RNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000026445 RLG00000026447 RLG00000026453 |
| rosa_multiflora | Rmu_sc0006315.1_g000005 Rmu_sc0013545.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00280560 |
| rosa_rugosa | Rorug01G0407600 Rorug01G0407600 Rorug01G0407700 |
| rosa_samantha | Rh1AG421800 |
| rosa_wichuraiana | Rw1G037550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 878 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 575 |
| AatII | GACGTC | 1 cut(s) | 573 |
| AccB1I | GGYRCC | 1 cut(s) | 594 |
| AccI | GTMKAC | 2 cut(s) | 588, 1175 |
| AccII | CGCG | 2 cut(s) | 517, 1182 |
| AciI | CCGC | 8 cut(s) | 259, 279, 348, 515, 517, 607, 1180, 1225 |
| AclWI | GGATC | 3 cut(s) | 12, 1133, 1162 |
| AcoI | YGGCCR | 1 cut(s) | 260 |
| AcsI | RAATTY | 2 cut(s) | 979, 1081 |
| AcuI | CTGAAG | 2 cut(s) | 115, 413 |
| AcyI | GRCGYC | 2 cut(s) | 570, 595 |
| AfaI | GTAC | 1 cut(s) | 1075 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 430, 787, 802, 803, 936, 1066, 1207 |
| AflIII | ACRYGT | 1 cut(s) | 882 |
| AgsI | TTSAA | 3 cut(s) | 841, 913, 1126 |
| AhlI | ACTAGT | 1 cut(s) | 656 |
| AjnI | CCWGG | 4 cut(s) | 114, 330, 956, 1049 |
| AluBI | AGCT | 8 cut(s) | 231, 421, 474, 617, 767, 933, 1003, 1056 |
| AluI | AGCT | 8 cut(s) | 231, 421, 474, 617, 767, 933, 1003, 1056 |
| Alw21I | GWGCWC | 3 cut(s) | 423, 1150, 1248 |
| Alw26I | GTCTC | 3 cut(s) | 521, 583, 1013 |
| AlwI | GGATC | 3 cut(s) | 12, 1133, 1162 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 138 |
| AoxI | GGCC | 2 cut(s) | 260, 1047 |
| ApeKI | GCWGC | 6 cut(s) | 138, 231, 312, 474, 604, 1000 |
| ApoI | RAATTY | 2 cut(s) | 979, 1081 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 555, 587, 892, 924 |
| AspLEI | GCGC | 3 cut(s) | 227, 597, 1184 |
| AspS9I | GGNCC | 1 cut(s) | 1047 |
| AsuHPI | GGTGA | 2 cut(s) | 351, 818 |
| AsuII | TTCGAA | 1 cut(s) | 83 |
| AsuNHI | GCTAGC | 1 cut(s) | 227 |
| BanI | GGYRCC | 1 cut(s) | 594 |
| BanII | GRGCYC | 1 cut(s) | 423 |
| BauI | CACGAG | 1 cut(s) | 1149 |
| BbsI | GAAGAC | 2 cut(s) | 207, 331 |
| Bbv12I | GWGCWC | 3 cut(s) | 423, 1150, 1248 |
| BbvI | GCAGC | 6 cut(s) | 125, 218, 299, 461, 616, 1012 |
| BccI | CCATC | 6 cut(s) | 164, 169, 504, 517, 1019, 1199 |
| BceAI | ACGGC | 1 cut(s) | 460 |
| BciT130I | CCWGG | 4 cut(s) | 116, 332, 958, 1051 |
| BcoDI | GTCTC | 3 cut(s) | 521, 583, 1013 |
| BcuI | ACTAGT | 1 cut(s) | 656 |
| BfaI | CTAG | 5 cut(s) | 228, 657, 1019, 1088, 1249 |
