Rmu_sc0018344.1_g000002

Sister chromatid cohesion protein PDS5 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018344.1
Physical Location & Seq
Forward (+)
4781 .. 18539
13759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018344.1_g000002.1.cds

Sequence Viewer

Length: 4059 bp
atggacgagtctgcccttcaactcgtcgccaaaatcggcaaccagctccgccgtcaaacccgtcctaacaaggactccgtcgtcaaatcgctccgagaagctacagtggctttggcggagctagagcagccttcaggctccacaaagagggaagccaccaggaaactagaagcggctatagagcctctgaaggaaaccattgttaaaggcttgcttcggcatcgagataaggatgtgaggcttttagtggccatctgtgccactgagatgatgagactcatggcaccggaaccgccttttgaggacagggatctcagagatgtgtttaagcttcttgtgagtgtgtttgcggagctaggtgataccgcaaactcgctgttttcaaagagggctaagatagtggagattgttgcaaagttgaagtgttgtgtgatcatgttggacattgactgtaatgatgttgttcttgacatgttcaatactttcttctctgtcgtgagagaaaatcatcagcagactttgatcaaggatattttgtctataatggctgagatactaaatgaggaagcttctcaccctcttttggatgtgctgctccgtaatcttgtgaaggagggaacggatacagcctctgcttcttcccagcttgcagtttctgtgatccaaacctgcgcagaaaagctggaaaccttagtttgtggctttttgacatcttgtattttagatagagatgctgtggggagtgagctcaaggaattttaccatgaaatcattttcaaaatttttgagtgtgctcctcagatgcttcttgctgtcatccctaatttaactcaagagttactgactgatcaggtcgatgtccgaataaaagctgttaaactaattggaaaactcttttcactgcctgatcaccatatttcacgaaaatatgatgacctcttcaaagagtttctgaaaagattctcggataagtctgtggaagttagagttagtgctctacaatgcgctcgagtttgctatgtaaccaatccatctggggaagaatcacaaaaacttctatcttcccttgaaggtcgattacgagatttcgatgataaagtgagaacacaagcagtaattgtttcctgtgatcttgccatgtcaaatctgagatactttcctcccaaactaatatctcaaactactgaaagacttcgggacaagaagatacctattagaaagatggctctgcaaaagttgatggaagtctaccggtattactgtaacaaatgttctgaaggttacattgcaataagtgaccactttgaacagattccatgtaaaatcttgatgctctgctatgataaagagtgtaaggagttcagggcccaaaatatggagcttgttcttgcagaagatttattcccggctgttctttcgatggaagaaaggacaaggcactggatccatttgttttcagttttcacccctcttcatttgaaggctttgaatgctattttgtctcaaaaacaaaggttgcaaagcgaaatgcgaacttacttagagataagaaagaaagagaagggaaatgatccagaagacatgcagaagagatataagattttgttcttgaaaatggcagtctcttttgcagacccttcccatgcagaagaatgctttcataaattaaaccaaatgaaagttaataacatttttgattcgctggctttattattggatgaaagtagagatgcccggacaaccagagacaaatttctgcagatcattggagagaagcatgaagattttgagtttttacaaacactctcctcaaaatgctcttataacatattcagctcagaacacgttcactgtgttctagattttctttccggtaacactacaggagacaagcaccttgaggcttcttgtgtccaactccttctggtaaaaagatttcttttgctctctggatctgatgaaatcaatccctttttggcgagggtctgtctggaggggactcgttcgcaggcaaaatatgctgttacagcgattgctgctttattcgatacttctaagcaattatcaagtctatgcaagaaacttgtggaatctctaattagtgagcagaacataccaacagtgctgcagtccttggggtgtcttgcacagcattctgtttcaacatttgaaagtcaagctgaagagatcactccttatatatatcagaatattttccaagtggactcttcggattatatgaattcatttgatgatgcgtctggttgtagcaactcttgcaaactgaagatatatgggctgaaaacacttgtcaagagcttcttgccacatggtggaactcgcatcaaacggcaagttaatgaactctgggacattttgtcaacaatgttgctaaagggcgaaacagttgatagtattacctcatgtgaaagtgataaggcttgtcagccttgcataagattagctgctgcaaagtctgttctccggctttctcgaaaatgggatttccatatttctccagagatatttcgccttacaatttcaatggcaaaggatgactctcctttggttagaagattatttctggataaaacacacaaactgctgaaggggcatgccatacctagcagatatgcatgtgcttttgcaatggccacctcagattgcctcaaggatctccaagatgattcattcaaatatatgacagaatttatcaaggattacagtagagaagctcaagtgcatcaaatatctggagcgcaagaaggattaatgactagttttccagcatacatagtggtattcttgatccatcttctcgctcatgataaagatttcccccatgaagattgtcaggatggagaaatatatgctcagttttgctatcctctgtttgttttattgcgggaattagtcaatgctagtaatggtgatggtgctctgggtattctcaaggattctgttttgaatttgatctgcatttttcgtgcaattaagaaagctgaggatgccattgatgttgaaaaaacttctaggctgcaccttctagcagacattggacactctttcgttacgtcaacaaatcgtaatagcctctcctcatcagatggtcctgggcaaattttgctaccttcatccttatataaatctaattctaggagccttgctcaatcatgtttcgatgagcactttgtccgaagagtagttcatatatttaaatctgatatctctttgccttcaagtactcttcctaaaagtgggcagaagtgtcaagggaatagcacaaaatctaatgttatcaagggtgacatgggcaccagtacaggacataggcaaaaacgggctctctctccaagtgctcttggagcagatggaaatggggcatctaaaaagtttgagattagtctggggaaagaagtagtttcatcttgtgattctgtagctacagaattatctctggatgatctgaatgtgaaaagaaataccactatgatgaaaaatgttaatgtgaataggagcatcgatgaggaacattccaatcatcccagtacatttaagatcacatgtgatagtagtggggatgttcaggtagtatgcttggaaactgatagcggggaaactttaactgatggctcgctgaagggaaggccgaaacaaaacaagaggacgaaagcttctgtagagacatcagtatcagaagttcttgatatgaatgacaatgctgttgccaaaagaactcgacgacaaaagaaactaaattattcaggtagtgagttcccacaggtcatcccagagtttgcactctttgcctattgcaagggatgtctggaggaggttttcaagcttagtacctctcctgctgatgatcggattaagcccgactcgttagttgagatgtttatctcacttccggagaatatatcctaccatggtcagggatcagtcccagctcctagtttatcagctggtcaggataccgcggctgccaatctttcaaaggcatcaaaatctctggtgcttgcccagttatcttgttccctcattttcaaattgatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1352

Amino Acids

