Rh6DG367700

Sister chromatid cohesion protein PDS5 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0003552
Physical Location & Seq
Forward (+)
56384659 .. 56396953
12295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG367700.1

Sequence Viewer

Length: 2001 bp
ATGAGTCTGTTTAACACACTCTCCTCAAAATGCTCTTATAACATATTCAGCTCAGAACACGTTCGCTGTATTCTAGATTTTCTTTCCAGTAACACTACAGGAGACAAGCACCTTGAGGCTTCTTGTGTCCAACTCCTTCTGGCAATTACCAGCTTTTTCCCCACTCTCCTGAGAGGTTCCGAAACCCAATTTCAGATGTTACTACAGGGAAGCAACCCAATCAATGATAAGTTGCTTGAAGTGTTAGCCCAAGCCGGCAAGCATATATCAGTCAACCTCAGTGAAATCAATCCCTTTTTGGCGAGGGTCTGTCTGGAGGGGACTCGTTCGCAGGCAAAATATGCTGTTACAGCGATTGCTGCTTTATTCGATACTTCTAAGCAATTATCAAGTCTATGCAAGAAACTTGTGGAATCTCTAATTAGTGAGCAGAACATACCAACAGTGCTGCAGTCCTTGGGGTGTCTTGCACAGCATTCTGTTTCAACATTTGAAAGTCAAGCTGAAGAGATCACTCCTTATATATATCAGAATATTTTCCAAGTGGACTCTTCGGATTATATGAATTCATTTGATGATGCGTCTGGTTGTAGCAACTCTTGCAAACTGAAGATATATGGGCTGAAAACACTTGTCAAGAGCTTCTTGCCACATGGTGGAACTCGCATCAAACGGCAAGTTAATGAACTCTGGGACATTTTGTCAACAATGTTGCTAAAGGGCGAAACAGTTGATAGTATTACCTCATGTGAAAGTGATAAGGCTTGTCAGCCTTGTATAAGATTAGCTGCTGCAAAGTCTGTTCTCCGGCTTTCTCGAAAATGGGATTTCCATATTTCTCCAGAGATATTTCGCCTTACAATTTCAATGGCAAAGGATGACTCTCCTTTGGTTAGAAGATTATTTCTGGATAAAACACACAAACTGCTGAAGGGGCATGCTATACCTAGCAGATACGCATGTGCTTTTGCAATGGCCACCTCAGATTGCCTCAAGGATCTCCAAGATGATTCATTCAAATATATGACAGAATTTATCAAGGATTACAGTAGAGAAGCGCAAGCGCATCAAATATCTGGAGTGCAAGAAGGATTAATGACTAGTTTTCCAGCATACATAGTGGTATTCTTGATCCATCTTCTCGCTCATGATAAAGATTTCCCCCATGAAGATTGTCAGGATGGAGAAATATATGCTCAGTTTTGCTATCCTCTGTTTGTTTTATTGCGGGAATTAGTCAATGCTAGTAATGGTGATGGTGCTCTGGGTATTCTCAAGGATTCTGTCTTGAATTTGATCTGCATTTTTCGTGCAATTAAGAAAGCTGAGGATGCCATTGATGTTGAAAAAACTTCTAGGCTGCACCTTCTAGCAGACATTGGACACTCTTTCGTGACGTCAACAAATCGTAATGGCCTCTCCTCATCAGATGGTCCTGGGCAAATTTTGCTACCTTCATCCTTATATAAATCTAATTCTAGGAGCCTTGCTCAATCATGTTTCGATGAGCACTTTGTCCGAAGAGTAGTTCATATATTTAAATCTGATATCTCTTTGCCTTCAAGTACTCTTCCTAAAAGTGGGCAGAAGTGTCGAGGGAATATCACAAAATCTAATGTTATCAAGGGTGACATGGGCACCAGTACAGGACATAGGCGAAAACGGGCTTTCTCTCCAAGTGCTCTTGGAGCAGATGGAAATGGGGCATCTAAAAAGTCTGAGATTAGTCTGGGGAAAGAAGTAGTTTCATCTTGTGATTCTGTAGCTACAGAATCATCTCTGGATGATCTGAATGTGAAAAGAAATACCACTATGACGAAAAATGTTAATGTGAATAGGAGCATCGATGAGGAACATTCCAATCATCCCAGTACATTTAAGCCGAAACAGACCAAGAGGACAAAAGCTTCTGTAGAGACCTCAGTATCAGAAGTTCTTGATATGAATGACAATGCTGTTGCCAAAAGAACTCGACGACAAAAGAAACTAAATTATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

666

Amino Acids

73.73

Weight (kDa)

8.55

Isoelectric Point (pI)

