Rmu_sc0008251.1_g000001

Ankyrin repeat and zinc finger domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008251.1
Physical Location & Seq
Forward (+)
4430 .. 10893
6464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008251.1_g000001.1.cds

Sequence Viewer

Length: 2385 bp
atggcgtcggagcctcttcgcaccaccacgaccgccgccgaaaaagagaaacggcaccgttccatcttcgaactcccggccaacttcttcgactcctgcgccctcctcacttcttctggcctctcagttgcttcaactttcgagacctctaacaacagcaacaactccgccctcgaaaccctagacgagtctgtgtccgataacaccgatcaagaccgctccctaaacgccgccgtatcgactcggtggacctgcaacacttgcaaggctgagttcgagtccctccaagagcagcgatttcacttcaaatccgatattcaccgattcaatgatattcaagagctacttgctgcatggaagccttattttgatgcttcgtcttgcgtttttgtttatgctccttctagtaatcatcagctgctatctaatagggagacaccgtattttagtcatcagaaagtccgaaatattccaatccctattcggagacctactatgaaggaagctcggcggatatatgaacagttgacacaagtctcttatgaacaagaggagaatgaagctcctttagttaccaaaaaggaattgccgtctagttcaggaattgaaaatgatatcatctcaagcatggcgaaagtcaacattgttgagccttttgttgagcctagtacagaagcttgctcaagtactagagagtccaatgaactccctatatcaagtgagagtagtaatgaggttaagggttcgtcaacacctttgcatgaggcagcacagtctgggaatgctctcaaggttttggaactcttggaacagggtttggatccttgtgccagagatgaaaggggacagactccatacacggtagcaaacgaaaaggaggtcagaaacacatttagacggttcatggcctcaaatctagataagtgggattggaatgctgctaaggtacctagtgcattgacaaaggagatggaggaatctcaagctgctaagcaggctgaaaaagaagcgaaaaggaaagctaaagcaaaagaattgaagaaactacgcaaagaaaaagaaaagaaagctcaggctgaggctgctgcttccaagaatacttcgaccattacaaagtcctcttcatcatctcagcccagtcgtgcatcacagatctctaaagaggaggaactgaaaagggccctggtagccgagagggaaaaacgagcagccgcagccgagcagagaatggctgcagctgcagcccttagtgctcaaggtaatagcaccactccacaacccaaaactggggaagctagtgaaattaactgctcttgttgtaatgtgtctctggctggatctgaaggtggcgatggtggctgtggctatggtccaagtgatgctaatggcggtggtaccagggatggtgggggtggtggtggtgttagtggcaagttagtgatgacgacaaagatgatcacgggggcaaggacaatggtagtggcaggggttggtggtgatggctttagggattttggctattatcatcaaattttggaaataacgggggcaatgacaatggtagtggcaggggttggtggtgatggctttagggattttggctattatcatcaaattttggaaataacgggggcaatgacaatggtagtggcaggggttggtggtgatggctttagggattttggctattatcatcaaattttggaaataacgggggcaatgacaatggtagtggcaggggttggtggtgatggctttagggattttggctattatcatcaaattttggaaataacgggggcaatgacaatggtagtggcaggggttggtggtgatggctttagggattttggctattatcatcaaattttggaaataacgggggcaatgacaatggtagtggcaggggttggtggtgatggctttagggattttggctattatcatcaaattttggaaataacgggggcaatgacaatggtagtggcaggggttgagtctgcagcttccaagactatttcgatgatttcaaagtcctcttcatcatctcatcctagtcgtggatcacagatctctaaagaggaggaactgaaaagggcactggcaaccgagagggaaaaacgagcagccgcagccgagcggagaatggctgcagctgcagcccttagtgctcaaggtaatagcaccactccacaacccaaaactggggaagctggtgaaggtgccgatggtggttgtggctatggtccaagtgatgctaatggcggtggtgccagggatggtggtggtggtggtggtcgtgttagtggcaaattagtgatgataattgtggtggtcacaacgatggctctcaagtggtggcagtggcgacgcagacgacaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

794

Amino Acids

85.23

Weight (kDa)

