Cytochrome c oxidase-assembly factor COX23
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02160 AT1G02160 |
| fragaria_vesca | FvH4_7g09140 |
| malus_domestica | MD02G1221100.v1.1 MD07G1096500.v1.1 |
| prunus_persica | Prupe.2G120100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0345181 |
| rosa_multiflora | Rmu_sc0008520.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00309200 |
| rosa_rugosa | Rorug01G0176300 |
| rosa_samantha | Rh1AG194300 Rh1BG160800 Rh1CG179100 Rh1DG191100 |
| rosa_wichuraiana | Rw1G016010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 150 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 1 cut(s) | 77 |
| AfeI | AGCGCT | 1 cut(s) | 40 |
| AluBI | AGCT | 1 cut(s) | 179 |
| AluI | AGCT | 1 cut(s) | 179 |
| Alw26I | GTCTC | 1 cut(s) | 210 |
| Aor51HI | AGCGCT | 1 cut(s) | 40 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| AspLEI | GCGC | 1 cut(s) | 41 |
| BbvI | GCAGC | 1 cut(s) | 28 |
| BcoDI | GTCTC | 1 cut(s) | 210 |
| BfaI | CTAG | 2 cut(s) | 45, 98 |
| BfoI | RGCGCY | 1 cut(s) | 42 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 163, 195, 190 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 210 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BseXI | GCAGC | 1 cut(s) | 28 |
| BsmAI | GTCTC | 1 cut(s) | 210 |
| BsmI | GAATGC | 1 cut(s) | 161 |
| Bso31I | GGTCTC | 1 cut(s) | 210 |
| BspCNI | CTCAG | 1 cut(s) | 125 |
| BspTNI | GGTCTC | 1 cut(s) | 210 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstDEI | CTNAG | 1 cut(s) | 112 |
| BstH2I | RGCGCY | 1 cut(s) | 42 |
| BstHHI | GCGC | 1 cut(s) | 41 |
| BstMAI | GTCTC | 1 cut(s) | 210 |
| BstV1I | GCAGC | 1 cut(s) | 28 |
| BtsI | GCAGTG | 1 cut(s) | 78 |
| BtsIMutI | CAGTG | 1 cut(s) | 78 |
| CfoI | GCGC | 1 cut(s) | 41 |
| CseI | GACGC | 1 cut(s) | 6 |
| Csp6I | GTAC | 1 cut(s) | 76 |
| CviJI | RGCY | 1 cut(s) | 179 |
| CviKI_1 | RGCY | 1 cut(s) | 179 |
| CviQI | GTAC | 1 cut(s) | 76 |
| DdeI | CTNAG | 1 cut(s) | 112 |
| Eco31I | GGTCTC | 1 cut(s) | 210 |
| Eco47III | AGCGCT | 1 cut(s) | 40 |
| FaiI | YATR | 2 cut(s) | 31, 150 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| FspBI | CTAG | 2 cut(s) | 45, 98 |
| FspEI | CC | 7 cut(s) | 39, 42, 48, 97, 152, 170, 187 |
| GlaI | GCGC | 1 cut(s) | 40 |
| GluI | GCNGC | 1 cut(s) | 42 |
| HaeII | RGCGCY | 1 cut(s) | 42 |
| HgaI | GACGC | 1 cut(s) | 6 |
| HhaI | GCGC | 1 cut(s) | 41 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 1 cut(s) | 39 |
| HinP1I | GCGC | 1 cut(s) | 39 |
| HincII | GTYRAC | 1 cut(s) | 21 |
| HindII | GTYRAC | 1 cut(s) | 21 |
| HinfI | GANTC | 1 cut(s) | 56 |
| Hpy166II | GTNNAC | 2 cut(s) | 21, 78 |
| Hpy188I | TCNGA | 2 cut(s) | 55, 115 |
| Hpy188III | TCNNGA | 3 cut(s) | 98, 131, 216 |
| Hpy8I | GTNNAC | 2 cut(s) | 21, 78 |
| HpyCH4V | TGCA | 1 cut(s) | 159 |
| HpyF3I | CTNAG | 1 cut(s) | 112 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 1 cut(s) | 39 |
| LmnI | GCTCC | 1 cut(s) | 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 28 |
| MaeI | CTAG | 2 cut(s) | 45, 98 |
| MnlI | CCTC | 2 cut(s) | 36, 94 |
| Mva1269I | GAATGC | 1 cut(s) | 161 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 187 |
| PctI | GAATGC | 1 cut(s) | 161 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| PsiI | TTATAA | 1 cut(s) | 150 |
| RsaI | GTAC | 1 cut(s) | 77 |
| RsaNI | GTAC | 1 cut(s) | 76 |
| SatI | GCNGC | 1 cut(s) | 42 |
| SetI | ASST | 3 cut(s) | 28, 181, 206 |
| SgeI | CNNG | 9 cut(s) | 24, 48, 57, 110, 130, 143, 172, 192, 208 |
| SspMI | CTAG | 2 cut(s) | 45, 98 |
| TaqI | TCGA | 2 cut(s) | 11, 181 |
| TatI | WGTACW | 1 cut(s) | 75 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| TscAI | CASTG | 1 cut(s) | 85 |
| TseI | GCWGC | 1 cut(s) | 41 |
| TspRI | CASTG | 1 cut(s) | 85 |
| XbaI | TCTAGA | 1 cut(s) | 97 |
| XspI | CTAG | 2 cut(s) | 45, 98 |