151.58

Weight (kDa)

6.91

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1824
AasI GACNNNNNNGTC 1 cut(s) 80
Acc16I TGCGCA 1 cut(s) 673
Acc36I ACCTGC 1 cut(s) 677
AccB1I GGYRCC 2 cut(s) 283, 3314
AccB7I CCANNNNNTGG 2 cut(s) 1375, 2333
AccI GTMKAC 1 cut(s) 1248
AccII CGCG 1 cut(s) 3980
AccIII TCCGGA 1 cut(s) 3910
AclWI GGATC 9 cut(s) 318, 655, 1438, 1451, 1565, 1960, 2682, 2803, 3946
AcoI YGGCCR 2 cut(s) 249, 2652
AcsI RAATTY 7 cut(s) 755, 780, 1751, 2242, 2708, 2968, 3120
AcuI CTGAAG 7 cut(s) 117, 209, 1296, 2202, 2306, 2627, 3659
AdeI CACNNNGTG 1 cut(s) 2333
AfaI GTAC 4 cut(s) 3244, 3322, 3550, 3850
AfiI CCNNNNNNNGG 6 cut(s) 147, 583, 1375, 2333, 3257, 3934
AflIII ACRYGT 3 cut(s) 471, 1843, 3563
AgeI ACCGGT 1 cut(s) 1251
AhdI GACNNNNNGTC 1 cut(s) 2377
AhlI ACTAGT 1 cut(s) 2777
AjnI CCWGG 2 cut(s) 158, 3112
Alw21I GWGCWC 6 cut(s) 750, 796, 997, 2941, 3189, 3361
Alw26I GTCTC 6 cut(s) 268, 1506, 1627, 1740, 1881, 3677
AlwI GGATC 9 cut(s) 318, 655, 1438, 1451, 1565, 1960, 2682, 2803, 3946
AlwNI CAGNNNCTG 2 cut(s) 632, 656
Ama87I CYCGRG 1 cut(s) 1008
Aor13HI TCCGGA 1 cut(s) 3910
AoxI GGCC 4 cut(s) 249, 1365, 2652, 3647
ApaI GGGCCC 1 cut(s) 1369
ApeKI GCWGC 8 cut(s) 127, 592, 2036, 2125, 2465, 2468, 3037, 3983
ApoI RAATTY 7 cut(s) 755, 780, 1751, 2242, 2708, 2968, 3120
AseI ATTAAT 1 cut(s) 2771
AsiGI ACCGGT 1 cut(s) 1251
Asp700I GAANNNNTTC 6 cut(s) 959, 1191, 1311, 1656, 1845, 2213
AspLEI GCGC 3 cut(s) 674, 1007, 2761
AspS9I GGNCC 3 cut(s) 1365, 1366, 3110
AsuC2I CCSGG 2 cut(s) 1406, 1735
AsuHPI GGTGA 6 cut(s) 371, 566, 902, 1456, 2942, 3317
AvaI CYCGRG 1 cut(s) 1008
AvaII GGWCC 1 cut(s) 3110
BaeGI GKGCMC 2 cut(s) 1369, 3317
BaeI ACNNNNGTAYC 2 cut(s) 3675, 3708
BalI TGGCCA 2 cut(s) 251, 2654
BamHI GGATCC 1 cut(s) 1443
BanI GGYRCC 2 cut(s) 283, 3314
BanII GRGCYC 3 cut(s) 750, 1369, 3346
BarI GAAGNNNNNNTAC 2 cut(s) 1062, 1094
BbsI GAAGAC 1 cut(s) 1584
Bbv12I GWGCWC 6 cut(s) 750, 796, 997, 2941, 3189, 3361
BbvCI CCTCAGC 1 cut(s) 3003
BbvI GCAGC 8 cut(s) 139, 579, 2023, 2112, 2452, 2455, 3024, 3970
BceAI ACGGC 2 cut(s) 36, 2366
BciT130I CCWGG 2 cut(s) 160, 3114
BciVI GTATCC 2 cut(s) 616, 3967
BclI TGATCA 4 cut(s) 432, 522, 847, 907
BcnI CCSGG 2 cut(s) 1406, 1735
