Rmu_sc0006702.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006702.1
OG0018223
Physical Location & Seq
Reverse (-)
1 .. 2329
2329 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2154 bp
atgaaaggttggtctatgacggcacctgagttccctaccattggcctgattagatctcgggatgaatgggaagccgattctccacatccggaaccgcgagatgagaatgacatggatattgtactggcggatgcagtggtgaaagacatgggtgcgccggaaaagaagaaaagaagggtggaggggcgacggagtagtctggggacggaggaggatggtggacttacggaagtacctgttatggaatgtgctaatttgggggagactggtaattcttgtgcagtgattgcgcaatctttgttggtgcagtcaatggatggaggaaatcccatgattggggatctgaattcaatgcgaacgcagtcagtgatagaggagatcctccctagtaataagcgggattgtacagatcctgatttgaagggattaagcgggaaagctagtggaaaggcgttgattgggatggatggtgtgagtcactctaattcaaccacgtcgaagtctgggcctgggcctaaaaaaaacagttcagtgaggaccgcggttgatagtggaactgaagcccatatgaagaaacctaggggggccagaaacaggccgctccaccggtcgaagattaactttgagttctggacgtactctcgaacgttcctccgtgatgggtccggattcgacccatcacgagtcatgaatgttttatcatggaactgccaagggcttgggaacccttggacagttcgaggactccagggacttgtgtcccaaattcatcccgagttaatttttttgtcggaaactaaatgtactgtggcagagatggtcgatattcgagtaaaattgggttggcgtgatgctttctcagttccttgtaaagtaataaagaagaagaaaggtaagaggattgggcggtctgggggtctgtgtctcttatggaaggaagatttggcagtttctcttcgtagttattcggataatcatatcgatgtggttgttggtgaagcctccagtcagaagcaatggaggtttacgggcatctacggctgtccaagagtggaagacaggcatagaacatggtcactcattaaaactcttgggatccagagctctttgccttgggtgattgggggagattttaatgaaatcatttgcaacagggaaaaggagggtggtccccagagaagtgttagacaaatggaaggatttcgagatattgtggaggtcttctccttcaaggatattggtttctctggcccgagtttcacgtggagaggaaaacggggtggggagatcataaagaccaggttggataggttcctggttactccgggttggtatgacatgtttccgctctcccaggttactcacctattacctaacaagtccgatcaccttcccattttcttggcagtgcgagagtgcagaccacagagaaagaagaagaggaagaaacggtttaaatttgaagaattgtggcttcgtgatgatgagtgcagcaaggtagtggaacaaggatggagtagtgtgggtggggttgatcctttttctactatttgtcataagataaaagaaacacgaaggggtcttatggaatggagtgaggcccgttatggctccattaagaaggatattaaggacattcaagagaagcttgtggtgttctatgattccgctatttcttctccaccggattctgcaagaattgccttagaagatcggttaaatgagttactgttgaaagagcaagatttttggaaacaaagggcgaaggtattttggctttctgatggtgatttgaacacacggttctttcatcaacgtgcaagtaaccgacgaaagaaaaatagaattaaagggttattagatgagaatggcacttggtgtacaactgatggtgagatagaaaatattgtactaaattattatcgtacactcttcacttcgtcccaaccggcaggaatggatgatgttgtgtcggtgctgccgtgttgtattaatgatgagatgaacaatactttggctggggatatcacattcgatgaagtttacatggcgctcaaacagatgcatccaggcaaggcacctggccctgatggatttgcaccatgcttttaccaacatttctggcaccttgttggtaatgatgtcactatggcg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

718

Amino Acids

81.0

Weight (kDa)

8.81

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 233 - 446 5.2e-16 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018223)

Species Orthologous Gene IDs
rosa_laevigata RLG00000009410 RLG00000020622 RLG00000020623
