Rmu_sc0010698.1_g000011

cyclin-dependent protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010698.1
OG0016859
Physical Location & Seq
Reverse (-)
46828 .. 47397
570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010698.1_g000011.1.cds

Sequence Viewer

Length: 570 bp
atgaagaggtacacgttcgccgaggagctcagggccggaaaatgctgccgtttggtggccgcacttgacaagactaccgatcgcgccgtcatcgtcgccgcctacaacgacgacgggatcctcgaaggctacaaagagatcgaaatcctgcgagcgcttgctgagtgttctttcgtggtcaatctagtgggccacgaggtggatgatttcgaagctcgctcgacgtggcgtgatgctaagaaggcctcaaccgtttccgtcgtgtacgagcattgcgatactgacctgaccatgtataggatggcttctcctcgccgccatctccccgtcgaaaaggtgaagagcttgttttttcagctctccacgggccttcatgccgcccactccaaagggatctttctccgagacctccgcccagagaagatccgggttttggagaacccttttcgagtgaagctctccgacttcattggggccaagatgcttcacccaatggcccccgattcggatttggtcacacctcccggcgcgttggagcgcaacctgagctatcaggccctgagcagctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000082 GO:0000086 GO:0000278 GO:0000307 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006325 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009653 GO:0009719 GO:0009725 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009888 GO:0009889 GO:0009934 GO:0009987 GO:0010016 GO:0010033 GO:0010103 GO:0010154 GO:0010374 GO:0010376 GO:0010389 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010564 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022414 GO:0022603 GO:0023052 GO:0030154 GO:0030332 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032875 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0040007 GO:0042023 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044839 GO:0044843 GO:0046483 GO:0046777 GO:0048316 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051239 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060560 GO:0061458 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097472 GO:0099402 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902806 GO:1902911 GO:1903047 GO:1990234 GO:2000026 GO:2000037 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko04068 ko04110 ko04114 ko04115 ko04151 ko04218 ko04540 ko04914 ko04934 ko05161 ko05162 ko05165 ko05168 ko05169 ko05200 ko05203 ko05215 ko05222 ko05226 map04068 map04110 map04114 map04115 map04151 map04218 map04540 map04914 map04934 map05161 map05162 map05165 map05168 map05169 map05200 map05203 map05215 map05222 map05226
Pfam Domains
Protein Families
Pkinase

Protein Analysis

189

Amino Acids

21.3

Weight (kDa)