BcoDI GTCTC 6 cut(s) 268, 1506, 1627, 1740, 1881, 3677
BcuI ACTAGT 1 cut(s) 2777
BfmI CTRYAG 8 cut(s) 102, 177, 1757, 1881, 2126, 3438, 3444, 3678
BfuAI ACCTGC 1 cut(s) 677
BfuI GTATCC 2 cut(s) 616, 3967
BmcAI AGTACT 1 cut(s) 3244
Bme1390I CCNGG 4 cut(s) 160, 1406, 1735, 3114
Bme18I GGWCC 1 cut(s) 3110
BmeRI GACNNNNNGTC 1 cut(s) 2377
BmeT110I CYCGRG 1 cut(s) 1008
BmgT120I GGNCC 3 cut(s) 1365, 1366, 3110
BmiI GGNNCC 7 cut(s) 139, 285, 291, 1367, 1445, 3161, 3316
BmrFI CCNGG 4 cut(s) 160, 1406, 1735, 3114
BmrI ACTGGG 2 cut(s) 3540, 4018
BmuI ACTGGG 2 cut(s) 3540, 4018
BpiI GAAGAC 1 cut(s) 1584
BplI GAGNNNNNCTC 2 cut(s) 3151, 3183
BpmI CTGGAG 4 cut(s) 2012, 2502, 2775, 3848
Bpu10I CCTNAGC 1 cut(s) 3003
BpuEI CTTGAG 6 cut(s) 734, 816, 1919, 2654, 2721, 2936
BpuMI CCSGG 2 cut(s) 1406, 1735
Bsa29I ATCGAT 1 cut(s) 3522
BsaBI GATNNNNATC 1 cut(s) 3899
BsaJI CCNNGG 4 cut(s) 2133, 3113, 3928, 3978
BsaWI WCCGGW 4 cut(s) 286, 1251, 1871, 3910
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 6 cut(s) 147, 583, 1375, 2333, 3257, 3934
Bse118I RCCGGY 1 cut(s) 1251
Bse1I ACTGG 4 cut(s) 1445, 3318, 3546, 4024
Bse3DI GCAATG 2 cut(s) 1284, 2655
Bse8I GATNNNNATC 1 cut(s) 3899
BseAI TCCGGA 1 cut(s) 3910
BseBI CCWGG 2 cut(s) 160, 3114
BseCI ATCGAT 1 cut(s) 3522
BseDI CCNNGG 4 cut(s) 2133, 3113, 3928, 3978
BseJI GATNNNNATC 1 cut(s) 3899
BseLI CCNNNNNNNGG 6 cut(s) 147, 583, 1375, 2333, 3257, 3934
BseMI GCAATG 2 cut(s) 1284, 2655
BseMII CTCAG 9 cut(s) 255, 328, 540, 812, 1139, 1851, 2673, 2888, 2994
BseNI ACTGG 4 cut(s) 1445, 3318, 3546, 4024
BseRI GAGGAG 4 cut(s) 786, 1798, 3088, 3845
BseSI GKGCMC 2 cut(s) 1369, 3317
BseXI GCAGC 8 cut(s) 139, 579, 2023, 2112, 2452, 2455, 3024, 3970
BseYI CCCAGC 2 cut(s) 642, 3946
BsgI GTGCAG 1 cut(s) 3023
Bsh1236I CGCG 1 cut(s) 3980
BshFI GGCC 4 cut(s) 251, 1367, 2654, 3649
BshNI GGYRCC 2 cut(s) 283, 3314
BshTI ACCGGT 1 cut(s) 1251
BshVI ATCGAT 1 cut(s) 3522
BsiHKAI GWGCWC 6 cut(s) 750, 796, 997, 2941, 3189, 3361
BsiHKCI CYCGRG 1 cut(s) 1008
BsiSI CCGG 7 cut(s) 287, 1252, 1406, 1735, 1872, 2485, 3911
BslFI GGGAC 4 cut(s) 1211, 2011, 2384, 3929
BslI CCNNNNNNNGG 6 cut(s) 147, 583, 1375, 2333, 3257, 3934
BsmAI GTCTC 6 cut(s) 268, 1506, 1627, 1740, 1881, 3677
