438, 1510
Bsh1236I CGCG 2 cut(s) 97, 542
Bsh1285I CGRYCG 1 cut(s) 611
BshFI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BshNI GGYRCC 3 cut(s) 22, 2077, 2124
BshTI ACCGGT 1 cut(s) 606
BshVI ATCGAT 1 cut(s) 981
BsiEI CGRYCG 1 cut(s) 611
BsiHKAI GWGCWC 1 cut(s) 1106
BsiHKCI CYCGRG 3 cut(s) 57, 773, 1252
BsiSI CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
BslFI GGGAC 5 cut(s) 217, 745, 765, 1155, 1927
BslI CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
BsmAI GTCTC 2 cut(s) 257, 929
BsmFI GGGAC 5 cut(s) 217, 745, 765, 1155, 1927
BsnI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BsoBI CYCGRG 3 cut(s) 57, 773, 1252
Bsp1286I GDGCHC 1 cut(s) 1106
Bsp13I TCCGGA 2 cut(s) 88, 665
Bsp1407I TGTACA 2 cut(s) 404, 1880
Bsp143I GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
BspANI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BspCNI CTCAG 2 cut(s) 19, 872
BspDI ATCGAT 1 cut(s) 981
BspEI TCCGGA 2 cut(s) 88, 665
BspFNI CGCG 2 cut(s) 97, 542
BspHI TCATGA 1 cut(s) 687
BspPI GGATC 6 cut(s) 348, 373, 404, 1090, 1103, 1529
BspT107I GGYRCC 3 cut(s) 22, 2077, 2124
BsrBI CCGCTC 2 cut(s) 601, 1348
BsrDI GCAATG 1 cut(s) 1022
BsrFI RCCGGY 2 cut(s) 606, 1948
BsrGI TGTACA 2 cut(s) 404, 1880
BsrI ACTGG 3 cut(s) 129, 271, 1005
BssAI RCCGGY 2 cut(s) 606, 1948
BssECI CCNNGG 8 cut(s) 509, 540, 578, 712, 728, 748, 1112, 1353
BssMI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
BssSI CACGAG 1 cut(s) 681
BssT1I CCWWGG 4 cut(s) 578, 712, 728, 1112
Bst2BI CACGAG 1 cut(s) 681
Bst2UI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
Bst4CI ACNGT 6 cut(s) 527, 736, 808, 1452, 1731, 1803
Bst6I CTCTTC 3 cut(s) 960, 1433, 1937
BstAPI GCANNNNNTGC 2 cut(s) 287, 1700
BstAUI TGTACA 2 cut(s) 404, 1880
BstBAI YACGTR 1 cut(s) 1263
BstDEI CTNAG 3 cut(s) 27, 859, 1705
BstDSI CCRYGG 1 cut(s) 540
BstFNI CGCG 2 cut(s) 97, 542
BstH2I RGCGCY 1 cut(s) 2054
BstHHI GCGC 3 cut(s) 157, 292, 2053
BstKTI GATC 9 cut(s) 56, 343, 381, 412, 1098, 1290, 1387, 1537, 1714
BstMAI GTCTC 2 cut(s) 257, 929
BstMBI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
BstMCI CGRYCG 1 cut(s) 611
BstMWI GCNNNNNNNGC 3 cut(s) 287, 1038, 1700
BstNI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
BstNSI RCATGY 1 cut(s) 1342
BstPAI GACNNNNGTC 1 cut(s) 757
BstSCI CCNGG 8 cut(s) 508, 747, 1298, 1314, 1324, 1353, 2068, 2080
BstUI CGCG 2 cut(s) 97, 542
BstV1I GCAGC 2 cut(s) 1503, 1965
BstV2I GAAGAC 2 cut(s) 1062, 1213
BstX2I RGATCY 5 cut(s) 53, 340, 378, 409, 1095
BstXI CCANNNNNNTGG 2 cut(s) 719, 1402
BstYI RGATCY 5 cut(s) 53, 340, 378, 409, 1095
Bsu15I ATCGAT 1 cut(s) 981
BsuRI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BsuTUI ATCGAT 1 cut(s) 981
BtgI CCRYGG 1 cut(s) 540
BtrI CACGTC 1 cut(s) 495
BtsI GCAGTG 3 cut(s) 141, 288, 1413
BtsIMutI CAGTG 5 cut(s) 141, 288, 372, 537, 1413
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 1 cut(s) 687
CfoI GCGC 3 cut(s) 157, 292, 2053
Cfr10I RCCGGY 2 cut(s) 606, 1948
Cfr13I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
Cfr42I CCGCGG 1 cut(s) 543
ClaI ATCGAT 1 cut(s) 981
CsiI ACCWGGT 1 cut(s) 1298
Csp6I GTAC 8 cut(s) 122, 233, 405, 637, 804, 1881, 1910, 1926
CspAI ACCGGT 1 cut(s) 606
CviAII CATG 9 cut(s) 112, 148, 331, 688, 702, 1071, 1339, 2047, 2103
CviQI GTAC 8 cut(s) 122, 233, 405, 637, 804, 1881, 1910, 1926