| BfmI | CTRYAG | 1 cut(s) | 142 |
| BfoI | RGCGCY | 1 cut(s) | 598 |
| BglII | AGATCT | 2 cut(s) | 538, 696 |
| BisI | GCNGC | 9 cut(s) | 139, 232, 260, 280, 313, 349, 475, 605, 1001 |
| BlsI | GCNGC | 9 cut(s) | 140, 233, 261, 281, 314, 350, 476, 606, 1002 |
| Bme1390I | CCNGG | 4 cut(s) | 116, 332, 958, 1051 |
| BmgT120I | GGNCC | 1 cut(s) | 1047 |
| BmiI | GGNNCC | 2 cut(s) | 328, 596 |
| BmrFI | CCNGG | 4 cut(s) | 116, 332, 958, 1051 |
| BmsI | GCATC | 1 cut(s) | 156 |
| BmtI | GCTAGC | 1 cut(s) | 231 |
| BpiI | GAAGAC | 2 cut(s) | 207, 331 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 525, 557 |
| Bpu14I | TTCGAA | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 1 cut(s) | 1115 |
| Bsa29I | ATCGAT | 2 cut(s) | 159, 1014 |
| BsaHI | GRCGYC | 2 cut(s) | 570, 595 |
| BsaJI | CCNNGG | 4 cut(s) | 330, 362, 515, 956 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 430, 787, 802, 803, 936, 1066, 1207 |
| Bse118I | RCCGGY | 1 cut(s) | 727 |
| Bse1I | ACTGG | 1 cut(s) | 263 |
| Bse3DI | GCAATG | 1 cut(s) | 1201 |
| BseBI | CCWGG | 4 cut(s) | 116, 332, 958, 1051 |
| BseCI | ATCGAT | 2 cut(s) | 159, 1014 |
| BseDI | CCNNGG | 4 cut(s) | 330, 362, 515, 956 |
| BseGI | GGATG | 3 cut(s) | 147, 421, 525 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 430, 787, 802, 803, 936, 1066, 1207 |
| BseMI | GCAATG | 1 cut(s) | 1201 |
| BseMII | CTCAG | 1 cut(s) | 596 |
| BseNI | ACTGG | 1 cut(s) | 263 |
| BseRI | GAGGAG | 1 cut(s) | 549 |
| BseXI | GCAGC | 6 cut(s) | 125, 218, 299, 461, 616, 1012 |
| BseYI | CCCAGC | 1 cut(s) | 383 |
| Bsh1236I | CGCG | 2 cut(s) | 517, 1182 |
| Bsh1285I | CGRYCG | 1 cut(s) | 751 |
| BshFI | GGCC | 2 cut(s) | 262, 1049 |
| BshNI | GGYRCC | 1 cut(s) | 594 |
| BshVI | ATCGAT | 2 cut(s) | 159, 1014 |
| BsiEI | CGRYCG | 1 cut(s) | 751 |
| BsiHKAI | GWGCWC | 3 cut(s) | 423, 1150, 1248 |
| BsiSI | CCGG | 3 cut(s) | 424, 728, 774 |
| BslFI | GGGAC | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 430, 787, 802, 803, 936, 1066, 1207 |
| BsmAI | GTCTC | 3 cut(s) | 521, 583, 1013 |
| BsmBI | CGTCTC | 1 cut(s) | 1013 |
| BsmFI | GGGAC | 1 cut(s) | 303 |
| BsnI | GGCC | 2 cut(s) | 262, 1049 |
| Bsp119I | TTCGAA | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 3 cut(s) | 423, 1150, 1248 |
| Bsp143I | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| BspACI | CCGC | 8 cut(s) | 259, 279, 348, 515, 517, 607, 1180, 1225 |
| BspANI | GGCC | 2 cut(s) | 262, 1049 |
