Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
37108509 .. 37113024
Rh1AG194300.1
Length: 195 bp
ATGGCATCATCGAGTGCGTCAACACCTCCATACCCAAGCGCTGCTAGAATCTCTGATTCTCAATGTTATCAGCAGTACACTGCCTCTCTCAAATGTCTAGAAAAATATCACTCAGACAAGAGCAAATGTCAAGAACATTTTGATATTTATAAAGAATGCAAGAAAAAGGAGGTATTGTTGCTTTTAGATTCTTAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
7.65
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| CHCH |
PF06747 |
22 - 56 |
4.5e-08 |
CHCH domain |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0016127)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AanI |
TTATAA |
1 cut(s)
|
150 |
| AfaI |
GTAC |
1 cut(s)
|
77 |
| AfeI |
AGCGCT |
1 cut(s)
|
40 |
| Aor51HI |
AGCGCT |
1 cut(s)
|
40 |
| ApeKI |
GCWGC |
1 cut(s)
|
41 |
| AspLEI |
GCGC |
1 cut(s)
|
41 |
| BbvI |
GCAGC |
1 cut(s)
|
28 |
| BfaI |
CTAG |
2 cut(s)
|
45, 98 |
| BfoI |
RGCGCY |
1 cut(s)
|
42 |
| BisI |
GCNGC |
1 cut(s)
|
42 |
| BlsI |
GCNGC |
1 cut(s)
|
43 |
| BmsI |
GCATC |
1 cut(s)
|
14 |
| BsaXI |
ACNNNNNCTCC |
2 cut(s)
|
161, 191 |
| BseMII |
CTCAG |
1 cut(s)
|
126 |
| BseXI |
GCAGC |
1 cut(s)
|
28 |
| BsmI |
GAATGC |
1 cut(s)
|
161 |
| BspCNI |
CTCAG |
1 cut(s)
|
125 |
| BstDEI |
CTNAG |
1 cut(s)
|
112 |
| BstH2I |
RGCGCY |
1 cut(s)
|
42 |
| BstHHI |
GCGC |
1 cut(s)
|
41 |
| BstV1I |
GCAGC |
1 cut(s)
|
28 |
| BtsI |
GCAGTG |
1 cut(s)
|
78 |
| BtsIMutI |
CAGTG |
1 cut(s)
|
78 |
| CfoI |
GCGC |
1 cut(s)
|
41 |
| CseI |
GACGC |
1 cut(s)
|
6 |
| Csp6I |
GTAC |
1 cut(s)
|
76 |
| CviQI |
GTAC |
1 cut(s)
|
76 |
| DdeI |
CTNAG |
1 cut(s)
|
112 |
| Eco47III |
AGCGCT |
1 cut(s)
|
40 |
| FaiI |
YATR |
2 cut(s)
|
31, 150 |
| Fnu4HI |
GCNGC |
1 cut(s)
|
42 |
| Fsp4HI |
GCNGC |
1 cut(s)
|
42 |
| FspBI |
CTAG |
2 cut(s)
|
45, 98 |
| FspEI |
CC |
7 cut(s)
|
39, 42, 47, 48, 97, 152, 155 |
| GlaI |
GCGC |
1 cut(s)
|
40 |
| GluI |
GCNGC |
1 cut(s)
|
42 |
| HaeII |
RGCGCY |
1 cut(s)
|
42 |
| HgaI |
GACGC |
1 cut(s)
|
6 |
| HhaI |
GCGC |
1 cut(s)
|
41 |
| Hin6I |
GCGC |
1 cut(s)
|
39 |
| HinP1I |
GCGC |
1 cut(s)
|
39 |
| HincII |
GTYRAC |
1 cut(s)
|
21 |
| HindII |
GTYRAC |
1 cut(s)
|
21 |
| HinfI |
GANTC |
3 cut(s)
|
48, 56, 188 |
| Hpy166II |
GTNNAC |
2 cut(s)
|
21, 78 |
| Hpy188I |
TCNGA |
2 cut(s)
|
55, 115 |
| Hpy188III |
TCNNGA |
2 cut(s)
|
98, 131 |
| Hpy8I |
GTNNAC |
2 cut(s)
|
21, 78 |
| HpyCH4V |
TGCA |
1 cut(s)
|
159 |
| HpyF3I |
CTNAG |
1 cut(s)
|
112 |
| HspAI |
GCGC |
1 cut(s)
|
39 |
| Lsp1109I |
GCAGC |
1 cut(s)
|
28 |
| LweI |
GCATC |
1 cut(s)
|
14 |
| MaeI |
CTAG |
2 cut(s)
|
45, 98 |
| MnlI |
CCTC |
3 cut(s)
|
36, 94, 163 |
| MseI |
TTAA |
1 cut(s)
|
193 |
| Mva1269I |
GAATGC |
1 cut(s)
|
161 |
| PctI |
GAATGC |
1 cut(s)
|
161 |
| PfeI |
GAWTC |
3 cut(s)
|
48, 56, 188 |
| PkrI |
GCNGC |
1 cut(s)
|
43 |
| PsiI |
TTATAA |
1 cut(s)
|
150 |
| RsaI |
GTAC |
1 cut(s)
|
77 |
| RsaNI |
GTAC |
1 cut(s)
|
76 |
| SaqAI |
TTAA |
1 cut(s)
|
193 |
| SatI |
GCNGC |
1 cut(s)
|
42 |
| SetI |
ASST |
2 cut(s)
|
28, 174 |
| SfaNI |
GCATC |
1 cut(s)
|
14 |
| SgeI |
CNNG |
7 cut(s)
|
24, 48, 57, 110, 130, 143, 172 |
| SspMI |
CTAG |
2 cut(s)
|
45, 98 |
| TaqI |
TCGA |
1 cut(s)
|
11 |
| TatI |
WGTACW |
1 cut(s)
|
75 |
| TfiI |
GAWTC |
3 cut(s)
|
48, 56, 188 |
| Tru1I |
TTAA |
1 cut(s)
|
193 |
| Tru9I |
TTAA |
1 cut(s)
|
193 |
| TscAI |
CASTG |
1 cut(s)
|
85 |
| TseI |
GCWGC |
1 cut(s)
|
41 |
| TspRI |
CASTG |
1 cut(s)
|
85 |
| XbaI |
TCTAGA |
1 cut(s)
|
97 |
| XspI |
CTAG |
2 cut(s)
|
45, 98 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.