DdeI CTNAG 3 cut(s) 27, 859, 1705
DpnI GATC 9 cut(s) 55, 342, 380, 411, 1097, 1289, 1386, 1536, 1713
DpnII GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
DraI TTTAAA 1 cut(s) 1456
DraIII CACNNNGTG 1 cut(s) 1878
DrdI GACNNNNNNGTC 1 cut(s) 195
DseDI GACNNNNNNGTC 1 cut(s) 195
Eam1104I CTCTTC 3 cut(s) 960, 1433, 1937
EarI CTCTTC 3 cut(s) 960, 1433, 1937
EciI GGCGGA 1 cut(s) 143
Ecl136II GAGCTC 1 cut(s) 1104
Eco130I CCWWGG 4 cut(s) 578, 712, 728, 1112
Eco24I GRGCYC 1 cut(s) 1106
Eco32I GATATC 1 cut(s) 2026
Eco47I GGWCC 3 cut(s) 537, 663, 1169
Eco53kI GAGCTC 1 cut(s) 1104
Eco57I CTGAAG 1 cut(s) 579
Eco72I CACGTG 1 cut(s) 1263
Eco88I CYCGRG 3 cut(s) 57, 773, 1252
EcoICRI GAGCTC 1 cut(s) 1104
EcoRI GAATTC 1 cut(s) 346
EcoRII CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
EcoRV GATATC 1 cut(s) 2026
EcoT14I CCWWGG 4 cut(s) 578, 712, 728, 1112
EcoT22I ATGCAT 1 cut(s) 2067
EcoT38I GRGCYC 1 cut(s) 1106
ErhI CCWWGG 4 cut(s) 578, 712, 728, 1112
FaeI CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
FalI AAGNNNNNCTT 4 cut(s) 605, 637, 1632, 1664
FaqI GGGAC 5 cut(s) 217, 745, 765, 1155, 1927
FatI CATG 9 cut(s) 111, 147, 330, 687, 701, 1070, 1338, 2046, 2102
FauI CCCGC 2 cut(s) 390, 425
FauNDI CATATG 1 cut(s) 567
Fnu4HI GCNGC 3 cut(s) 599, 1492, 1979
FriOI GRGCYC 1 cut(s) 1106
Fsp4HI GCNGC 3 cut(s) 599, 1492, 1979
FspBI CTAG 3 cut(s) 387, 441, 579
FspI TGCGCA 1 cut(s) 291
GlaI GCGC 3 cut(s) 156, 291, 2052
GluI GCNGC 3 cut(s) 599, 1492, 1979
GsaI CCCAGC 1 cut(s) 2022
GsuI CTGGAG 2 cut(s) 731, 988
HaeII RGCGCY 1 cut(s) 2054
HaeIII GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
HapII CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
HhaI GCGC 3 cut(s) 157, 292, 2053
Hin1II CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
Hin6I GCGC 3 cut(s) 155, 290, 2051
HinP1I GCGC 3 cut(s) 155, 290, 2051
HindIII AAGCTT 1 cut(s) 1646
HinfI GANTC 7 cut(s) 77, 475, 669, 684, 744, 1664, 1688
HpaII CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
HphI GGTGA 7 cut(s) 151, 1007, 1129, 1355, 1379, 1799, 1904
Hpy166II GTNNAC 5 cut(s) 221, 1026, 1881, 1928, 2044
Hpy188I TCNGA 6 cut(s) 345, 793, 970, 1011, 1384, 1783
Hpy8I GTNNAC 5 cut(s) 221, 1026, 1881, 1928, 2044
Hpy99I CGWCG 3 cut(s) 192, 499, 1833
HpyAV CCTTC 9 cut(s) 168, 415, 928, 1190, 1237, 1400, 1569, 1615, 1759
HpyCH4III ACNGT 6 cut(s) 527, 736, 808, 1452, 1731, 1803
HpyCH4IV ACGT 5 cut(s) 494, 635, 647, 1262, 1816
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 1038, 1700
HpyF3I CTNAG 3 cut(s) 27, 859, 1705
HpySE526I ACGT 5 cut(s) 494, 635, 647, 1262, 1816
Hsp92II CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
HspAI GCGC 3 cut(s) 155, 290, 2051
Kpn2I TCCGGA 2 cut(s) 88, 665
KspI CCGCGG 1 cut(s) 543
Kzo9I GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
LmnI GCTCC 2 cut(s) 606, 1616
Lsp1109I GCAGC 2 cut(s) 1503, 1965
LweI GCATC 5 cut(s) 121, 841, 1041, 2052, 2074
MabI ACCWGGT 1 cut(s) 1298
MaeI CTAG 3 cut(s) 387, 441, 579
MaeII ACGT 5 cut(s) 494, 635, 647, 1262, 1816
MaeIII GTNAC 7 cut(s) 476, 1074, 1318, 1357, 1725, 1823, 2143
MalI GATC 9 cut(s) 55, 342, 380, 411, 1097, 1289, 1386, 1536, 1713
MbiI CCGCTC 2 cut(s) 601, 1348
MboI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
MflI RGATCY 5 cut(s) 53, 340, 378, 409, 1095