7.71

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 199
AccII CGCG 2 cut(s) 84, 530
AciI CCGC 5 cut(s) 60, 99, 316, 378, 412
AclWI GGATC 4 cut(s) 112, 125, 401, 418
AcoI YGGCCR 1 cut(s) 57
AdeI CACNNNGTG 1 cut(s) 199
AfaI GTAC 2 cut(s) 11, 266
AfeI AGCGCT 1 cut(s) 156
AfiI CCNNNNNNNGG 5 cut(s) 55, 199, 297, 433, 505
AflIII ACRYGT 1 cut(s) 12
AjiI CACGTC 1 cut(s) 225
AluBI AGCT 7 cut(s) 28, 215, 345, 358, 457, 549, 567
AluI AGCT 7 cut(s) 28, 215, 345, 358, 457, 549, 567
Alw21I GWGCWC 1 cut(s) 30
Alw26I GTCTC 1 cut(s) 399
AlwI GGATC 4 cut(s) 112, 125, 401, 418
AlwNI CAGNNNCTG 1 cut(s) 559
Aor51HI AGCGCT 1 cut(s) 156
AoxI GGCC 8 cut(s) 33, 57, 190, 243, 367, 474, 495, 555
ApeKI GCWGC 2 cut(s) 45, 564
AspLEI GCGC 4 cut(s) 86, 157, 530, 540
AspS9I GGNCC 6 cut(s) 33, 190, 367, 474, 496, 556
AsuC2I CCSGG 2 cut(s) 428, 525
AsuHPI GGTGA 2 cut(s) 349, 479
AsuII TTCGAA 1 cut(s) 210
BamHI GGATCC 1 cut(s) 117
BanII GRGCYC 1 cut(s) 30
BauI CACGAG 1 cut(s) 194
Bbv12I GWGCWC 1 cut(s) 30
BbvI GCAGC 1 cut(s) 32
BccI CCATC 2 cut(s) 295, 327
BceAI ACGGC 2 cut(s) 33, 71
BcnI CCSGG 2 cut(s) 428, 525
BcoDI GTCTC 1 cut(s) 399
BfaI CTAG 1 cut(s) 185
BfoI RGCGCY 1 cut(s) 158
BisI GCNGC 6 cut(s) 46, 60, 99, 316, 378, 565
BlsI GCNGC 6 cut(s) 47, 61, 100, 317, 379, 566
Bme1390I CCNGG 2 cut(s) 428, 525
BmgBI CACGTC 1 cut(s) 225
BmgT120I GGNCC 6 cut(s) 33, 190, 367, 474, 496, 556
BmiI GGNNCC 3 cut(s) 119, 475, 498
BmrFI CCNGG 2 cut(s) 428, 525
BmsI GCATC 2 cut(s) 223, 471
BplI GAGNNNNNCTC 2 cut(s) 441, 473
Bpu10I CCTNAGC 3 cut(s) 29, 545, 560
Bpu14I TTCGAA 1 cut(s) 210
BpuMI CCSGG 2 cut(s) 428, 525
BsaBI GATNNNNATC 1 cut(s) 143
BsaI GGTCTC 1 cut(s) 399
BsaJI CCNNGG 2 cut(s) 21, 363
Bsc4I CCNNNNNNNGG 5 cut(s) 55, 199, 297, 433, 505
Bse3DI GCAATG 1 cut(s) 271
Bse8I GATNNNNATC 1 cut(s) 143
BseDI CCNNGG 2 cut(s) 21, 363
BseGI GGATG 2 cut(s) 208, 306
BseJI GATNNNNATC 1 cut(s) 143
BseLI CCNNNNNNNGG 5 cut(s) 55, 199, 297, 433, 505
BseMI GCAATG 1 cut(s) 271
BseMII CTCAG 4 cut(s) 43, 153, 536, 551
BseRI GAGGAG 2 cut(s) 38, 300
BseXI GCAGC 1 cut(s) 32
Bsh1236I CGCG 2 cut(s) 84, 530
Bsh1285I CGRYCG 1 cut(s) 82
BshFI GGCC 8 cut(s) 35, 59, 192, 245, 369, 476, 497, 557
BsiEI CGRYCG 1 cut(s) 82
BsiHKAI GWGCWC 1 cut(s) 30
BsiSI CCGG 3 cut(s) 36, 427, 525
BslI CCNNNNNNNGG 5 cut(s) 55, 199, 297, 433, 505
BsmAI GTCTC 1 cut(s) 399
BsnI GGCC 8 cut(s) 35, 59, 192, 245, 369, 476, 497, 557
Bso31I GGTCTC 1 cut(s) 399
Bsp119I TTCGAA 1 cut(s) 210
Bsp1286I GDGCHC 1 cut(s) 30
Bsp143I GATC 5 cut(s) 79, 117, 138, 393, 423
BspACI CCGC 5 cut(s) 60, 99, 316, 378, 412
BspANI GGCC 8 cut(s) 35, 59, 192, 245, 369, 476, 497, 557
BspCNI CTCAG 4 cut(s) 42, 154, 537, 552
