Rh2BG023200

cyclin-dependent protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0016859
Physical Location & Seq
Forward (+)
1568649 .. 1569293
645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG023200.1

Sequence Viewer

Length: 645 bp
ATGAAGAGGTACACGTTCGCCGAGGACCTGATGAGAACCTGGAAATGCCGCCGTTTGGTGGCCGCACTTGACAAGACGACCAATCGCGCCGTCATCGTCGCCGCCTACAACGACGGGATCCTGGAAGGCTACAAAGAGATCGAAATCCTGCGAGCGCTTGCTGAGTGTCCTTTCGTGGTCAATCTAGTGGGCCACGAGGTGGATGATTTCGAAGCTCGCTCGACGTGGCGTGATCCTCAGGCCTCAACCGTTTCCATCGTGTACGAGCACTGTGATACTGATCTCAGCAGGTACCGGAAGGCTCTCCAAGGCCATCATCTCCCCGCCCGGATGGTGAAGAGCTTGTTTTACCAGCTCTCCACGGGCCTTCATGCCGCCCACTCCAAAGGGATCTTTCTCCGAGACCTCCGGCCTGAGAAGATTCGGGTTTTGGACAACCCTTTTCGAGTGAAGCTCTCCGACTTCATTGGGGCCAAGATGCTTCACCCAATGGCCCGCGATTCGGATTTTATCACACCTCCCGGCGCGTTGGAGCGCAACCTGAGCTATCAGGCCCCTGAGCAGCTAATTGGGTCAGAGATGTACACCTCTGCGGTGGACATGTGGGCACTGGCTTGCATTGTGGGTAAATCACTGATCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000082 GO:0000086 GO:0000278 GO:0000307 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006325 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009653 GO:0009719 GO:0009725 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009888 GO:0009889 GO:0009934 GO:0009987 GO:0010016 GO:0010033 GO:0010103 GO:0010154 GO:0010374 GO:0010376 GO:0010389 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010564 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022414 GO:0022603 GO:0023052 GO:0030154 GO:0030332 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032875 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0040007 GO:0042023 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044839 GO:0044843 GO:0046483 GO:0046777 GO:0048316 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051239 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060560 GO:0061458 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097472 GO:0099402 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902806 GO:1902911 GO:1903047 GO:1990234 GO:2000026 GO:2000037 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko04068 ko04110 ko04114 ko04115 ko04151 ko04218 ko04540 ko04914 ko04934 ko05161 ko05162 ko05165 ko05168 ko05169 ko05200 ko05203 ko05215 ko05222 ko05226 map04068 map04110 map04114 map04115 map04151 map04218 map04540 map04914 map04934 map05161 map05162 map05165 map05168 map05169 map05200 map05203 map05215 map05222 map05226
Pfam Domains
Protein Families
Pkinase

Protein Analysis

214

Amino Acids

24.36

Weight (kDa)