6.12

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 260
Acc65I GGTACC 2 cut(s) 946, 1394
AccB1I GGYRCC 5 cut(s) 54, 946, 1394, 2222, 2270
AccBSI CCGCTC 2 cut(s) 219, 2140
AclWI GGATC 4 cut(s) 815, 828, 1345, 2071
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 6 cut(s) 1530, 1614, 1698, 1782, 1866, 1950
AcuI CTGAAG 1 cut(s) 1362
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 670, 688, 948, 1396
AfiI CCNNNNNNNGG 5 cut(s) 1286, 1287, 2060, 2204, 2205
AgsI TTSAA 7 cut(s) 135, 307, 328, 338, 608, 1039, 2031
AjnI CCWGG 3 cut(s) 1182, 1397, 2273
Alw21I GWGCWC 2 cut(s) 1255, 2173
Alw26I GTCTC 5 cut(s) 137, 428, 481, 541, 1332
AlwI GGATC 4 cut(s) 815, 828, 1345, 2071
AoxI GGCC 4 cut(s) 78, 118, 906, 1179
ApaI GGGCCC 1 cut(s) 1183
ApoI RAATTY 6 cut(s) 1530, 1614, 1698, 1782, 1866, 1950
ArsI GACNNNNNNTTYG 2 cut(s) 864, 896
Asp718I GGTACC 2 cut(s) 946, 1394
AspLEI GCGC 1 cut(s) 101
AspS9I GGNCC 5 cut(s) 249, 1179, 1180, 1370, 2246
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 8 cut(s) 311, 1508, 1592, 1676, 1760, 1844, 1928, 2228
AsuII TTCGAA 1 cut(s) 69
AvaII GGWCC 3 cut(s) 249, 1370, 2246
BaeGI GKGCMC 2 cut(s) 1183, 2101
BamHI GGATCC 1 cut(s) 820
BanI GGYRCC 5 cut(s) 54, 946, 1394, 2222, 2270
BanII GRGCYC 1 cut(s) 1183
Bbv12I GWGCWC 2 cut(s) 1255, 2173
BbvCI CCTCAGC 1 cut(s) 1077
BceAI ACGGC 3 cut(s) 68, 218, 574
BciT130I CCWGG 3 cut(s) 1184, 1399, 2275
BclI TGATCA 1 cut(s) 1455
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 5 cut(s) 137, 428, 481, 541, 1332
BfaI CTAG 9 cut(s) 182, 405, 594, 666, 690, 917, 951, 1296, 2055
BfmI CTRYAG 5 cut(s) 1233, 1239, 2001, 2151, 2157
BfuAI ACCTGC 1 cut(s) 260
BglII AGATCT 2 cut(s) 1152, 2070
BlpI GCTNAGC 1 cut(s) 990
BmcAI AGTACT 1 cut(s) 688
Bme1390I CCNGG 4 cut(s) 77, 1184, 1399, 2275
Bme18I GGWCC 3 cut(s) 249, 1370, 2246
BmgT120I GGNCC 5 cut(s) 249, 1179, 1180, 1370, 2246
BmiI GGNNCC 8 cut(s) 12, 56, 822, 948, 1181, 1396, 2224, 2272
BmrFI CCNGG 4 cut(s) 77, 1184, 1399, 2275
BmrI ACTGGG 3 cut(s) 1131, 1296, 2214
BmsI GCATC 4 cut(s) 361, 1154, 1369, 2245
BmuI ACTGGG 3 cut(s) 1131, 1296, 2214
BoxI GACNNNNGTC 1 cut(s) 533
Bpu10I CCTNAGC 3 cut(s) 942, 1071, 1077
Bpu1102I GCTNAGC 1 cut(s) 990
Bpu14I TTCGAA 1 cut(s) 69
BpuEI CTTGAG 7 cut(s) 607, 667, 773, 966, 1239, 2157, 2336
BpuMI CCSGG 1 cut(s) 77
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 2 cut(s) 137, 481
BsaJI CCNNGG 3 cut(s) 1182, 1398, 2274
BsaXI ACNNNNNCTCC 2 cut(s) 425, 455
Bsc4I CCNNNNNNNGG 5 cut(s) 1286, 1287, 2060, 2204, 2205
Bse1I ACTGG 4 cut(s) 1137, 1291, 2106, 2209
Bse3DI GCAATG 6 cut(s) 1557, 1641, 1725, 1809, 1893, 1977
BseBI CCWGG 3 cut(s) 1184, 1399, 2275
BseDI CCNNGG 3 cut(s) 1182, 1398, 2274
