Rh2AG024900

cyclin-dependent protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0016859
Physical Location & Seq
Reverse (-)
1763596 .. 1768206
4611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG024900.1

Sequence Viewer

Length: 456 bp
ATGCTTCACCCAATGGCCCGCGATTTGGATTTGGTTACACCTCCCGGCGCGTTGGAGCGTAACCTCAGCTATCAGGCCCCTGAGCAGCTAATTGGGTCAGAGATGTACACCTCTGCGGTGGACATGTGGGCATTGGCTTGCATTGTAGTTGAGATGACAACTGGTGTTGTTCTGTTTTCAGCCGATTCTACTTCTCATCCACGTACCCATCTGCAATCTATATTCGGACTATTGGGCACTCCAACAGTGAACCCATATCCTCTTGATGTGAAGGATCAATGGGCAGCCCAAAAGACATGTGAGCCTACTCTTGATCTATATGATCTACTCTTGCCAGTCTTGGGCCACGATGGATCTGAGCTCCTGATGGGACTACTGTGCATCGACCCGGCAAAGAGGATTACAGCTGAAGGGGCATTGAAGCACACCTACTTCAACCGTTATCGTCTGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000082 GO:0000086 GO:0000278 GO:0000307 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006325 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009653 GO:0009719 GO:0009725 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009888 GO:0009889 GO:0009934 GO:0009987 GO:0010016 GO:0010033 GO:0010103 GO:0010154 GO:0010374 GO:0010376 GO:0010389 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010564 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022414 GO:0022603 GO:0023052 GO:0030154 GO:0030332 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0032875 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0040007 GO:0042023 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044839 GO:0044843 GO:0046483 GO:0046777 GO:0048316 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051239 GO:0051276 GO:0051716 GO:0051726 GO:0060255 GO:0060560 GO:0061458 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097472 GO:0099402 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902806 GO:1902911 GO:1903047 GO:1990234 GO:2000026 GO:2000037 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko04068 ko04110 ko04114 ko04115 ko04151 ko04218 ko04540 ko04914 ko04934 ko05161 ko05162 ko05165 ko05168 ko05169 ko05200 ko05203 ko05215 ko05222 ko05226 map04068 map04110 map04114 map04115 map04151 map04218 map04540 map04914 map04934 map05161 map05162 map05165 map05168 map05169 map05200 map05203 map05215 map05222 map05226
Pfam Domains
Protein Families
Pkinase

Protein Analysis

151

Amino Acids

16.71

Weight (kDa)

5.02

Isoelectric Point (pI)