8.32

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 44 - 209 2.2e-19 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 279
Acc65I GGTACC 1 cut(s) 291
AccB1I GGYRCC 1 cut(s) 291
AccB7I CCANNNNNTGG 1 cut(s) 199
AccII CGCG 3 cut(s) 87, 498, 527
AciI CCGC 7 cut(s) 49, 63, 102, 324, 375, 496, 593
AclWI GGATC 4 cut(s) 112, 125, 227, 398
AcoI YGGCCR 1 cut(s) 60
AdeI CACNNNGTG 1 cut(s) 199
AfaI GTAC 4 cut(s) 11, 263, 293, 584
AfeI AGCGCT 1 cut(s) 156
AfiI CCNNNNNNNGG 4 cut(s) 55, 58, 199, 502
AflIII ACRYGT 2 cut(s) 12, 600
AjiI CACGTC 1 cut(s) 225
AjnI CCWGG 2 cut(s) 38, 120
AluBI AGCT 6 cut(s) 215, 342, 355, 454, 546, 565
AluI AGCT 6 cut(s) 215, 342, 355, 454, 546, 565
Alw21I GWGCWC 1 cut(s) 270
Alw26I GTCTC 1 cut(s) 396
AlwI GGATC 4 cut(s) 112, 125, 227, 398
Aor51HI AGCGCT 1 cut(s) 156
AoxI GGCC 9 cut(s) 60, 190, 240, 310, 364, 410, 471, 492, 552
ApeKI GCWGC 1 cut(s) 562
Asp718I GGTACC 1 cut(s) 291
AspLEI GCGC 4 cut(s) 89, 157, 527, 537
AspS9I GGNCC 6 cut(s) 25, 190, 364, 471, 493, 553
AsuC2I CCSGG 2 cut(s) 328, 522
AsuHPI GGTGA 2 cut(s) 346, 476
AsuII TTCGAA 1 cut(s) 210
AvaII GGWCC 1 cut(s) 25
AxyI CCTNAGG 1 cut(s) 237
BaeGI GKGCMC 1 cut(s) 610
BamHI GGATCC 1 cut(s) 117
BanI GGYRCC 1 cut(s) 291
BauI CACGAG 1 cut(s) 194
Bbv12I GWGCWC 1 cut(s) 270
BbvI GCAGC 1 cut(s) 574
BccI CCATC 3 cut(s) 263, 321, 325
BceAI ACGGC 2 cut(s) 36, 74
BciT130I CCWGG 2 cut(s) 40, 122
BcnI CCSGG 2 cut(s) 328, 522
BcoDI GTCTC 1 cut(s) 396
BfaI CTAG 2 cut(s) 185, 643
BfoI RGCGCY 1 cut(s) 158
BfuAI ACCTGC 1 cut(s) 279
BisI GCNGC 5 cut(s) 49, 63, 102, 375, 563
BlsI GCNGC 5 cut(s) 50, 64, 103, 376, 564
Bme1390I CCNGG 4 cut(s) 40, 122, 328, 522
Bme18I GGWCC 1 cut(s) 25
BmgBI CACGTC 1 cut(s) 225
BmgT120I GGNCC 6 cut(s) 25, 190, 364, 471, 493, 553
BmiI GGNNCC 4 cut(s) 119, 293, 472, 555
BmrFI CCNGG 4 cut(s) 40, 122, 328, 522
BmsI GCATC 1 cut(s) 468
BplI GAGNNNNNCTC 2 cut(s) 438, 470
Bpu10I CCTNAGC 2 cut(s) 542, 558
Bpu14I TTCGAA 1 cut(s) 210
BpuMI CCSGG 2 cut(s) 328, 522
BsaBI GATNNNNATC 2 cut(s) 143, 279
BsaI GGTCTC 1 cut(s) 396
BsaJI CCNNGG 3 cut(s) 21, 307, 360
BsaWI WCCGGW 1 cut(s) 294
BsaXI ACNNNNNCTCC 2 cut(s) 341, 371
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 58, 199, 502
Bse1I ACTGG 1 cut(s) 615
Bse21I CCTNAGG 1 cut(s) 237
Bse8I GATNNNNATC 2 cut(s) 143, 279
BseBI CCWGG 2 cut(s) 40, 122