BspFNI CGCG 2 cut(s) 84, 530
BspLI GGNNCC 3 cut(s) 119, 475, 498
BspPI GGATC 4 cut(s) 112, 125, 401, 418
BspQI GCTCTTC 1 cut(s) 335
BspT104I TTCGAA 1 cut(s) 210
BspTNI GGTCTC 1 cut(s) 399
BsrDI GCAATG 1 cut(s) 271
BssECI CCNNGG 2 cut(s) 21, 363
BssMI GATC 5 cut(s) 79, 117, 138, 393, 423
BssSI CACGAG 1 cut(s) 194
Bst2BI CACGAG 1 cut(s) 194
Bst4CI ACNGT 1 cut(s) 253
Bst6I CTCTTC 1 cut(s) 335
BstBI TTCGAA 1 cut(s) 210
BstC8I GCNNGC 3 cut(s) 153, 159, 217
BstDEI CTNAG 5 cut(s) 29, 162, 237, 545, 560
BstDSI CCRYGG 1 cut(s) 363
BstF5I GGATG 2 cut(s) 208, 306
BstFNI CGCG 2 cut(s) 84, 530
BstH2I RGCGCY 1 cut(s) 158
BstHHI GCGC 4 cut(s) 86, 157, 530, 540
BstKTI GATC 5 cut(s) 82, 120, 141, 396, 426
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 5 cut(s) 79, 117, 138, 393, 423
BstMCI CGRYCG 1 cut(s) 82
BstMWI GCNNNNNNNGC 2 cut(s) 242, 546
BstSCI CCNGG 2 cut(s) 426, 523
BstUI CGCG 2 cut(s) 84, 530
BstV1I GCAGC 1 cut(s) 32
BstX2I RGATCY 3 cut(s) 117, 393, 423
BstYI RGATCY 3 cut(s) 117, 393, 423
BsuRI GGCC 8 cut(s) 35, 59, 192, 245, 369, 476, 497, 557
BtgI CCRYGG 1 cut(s) 363
BtrI CACGTC 1 cut(s) 225
BtsCI GGATG 2 cut(s) 208, 306
Cac8I GCNNGC 3 cut(s) 153, 159, 217
CaiI CAGNNNCTG 1 cut(s) 559
CfoI GCGC 4 cut(s) 86, 157, 530, 540
Cfr13I GGNCC 6 cut(s) 33, 190, 367, 474, 496, 556
Csp6I GTAC 2 cut(s) 10, 265
CviAII CATG 2 cut(s) 292, 374
CviQI GTAC 2 cut(s) 10, 265
DdeI CTNAG 5 cut(s) 29, 162, 237, 545, 560
DpnI GATC 5 cut(s) 81, 119, 140, 395, 425
DpnII GATC 5 cut(s) 79, 117, 138, 393, 423
DraIII CACNNNGTG 1 cut(s) 199
EaeI YGGCCR 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 335
EarI CTCTTC 1 cut(s) 335
EciI GGCGGA 1 cut(s) 401
Ecl136II GAGCTC 1 cut(s) 28
Eco147I AGGCCT 1 cut(s) 245
Eco24I GRGCYC 1 cut(s) 30
Eco31I GGTCTC 1 cut(s) 399
Eco47III AGCGCT 1 cut(s) 156
Eco53kI GAGCTC 1 cut(s) 28
EcoICRI GAGCTC 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 556
EcoT38I GRGCYC 1 cut(s) 30
FaeI CATG 2 cut(s) 295, 377
FaiI YATR 3 cut(s) 293, 297, 375
FatI CATG 2 cut(s) 291, 373
Fnu4HI GCNGC 6 cut(s) 46, 60, 99, 316, 378, 565
FokI GGATG 2 cut(s) 215, 313
FriOI GRGCYC 1 cut(s) 30
Fsp4HI GCNGC 6 cut(s) 46, 60, 99, 316, 378, 565
FspBI CTAG 1 cut(s) 185
GlaI GCGC 4 cut(s) 85, 156, 529, 539
GluI GCNGC 6 cut(s) 46, 60, 99, 316, 378, 565
HaeII RGCGCY 1 cut(s) 158
HaeIII GGCC 8 cut(s) 35, 59, 192, 245, 369, 476, 497, 557
HapII CCGG 3 cut(s) 36, 427, 525
HhaI GCGC 4 cut(s) 86, 157, 530, 540
Hin1II CATG 2 cut(s) 295, 377
Hin6I GCGC 4 cut(s) 84, 155, 528, 538
HinP1I GCGC 4 cut(s) 84, 155, 528, 538
HinfI GANTC 1 cut(s) 503
HpaII CCGG 3 cut(s) 36, 427, 525
HphI GGTGA 2 cut(s) 349, 479
Hpy166II GTNNAC 2 cut(s) 12, 265