BsmFI GGGAC 4 cut(s) 1211, 2011, 2384, 3929
BsmI GAATGC 3 cut(s) 1495, 1658, 2152
BsnI GGCC 4 cut(s) 251, 1367, 2654, 3649
BsoBI CYCGRG 1 cut(s) 1008
Bsp120I GGGCCC 1 cut(s) 1365
Bsp1286I GDGCHC 9 cut(s) 750, 796, 997, 1369, 2941, 3189, 3317, 3346, 3361
Bsp13I TCCGGA 1 cut(s) 3910
Bsp19I CCATGG 1 cut(s) 3928
BspANI GGCC 4 cut(s) 251, 1367, 2654, 3649
BspCNI CTCAG 9 cut(s) 256, 327, 541, 811, 1140, 1850, 2672, 2887, 2995
BspDI ATCGAT 1 cut(s) 3522
BspEI TCCGGA 1 cut(s) 3910
BspFNI CGCG 1 cut(s) 3980
BspHI TCATGA 1 cut(s) 2824
BspLI GGNNCC 7 cut(s) 139, 285, 291, 1367, 1445, 3161, 3316
BspMAI CTGCAG 2 cut(s) 1761, 2130
BspMI ACCTGC 1 cut(s) 677
BspPI GGATC 9 cut(s) 318, 655, 1438, 1451, 1565, 1960, 2682, 2803, 3946
BspT107I GGYRCC 2 cut(s) 283, 3314
BsrDI GCAATG 2 cut(s) 1284, 2655
BsrFI RCCGGY 1 cut(s) 1251
BsrI ACTGG 4 cut(s) 1445, 3318, 3546, 4024
BssAI RCCGGY 1 cut(s) 1251
BssECI CCNNGG 4 cut(s) 2133, 3113, 3928, 3978
BssT1I CCWWGG 2 cut(s) 2133, 3928
Bst2UI CCWGG 2 cut(s) 160, 3114
Bst4CI ACNGT 7 cut(s) 106, 452, 1262, 1853, 2122, 2407, 2726
Bst6I CTCTTC 7 cut(s) 944, 1476, 1583, 2178, 2233, 3193, 3252
BstAPI GCANNNNNTGC 4 cut(s) 2018, 2277, 3124, 3806
BstC8I GCNNGC 7 cut(s) 212, 648, 1704, 2010, 2616, 3635, 4020
BstDSI CCRYGG 2 cut(s) 3928, 3978
BstFNI CGCG 1 cut(s) 3980
BstHHI GCGC 3 cut(s) 674, 1007, 2761
BstMAI GTCTC 6 cut(s) 268, 1506, 1627, 1740, 1881, 3677
BstNI CCWGG 2 cut(s) 160, 3114
BstNSI RCATGY 5 cut(s) 475, 1585, 2618, 2640, 3567
BstSCI CCNGG 4 cut(s) 158, 1404, 1733, 3112
BstSFI CTRYAG 8 cut(s) 102, 177, 1757, 1881, 2126, 3438, 3444, 3678
BstSLI GKGCMC 2 cut(s) 1369, 3317
BstUI CGCG 1 cut(s) 3980
BstV1I GCAGC 8 cut(s) 139, 579, 2023, 2112, 2452, 2455, 3024, 3970
BstV2I GAAGAC 1 cut(s) 1584
BstX2I RGATCY 4 cut(s) 310, 1443, 1952, 2674
BstYI RGATCY 4 cut(s) 310, 1443, 1952, 2674
Bsu15I ATCGAT 1 cut(s) 3522
BsuI GTATCC 2 cut(s) 616, 3967
BsuRI GGCC 4 cut(s) 251, 1367, 2654, 3649
BsuTUI ATCGAT 1 cut(s) 3522
BtgI CCRYGG 2 cut(s) 3928, 3978
BtsI GCAGTG 1 cut(s) 899
BtsIMutI CAGTG 6 cut(s) 111, 261, 899, 1438, 1849, 2127
BveI ACCTGC 1 cut(s) 677
Cac8I GCNNGC 7 cut(s) 212, 648, 1704, 2010, 2616, 3635, 4020
CaiI CAGNNNCTG 2 cut(s) 632, 656
CciI TCATGA 1 cut(s) 2824
