Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0411551 RchiOBHm_Chr7g0229601 |
| rosa_laevigata | RLG00000008199 RLG00000008346 |
| rosa_multiflora | Rmu_sc0003660.1_g000002 Rmu_sc0007538.1_g000014 Rmu_ssc0000281.1_g000012 |
| rosa_rugosa | Rorug07G0192000 |
| rosa_samantha | Rh4BG165600 Rh5AG246500 Rh5CG244600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 165 |
| AarI | CACCTGC | 1 cut(s) | 30 |
| Acc36I | ACCTGC | 1 cut(s) | 30 |
| AciI | CCGC | 2 cut(s) | 287, 310 |
| AfaI | GTAC | 1 cut(s) | 92 |
| AluBI | AGCT | 1 cut(s) | 281 |
| AluI | AGCT | 1 cut(s) | 281 |
| Ama87I | CYCGRG | 2 cut(s) | 94, 120 |
| AvaI | CYCGRG | 2 cut(s) | 94, 120 |
| BfaI | CTAG | 1 cut(s) | 39 |
| BfuAI | ACCTGC | 1 cut(s) | 30 |
| BmcAI | AGTACT | 1 cut(s) | 92 |
| BmeT110I | CYCGRG | 2 cut(s) | 94, 120 |
| BmsI | GCATC | 2 cut(s) | 222, 255 |
| BpmI | CTGGAG | 1 cut(s) | 257 |
| BpuEI | CTTGAG | 1 cut(s) | 47 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 190, 220 |
| BseRI | GAGGAG | 1 cut(s) | 314 |
| BsgI | GTGCAG | 1 cut(s) | 209 |
| BsiHKCI | CYCGRG | 2 cut(s) | 94, 120 |
| BsoBI | CYCGRG | 2 cut(s) | 94, 120 |
| BspACI | CCGC | 2 cut(s) | 287, 310 |
| BspHI | TCATGA | 1 cut(s) | 52 |
| BspMI | ACCTGC | 1 cut(s) | 30 |
| BstC8I | GCNNGC | 1 cut(s) | 16 |
| BstDEI | CTNAG | 1 cut(s) | 87 |
| BveI | ACCTGC | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 1 cut(s) | 16 |
| CciI | TCATGA | 1 cut(s) | 52 |
| Csp6I | GTAC | 1 cut(s) | 91 |
| CviAII | CATG | 3 cut(s) | 53, 139, 255 |
| CviJI | RGCY | 2 cut(s) | 119, 281 |
| CviKI_1 | RGCY | 2 cut(s) | 119, 281 |
| CviQI | GTAC | 1 cut(s) | 91 |
| DdeI | CTNAG | 1 cut(s) | 87 |
| DraI | TTTAAA | 1 cut(s) | 7 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| Eco88I | CYCGRG | 2 cut(s) | 94, 120 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| FaeI | CATG | 3 cut(s) | 56, 142, 258 |
| FaiI | YATR | 8 cut(s) | 54, 140, 165, 173, 186, 228, 256, 331 |
| FatI | CATG | 3 cut(s) | 52, 138, 254 |
| FauI | CCCGC | 1 cut(s) | 280 |
| FspBI | CTAG | 1 cut(s) | 39 |
| GsuI | CTGGAG | 1 cut(s) | 257 |
| Hin1II | CATG | 3 cut(s) | 56, 142, 258 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 96 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 190 |
| HpyF3I | CTNAG | 1 cut(s) | 87 |
| Hsp92II | CATG | 3 cut(s) | 56, 142, 258 |
| LpnPI | CCDG | 4 cut(s) | 35, 156, 180, 221 |
| LweI | GCATC | 2 cut(s) | 222, 255 |
| MaeI | CTAG | 1 cut(s) | 39 |
| MaeIII | GTNAC | 2 cut(s) | 82, 157 |
| MseI | TTAA | 1 cut(s) | 6 |
| NlaIII | CATG | 3 cut(s) | 56, 142, 258 |
| PaeR7I | CTCGAG | 1 cut(s) | 94 |
| PagI | TCATGA | 1 cut(s) | 52 |
| PaqCI | CACCTGC | 1 cut(s) | 30 |
| PsiI | TTATAA | 1 cut(s) | 165 |
| RsaI | GTAC | 1 cut(s) | 92 |
| RsaNI | GTAC | 1 cut(s) | 91 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| ScaI | AGTACT | 1 cut(s) | 92 |
| SetI | ASST | 4 cut(s) | 24, 103, 203, 283 |
| SfaNI | GCATC | 2 cut(s) | 222, 255 |
| Sfr274I | CTCGAG | 1 cut(s) | 94 |
| SlaI | CTCGAG | 1 cut(s) | 94 |
| SmlI | CTYRAG | 2 cut(s) | 26, 94 |
| SmoI | CTYRAG | 2 cut(s) | 26, 94 |
| SsiI | CCGC | 2 cut(s) | 287, 310 |
| SspMI | CTAG | 1 cut(s) | 39 |
| TaqI | TCGA | 4 cut(s) | 95, 111, 180, 263 |
| TatI | WGTACW | 1 cut(s) | 90 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| TspDTI | ATGAA | 2 cut(s) | 41, 56 |
| XhoI | CTCGAG | 1 cut(s) | 94 |
| XspI | CTAG | 1 cut(s) | 39 |
| ZrmI | AGTACT | 1 cut(s) | 92 |