rosa_multiflora Rmu_sc0006702.1_g000001
rosa_rugosa Rorug05G0215500
rosa_samantha Rh1AG254000 Rh1AG290000 Rh2CG265800 Rh5AG310600 Rh5BG130400 Rh6AG224100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 195
Acc16I TGCGCA 1 cut(s) 291
AccB1I GGYRCC 3 cut(s) 22, 2077, 2124
AccBSI CCGCTC 2 cut(s) 601, 1348
AccII CGCG 2 cut(s) 97, 542
AccIII TCCGGA 2 cut(s) 88, 665
AclI AACGTT 1 cut(s) 647
AclWI GGATC 6 cut(s) 348, 373, 404, 1090, 1103, 1529
AcsI RAATTY 3 cut(s) 346, 765, 1457
AcuI CTGAAG 1 cut(s) 579
AcvI CACGTG 1 cut(s) 1263
AdeI CACNNNGTG 1 cut(s) 1878
AfaI GTAC 8 cut(s) 123, 234, 406, 638, 805, 1882, 1911, 1927
AfiI CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
AflIII ACRYGT 1 cut(s) 1338
AgeI ACCGGT 1 cut(s) 606
AgsI TTSAA 8 cut(s) 351, 421, 489, 1231, 1463, 1640, 1735, 1795
AjiI CACGTC 1 cut(s) 495
AjnI CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
AjuI GAANNNNNNNTTGG 4 cut(s) 926, 958, 1997, 2029
AluBI AGCT 3 cut(s) 440, 1104, 1648
AluI AGCT 3 cut(s) 440, 1104, 1648
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 2 cut(s) 257, 929
AlwI GGATC 6 cut(s) 348, 373, 404, 1090, 1103, 1529
AlwNI CAGNNNCTG 1 cut(s) 413
Ama87I CYCGRG 3 cut(s) 57, 773, 1252
Aor13HI TCCGGA 2 cut(s) 88, 665
AoxI GGCC 8 cut(s) 43, 506, 512, 585, 596, 1249, 1599, 2083
ApeKI GCWGC 2 cut(s) 1491, 1978
ApoI RAATTY 3 cut(s) 346, 765, 1457
AseI ATTAAT 1 cut(s) 1992
AsiGI ACCGGT 1 cut(s) 606
Asp700I GAANNNNTTC 1 cut(s) 1200
AspA2I CCTAGG 1 cut(s) 578
AspLEI GCGC 3 cut(s) 157, 292, 2053
AspS9I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
AsuC2I CCSGG 1 cut(s) 1326
AsuHPI GGTGA 7 cut(s) 151, 1007, 1129, 1355, 1379, 1799, 1904
AvaI CYCGRG 3 cut(s) 57, 773, 1252
AvaII GGWCC 3 cut(s) 537, 663, 1169
AvrII CCTAGG 1 cut(s) 578
BaeI ACNNNNGTAYC 2 cut(s) 216, 249
BamHI GGATCC 1 cut(s) 1095
BanI GGYRCC 3 cut(s) 22, 2077, 2124
BanII GRGCYC 1 cut(s) 1106
BauI CACGAG 1 cut(s) 681
BbrPI CACGTG 1 cut(s) 1263
BbsI GAAGAC 2 cut(s) 1062, 1213
Bbv12I GWGCWC 1 cut(s) 1106
BbvI GCAGC 2 cut(s) 1503, 1965
BceAI ACGGC 3 cut(s) 36, 1054, 1966
BciT130I CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
BcnI CCSGG 1 cut(s) 1326
BcoDI GTCTC 2 cut(s) 257, 929
BfaI CTAG 3 cut(s) 387, 441, 579
BfoI RGCGCY 1 cut(s) 2054
BglII AGATCT 1 cut(s) 53
BisI GCNGC 3 cut(s) 599, 1492, 1979
BlnI CCTAGG 1 cut(s) 578
BlsI GCNGC 3 cut(s) 600, 1493, 1980
Bme1390I CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
Bme18I GGWCC 3 cut(s) 537, 663, 1169
BmeT110I CYCGRG 3 cut(s) 57, 773, 1252
BmgBI CACGTC 1 cut(s) 495
BmgT120I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
BmrFI CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
BmsI GCATC 5 cut(s) 121, 841, 1041, 2052, 2074