CfoI GCGC 3 cut(s) 674, 1007, 2761
Cfr10I RCCGGY 1 cut(s) 1251
Cfr13I GGNCC 3 cut(s) 1365, 1366, 3110
Cfr42I CCGCGG 1 cut(s) 3981
ClaI ATCGAT 1 cut(s) 3522
CseI GACGC 1 cut(s) 2247
Csp6I GTAC 4 cut(s) 3243, 3321, 3549, 3849
CspAI ACCGGT 1 cut(s) 1251
CviQI GTAC 4 cut(s) 3243, 3321, 3549, 3849
DraI TTTAAA 1 cut(s) 3217
DraIII CACNNNGTG 1 cut(s) 2333
DrdI GACNNNNNNGTC 1 cut(s) 80
DriI GACNNNNNGTC 1 cut(s) 2377
DseDI GACNNNNNNGTC 1 cut(s) 80
EaeI YGGCCR 2 cut(s) 249, 2652
Eam1104I CTCTTC 7 cut(s) 944, 1476, 1583, 2178, 2233, 3193, 3252
Eam1105I GACNNNNNGTC 1 cut(s) 2377
EarI CTCTTC 7 cut(s) 944, 1476, 1583, 2178, 2233, 3193, 3252
EciI GGCGGA 2 cut(s) 38, 131
Ecl136II GAGCTC 1 cut(s) 748
Eco130I CCWWGG 2 cut(s) 2133, 3928
Eco24I GRGCYC 3 cut(s) 750, 1369, 3346
Eco32I GATATC 1 cut(s) 3226
Eco47I GGWCC 1 cut(s) 3110
Eco53kI GAGCTC 1 cut(s) 748
Eco57I CTGAAG 7 cut(s) 117, 209, 1296, 2202, 2306, 2627, 3659
Eco88I CYCGRG 1 cut(s) 1008
EcoICRI GAGCTC 1 cut(s) 748
EcoO109I RGGNCCY 1 cut(s) 1365
EcoRI GAATTC 1 cut(s) 2242
EcoRII CCWGG 2 cut(s) 158, 3112
EcoRV GATATC 1 cut(s) 3226
EcoT14I CCWWGG 2 cut(s) 2133, 3928
EcoT22I ATGCAT 1 cut(s) 2638
EcoT38I GRGCYC 3 cut(s) 750, 1369, 3346
ErhI CCWWGG 2 cut(s) 2133, 3928
FalI AAGNNNNNCTT 4 cut(s) 198, 230, 2306, 2338
FaqI GGGAC 4 cut(s) 1211, 2011, 2384, 3929
FauI CCCGC 2 cut(s) 2898, 3605
FbaI TGATCA 4 cut(s) 432, 522, 847, 907
FblI GTMKAC 1 cut(s) 1248
FriOI GRGCYC 3 cut(s) 750, 1369, 3346
FspI TGCGCA 1 cut(s) 673
GlaI GCGC 3 cut(s) 673, 1006, 2760
GsaI CCCAGC 2 cut(s) 646, 3950
GsuI CTGGAG 4 cut(s) 2012, 2502, 2775, 3848
HaeIII GGCC 4 cut(s) 251, 1367, 2654, 3649
HapII CCGG 7 cut(s) 287, 1252, 1406, 1735, 1872, 2485, 3911
HgaI GACGC 1 cut(s) 2247
HhaI GCGC 3 cut(s) 674, 1007, 2761
Hin6I GCGC 3 cut(s) 672, 1005, 2759
HinP1I GCGC 3 cut(s) 672, 1005, 2759
HincII GTYRAC 2 cut(s) 2382, 3078
HindII GTYRAC 2 cut(s) 2382, 3078
HindIII AAGCTT 4 cut(s) 329, 567, 3672, 3842
HpaII CCGG 7 cut(s) 287, 1252, 1406, 1735, 1872, 2485, 3911
HphI GGTGA 6 cut(s) 371, 566, 902, 1456, 2942, 3317
Hpy166II GTNNAC 5 cut(s) 1249, 1849, 2224, 2382, 3078
Hpy8I GTNNAC 5 cut(s) 1249, 1849, 2224, 2382, 3078
Hpy99I CGWCG 3 cut(s) 29, 83, 3744
HpyCH4III ACNGT 7 cut(s) 106, 452, 1262, 1853, 2122, 2407, 2726