| BspCNI | CTCAG | 1 cut(s) | 595 |
| BspDI | ATCGAT | 2 cut(s) | 159, 1014 |
| BspFNI | CGCG | 2 cut(s) | 517, 1182 |
| BspHI | TCATGA | 2 cut(s) | 499, 646 |
| BspLI | GGNNCC | 2 cut(s) | 328, 596 |
| BspOI | GCTAGC | 1 cut(s) | 231 |
| BspPI | GGATC | 3 cut(s) | 12, 1133, 1162 |
| BspT104I | TTCGAA | 1 cut(s) | 83 |
| BspT107I | GGYRCC | 1 cut(s) | 594 |
| BsrDI | GCAATG | 1 cut(s) | 1201 |
| BsrFI | RCCGGY | 1 cut(s) | 727 |
| BsrI | ACTGG | 1 cut(s) | 263 |
| BssAI | RCCGGY | 1 cut(s) | 727 |
| BssECI | CCNNGG | 4 cut(s) | 330, 362, 515, 956 |
| BssMI | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| BssNAI | GTATAC | 1 cut(s) | 589 |
| BssNI | GRCGYC | 2 cut(s) | 570, 595 |
| BssSI | CACGAG | 1 cut(s) | 1149 |
| Bst1107I | GTATAC | 1 cut(s) | 589 |
| Bst2BI | CACGAG | 1 cut(s) | 1149 |
| Bst2UI | CCWGG | 4 cut(s) | 116, 332, 958, 1051 |
| Bst4CI | ACNGT | 6 cut(s) | 62, 363, 482, 752, 785, 1078 |
| BstACI | GRCGYC | 2 cut(s) | 570, 595 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 312 |
| BstBI | TTCGAA | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 3 cut(s) | 181, 229, 1229 |
| BstDEI | CTNAG | 3 cut(s) | 436, 582, 996 |
| BstDSI | CCRYGG | 2 cut(s) | 362, 515 |
| BstF5I | GGATG | 3 cut(s) | 147, 421, 525 |
| BstFNI | CGCG | 2 cut(s) | 517, 1182 |
| BstH2I | RGCGCY | 1 cut(s) | 598 |
| BstHHI | GCGC | 3 cut(s) | 227, 597, 1184 |
| BstKTI | GATC | 9 cut(s) | 7, 12, 250, 541, 699, 868, 1018, 1141, 1170 |
| BstMAI | GTCTC | 3 cut(s) | 521, 583, 1013 |
| BstMBI | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| BstMCI | CGRYCG | 1 cut(s) | 751 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 144, 231, 240, 288, 312, 384, 601, 1224 |
| BstNI | CCWGG | 4 cut(s) | 116, 332, 958, 1051 |
| BstSCI | CCNGG | 4 cut(s) | 114, 330, 956, 1049 |
| BstSFI | CTRYAG | 1 cut(s) | 142 |
| BstUI | CGCG | 2 cut(s) | 517, 1182 |
| BstV1I | GCAGC | 6 cut(s) | 125, 218, 299, 461, 616, 1012 |
| BstV2I | GAAGAC | 2 cut(s) | 207, 331 |
| BstX2I | RGATCY | 3 cut(s) | 538, 696, 1167 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 163 |
| BstYI | RGATCY | 3 cut(s) | 538, 696, 1167 |
| BstZ17I | GTATAC | 1 cut(s) | 589 |
| Bsu15I | ATCGAT | 2 cut(s) | 159, 1014 |
| BsuRI | GGCC | 2 cut(s) | 262, 1049 |
| BsuTUI | ATCGAT | 2 cut(s) | 159, 1014 |
| BtgI | CCRYGG | 2 cut(s) | 362, 515 |
| BtsCI | GGATG | 3 cut(s) | 147, 421, 525 |
| BtsIMutI | CAGTG | 2 cut(s) | 580, 790 |