BoxI GACNNNNGTC 1 cut(s) 757
BpiI GAAGAC 2 cut(s) 1062, 1213
BplI GAGNNNNNCTC 2 cut(s) 1208, 1240
BpmI CTGGAG 2 cut(s) 731, 988
BpuMI CCSGG 1 cut(s) 1326
Bsa29I ATCGAT 1 cut(s) 981
BsaAI YACGTR 1 cut(s) 1263
BsaJI CCNNGG 8 cut(s) 509, 540, 578, 712, 728, 748, 1112, 1353
BsaWI WCCGGW 4 cut(s) 88, 606, 665, 1684
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
Bse118I RCCGGY 2 cut(s) 606, 1948
Bse1I ACTGG 3 cut(s) 129, 271, 1005
Bse3DI GCAATG 1 cut(s) 1022
BseAI TCCGGA 2 cut(s) 88, 665
BseBI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
BseCI ATCGAT 1 cut(s) 981
BseDI CCNNGG 8 cut(s) 509, 540, 578, 712, 728, 748, 1112, 1353
BseLI CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
BseMI GCAATG 1 cut(s) 1022
BseMII CTCAG 2 cut(s) 18, 873
BseNI ACTGG 3 cut(s) 129, 271, 1005
BseRI GAGGAG 2 cut(s) 224, 389
BseXI GCAGC 2 cut(s) 1503, 1965
BseYI CCCAGC 1 cut(s) 2018
BsgI GTGCAG 4 cut(s) 300, 326, 1438, 1510
Bsh1236I CGCG 2 cut(s) 97, 542
Bsh1285I CGRYCG 1 cut(s) 611
BshFI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BshNI GGYRCC 3 cut(s) 22, 2077, 2124
BshTI ACCGGT 1 cut(s) 606
BshVI ATCGAT 1 cut(s) 981
BsiEI CGRYCG 1 cut(s) 611
BsiHKAI GWGCWC 1 cut(s) 1106
BsiHKCI CYCGRG 3 cut(s) 57, 773, 1252
BsiSI CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
BslFI GGGAC 5 cut(s) 217, 745, 765, 1155, 1927
BslI CCNNNNNNNGG 4 cut(s) 41, 335, 336, 594
BsmAI GTCTC 2 cut(s) 257, 929
BsmFI GGGAC 5 cut(s) 217, 745, 765, 1155, 1927
BsnI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BsoBI CYCGRG 3 cut(s) 57, 773, 1252
Bsp1286I GDGCHC 1 cut(s) 1106
Bsp13I TCCGGA 2 cut(s) 88, 665
Bsp1407I TGTACA 2 cut(s) 404, 1880
Bsp143I GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
BspANI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BspCNI CTCAG 2 cut(s) 19, 872
BspDI ATCGAT 1 cut(s) 981
BspEI TCCGGA 2 cut(s) 88, 665
BspFNI CGCG 2 cut(s) 97, 542
BspHI TCATGA 1 cut(s) 687
BspPI GGATC 6 cut(s) 348, 373, 404, 1090, 1103, 1529
BspT107I GGYRCC 3 cut(s) 22, 2077, 2124
BsrBI CCGCTC 2 cut(s) 601, 1348
BsrDI GCAATG 1 cut(s) 1022
BsrFI RCCGGY 2 cut(s) 606, 1948
BsrGI TGTACA 2 cut(s) 404, 1880
BsrI ACTGG 3 cut(s) 129, 271, 1005
BssAI RCCGGY 2 cut(s) 606, 1948
BssECI CCNNGG 8 cut(s) 509, 540, 578, 712, 728, 748, 1112, 1353
BssMI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
BssSI CACGAG 1 cut(s) 681
BssT1I CCWWGG 4 cut(s) 578, 712, 728, 1112
Bst2BI CACGAG 1 cut(s) 681
Bst2UI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
Bst4CI ACNGT 6 cut(s) 527, 736, 808, 1452, 1731, 1803
Bst6I CTCTTC 3 cut(s) 960, 1433, 1937
BstAPI GCANNNNNTGC 2 cut(s) 287, 1700
BstAUI TGTACA 2 cut(s) 404, 1880
BstBAI YACGTR 1 cut(s) 1263
BstDEI CTNAG 3 cut(s) 27, 859, 1705