BseDI CCNNGG 3 cut(s) 21, 307, 360
BseGI GGATG 2 cut(s) 208, 336
BseJI GATNNNNATC 2 cut(s) 143, 279
BseLI CCNNNNNNNGG 4 cut(s) 55, 58, 199, 502
BseMII CTCAG 6 cut(s) 153, 251, 298, 405, 533, 549
BseNI ACTGG 1 cut(s) 615
BseSI GKGCMC 1 cut(s) 610
BseXI GCAGC 1 cut(s) 574
Bsh1236I CGCG 3 cut(s) 87, 498, 527
BshFI GGCC 9 cut(s) 62, 192, 242, 312, 366, 412, 473, 494, 554
BshNI GGYRCC 1 cut(s) 291
BsiHKAI GWGCWC 1 cut(s) 270
BsiSI CCGG 4 cut(s) 295, 328, 409, 522
BslI CCNNNNNNNGG 4 cut(s) 55, 58, 199, 502
BsmAI GTCTC 1 cut(s) 396
BsnI GGCC 9 cut(s) 62, 192, 242, 312, 366, 412, 473, 494, 554
Bso31I GGTCTC 1 cut(s) 396
Bsp119I TTCGAA 1 cut(s) 210
Bsp1286I GDGCHC 2 cut(s) 270, 610
Bsp1407I TGTACA 1 cut(s) 582
Bsp143I GATC 6 cut(s) 117, 138, 232, 280, 390, 636
BspACI CCGC 7 cut(s) 49, 63, 102, 324, 375, 496, 593
BspANI GGCC 9 cut(s) 62, 192, 242, 312, 366, 412, 473, 494, 554
BspCNI CTCAG 6 cut(s) 154, 250, 297, 406, 534, 550
BspFNI CGCG 3 cut(s) 87, 498, 527
BspLI GGNNCC 4 cut(s) 119, 293, 472, 555
BspMI ACCTGC 1 cut(s) 279
BspPI GGATC 4 cut(s) 112, 125, 227, 398
BspQI GCTCTTC 1 cut(s) 332
BspT104I TTCGAA 1 cut(s) 210
BspT107I GGYRCC 1 cut(s) 291
BspTNI GGTCTC 1 cut(s) 396
BsrGI TGTACA 1 cut(s) 582
BsrI ACTGG 1 cut(s) 615
BssECI CCNNGG 3 cut(s) 21, 307, 360
BssMI GATC 6 cut(s) 117, 138, 232, 280, 390, 636
BssSI CACGAG 1 cut(s) 194
BssT1I CCWWGG 1 cut(s) 307
Bst2BI CACGAG 1 cut(s) 194
Bst2UI CCWGG 2 cut(s) 40, 122
Bst4CI ACNGT 2 cut(s) 250, 272
Bst6I CTCTTC 1 cut(s) 332
BstAUI TGTACA 1 cut(s) 582
BstBI TTCGAA 1 cut(s) 210
BstC8I GCNNGC 5 cut(s) 153, 159, 217, 496, 616
BstDEI CTNAG 6 cut(s) 162, 237, 284, 414, 542, 558
BstDSI CCRYGG 1 cut(s) 360
BstF5I GGATG 2 cut(s) 208, 336
BstFNI CGCG 3 cut(s) 87, 498, 527
BstH2I RGCGCY 1 cut(s) 158
BstHHI GCGC 4 cut(s) 89, 157, 527, 537
BstKTI GATC 6 cut(s) 120, 141, 235, 283, 393, 639
BstMAI GTCTC 1 cut(s) 396
BstMBI GATC 6 cut(s) 117, 138, 232, 280, 390, 636
BstMWI GCNNNNNNNGC 1 cut(s) 543
BstNI CCWGG 2 cut(s) 40, 122
BstNSI RCATGY 1 cut(s) 604
BstSCI CCNGG 4 cut(s) 38, 120, 326, 520
BstSLI GKGCMC 1 cut(s) 610
BstUI CGCG 3 cut(s) 87, 498, 527
BstV1I GCAGC 1 cut(s) 574
BstX2I RGATCY 2 cut(s) 117, 390
BstYI RGATCY 2 cut(s) 117, 390
Bsu36I CCTNAGG 1 cut(s) 237
BsuRI GGCC 9 cut(s) 62, 192, 242, 312, 366, 412, 473, 494, 554
BtgI CCRYGG 1 cut(s) 360