MhlI GDGCHC 1 cut(s) 1106
MlyI GAGTC 3 cut(s) 484, 693, 738
MmeI TCCRAC 2 cut(s) 771, 1284
Mph1103I ATGCAT 1 cut(s) 2067
MroI TCCGGA 2 cut(s) 88, 665
MroXI GAANNNNTTC 1 cut(s) 1200
MslI CAYNNNNRTG 2 cut(s) 981, 1815
MspA1I CMGCKG 1 cut(s) 542
MspI CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
MspR9I CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
MvaI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
MvnI CGCG 2 cut(s) 97, 542
MwoI GCNNNNNNNGC 3 cut(s) 287, 1038, 1700
NciI CCSGG 1 cut(s) 1326
NdeI CATATG 1 cut(s) 567
NdeII GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
NlaIII CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
NmuCI GTSAC 3 cut(s) 476, 1074, 2143
NsbI TGCGCA 1 cut(s) 291
NsiI ATGCAT 1 cut(s) 2067
NspI RCATGY 1 cut(s) 1342
PagI TCATGA 1 cut(s) 687
PciI ACATGT 1 cut(s) 1338
PcsI WCGNNNNNNNCGW 1 cut(s) 1979
PdmI GAANNNNTTC 1 cut(s) 1200
PfeI GAWTC 4 cut(s) 77, 669, 1664, 1688
PinAI ACCGGT 1 cut(s) 606
PkrI GCNGC 3 cut(s) 600, 1493, 1980
PleI GAGTC 3 cut(s) 483, 692, 738
PmaCI CACGTG 1 cut(s) 1263
PmlI CACGTG 1 cut(s) 1263
PpsI GAGTC 3 cut(s) 483, 692, 738
Ppu21I YACGTR 1 cut(s) 1263
PscI ACATGT 1 cut(s) 1338
PshAI GACNNNNGTC 1 cut(s) 757
PshBI ATTAAT 1 cut(s) 1992
Psp124BI GAGCTC 1 cut(s) 1106
Psp1406I AACGTT 1 cut(s) 647
Psp6I CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
PspCI CACGTG 1 cut(s) 1263
PspFI CCCAGC 1 cut(s) 2018
PspGI CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
PspPI GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 5 cut(s) 53, 340, 378, 409, 1095
RsaI GTAC 8 cut(s) 123, 234, 406, 638, 805, 1882, 1911, 1927
RsaNI GTAC 8 cut(s) 122, 233, 405, 637, 804, 1881, 1910, 1926
RseI CAYNNNNRTG 2 cut(s) 981, 1815
SacI GAGCTC 1 cut(s) 1106
SacII CCGCGG 1 cut(s) 543
SatI GCNGC 3 cut(s) 599, 1492, 1979
Sau3AI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
Sau96I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
SchI GAGTC 3 cut(s) 484, 693, 738
ScrFI CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
SduI GDGCHC 1 cut(s) 1106
SexAI ACCWGGT 1 cut(s) 1298
SfaNI GCATC 5 cut(s) 121, 841, 1041, 2052, 2074
Sfr303I CCGCGG 1 cut(s) 543
SgrBI CCGCGG 1 cut(s) 543
SinI GGWCC 3 cut(s) 537, 663, 1169
SmiMI CAYNNNNRTG 2 cut(s) 981, 1815
SspI AATATT 1 cut(s) 1906
SspMI CTAG 3 cut(s) 387, 441, 579
SstI GAGCTC 1 cut(s) 1106
StyD4I CCNGG 8 cut(s) 508, 747, 1298, 1314, 1324, 1353, 2068, 2080
StyI CCWWGG 4 cut(s) 578, 712, 728, 1112
TaaI ACNGT 6 cut(s) 527, 736, 808, 1452, 1731, 1803
TaiI ACGT 5 cut(s) 497, 638, 650, 1265, 1819
TatI WGTACW 5 cut(s) 121, 404, 803, 1880, 1909
TauI GCSGC 1 cut(s) 601
TfiI GAWTC 4 cut(s) 77, 669, 1664, 1688
TscAI CASTG 5 cut(s) 141, 288, 372, 537, 1413
TseFI GTSAC 3 cut(s) 476, 1074, 2143
TseI GCWGC 2 cut(s) 1491, 1978
Tsp45I GTSAC 3 cut(s) 476, 1074, 2143
TspDTI ATGAA 9 cut(s) 17, 78, 584, 704, 758, 1152, 1799, 2018, 2052
TspGWI ACGGA 4 cut(s) 205, 221, 242, 644
TspRI CASTG 5 cut(s) 141, 288, 372, 537, 1413
VpaK11BI GGWCC 3 cut(s) 537, 663, 1169
VspI ATTAAT 1 cut(s) 1992
XapI RAATTY 3 cut(s) 346, 765, 1457
XceI RCATGY 1 cut(s) 1342
XmaJI CCTAGG 1 cut(s) 578
XmnI GAANNNNTTC 1 cut(s) 1200
XspI CTAG 3 cut(s) 387, 441, 579
Zsp2I ATGCAT 1 cut(s) 2067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.