BstDSI CCRYGG 1 cut(s) 540
BstFNI CGCG 2 cut(s) 97, 542
BstH2I RGCGCY 1 cut(s) 2054
BstHHI GCGC 3 cut(s) 157, 292, 2053
BstKTI GATC 9 cut(s) 56, 343, 381, 412, 1098, 1290, 1387, 1537, 1714
BstMAI GTCTC 2 cut(s) 257, 929
BstMBI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
BstMCI CGRYCG 1 cut(s) 611
BstMWI GCNNNNNNNGC 3 cut(s) 287, 1038, 1700
BstNI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
BstNSI RCATGY 1 cut(s) 1342
BstPAI GACNNNNGTC 1 cut(s) 757
BstSCI CCNGG 8 cut(s) 508, 747, 1298, 1314, 1324, 1353, 2068, 2080
BstUI CGCG 2 cut(s) 97, 542
BstV1I GCAGC 2 cut(s) 1503, 1965
BstV2I GAAGAC 2 cut(s) 1062, 1213
BstX2I RGATCY 5 cut(s) 53, 340, 378, 409, 1095
BstXI CCANNNNNNTGG 2 cut(s) 719, 1402
BstYI RGATCY 5 cut(s) 53, 340, 378, 409, 1095
Bsu15I ATCGAT 1 cut(s) 981
BsuRI GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
BsuTUI ATCGAT 1 cut(s) 981
BtgI CCRYGG 1 cut(s) 540
BtrI CACGTC 1 cut(s) 495
BtsI GCAGTG 3 cut(s) 141, 288, 1413
BtsIMutI CAGTG 5 cut(s) 141, 288, 372, 537, 1413
CaiI CAGNNNCTG 1 cut(s) 413
CciI TCATGA 1 cut(s) 687
CfoI GCGC 3 cut(s) 157, 292, 2053
Cfr10I RCCGGY 2 cut(s) 606, 1948
Cfr13I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
Cfr42I CCGCGG 1 cut(s) 543
ClaI ATCGAT 1 cut(s) 981
CsiI ACCWGGT 1 cut(s) 1298
Csp6I GTAC 8 cut(s) 122, 233, 405, 637, 804, 1881, 1910, 1926
CspAI ACCGGT 1 cut(s) 606
CviAII CATG 9 cut(s) 112, 148, 331, 688, 702, 1071, 1339, 2047, 2103
CviQI GTAC 8 cut(s) 122, 233, 405, 637, 804, 1881, 1910, 1926
DdeI CTNAG 3 cut(s) 27, 859, 1705
DpnI GATC 9 cut(s) 55, 342, 380, 411, 1097, 1289, 1386, 1536, 1713
DpnII GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
DraI TTTAAA 1 cut(s) 1456
DraIII CACNNNGTG 1 cut(s) 1878
DrdI GACNNNNNNGTC 1 cut(s) 195
DseDI GACNNNNNNGTC 1 cut(s) 195
Eam1104I CTCTTC 3 cut(s) 960, 1433, 1937
EarI CTCTTC 3 cut(s) 960, 1433, 1937
EciI GGCGGA 1 cut(s) 143
Ecl136II GAGCTC 1 cut(s) 1104
Eco130I CCWWGG 4 cut(s) 578, 712, 728, 1112
Eco24I GRGCYC 1 cut(s) 1106
Eco32I GATATC 1 cut(s) 2026
Eco47I GGWCC 3 cut(s) 537, 663, 1169
Eco53kI GAGCTC 1 cut(s) 1104
Eco57I CTGAAG 1 cut(s) 579
Eco72I CACGTG 1 cut(s) 1263
Eco88I CYCGRG 3 cut(s) 57, 773, 1252
EcoICRI GAGCTC 1 cut(s) 1104
EcoRI GAATTC 1 cut(s) 346
EcoRII CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
EcoRV GATATC 1 cut(s) 2026
EcoT14I CCWWGG 4 cut(s) 578, 712, 728, 1112
EcoT22I ATGCAT 1 cut(s) 2067
EcoT38I GRGCYC 1 cut(s) 1106
ErhI CCWWGG 4 cut(s) 578, 712, 728, 1112
FaeI CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
FalI AAGNNNNNCTT 4 cut(s) 605, 637, 1632, 1664
FaqI GGGAC 5 cut(s) 217, 745, 765, 1155, 1927
FatI CATG 9 cut(s) 111, 147, 330, 687, 701, 1070, 1338, 2046, 2102