BseGI GGATG 3 cut(s) 1408, 2050, 2284
BseLI CCNNNNNNNGG 5 cut(s) 1286, 1287, 2060, 2204, 2205
BseMI GCAATG 6 cut(s) 1557, 1641, 1725, 1809, 1893, 1977
BseMII CTCAG 5 cut(s) 138, 261, 1068, 1085, 1145
BseNI ACTGG 4 cut(s) 1137, 1291, 2106, 2209
BseRI GAGGAG 4 cut(s) 95, 566, 1178, 2096
BseSI GKGCMC 2 cut(s) 1183, 2101
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 4 cut(s) 80, 120, 908, 1181
BshNI GGYRCC 5 cut(s) 54, 946, 1394, 2222, 2270
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 2 cut(s) 1255, 2173
BsiSI CCGG 1 cut(s) 77
BslFI GGGAC 2 cut(s) 265, 858
BslI CCNNNNNNNGG 5 cut(s) 1286, 1287, 2060, 2204, 2205
BsmAI GTCTC 5 cut(s) 137, 428, 481, 541, 1332
BsmFI GGGAC 2 cut(s) 265, 858
BsmI GAATGC 2 cut(s) 787, 940
BsnI GGCC 4 cut(s) 80, 120, 908, 1181
Bso31I GGTCTC 2 cut(s) 137, 481
Bsp119I TTCGAA 1 cut(s) 69
Bsp120I GGGCCC 1 cut(s) 1179
Bsp1286I GDGCHC 4 cut(s) 1183, 1255, 2101, 2173
Bsp143I GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
Bsp1720I GCTNAGC 1 cut(s) 990
BspANI GGCC 4 cut(s) 80, 120, 908, 1181
BspCNI CTCAG 5 cut(s) 137, 262, 1069, 1084, 1144
BspLI GGNNCC 8 cut(s) 12, 56, 822, 948, 1181, 1396, 2224, 2272
BspMAI CTGCAG 5 cut(s) 1237, 1243, 2005, 2155, 2161
BspMI ACCTGC 1 cut(s) 260
BspPI GGATC 4 cut(s) 815, 828, 1345, 2071
BspT104I TTCGAA 1 cut(s) 69
BspT107I GGYRCC 5 cut(s) 54, 946, 1394, 2222, 2270
BspTNI GGTCTC 2 cut(s) 137, 481
BsrBI CCGCTC 2 cut(s) 219, 2140
BsrDI GCAATG 6 cut(s) 1557, 1641, 1725, 1809, 1893, 1977
BsrI ACTGG 4 cut(s) 1137, 1291, 2106, 2209
BssECI CCNNGG 3 cut(s) 1182, 1398, 2274
BssMI GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 3 cut(s) 1184, 1399, 2275
Bst4CI ACNGT 6 cut(s) 59, 441, 525, 774, 862, 900
Bst6I CTCTTC 3 cut(s) 21, 1126, 2044
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 261
BstBI TTCGAA 1 cut(s) 69
BstC8I GCNNGC 2 cut(s) 679, 996
BstDEI CTNAG 9 cut(s) 124, 270, 942, 990, 1071, 1077, 1131, 1247, 2165
BstF5I GGATG 3 cut(s) 1408, 2050, 2284
BstHHI GCGC 1 cut(s) 101
BstKTI GATC 7 cut(s) 211, 823, 1155, 1340, 1458, 2066, 2073
BstMAI GTCTC 5 cut(s) 137, 428, 481, 541, 1332
BstMBI GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
BstMCI CGRYCG 1 cut(s) 33
BstNI CCWGG 3 cut(s) 1184, 1399, 2275
BstPAI GACNNNNGTC 1 cut(s) 533
BstSCI CCNGG 4 cut(s) 75, 1182, 1397, 2273
BstSFI CTRYAG 5 cut(s) 1233, 1239, 2001, 2151, 2157
BstSLI GKGCMC 2 cut(s) 1183, 2101
BstX2I RGATCY 4 cut(s) 820, 1152, 1337, 2070
BstYI RGATCY 4 cut(s) 820, 1152, 1337, 2070
BsuRI GGCC 4 cut(s) 80, 120, 908, 1181
BtgZI GCGATG 1 cut(s) 1365
BtsCI GGATG 3 cut(s) 1408, 2050, 2284
BtsI GCAGTG 1 cut(s) 2369
BtsIMutI CAGTG 2 cut(s) 2099, 2369
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 2 cut(s) 679, 996