Hpy188I TCNGA 3 cut(s) 404, 463, 508
Hpy8I GTNNAC 2 cut(s) 12, 265
Hpy99I CGWCG 6 cut(s) 98, 113, 116, 226, 263, 332
HpyAV CCTTC 3 cut(s) 119, 235, 380
HpyCH4III ACNGT 1 cut(s) 253
HpyCH4IV ACGT 2 cut(s) 14, 224
HpyF10VI GCNNNNNNNGC 2 cut(s) 242, 546
HpyF3I CTNAG 5 cut(s) 29, 162, 237, 545, 560
HpySE526I ACGT 2 cut(s) 14, 224
Hsp92II CATG 2 cut(s) 295, 377
HspAI GCGC 4 cut(s) 84, 155, 528, 538
Kzo9I GATC 5 cut(s) 79, 117, 138, 393, 423
LguI GCTCTTC 1 cut(s) 335
LmnI GCTCC 2 cut(s) 25, 535
LpnPI CCDG 9 cut(s) 16, 49, 161, 299, 429, 440, 538, 539, 557
Lsp1109I GCAGC 1 cut(s) 32
LweI GCATC 2 cut(s) 223, 471
MaeI CTAG 1 cut(s) 185
MaeII ACGT 2 cut(s) 14, 224
MaeIII GTNAC 1 cut(s) 514
MalI GATC 5 cut(s) 81, 119, 140, 395, 425
MboI GATC 5 cut(s) 79, 117, 138, 393, 423
MboII GAAGA 3 cut(s) 16, 352, 433
MflI RGATCY 3 cut(s) 117, 393, 423
MhlI GDGCHC 1 cut(s) 30
MmeI TCCRAC 2 cut(s) 486, 513
MnlI CCTC 7 cut(s) 16, 131, 190, 256, 321, 419, 531
MspI CCGG 3 cut(s) 36, 427, 525
MspR9I CCNGG 2 cut(s) 428, 525
MvnI CGCG 2 cut(s) 84, 530
MwoI GCNNNNNNNGC 2 cut(s) 242, 546
NciI CCSGG 2 cut(s) 428, 525
NdeII GATC 5 cut(s) 79, 117, 138, 393, 423
NlaIII CATG 2 cut(s) 295, 377
NlaIV GGNNCC 3 cut(s) 119, 475, 498
NmeAIII GCCGAG 1 cut(s) 46
NmuCI GTSAC 1 cut(s) 514
NspV TTCGAA 1 cut(s) 210
PceI AGGCCT 1 cut(s) 245
PciSI GCTCTTC 1 cut(s) 335
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 273
PfeI GAWTC 1 cut(s) 503
PflMI CCANNNNNTGG 1 cut(s) 199
PkrI GCNGC 6 cut(s) 47, 61, 100, 317, 379, 566
Ple19I CGATCG 1 cut(s) 82
Psp124BI GAGCTC 1 cut(s) 30
PspN4I GGNNCC 3 cut(s) 119, 475, 498
PspPI GGNCC 6 cut(s) 33, 190, 367, 474, 496, 556
PstNI CAGNNNCTG 1 cut(s) 559
PsuI RGATCY 3 cut(s) 117, 393, 423
PvuI CGATCG 1 cut(s) 82
RsaI GTAC 2 cut(s) 11, 266
RsaNI GTAC 2 cut(s) 10, 265
SacI GAGCTC 1 cut(s) 30
SapI GCTCTTC 1 cut(s) 335
SatI GCNGC 6 cut(s) 46, 60, 99, 316, 378, 565
Sau3AI GATC 5 cut(s) 79, 117, 138, 393, 423
Sau96I GGNCC 6 cut(s) 33, 190, 367, 474, 496, 556
ScrFI CCNGG 2 cut(s) 428, 525
SduI GDGCHC 1 cut(s) 30
SfaNI GCATC 2 cut(s) 223, 471
SfuI TTCGAA 1 cut(s) 210
SseBI AGGCCT 1 cut(s) 245
SsiI CCGC 5 cut(s) 60, 99, 316, 378, 412
SspMI CTAG 1 cut(s) 185
SstI GAGCTC 1 cut(s) 30
StuI AGGCCT 1 cut(s) 245
StyD4I CCNGG 2 cut(s) 426, 523
TaaI ACNGT 1 cut(s) 253
TaiI ACGT 2 cut(s) 17, 227
TaqI TCGA 6 cut(s) 123, 141, 210, 221, 330, 448
TauI GCSGC 4 cut(s) 62, 101, 318, 380
TfiI GAWTC 1 cut(s) 503
TseFI GTSAC 1 cut(s) 514
TseI GCWGC 2 cut(s) 45, 564
Tsp45I GTSAC 1 cut(s) 514
TspDTI ATGAA 3 cut(s) 17, 362, 457
TspGWI ACGGA 1 cut(s) 247
Van91I CCANNNNNTGG 1 cut(s) 199
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.