BtrI CACGTC 1 cut(s) 225
BtsCI GGATG 2 cut(s) 208, 336
BtsIMutI CAGTG 3 cut(s) 268, 608, 632
BveI ACCTGC 1 cut(s) 279
Cac8I GCNNGC 5 cut(s) 153, 159, 217, 496, 616
CfoI GCGC 4 cut(s) 89, 157, 527, 537
Cfr13I GGNCC 6 cut(s) 25, 190, 364, 471, 493, 553
Csp6I GTAC 4 cut(s) 10, 262, 292, 583
CviAII CATG 2 cut(s) 371, 601
CviQI GTAC 4 cut(s) 10, 262, 292, 583
DdeI CTNAG 6 cut(s) 162, 237, 284, 414, 542, 558
DpnI GATC 6 cut(s) 119, 140, 234, 282, 392, 638
DpnII GATC 6 cut(s) 117, 138, 232, 280, 390, 636
DraIII CACNNNGTG 1 cut(s) 199
EaeI YGGCCR 1 cut(s) 60
Eam1104I CTCTTC 1 cut(s) 332
EarI CTCTTC 1 cut(s) 332
Eco130I CCWWGG 1 cut(s) 307
Eco147I AGGCCT 1 cut(s) 242
Eco31I GGTCTC 1 cut(s) 396
Eco47I GGWCC 1 cut(s) 25
Eco47III AGCGCT 1 cut(s) 156
Eco81I CCTNAGG 1 cut(s) 237
EcoO109I RGGNCCY 2 cut(s) 25, 553
EcoRII CCWGG 2 cut(s) 38, 120
EcoT14I CCWWGG 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 307
FaeI CATG 2 cut(s) 374, 604
FaiI YATR 2 cut(s) 372, 602
FatI CATG 2 cut(s) 370, 600
FauI CCCGC 2 cut(s) 331, 503
Fnu4HI GCNGC 5 cut(s) 49, 63, 102, 375, 563
FokI GGATG 2 cut(s) 215, 343
Fsp4HI GCNGC 5 cut(s) 49, 63, 102, 375, 563
FspBI CTAG 2 cut(s) 185, 643
GlaI GCGC 4 cut(s) 88, 156, 526, 536
GluI GCNGC 5 cut(s) 49, 63, 102, 375, 563
HaeII RGCGCY 1 cut(s) 158
HaeIII GGCC 9 cut(s) 62, 192, 242, 312, 366, 412, 473, 494, 554
HapII CCGG 4 cut(s) 295, 328, 409, 522
HhaI GCGC 4 cut(s) 89, 157, 527, 537
Hin1II CATG 2 cut(s) 374, 604
Hin6I GCGC 4 cut(s) 87, 155, 525, 535
HinP1I GCGC 4 cut(s) 87, 155, 525, 535
HinfI GANTC 2 cut(s) 421, 500
HpaII CCGG 4 cut(s) 295, 328, 409, 522
HphI GGTGA 2 cut(s) 346, 476
Hpy166II GTNNAC 4 cut(s) 12, 262, 585, 598
Hpy188I TCNGA 4 cut(s) 401, 460, 505, 577
Hpy8I GTNNAC 4 cut(s) 12, 262, 585, 598
Hpy99I CGWCG 3 cut(s) 101, 116, 226
HpyAV CCTTC 3 cut(s) 119, 292, 377
HpyCH4III ACNGT 2 cut(s) 250, 272
HpyCH4IV ACGT 2 cut(s) 14, 224
HpyCH4V TGCA 1 cut(s) 618
HpyF10VI GCNNNNNNNGC 1 cut(s) 543
HpyF3I CTNAG 6 cut(s) 162, 237, 284, 414, 542, 558
HpySE526I ACGT 2 cut(s) 14, 224
Hsp92II CATG 2 cut(s) 374, 604
HspAI GCGC 4 cut(s) 87, 155, 525, 535
KpnI GGTACC 1 cut(s) 295
Kzo9I GATC 6 cut(s) 117, 138, 232, 280, 390, 636
LguI GCTCTTC 1 cut(s) 332
LmnI GCTCC 1 cut(s) 532
Lsp1109I GCAGC 1 cut(s) 574
LweI GCATC 1 cut(s) 468
MaeI CTAG 2 cut(s) 185, 643
MaeII ACGT 2 cut(s) 14, 224