CfoI GCGC 1 cut(s) 101
Cfr13I GGNCC 5 cut(s) 249, 1179, 1180, 1370, 2246
CseI GACGC 1 cut(s) 2379
Csp6I GTAC 4 cut(s) 669, 687, 947, 1395
CviAII CATG 4 cut(s) 354, 628, 761, 904
CviQI GTAC 4 cut(s) 669, 687, 947, 1395
DdeI CTNAG 9 cut(s) 124, 270, 942, 990, 1071, 1077, 1131, 1247, 2165
DpnI GATC 7 cut(s) 210, 822, 1154, 1339, 1457, 2065, 2072
DpnII GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 3 cut(s) 21, 1126, 2044
EarI CTCTTC 3 cut(s) 21, 1126, 2044
EciI GGCGGA 2 cut(s) 157, 526
Eco24I GRGCYC 1 cut(s) 1183
Eco31I GGTCTC 2 cut(s) 137, 481
Eco32I GATATC 1 cut(s) 616
Eco47I GGWCC 3 cut(s) 249, 1370, 2246
Eco57I CTGAAG 1 cut(s) 1362
EcoO109I RGGNCCY 2 cut(s) 1179, 1180
EcoRII CCWGG 3 cut(s) 1182, 1397, 2273
EcoRV GATATC 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 1183
FaeI CATG 4 cut(s) 357, 631, 764, 907
FalI AAGNNNNNCTT 2 cut(s) 330, 362
FaqI GGGAC 2 cut(s) 265, 858
FatI CATG 4 cut(s) 353, 627, 760, 903
FbaI TGATCA 1 cut(s) 1455
FokI GGATG 3 cut(s) 1415, 2037, 2291
FriOI GRGCYC 1 cut(s) 1183
FspBI CTAG 9 cut(s) 182, 405, 594, 666, 690, 917, 951, 1296, 2055
GlaI GCGC 1 cut(s) 100
HaeIII GGCC 4 cut(s) 80, 120, 908, 1181
HapII CCGG 1 cut(s) 77
HgaI GACGC 1 cut(s) 2379
HhaI GCGC 1 cut(s) 101
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 357, 631, 764, 907
Hin6I GCGC 1 cut(s) 99
HinP1I GCGC 1 cut(s) 99
HincII GTYRAC 3 cut(s) 528, 640, 750
HindII GTYRAC 3 cut(s) 528, 640, 750
HindIII AAGCTT 1 cut(s) 675
HinfI GANTC 9 cut(s) 92, 188, 241, 278, 324, 695, 850, 977, 1997
HpaII CCGG 1 cut(s) 77
HphI GGTGA 8 cut(s) 311, 1508, 1592, 1676, 1760, 1844, 1928, 2228
Hpy166II GTNNAC 4 cut(s) 249, 528, 640, 750
Hpy188I TCNGA 8 cut(s) 10, 199, 313, 456, 464, 486, 884, 1342
Hpy188III TCNNGA 5 cut(s) 142, 212, 338, 600, 917
Hpy8I GTNNAC 4 cut(s) 249, 528, 640, 750
Hpy99I CGWCG 2 cut(s) 10, 2373
HpyAV CCTTC 4 cut(s) 411, 493, 1337, 2213
HpyCH4III ACNGT 6 cut(s) 59, 441, 525, 774, 862, 900
HpyF3I CTNAG 9 cut(s) 124, 270, 942, 990, 1071, 1077, 1131, 1247, 2165
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 357, 631, 764, 907
HspAI GCGC 1 cut(s) 99
KpnI GGTACC 2 cut(s) 950, 1398
Ksp22I TGATCA 1 cut(s) 1455
Kzo9I GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
LmnI GCTCC 4 cut(s) 10, 224, 403, 568
LweI GCATC 4 cut(s) 361, 1154, 1369, 2245
MaeI CTAG 9 cut(s) 182, 405, 594, 666, 690, 917, 951, 1296, 2055
MaeIII GTNAC 2 cut(s) 571, 2335
MalI GATC 7 cut(s) 210, 822, 1154, 1339, 1457, 2065, 2072
MbiI CCGCTC 2 cut(s) 219, 2140
MboI GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
MboII GAAGA 7 cut(s) 8, 58, 79, 105, 1051, 1113, 2031
MflI RGATCY 4 cut(s) 820, 1152, 1337, 2070
MhlI GDGCHC 4 cut(s) 1183, 1255, 2101, 2173