HpyCH4IV ACGT 2 cut(s) 1845, 3074
HpySE526I ACGT 2 cut(s) 1845, 3074
HspAI GCGC 3 cut(s) 672, 1005, 2759
Kpn2I TCCGGA 1 cut(s) 3910
Ksp22I TGATCA 4 cut(s) 432, 522, 847, 907
KspI CCGCGG 1 cut(s) 3981
Lsp1109I GCAGC 8 cut(s) 139, 579, 2023, 2112, 2452, 2455, 3024, 3970
MaeII ACGT 2 cut(s) 1845, 3074
MaeIII GTNAC 9 cut(s) 837, 1021, 1262, 1280, 1295, 1874, 2023, 3070, 3305
MflI RGATCY 4 cut(s) 310, 1443, 1952, 2674
MhlI GDGCHC 9 cut(s) 750, 796, 997, 1369, 2941, 3189, 3317, 3346, 3361
MlsI TGGCCA 2 cut(s) 251, 2654
MluNI TGGCCA 2 cut(s) 251, 2654
MlyI GAGTC 7 cut(s) 17, 68, 270, 1993, 2219, 2552, 3875
MmeI TCCRAC 2 cut(s) 420, 1939
Mox20I TGGCCA 2 cut(s) 251, 2654
Mph1103I ATGCAT 1 cut(s) 2638
MroI TCCGGA 1 cut(s) 3910
MroXI GAANNNNTTC 6 cut(s) 959, 1191, 1311, 1656, 1845, 2213
MscI TGGCCA 2 cut(s) 251, 2654
MslI CAYNNNNRTG 2 cut(s) 266, 3491
Msp20I TGGCCA 2 cut(s) 251, 2654
MspA1I CMGCKG 2 cut(s) 3965, 3980
MspI CCGG 7 cut(s) 287, 1252, 1406, 1735, 1872, 2485, 3911
MspR9I CCNGG 4 cut(s) 160, 1406, 1735, 3114
Mva1269I GAATGC 3 cut(s) 1495, 1658, 2152
MvaI CCWGG 2 cut(s) 160, 3114
MvnI CGCG 1 cut(s) 3980
NciI CCSGG 2 cut(s) 1406, 1735
NcoI CCATGG 1 cut(s) 3928
NlaIV GGNNCC 7 cut(s) 139, 285, 291, 1367, 1445, 3161, 3316
NmuCI GTSAC 2 cut(s) 1295, 3305
NsbI TGCGCA 1 cut(s) 673
NsiI ATGCAT 1 cut(s) 2638
NspI RCATGY 5 cut(s) 475, 1585, 2618, 2640, 3567
PaeI GCATGC 1 cut(s) 2618
PaeR7I CTCGAG 1 cut(s) 1008
PagI TCATGA 1 cut(s) 2824
PciI ACATGT 2 cut(s) 471, 3563
PctI GAATGC 3 cut(s) 1495, 1658, 2152
PdmI GAANNNNTTC 6 cut(s) 959, 1191, 1311, 1656, 1845, 2213
PfeI GAWTC 8 cut(s) 960, 1043, 1312, 1697, 2090, 2687, 2957, 3434
PflFI GACNNNGTC 1 cut(s) 77
PflMI CCANNNNNTGG 2 cut(s) 1375, 2333
PinAI ACCGGT 1 cut(s) 1251
PleI GAGTC 7 cut(s) 16, 68, 270, 1993, 2219, 2552, 3875
PpsI GAGTC 7 cut(s) 16, 68, 270, 1993, 2219, 2552, 3875
PscI ACATGT 2 cut(s) 471, 3563
PshBI ATTAAT 1 cut(s) 2771
PsiI TTATAA 1 cut(s) 1824
Psp124BI GAGCTC 1 cut(s) 750
Psp6I CCWGG 2 cut(s) 158, 3112
PspFI CCCAGC 2 cut(s) 642, 3946
PspGI CCWGG 2 cut(s) 158, 3112
PspN4I GGNNCC 7 cut(s) 139, 285, 291, 1367, 1445, 3161, 3316
PspOMI GGGCCC 1 cut(s) 1365
PspPI GGNCC 3 cut(s) 1365, 1366, 3110