| Cac8I | GCNNGC | 3 cut(s) | 181, 229, 1229 |
| CaiI | CAGNNNCTG | 1 cut(s) | 138 |
| CciI | TCATGA | 2 cut(s) | 499, 646 |
| CfoI | GCGC | 3 cut(s) | 227, 597, 1184 |
| Cfr10I | RCCGGY | 1 cut(s) | 727 |
| Cfr13I | GGNCC | 1 cut(s) | 1047 |
| Cfr42I | CCGCGG | 1 cut(s) | 518 |
| ClaI | ATCGAT | 2 cut(s) | 159, 1014 |
| Csp6I | GTAC | 1 cut(s) | 1074 |
| CviAII | CATG | 4 cut(s) | 307, 500, 647, 1195 |
| CviQI | GTAC | 1 cut(s) | 1074 |
| DdeI | CTNAG | 3 cut(s) | 436, 582, 996 |
| DinI | GGCGCC | 1 cut(s) | 596 |
| DpnI | GATC | 9 cut(s) | 6, 11, 249, 540, 698, 867, 1017, 1140, 1169 |
| DpnII | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 575 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 575 |
| EaeI | YGGCCR | 1 cut(s) | 260 |
| EciI | GGCGGA | 1 cut(s) | 1214 |
| Ecl136II | GAGCTC | 1 cut(s) | 421 |
| Eco24I | GRGCYC | 1 cut(s) | 423 |
| Eco32I | GATATC | 1 cut(s) | 295 |
| Eco53kI | GAGCTC | 1 cut(s) | 421 |
| Eco57I | CTGAAG | 2 cut(s) | 115, 413 |
| EcoICRI | GAGCTC | 1 cut(s) | 421 |
| EcoRII | CCWGG | 4 cut(s) | 114, 330, 956, 1049 |
| EcoRV | GATATC | 1 cut(s) | 295 |
| EcoT38I | GRGCYC | 1 cut(s) | 423 |
| EgeI | GGCGCC | 1 cut(s) | 596 |
| EheI | GGCGCC | 1 cut(s) | 596 |
| Esp3I | CGTCTC | 1 cut(s) | 1013 |
| FaeI | CATG | 4 cut(s) | 310, 503, 650, 1198 |
| FaqI | GGGAC | 1 cut(s) | 303 |
| FatI | CATG | 4 cut(s) | 306, 499, 646, 1194 |
| FauI | CCCGC | 1 cut(s) | 1187 |
| FblI | GTMKAC | 2 cut(s) | 588, 1175 |
| Fnu4HI | GCNGC | 9 cut(s) | 139, 232, 260, 280, 313, 349, 475, 605, 1001 |
| FokI | GGATG | 3 cut(s) | 134, 428, 532 |
| FriOI | GRGCYC | 1 cut(s) | 423 |
| Fsp4HI | GCNGC | 9 cut(s) | 139, 232, 260, 280, 313, 349, 475, 605, 1001 |
| FspBI | CTAG | 5 cut(s) | 228, 657, 1019, 1088, 1249 |
| GlaI | GCGC | 3 cut(s) | 226, 596, 1183 |
| GluI | GCNGC | 9 cut(s) | 139, 232, 260, 280, 313, 349, 475, 605, 1001 |
| GsaI | CCCAGC | 1 cut(s) | 387 |
| HaeII | RGCGCY | 1 cut(s) | 598 |
| HaeIII | GGCC | 2 cut(s) | 262, 1049 |
| HapII | CCGG | 3 cut(s) | 424, 728, 774 |
| HhaI | GCGC | 3 cut(s) | 227, 597, 1184 |
| Hin1I | GRCGYC | 2 cut(s) | 570, 595 |
| Hin1II | CATG | 4 cut(s) | 310, 503, 650, 1198 |
| Hin6I | GCGC | 3 cut(s) | 225, 595, 1182 |
| HinP1I | GCGC | 3 cut(s) | 225, 595, 1182 |
| HpaII | CCGG | 3 cut(s) | 424, 728, 774 |
| HphI | GGTGA | 2 cut(s) | 351, 818 |
| Hpy166II | GTNNAC | 7 cut(s) | 272, 589, 708, 823, 858, 989, 1176 |
| Hpy188I | TCNGA | 8 cut(s) | 9, 28, 48, 54, 72, 78, 554, 1143 |