FauI CCCGC 2 cut(s) 390, 425
FauNDI CATATG 1 cut(s) 567
Fnu4HI GCNGC 3 cut(s) 599, 1492, 1979
FriOI GRGCYC 1 cut(s) 1106
Fsp4HI GCNGC 3 cut(s) 599, 1492, 1979
FspBI CTAG 3 cut(s) 387, 441, 579
FspI TGCGCA 1 cut(s) 291
GlaI GCGC 3 cut(s) 156, 291, 2052
GluI GCNGC 3 cut(s) 599, 1492, 1979
GsaI CCCAGC 1 cut(s) 2022
GsuI CTGGAG 2 cut(s) 731, 988
HaeII RGCGCY 1 cut(s) 2054
HaeIII GGCC 8 cut(s) 45, 508, 514, 587, 598, 1251, 1601, 2085
HapII CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
HhaI GCGC 3 cut(s) 157, 292, 2053
Hin1II CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
Hin6I GCGC 3 cut(s) 155, 290, 2051
HinP1I GCGC 3 cut(s) 155, 290, 2051
HindIII AAGCTT 1 cut(s) 1646
HinfI GANTC 7 cut(s) 77, 475, 669, 684, 744, 1664, 1688
HpaII CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
HphI GGTGA 7 cut(s) 151, 1007, 1129, 1355, 1379, 1799, 1904
Hpy166II GTNNAC 5 cut(s) 221, 1026, 1881, 1928, 2044
Hpy188I TCNGA 6 cut(s) 345, 793, 970, 1011, 1384, 1783
Hpy8I GTNNAC 5 cut(s) 221, 1026, 1881, 1928, 2044
Hpy99I CGWCG 3 cut(s) 192, 499, 1833
HpyAV CCTTC 9 cut(s) 168, 415, 928, 1190, 1237, 1400, 1569, 1615, 1759
HpyCH4III ACNGT 6 cut(s) 527, 736, 808, 1452, 1731, 1803
HpyCH4IV ACGT 5 cut(s) 494, 635, 647, 1262, 1816
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 1038, 1700
HpyF3I CTNAG 3 cut(s) 27, 859, 1705
HpySE526I ACGT 5 cut(s) 494, 635, 647, 1262, 1816
Hsp92II CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
HspAI GCGC 3 cut(s) 155, 290, 2051
Kpn2I TCCGGA 2 cut(s) 88, 665
KspI CCGCGG 1 cut(s) 543
Kzo9I GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
LmnI GCTCC 2 cut(s) 606, 1616
Lsp1109I GCAGC 2 cut(s) 1503, 1965
LweI GCATC 5 cut(s) 121, 841, 1041, 2052, 2074
MabI ACCWGGT 1 cut(s) 1298
MaeI CTAG 3 cut(s) 387, 441, 579
MaeII ACGT 5 cut(s) 494, 635, 647, 1262, 1816
MaeIII GTNAC 7 cut(s) 476, 1074, 1318, 1357, 1725, 1823, 2143
MalI GATC 9 cut(s) 55, 342, 380, 411, 1097, 1289, 1386, 1536, 1713
MbiI CCGCTC 2 cut(s) 601, 1348
MboI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
MflI RGATCY 5 cut(s) 53, 340, 378, 409, 1095
MhlI GDGCHC 1 cut(s) 1106
MlyI GAGTC 3 cut(s) 484, 693, 738
MmeI TCCRAC 2 cut(s) 771, 1284
Mph1103I ATGCAT 1 cut(s) 2067
MroI TCCGGA 2 cut(s) 88, 665
MroXI GAANNNNTTC 1 cut(s) 1200
MslI CAYNNNNRTG 2 cut(s) 981, 1815
MspA1I CMGCKG 1 cut(s) 542
MspI CCGG 7 cut(s) 89, 158, 607, 666, 1325, 1685, 1949
MspR9I CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
MvaI CCWGG 7 cut(s) 510, 749, 1300, 1316, 1355, 2070, 2082
MvnI CGCG 2 cut(s) 97, 542
MwoI GCNNNNNNNGC 3 cut(s) 287, 1038, 1700
NciI CCSGG 1 cut(s) 1326
NdeI CATATG 1 cut(s) 567
NdeII GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