PspXI VCTCGAGB 1 cut(s) 1008
PsrI GAACNNNNNNTAC 4 cut(s) 1255, 1287, 3684, 3716
PstI CTGCAG 2 cut(s) 1761, 2130
PstNI CAGNNNCTG 2 cut(s) 632, 656
PsuI RGATCY 4 cut(s) 310, 1443, 1952, 2674
PsyI GACNNNGTC 1 cut(s) 77
PvuII CAGCTG 1 cut(s) 3965
RsaI GTAC 4 cut(s) 3244, 3322, 3550, 3850
RsaNI GTAC 4 cut(s) 3243, 3321, 3549, 3849
RseI CAYNNNNRTG 2 cut(s) 266, 3491
SacI GAGCTC 1 cut(s) 750
SacII CCGCGG 1 cut(s) 3981
Sau96I GGNCC 3 cut(s) 1365, 1366, 3110
ScaI AGTACT 1 cut(s) 3244
SchI GAGTC 7 cut(s) 17, 68, 270, 1993, 2219, 2552, 3875
ScrFI CCNGG 4 cut(s) 160, 1406, 1735, 3114
SduI GDGCHC 9 cut(s) 750, 796, 997, 1369, 2941, 3189, 3317, 3346, 3361
SfcI CTRYAG 8 cut(s) 102, 177, 1757, 1881, 2126, 3438, 3444, 3678
Sfr274I CTCGAG 1 cut(s) 1008
Sfr303I CCGCGG 1 cut(s) 3981
SgrBI CCGCGG 1 cut(s) 3981
SinI GGWCC 1 cut(s) 3110
SlaI CTCGAG 1 cut(s) 1008
SmiI ATTTAAAT 1 cut(s) 3217
SmiMI CAYNNNNRTG 2 cut(s) 266, 3491
SmlI CTYRAG 7 cut(s) 749, 831, 1008, 1898, 2669, 2736, 2951
SmoI CTYRAG 7 cut(s) 749, 831, 1008, 1898, 2669, 2736, 2951
SpeI ACTAGT 1 cut(s) 2777
SphI GCATGC 1 cut(s) 2618
SspI AATATT 1 cut(s) 2212
SstI GAGCTC 1 cut(s) 750
StyD4I CCNGG 4 cut(s) 158, 1404, 1733, 3112
StyI CCWWGG 2 cut(s) 2133, 3928
SwaI ATTTAAAT 1 cut(s) 3217
TaaI ACNGT 7 cut(s) 106, 452, 1262, 1853, 2122, 2407, 2726
TaiI ACGT 2 cut(s) 1848, 3077
TatI WGTACW 3 cut(s) 3242, 3320, 3548
TauI GCSGC 2 cut(s) 176, 3983
TfiI GAWTC 8 cut(s) 960, 1043, 1312, 1697, 2090, 2687, 2957, 3434
TscAI CASTG 6 cut(s) 111, 268, 906, 1445, 1856, 2127
TseFI GTSAC 2 cut(s) 1295, 3305
TseI GCWGC 8 cut(s) 127, 592, 2036, 2125, 2465, 2468, 3037, 3983
Tsp45I GTSAC 2 cut(s) 1295, 3305
TspGWI ACGGA 3 cut(s) 67, 587, 635
TspRI CASTG 6 cut(s) 111, 268, 906, 1445, 1856, 2127
Tth111I GACNNNGTC 1 cut(s) 77
Van91I CCANNNNNTGG 2 cut(s) 1375, 2333
VpaK11BI GGWCC 1 cut(s) 3110
VspI ATTAAT 1 cut(s) 2771
XapI RAATTY 7 cut(s) 755, 780, 1751, 2242, 2708, 2968, 3120
XbaI TCTAGA 1 cut(s) 1858
XceI RCATGY 5 cut(s) 475, 1585, 2618, 2640, 3567
XhoI CTCGAG 1 cut(s) 1008
XmiI GTMKAC 1 cut(s) 1248
XmnI GAANNNNTTC 6 cut(s) 959, 1191, 1311, 1656, 1845, 2213
ZrmI AGTACT 1 cut(s) 3244
Zsp2I ATGCAT 1 cut(s) 2638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.