| Hpy188III | TCNNGA | 4 cut(s) | 251, 500, 647, 869 |
| Hpy8I | GTNNAC | 7 cut(s) | 272, 589, 708, 823, 858, 989, 1176 |
| HpyAV | CCTTC | 1 cut(s) | 1093 |
| HpyCH4III | ACNGT | 6 cut(s) | 62, 363, 482, 752, 785, 1078 |
| HpyCH4IV | ACGT | 3 cut(s) | 570, 882, 1072 |
| HpyCH4V | TGCA | 5 cut(s) | 306, 378, 477, 488, 1206 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 144, 231, 240, 288, 312, 384, 601, 1224 |
| HpyF3I | CTNAG | 3 cut(s) | 436, 582, 996 |
| HpySE526I | ACGT | 3 cut(s) | 570, 882, 1072 |
| Hsp92I | GRCGYC | 2 cut(s) | 570, 595 |
| Hsp92II | CATG | 4 cut(s) | 310, 503, 650, 1198 |
| HspAI | GCGC | 3 cut(s) | 225, 595, 1182 |
| KasI | GGCGCC | 1 cut(s) | 594 |
| KspI | CCGCGG | 1 cut(s) | 518 |
| Kzo9I | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| LmnI | GCTCC | 4 cut(s) | 188, 332, 426, 1053 |
| Lsp1109I | GCAGC | 6 cut(s) | 125, 218, 299, 461, 616, 1012 |
| LweI | GCATC | 1 cut(s) | 156 |
| MaeI | CTAG | 5 cut(s) | 228, 657, 1019, 1088, 1249 |
| MaeII | ACGT | 3 cut(s) | 570, 882, 1072 |
| MaeIII | GTNAC | 2 cut(s) | 188, 566 |
| MalI | GATC | 9 cut(s) | 6, 11, 249, 540, 698, 867, 1017, 1140, 1169 |
| MboI | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| MboII | GAAGA | 4 cut(s) | 121, 131, 212, 331 |
| MflI | RGATCY | 3 cut(s) | 538, 696, 1167 |
| MhlI | GDGCHC | 3 cut(s) | 423, 1150, 1248 |
| MluCI | AATT | 3 cut(s) | 98, 979, 1081 |
| Mly113I | GGCGCC | 1 cut(s) | 595 |
| MlyI | GAGTC | 1 cut(s) | 76 |
| MmeI | TCCRAC | 2 cut(s) | 44, 444 |
| MnlI | CCTC | 7 cut(s) | 161, 406, 527, 633, 781, 802, 1060 |
| MseI | TTAA | 1 cut(s) | 1233 |
| MspA1I | CMGCKG | 2 cut(s) | 517, 607 |
| MspI | CCGG | 3 cut(s) | 424, 728, 774 |
| MspR9I | CCNGG | 4 cut(s) | 116, 332, 958, 1051 |
| MvaI | CCWGG | 4 cut(s) | 116, 332, 958, 1051 |
| MvnI | CGCG | 2 cut(s) | 517, 1182 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 144, 231, 240, 288, 312, 384, 601, 1224 |
| NarI | GGCGCC | 1 cut(s) | 595 |
| NdeII | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| NheI | GCTAGC | 1 cut(s) | 227 |
| NlaIII | CATG | 4 cut(s) | 310, 503, 650, 1198 |
| NlaIV | GGNNCC | 2 cut(s) | 328, 596 |
| NmuCI | GTSAC | 2 cut(s) | 188, 566 |
| NspV | TTCGAA | 1 cut(s) | 83 |
| PagI | TCATGA | 2 cut(s) | 499, 646 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 348 |
| PfeI | GAWTC | 9 cut(s) | 23, 43, 49, 55, 73, 85, 236, 770, 1211 |
| PkrI | GCNGC | 9 cut(s) | 140, 233, 261, 281, 314, 350, 476, 606, 1002 |
