RNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19350 |
| fragaria_vesca | FvH4_2g34070 |
| rosa_chinensis | RchiOBHm_Chr6g0308281 |
| rosa_laevigata | RLG00000010651 |
| rosa_multiflora | Rmu_sc0005523.1_g000005 Rmu_sc0013917.1_g000002 Rmu_ssc0000355.1_g000010 Rmu_ssc0000355.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00160290 |
| rosa_samantha | Rh6AG474800 Rh6BG485400 Rh6CG490500 Rh6DG476900 Rh6DG477100 |
| rosa_wichuraiana | Rw6G041410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 74 |
| AluBI | AGCT | 2 cut(s) | 98, 215 |
| AluI | AGCT | 2 cut(s) | 98, 215 |
| AoxI | GGCC | 1 cut(s) | 189 |
| ApeKI | GCWGC | 3 cut(s) | 95, 212, 215 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 60 |
| AspLEI | GCGC | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 3 cut(s) | 62, 115, 150 |
| BbvI | GCAGC | 3 cut(s) | 107, 202, 224 |
| BccI | CCATC | 1 cut(s) | 215 |
| BceAI | ACGGC | 2 cut(s) | 25, 31 |
| BfaI | CTAG | 1 cut(s) | 152 |
| BfoI | RGCGCY | 1 cut(s) | 29 |
| BisI | GCNGC | 3 cut(s) | 96, 213, 216 |
| BlsI | GCNGC | 3 cut(s) | 97, 214, 217 |
| BmsI | GCATC | 1 cut(s) | 33 |
| BpmI | CTGGAG | 1 cut(s) | 140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 1 cut(s) | 192 |
| BseDI | CCNNGG | 1 cut(s) | 192 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BseXI | GCAGC | 3 cut(s) | 107, 202, 224 |
| BshFI | GGCC | 1 cut(s) | 191 |
| BslFI | GGGAC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 140 |
| BsmI | GAATGC | 1 cut(s) | 117 |
| BsnI | GGCC | 1 cut(s) | 191 |
| Bsp19I | CCATGG | 1 cut(s) | 192 |
| BspANI | GGCC | 1 cut(s) | 191 |
| BspCNI | CTCAG | 1 cut(s) | 127 |
| BssECI | CCNNGG | 1 cut(s) | 192 |
| BssT1I | CCWWGG | 1 cut(s) | 192 |
| Bst4CI | ACNGT | 1 cut(s) | 40 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 182 |
| BstDEI | CTNAG | 3 cut(s) | 99, 135, 202 |
| BstDSI | CCRYGG | 1 cut(s) | 192 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstH2I | RGCGCY | 1 cut(s) | 29 |
| BstHHI | GCGC | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 173, 182, 212 |
| BstV1I | GCAGC | 3 cut(s) | 107, 202, 224 |
| BsuRI | GGCC | 1 cut(s) | 191 |
| BtgI | CCRYGG | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| CfoI | GCGC | 1 cut(s) | 28 |
| CseI | GACGC | 1 cut(s) | 40 |
| CviAII | CATG | 1 cut(s) | 193 |
| CviJI | RGCY | 4 cut(s) | 98, 167, 191, 215 |
| CviKI_1 | RGCY | 4 cut(s) | 98, 167, 191, 215 |
| DdeI | CTNAG | 3 cut(s) | 99, 135, 202 |
| Eco130I | CCWWGG | 1 cut(s) | 192 |
| EcoT14I | CCWWGG | 1 cut(s) | 192 |
| ErhI | CCWWGG | 1 cut(s) | 192 |
| FaeI | CATG | 1 cut(s) | 196 |
| FaiI | YATR | 1 cut(s) | 194 |