NlaIII CATG 9 cut(s) 115, 151, 334, 691, 705, 1074, 1342, 2050, 2106
NmuCI GTSAC 3 cut(s) 476, 1074, 2143
NsbI TGCGCA 1 cut(s) 291
NsiI ATGCAT 1 cut(s) 2067
NspI RCATGY 1 cut(s) 1342
PagI TCATGA 1 cut(s) 687
PciI ACATGT 1 cut(s) 1338
PcsI WCGNNNNNNNCGW 1 cut(s) 1979
PdmI GAANNNNTTC 1 cut(s) 1200
PfeI GAWTC 4 cut(s) 77, 669, 1664, 1688
PinAI ACCGGT 1 cut(s) 606
PkrI GCNGC 3 cut(s) 600, 1493, 1980
PleI GAGTC 3 cut(s) 483, 692, 738
PmaCI CACGTG 1 cut(s) 1263
PmlI CACGTG 1 cut(s) 1263
PpsI GAGTC 3 cut(s) 483, 692, 738
Ppu21I YACGTR 1 cut(s) 1263
PscI ACATGT 1 cut(s) 1338
PshAI GACNNNNGTC 1 cut(s) 757
PshBI ATTAAT 1 cut(s) 1992
Psp124BI GAGCTC 1 cut(s) 1106
Psp1406I AACGTT 1 cut(s) 647
Psp6I CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
PspCI CACGTG 1 cut(s) 1263
PspFI CCCAGC 1 cut(s) 2018
PspGI CCWGG 7 cut(s) 508, 747, 1298, 1314, 1353, 2068, 2080
PspPI GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 5 cut(s) 53, 340, 378, 409, 1095
RsaI GTAC 8 cut(s) 123, 234, 406, 638, 805, 1882, 1911, 1927
RsaNI GTAC 8 cut(s) 122, 233, 405, 637, 804, 1881, 1910, 1926
RseI CAYNNNNRTG 2 cut(s) 981, 1815
SacI GAGCTC 1 cut(s) 1106
SacII CCGCGG 1 cut(s) 543
SatI GCNGC 3 cut(s) 599, 1492, 1979
Sau3AI GATC 9 cut(s) 53, 340, 378, 409, 1095, 1287, 1384, 1534, 1711
Sau96I GGNCC 9 cut(s) 506, 512, 537, 585, 663, 1169, 1250, 1600, 2084
SchI GAGTC 3 cut(s) 484, 693, 738
ScrFI CCNGG 8 cut(s) 510, 749, 1300, 1316, 1326, 1355, 2070, 2082
SduI GDGCHC 1 cut(s) 1106
SexAI ACCWGGT 1 cut(s) 1298
SfaNI GCATC 5 cut(s) 121, 841, 1041, 2052, 2074
Sfr303I CCGCGG 1 cut(s) 543
SgrBI CCGCGG 1 cut(s) 543
SinI GGWCC 3 cut(s) 537, 663, 1169
SmiMI CAYNNNNRTG 2 cut(s) 981, 1815
SspI AATATT 1 cut(s) 1906
SspMI CTAG 3 cut(s) 387, 441, 579
SstI GAGCTC 1 cut(s) 1106
StyD4I CCNGG 8 cut(s) 508, 747, 1298, 1314, 1324, 1353, 2068, 2080
StyI CCWWGG 4 cut(s) 578, 712, 728, 1112
TaaI ACNGT 6 cut(s) 527, 736, 808, 1452, 1731, 1803
TaiI ACGT 5 cut(s) 497, 638, 650, 1265, 1819
TatI WGTACW 5 cut(s) 121, 404, 803, 1880, 1909
TauI GCSGC 1 cut(s) 601
TfiI GAWTC 4 cut(s) 77, 669, 1664, 1688
TscAI CASTG 5 cut(s) 141, 288, 372, 537, 1413
TseFI GTSAC 3 cut(s) 476, 1074, 2143
TseI GCWGC 2 cut(s) 1491, 1978
Tsp45I GTSAC 3 cut(s) 476, 1074, 2143
TspDTI ATGAA 9 cut(s) 17, 78, 584, 704, 758, 1152, 1799, 2018, 2052
TspGWI ACGGA 4 cut(s) 205, 221, 242, 644
TspRI CASTG 5 cut(s) 141, 288, 372, 537, 1413
VpaK11BI GGWCC 3 cut(s) 537, 663, 1169
VspI ATTAAT 1 cut(s) 1992
XapI RAATTY 3 cut(s) 346, 765, 1457
XceI RCATGY 1 cut(s) 1342
XmaJI CCTAGG 1 cut(s) 578
XmnI GAANNNNTTC 1 cut(s) 1200
XspI CTAG 3 cut(s) 387, 441, 579
Zsp2I ATGCAT 1 cut(s) 2067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.