MalI GATC 6 cut(s) 119, 140, 234, 282, 392, 638
MboI GATC 6 cut(s) 117, 138, 232, 280, 390, 636
MboII GAAGA 4 cut(s) 16, 349, 430, 631
MflI RGATCY 2 cut(s) 117, 390
MhlI GDGCHC 2 cut(s) 270, 610
MluCI AATT 1 cut(s) 567
MmeI TCCRAC 2 cut(s) 483, 510
MnlI CCTC 7 cut(s) 16, 190, 246, 253, 416, 528, 598
MspI CCGG 4 cut(s) 295, 328, 409, 522
MspR9I CCNGG 4 cut(s) 40, 122, 328, 522
MvaI CCWGG 2 cut(s) 40, 122
MvnI CGCG 3 cut(s) 87, 498, 527
MwoI GCNNNNNNNGC 1 cut(s) 543
NciI CCSGG 2 cut(s) 328, 522
NdeII GATC 6 cut(s) 117, 138, 232, 280, 390, 636
NlaIII CATG 2 cut(s) 374, 604
NlaIV GGNNCC 4 cut(s) 119, 293, 472, 555
NmeAIII GCCGAG 1 cut(s) 46
NspI RCATGY 1 cut(s) 604
NspV TTCGAA 1 cut(s) 210
PceI AGGCCT 1 cut(s) 242
PciI ACATGT 1 cut(s) 600
PciSI GCTCTTC 1 cut(s) 332
PfeI GAWTC 2 cut(s) 421, 500
PflMI CCANNNNNTGG 1 cut(s) 199
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 5 cut(s) 50, 64, 103, 376, 564
PpuMI RGGWCCY 1 cut(s) 25
PscI ACATGT 1 cut(s) 600
Psp5II RGGWCCY 1 cut(s) 25
Psp6I CCWGG 2 cut(s) 38, 120
PspGI CCWGG 2 cut(s) 38, 120
PspN4I GGNNCC 4 cut(s) 119, 293, 472, 555
PspPI GGNCC 6 cut(s) 25, 190, 364, 471, 493, 553
PspPPI RGGWCCY 1 cut(s) 25
PsuI RGATCY 2 cut(s) 117, 390
RsaI GTAC 4 cut(s) 11, 263, 293, 584
RsaNI GTAC 4 cut(s) 10, 262, 292, 583
SapI GCTCTTC 1 cut(s) 332
SatI GCNGC 5 cut(s) 49, 63, 102, 375, 563
Sau3AI GATC 6 cut(s) 117, 138, 232, 280, 390, 636
Sau96I GGNCC 6 cut(s) 25, 190, 364, 471, 493, 553
ScrFI CCNGG 4 cut(s) 40, 122, 328, 522
SduI GDGCHC 2 cut(s) 270, 610
SfaNI GCATC 1 cut(s) 468
SfuI TTCGAA 1 cut(s) 210
SinI GGWCC 1 cut(s) 25
Sse9I AATT 1 cut(s) 567
SseBI AGGCCT 1 cut(s) 242
SsiI CCGC 7 cut(s) 49, 63, 102, 324, 375, 496, 593
SspMI CTAG 2 cut(s) 185, 643
StuI AGGCCT 1 cut(s) 242
StyD4I CCNGG 4 cut(s) 38, 120, 326, 520
StyI CCWWGG 1 cut(s) 307
TaaI ACNGT 2 cut(s) 250, 272
TaiI ACGT 2 cut(s) 17, 227
TaqI TCGA 4 cut(s) 141, 210, 221, 445
TasI AATT 1 cut(s) 567
TatI WGTACW 1 cut(s) 582
TauI GCSGC 4 cut(s) 51, 65, 104, 377
TfiI GAWTC 2 cut(s) 421, 500
TscAI CASTG 3 cut(s) 275, 615, 639
TseI GCWGC 1 cut(s) 562
TspDTI ATGAA 3 cut(s) 17, 359, 454
TspRI CASTG 3 cut(s) 275, 615, 639
Van91I CCANNNNNTGG 1 cut(s) 199
VpaK11BI GGWCC 1 cut(s) 25
XceI RCATGY 1 cut(s) 604
XspI CTAG 2 cut(s) 185, 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.