| PleI | GAGTC | 1 cut(s) | 75 |
| PluTI | GGCGCC | 1 cut(s) | 598 |
| PpsI | GAGTC | 1 cut(s) | 75 |
| PsiI | TTATAA | 1 cut(s) | 878 |
| Psp124BI | GAGCTC | 1 cut(s) | 423 |
| Psp6I | CCWGG | 4 cut(s) | 114, 330, 956, 1049 |
| PspFI | CCCAGC | 1 cut(s) | 383 |
| PspGI | CCWGG | 4 cut(s) | 114, 330, 956, 1049 |
| PspN4I | GGNNCC | 2 cut(s) | 328, 596 |
| PspPI | GGNCC | 1 cut(s) | 1047 |
| PstNI | CAGNNNCTG | 1 cut(s) | 138 |
| PsuI | RGATCY | 3 cut(s) | 538, 696, 1167 |
| RsaI | GTAC | 1 cut(s) | 1075 |
| RsaNI | GTAC | 1 cut(s) | 1074 |
| SacI | GAGCTC | 1 cut(s) | 423 |
| SacII | CCGCGG | 1 cut(s) | 518 |
| SaqAI | TTAA | 1 cut(s) | 1233 |
| SatI | GCNGC | 9 cut(s) | 139, 232, 260, 280, 313, 349, 475, 605, 1001 |
| Sau3AI | GATC | 9 cut(s) | 4, 9, 247, 538, 696, 865, 1015, 1138, 1167 |
| Sau96I | GGNCC | 1 cut(s) | 1047 |
| SchI | GAGTC | 1 cut(s) | 76 |
| ScrFI | CCNGG | 4 cut(s) | 116, 332, 958, 1051 |
| SduI | GDGCHC | 3 cut(s) | 423, 1150, 1248 |
| SfaNI | GCATC | 1 cut(s) | 156 |
| SfcI | CTRYAG | 1 cut(s) | 142 |
| SfoI | GGCGCC | 1 cut(s) | 596 |
| Sfr303I | CCGCGG | 1 cut(s) | 518 |
| SfuI | TTCGAA | 1 cut(s) | 83 |
| SgrBI | CCGCGG | 1 cut(s) | 518 |
| SmlI | CTYRAG | 1 cut(s) | 1094 |
| SmoI | CTYRAG | 1 cut(s) | 1094 |
| SpeI | ACTAGT | 1 cut(s) | 656 |
| Sse9I | AATT | 3 cut(s) | 98, 979, 1081 |
| SsiI | CCGC | 8 cut(s) | 259, 279, 348, 515, 517, 607, 1180, 1225 |
| SspDI | GGCGCC | 1 cut(s) | 594 |
| SspMI | CTAG | 5 cut(s) | 228, 657, 1019, 1088, 1249 |
| SstI | GAGCTC | 1 cut(s) | 423 |
| StyD4I | CCNGG | 4 cut(s) | 114, 330, 956, 1049 |
| TaaI | ACNGT | 6 cut(s) | 62, 363, 482, 752, 785, 1078 |
| TaiI | ACGT | 3 cut(s) | 573, 885, 1075 |
| TaqI | TCGA | 4 cut(s) | 83, 159, 741, 1014 |
| TasI | AATT | 3 cut(s) | 98, 979, 1081 |
| TauI | GCSGC | 3 cut(s) | 262, 282, 351 |
| TfiI | GAWTC | 9 cut(s) | 23, 43, 49, 55, 73, 85, 236, 770, 1211 |
| Tru1I | TTAA | 1 cut(s) | 1233 |
| Tru9I | TTAA | 1 cut(s) | 1233 |
| TscAI | CASTG | 2 cut(s) | 580, 790 |
| TseFI | GTSAC | 2 cut(s) | 188, 566 |
| TseI | GCWGC | 6 cut(s) | 138, 231, 312, 474, 604, 1000 |
| Tsp45I | GTSAC | 2 cut(s) | 188, 566 |
| TspDTI | ATGAA | 2 cut(s) | 213, 965 |
| TspGWI | ACGGA | 2 cut(s) | 47, 701 |
| TspRI | CASTG | 2 cut(s) | 580, 790 |
| XapI | RAATTY | 2 cut(s) | 979, 1081 |
| XmiI | GTMKAC | 2 cut(s) | 588, 1175 |
| XspI | CTAG | 5 cut(s) | 228, 657, 1019, 1088, 1249 |
| ZraI | GACGTC | 1 cut(s) | 571 |