MlyI GAGTC 7 cut(s) 86, 197, 235, 287, 704, 844, 2006
MseI TTAA 2 cut(s) 738, 1305
MslI CAYNNNNRTG 1 cut(s) 2342
MspA1I CMGCKG 3 cut(s) 418, 1238, 2156
MspI CCGG 1 cut(s) 77
MspR9I CCNGG 4 cut(s) 77, 1184, 1399, 2275
Mva1269I GAATGC 2 cut(s) 787, 940
MvaI CCWGG 3 cut(s) 1184, 1399, 2275
NciI CCSGG 1 cut(s) 77
NdeII GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
NlaIII CATG 4 cut(s) 357, 631, 764, 907
NlaIV GGNNCC 8 cut(s) 12, 56, 822, 948, 1181, 1396, 2224, 2272
NmeAIII GCCGAG 4 cut(s) 487, 1216, 1243, 2161
NmuCI GTSAC 1 cut(s) 2335
NspV TTCGAA 1 cut(s) 69
PctI GAATGC 2 cut(s) 787, 940
PfeI GAWTC 2 cut(s) 324, 977
PleI GAGTC 7 cut(s) 86, 196, 235, 286, 703, 844, 2005
PpsI GAGTC 7 cut(s) 86, 196, 235, 286, 703, 844, 2005
PshAI GACNNNNGTC 1 cut(s) 533
Psp6I CCWGG 3 cut(s) 1182, 1397, 2273
PspGI CCWGG 3 cut(s) 1182, 1397, 2273
PspN4I GGNNCC 8 cut(s) 12, 56, 822, 948, 1181, 1396, 2224, 2272
PspOMI GGGCCC 1 cut(s) 1179
PspPI GGNCC 5 cut(s) 249, 1179, 1180, 1370, 2246
PstI CTGCAG 5 cut(s) 1237, 1243, 2005, 2155, 2161
PsuI RGATCY 4 cut(s) 820, 1152, 1337, 2070
PvuII CAGCTG 3 cut(s) 418, 1238, 2156
RsaI GTAC 4 cut(s) 670, 688, 948, 1396
RsaNI GTAC 4 cut(s) 669, 687, 947, 1395
RseI CAYNNNNRTG 1 cut(s) 2342
SaqAI TTAA 2 cut(s) 738, 1305
Sau3AI GATC 7 cut(s) 208, 820, 1152, 1337, 1455, 2063, 2070
Sau96I GGNCC 5 cut(s) 249, 1179, 1180, 1370, 2246
ScaI AGTACT 1 cut(s) 688
SchI GAGTC 7 cut(s) 86, 197, 235, 287, 704, 844, 2006
ScrFI CCNGG 4 cut(s) 77, 1184, 1399, 2275
SduI GDGCHC 4 cut(s) 1183, 1255, 2101, 2173
SfaNI GCATC 4 cut(s) 361, 1154, 1369, 2245
SfcI CTRYAG 5 cut(s) 1233, 1239, 2001, 2151, 2157
SfuI TTCGAA 1 cut(s) 69
SinI GGWCC 3 cut(s) 249, 1370, 2246
SmiMI CAYNNNNRTG 1 cut(s) 2342
SmlI CTYRAG 7 cut(s) 622, 682, 788, 981, 1254, 2172, 2351
SmoI CTYRAG 7 cut(s) 622, 682, 788, 981, 1254, 2172, 2351
SspI AATATT 1 cut(s) 469
SspMI CTAG 9 cut(s) 182, 405, 594, 666, 690, 917, 951, 1296, 2055
StyD4I CCNGG 4 cut(s) 75, 1182, 1397, 2273
TaaI ACNGT 6 cut(s) 59, 441, 525, 774, 862, 900
TaqI TCGA 8 cut(s) 69, 90, 141, 174, 239, 276, 1103, 2021
TatI WGTACW 2 cut(s) 668, 686
TauI GCSGC 4 cut(s) 38, 233, 1214, 2132
TfiI GAWTC 2 cut(s) 324, 977
Tru1I TTAA 2 cut(s) 738, 1305
Tru9I TTAA 2 cut(s) 738, 1305
TscAI CASTG 2 cut(s) 2106, 2369
TseFI GTSAC 1 cut(s) 2335
Tsp45I GTSAC 1 cut(s) 2335
TspDTI ATGAA 9 cut(s) 512, 534, 558, 573, 717, 852, 892, 1113, 2031
TspRI CASTG 2 cut(s) 2106, 2369
VpaK11BI GGWCC 3 cut(s) 249, 1370, 2246
XapI RAATTY 6 cut(s) 1530, 1614, 1698, 1782, 1866, 1950
XbaI TCTAGA 1 cut(s) 916
XspI CTAG 9 cut(s) 182, 405, 594, 666, 690, 917, 951, 1296, 2055
ZrmI AGTACT 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.