| FaqI | GGGAC | 1 cut(s) | 140 |
| FatI | CATG | 1 cut(s) | 192 |
| Fnu4HI | GCNGC | 3 cut(s) | 96, 213, 216 |
| FokI | GGATG | 1 cut(s) | 209 |
| Fsp4HI | GCNGC | 3 cut(s) | 96, 213, 216 |
| FspBI | CTAG | 1 cut(s) | 152 |
| GlaI | GCGC | 1 cut(s) | 27 |
| GluI | GCNGC | 3 cut(s) | 96, 213, 216 |
| GsuI | CTGGAG | 1 cut(s) | 140 |
| HaeII | RGCGCY | 1 cut(s) | 29 |
| HaeIII | GGCC | 1 cut(s) | 191 |
| HgaI | GACGC | 1 cut(s) | 40 |
| HhaI | GCGC | 1 cut(s) | 28 |
| Hin1II | CATG | 1 cut(s) | 196 |
| Hin6I | GCGC | 1 cut(s) | 26 |
| HinP1I | GCGC | 1 cut(s) | 26 |
| HinfI | GANTC | 1 cut(s) | 155 |
| HphI | GGTGA | 3 cut(s) | 62, 115, 150 |
| Hpy188III | TCNNGA | 2 cut(s) | 119, 134 |
| Hpy99I | CGWCG | 2 cut(s) | 17, 34 |
| HpyAV | CCTTC | 2 cut(s) | 79, 202 |
| HpyCH4III | ACNGT | 1 cut(s) | 40 |
| HpyCH4V | TGCA | 1 cut(s) | 185 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 173, 182, 212 |
| HpyF3I | CTNAG | 3 cut(s) | 99, 135, 202 |
| Hsp92II | CATG | 1 cut(s) | 196 |
| HspAI | GCGC | 1 cut(s) | 26 |
| LpnPI | CCDG | 4 cut(s) | 93, 104, 147, 174 |
| Lsp1109I | GCAGC | 3 cut(s) | 107, 202, 224 |
| LweI | GCATC | 1 cut(s) | 33 |
| MaeI | CTAG | 1 cut(s) | 152 |
| MaeIII | GTNAC | 2 cut(s) | 103, 156 |
| MluCI | AATT | 2 cut(s) | 56, 180 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MnlI | CCTC | 5 cut(s) | 46, 75, 117, 157, 181 |
| MroXI | GAANNNNTTC | 1 cut(s) | 60 |
| MseI | TTAA | 1 cut(s) | 170 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| Mva1269I | GAATGC | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 173, 182, 212 |
| NcoI | CCATGG | 1 cut(s) | 192 |
| NlaIII | CATG | 1 cut(s) | 196 |
| NmuCI | GTSAC | 2 cut(s) | 103, 156 |
| PctI | GAATGC | 1 cut(s) | 117 |
| PdmI | GAANNNNTTC | 1 cut(s) | 60 |
| PkrI | GCNGC | 3 cut(s) | 97, 214, 217 |
| PleI | GAGTC | 1 cut(s) | 163 |
| PpsI | GAGTC | 1 cut(s) | 163 |
| PvuII | CAGCTG | 1 cut(s) | 215 |
| SaqAI | TTAA | 1 cut(s) | 170 |
| SatI | GCNGC | 3 cut(s) | 96, 213, 216 |
| SchI | GAGTC | 1 cut(s) | 164 |
| SetI | ASST | 3 cut(s) | 100, 105, 217 |
| SfaNI | GCATC | 1 cut(s) | 33 |
| SgeI | CNNG | 9 cut(s) | 59, 80, 103, 120, 131, 146, 164, 173, 205 |
| Sse9I | AATT | 2 cut(s) | 56, 180 |
| SspMI | CTAG | 1 cut(s) | 152 |
| StyI | CCWWGG | 1 cut(s) | 192 |
| TaaI | ACNGT | 1 cut(s) | 40 |
| TasI | AATT | 2 cut(s) | 56, 180 |
| Tru1I | TTAA | 1 cut(s) | 170 |
| Tru9I | TTAA | 1 cut(s) | 170 |
| TseFI | GTSAC | 2 cut(s) | 103, 156 |
| TseI | GCWGC | 3 cut(s) | 95, 212, 215 |
| Tsp45I | GTSAC | 2 cut(s) | 103, 156 |
| XmnI | GAANNNNTTC | 1 cut(s) | 60 |
| XspI | CTAG | 1 cut(s) | 152 |