27.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 22 - 145 2e-16 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 21, 50
AciI CCGC 2 cut(s) 19, 116
AclWI GGATC 2 cut(s) 282, 361
AcuI CTGAAG 1 cut(s) 429
AfaI GTAC 2 cut(s) 107, 205
AfiI CCNNNNNNNGG 2 cut(s) 25, 341
AflIII ACRYGT 2 cut(s) 123, 296
AgsI TTSAA 2 cut(s) 421, 436
AluBI AGCT 4 cut(s) 69, 88, 361, 407
AluI AGCT 4 cut(s) 69, 88, 361, 407
Alw21I GWGCWC 1 cut(s) 363
AlwI GGATC 2 cut(s) 282, 361
AoxI GGCC 3 cut(s) 15, 75, 343
ApeKI GCWGC 2 cut(s) 85, 284
AspLEI GCGC 1 cut(s) 50
AspS9I GGNCC 3 cut(s) 16, 76, 343
AsuC2I CCSGG 2 cut(s) 45, 389
BaeGI GKGCMC 1 cut(s) 239
BanII GRGCYC 1 cut(s) 363
BarI GAAGNNNNNNTAC 2 cut(s) 413, 445
Bbv12I GWGCWC 1 cut(s) 363
BbvCI CCTCAGC 1 cut(s) 65
BbvI GCAGC 2 cut(s) 97, 296
BccI CCATC 3 cut(s) 216, 344, 361
BcnI CCSGG 2 cut(s) 45, 389
BisI GCNGC 2 cut(s) 86, 285
BlsI GCNGC 2 cut(s) 87, 286
Bme1390I CCNGG 2 cut(s) 45, 389
BmgT120I GGNCC 3 cut(s) 16, 76, 343
BmiI GGNNCC 1 cut(s) 78
BmrFI CCNGG 2 cut(s) 45, 389
BmsI GCATC 1 cut(s) 390
Bpu10I CCTNAGC 2 cut(s) 65, 81
BpuMI CCSGG 2 cut(s) 45, 389
BsaAI YACGTR 1 cut(s) 203
Bsc4I CCNNNNNNNGG 2 cut(s) 25, 341
Bse1I ACTGG 2 cut(s) 166, 335
BseGI GGATG 1 cut(s) 196
BseLI CCNNNNNNNGG 2 cut(s) 25, 341
BseMII CTCAG 3 cut(s) 72, 79, 348
BseNI ACTGG 2 cut(s) 166, 335
BseSI GKGCMC 1 cut(s) 239
BseXI GCAGC 2 cut(s) 97, 296
Bsh1236I CGCG 2 cut(s) 21, 50
BshFI GGCC 3 cut(s) 17, 77, 345
BsiHKAI GWGCWC 1 cut(s) 363
BsiSI CCGG 2 cut(s) 45, 389
BslFI GGGAC 1 cut(s) 384
BslI CCNNNNNNNGG 2 cut(s) 25, 341
BsmFI GGGAC 1 cut(s) 384
BsnI GGCC 3 cut(s) 17, 77, 345
Bsp1286I GDGCHC 2 cut(s) 239, 363
Bsp1407I TGTACA 1 cut(s) 105
Bsp143I GATC 4 cut(s) 274, 313, 322, 353
BspACI CCGC 2 cut(s) 19, 116
BspANI GGCC 3 cut(s) 17, 77, 345
BspCNI CTCAG 3 cut(s) 73, 78, 349
BspFNI CGCG 2 cut(s) 21, 50
BspLI GGNNCC 1 cut(s) 78
BspPI GGATC 2 cut(s) 282, 361
BsrGI TGTACA 1 cut(s) 105
BsrI ACTGG 2 cut(s) 166, 335
BssMI GATC 4 cut(s) 274, 313, 322, 353
Bst4CI ACNGT 3 cut(s) 247, 378, 440
BstAUI TGTACA 1 cut(s) 105
BstBAI YACGTR 1 cut(s) 203
BstC8I GCNNGC 2 cut(s) 19, 139
BstDEI CTNAG 3 cut(s) 65, 81, 357
BstF5I GGATG 1 cut(s) 196
BstFNI CGCG 2 cut(s) 21, 50
BstHHI GCGC 1 cut(s) 50
BstKTI GATC 4 cut(s) 277, 316, 325, 356
BstMBI GATC 4 cut(s) 274, 313, 322, 353
BstMWI GCNNNNNNNGC 1 cut(s) 413
BstNSI RCATGY 2 cut(s) 127, 300
BstSCI CCNGG 2 cut(s) 43, 387
BstSLI GKGCMC 1 cut(s) 239
BstUI CGCG 2 cut(s) 21, 50
BstV1I GCAGC 2 cut(s) 97, 296
BstX2I RGATCY 1 cut(s) 353
BstYI RGATCY 1 cut(s) 353
BsuRI GGCC 3 cut(s) 17, 77, 345
BtsCI GGATG 1 cut(s) 196
BtsIMutI CAGTG 1 cut(s) 252
Cac8I GCNNGC 2 cut(s) 19, 139
CfoI GCGC 1 cut(s) 50
Cfr13I GGNCC 3 cut(s) 16, 76, 343
Csp6I GTAC 2 cut(s) 106, 204
CviAII CATG 2 cut(s) 124, 297
CviQI GTAC 2 cut(s) 106, 204
DdeI CTNAG 3 cut(s) 65, 81, 357
DpnI GATC 4 cut(s) 276, 315, 324, 355
DpnII GATC 4 cut(s) 274, 313, 322, 353
Ecl136II GAGCTC 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 363
Eco53kI GAGCTC 1 cut(s) 361
Eco57I CTGAAG 1 cut(s) 429
EcoICRI GAGCTC 1 cut(s) 361
EcoO109I RGGNCCY 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 363
FaeI CATG 2 cut(s) 127, 300
FaiI YATR 6 cut(s) 125, 221, 256, 298, 319, 321
FaqI GGGAC 1 cut(s) 384
FatI CATG 2 cut(s) 123, 296
FauI CCCGC 1 cut(s) 26
Fnu4HI GCNGC 2 cut(s) 86, 285
FokI GGATG 1 cut(s) 183
FriOI GRGCYC 1 cut(s) 363
Fsp4HI GCNGC 2 cut(s) 86, 285
GlaI GCGC 1 cut(s) 49
GluI GCNGC 2 cut(s) 86, 285
HaeIII GGCC 3 cut(s) 17, 77, 345
HapII CCGG 2 cut(s) 45, 389
HhaI GCGC 1 cut(s) 50
Hin1II CATG 2 cut(s) 127, 300
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HinfI GANTC 1 cut(s) 185
HpaII CCGG 2 cut(s) 45, 389
Hpy166II GTNNAC 3 cut(s) 108, 121, 250
Hpy188I TCNGA 3 cut(s) 100, 227, 358
Hpy188III TCNNGA 3 cut(s) 263, 311, 364
Hpy8I GTNNAC 3 cut(s) 108, 121, 250
HpyAV CCTTC 2 cut(s) 265, 404
HpyCH4III ACNGT 3 cut(s) 247, 378, 440
HpyCH4IV ACGT 1 cut(s) 202
HpyCH4V TGCA 3 cut(s) 141, 214, 381
HpyF10VI GCNNNNNNNGC 1 cut(s) 413
HpyF3I CTNAG 3 cut(s) 65, 81, 357
HpySE526I ACGT 1 cut(s) 202
Hsp92II CATG 2 cut(s) 127, 300
HspAI GCGC 1 cut(s) 48
Kzo9I GATC 4 cut(s) 274, 313, 322, 353
LmnI GCTCC 2 cut(s) 55, 366
LpnPI CCDG 7 cut(s) 58, 59, 93, 147, 348, 377, 402
Lsp1109I GCAGC 2 cut(s) 97, 296
LweI GCATC 1 cut(s) 390
MaeII ACGT 1 cut(s) 202
MaeIII GTNAC 2 cut(s) 34, 59
MalI GATC 4 cut(s) 276, 315, 324, 355
MboI GATC 4 cut(s) 274, 313, 322, 353
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 2 cut(s) 239, 363
MluCI AATT 1 cut(s) 90
MmeI TCCRAC 2 cut(s) 33, 266
MnlI CCTC 5 cut(s) 51, 74, 121, 270, 390
MspA1I CMGCKG 1 cut(s) 407
MspI CCGG 2 cut(s) 45, 389
MspR9I CCNGG 2 cut(s) 45, 389
MvnI CGCG 2 cut(s) 21, 50
MwoI GCNNNNNNNGC 1 cut(s) 413
NciI CCSGG 2 cut(s) 45, 389
NdeII GATC 4 cut(s) 274, 313, 322, 353
NlaIII CATG 2 cut(s) 127, 300
NlaIV GGNNCC 1 cut(s) 78
NspI RCATGY 2 cut(s) 127, 300
PciI ACATGT 2 cut(s) 123, 296
PfeI GAWTC 1 cut(s) 185
PkrI GCNGC 2 cut(s) 87, 286
Ppu21I YACGTR 1 cut(s) 203
PscI ACATGT 2 cut(s) 123, 296
Psp124BI GAGCTC 1 cut(s) 363
PspN4I GGNNCC 1 cut(s) 78
PspPI GGNCC 3 cut(s) 16, 76, 343
PsuI RGATCY 1 cut(s) 353
PvuII CAGCTG 1 cut(s) 407
RsaI GTAC 2 cut(s) 107, 205
RsaNI GTAC 2 cut(s) 106, 204
SacI GAGCTC 1 cut(s) 363
SatI GCNGC 2 cut(s) 86, 285
Sau3AI GATC 4 cut(s) 274, 313, 322, 353
Sau96I GGNCC 3 cut(s) 16, 76, 343
ScrFI CCNGG 2 cut(s) 45, 389
SduI GDGCHC 2 cut(s) 239, 363
SetI ASST 9 cut(s) 43, 66, 71, 90, 113, 205, 363, 409, 431
SfaNI GCATC 1 cut(s) 390
Sse9I AATT 1 cut(s) 90
SsiI CCGC 2 cut(s) 19, 116
SstI GAGCTC 1 cut(s) 363
StyD4I CCNGG 2 cut(s) 43, 387
TaaI ACNGT 3 cut(s) 247, 378, 440
TaiI ACGT 1 cut(s) 205
TaqI TCGA 1 cut(s) 384
TasI AATT 1 cut(s) 90
TatI WGTACW 1 cut(s) 105
TfiI GAWTC 1 cut(s) 185
TscAI CASTG 1 cut(s) 252
TseI GCWGC 2 cut(s) 85, 284
TspRI CASTG 1 cut(s) 252
XceI RCATGY 2 cut(s) 127, 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.