49.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 2 - 490 2.2e-104 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 39
AatII GACGTC 1 cut(s) 1400
AccB1I GGYRCC 1 cut(s) 1637
AccB7I CCANNNNNTGG 1 cut(s) 656
AciI CCGC 1 cut(s) 1228
AclWI GGATC 2 cut(s) 1005, 1126
AcoI YGGCCR 1 cut(s) 975
AcsI RAATTY 4 cut(s) 565, 1031, 1291, 1443
AcuI CTGAAG 3 cut(s) 525, 629, 950
AcyI GRCGYC 1 cut(s) 1397
AdeI CACNNNGTG 1 cut(s) 656
AfaI GTAC 3 cut(s) 1567, 1645, 1873
AfiI CCNNNNNNNGG 2 cut(s) 656, 1580
AflIII ACRYGT 1 cut(s) 58
AgsI TTSAA 8 cut(s) 239, 486, 494, 867, 1018, 1291, 1346, 1563
AhdI GACNNNNNGTC 1 cut(s) 700
AhlI ACTAGT 1 cut(s) 1100
AjnI CCWGG 1 cut(s) 1435
AluBI AGCT 8 cut(s) 51, 153, 503, 642, 788, 1325, 1766, 1907
AluI AGCT 8 cut(s) 51, 153, 503, 642, 788, 1325, 1766, 1907
Alw21I GWGCWC 3 cut(s) 1264, 1512, 1684
Alw26I GTCTC 2 cut(s) 96, 1910
AlwI GGATC 2 cut(s) 1005, 1126
AoxI GGCC 2 cut(s) 975, 1414
ApeKI GCWGC 5 cut(s) 359, 448, 788, 791, 1360
ApoI RAATTY 4 cut(s) 565, 1031, 1291, 1443
AseI ATTAAT 1 cut(s) 1094
Asp700I GAANNNNTTC 2 cut(s) 60, 536
AspLEI GCGC 2 cut(s) 1060, 1066
AspS9I GGNCC 1 cut(s) 1433
AsuHPI GGTGA 2 cut(s) 1265, 1640
AvaII GGWCC 1 cut(s) 1433
BaeGI GKGCMC 1 cut(s) 1640
BaeI ACNNNNGTAYC 4 cut(s) 946, 979, 1908, 1941
BalI TGGCCA 1 cut(s) 977
BanI GGYRCC 1 cut(s) 1637
Bbv12I GWGCWC 3 cut(s) 1264, 1512, 1684
BbvCI CCTCAGC 1 cut(s) 1326
BbvI GCAGC 5 cut(s) 346, 435, 775, 778, 1347
BccI CCATC 5 cut(s) 1143, 1175, 1250, 1424, 1688
BceAI ACGGC 1 cut(s) 689
BcgI CGANNNNNNTGC 2 cut(s) 1574, 1608
BciT130I CCWGG 1 cut(s) 1437
BcoDI GTCTC 2 cut(s) 96, 1910
BcuI ACTAGT 1 cut(s) 1100
BfaI CTAG 7 cut(s) 74, 948, 1101, 1245, 1356, 1370, 1479
BfmI CTRYAG 6 cut(s) 96, 203, 449, 1761, 1767, 1911
BisI GCNGC 5 cut(s) 360, 449, 789, 792, 1361
BlsI GCNGC 5 cut(s) 361, 450, 790, 793, 1362
BmcAI AGTACT 1 cut(s) 1567
Bme1390I CCNGG 1 cut(s) 1437
Bme18I GGWCC 1 cut(s) 1433
BmeRI GACNNNNNGTC 1 cut(s) 700
BmgT120I GGNCC 1 cut(s) 1433
BmiI GGNNCC 3 cut(s) 178, 1484, 1639
BmrFI CCNGG 1 cut(s) 1437
BmrI ACTGGG 1 cut(s) 1863
BmsI GCATC 6 cut(s) 568, 675, 1075, 1321, 1715, 1851
BmuI ACTGGG 1 cut(s) 1863
BplI GAGNNNNNCTC 2 cut(s) 1474, 1506
BpmI CTGGAG 3 cut(s) 335, 825, 1098
Bpu10I CCTNAGC 1 cut(s) 1326
BpuEI CTTGAG 3 cut(s) 134, 977, 1259
Bsa29I ATCGAT 1 cut(s) 1845
BsaHI GRCGYC 1 cut(s) 1397
BsaI GGTCTC 1 cut(s) 1910
BsaJI CCNNGG 2 cut(s) 456, 1436
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 2 cut(s) 656, 1580
Bse118I RCCGGY 1 cut(s) 254
Bse1I ACTGG 3 cut(s) 87, 1641, 1869
Bse3DI GCAATG 1 cut(s) 978
BseBI CCWGG 1 cut(s) 1437
BseCI ATCGAT 1 cut(s) 1845
BseDI CCNNGG 2 cut(s) 456, 1436
BseGI GGATG 6 cut(s) 883, 1186, 1336, 1457, 1789, 1864
BseLI CCNNNNNNNGG 2 cut(s) 656, 1580
BseMI GCAATG 1 cut(s) 978
BseMII CTCAG 8 cut(s) 66, 161, 292, 996, 1211, 1317, 1710, 1935
BseNI ACTGG 3 cut(s) 87, 1641, 1869
BseRI GAGGAG 2 cut(s) 13, 1411
BseSI GKGCMC 1 cut(s) 1640
BseXI GCAGC 5 cut(s) 346, 435, 775, 778, 1347
BsgI GTGCAG 1 cut(s) 1346
BshFI GGCC 2 cut(s) 977, 1416
BshNI GGYRCC 1 cut(s) 1637
BshVI ATCGAT 1 cut(s) 1845
BsiHKAI GWGCWC 3 cut(s) 1264, 1512, 1684
BsiSI CCGG 2 cut(s) 255, 808
BslFI GGGAC 2 cut(s) 334, 707
BslI CCNNNNNNNGG 2 cut(s) 656, 1580
BsmAI GTCTC 2 cut(s) 96, 1910
BsmFI GGGAC 2 cut(s) 334, 707
BsmI GAATGC 1 cut(s) 475
BsnI GGCC 2 cut(s) 977, 1416
Bso31I GGTCTC 1 cut(s) 1910
Bsp1286I GDGCHC 4 cut(s) 1264, 1512, 1640, 1684
Bsp143I GATC 5 cut(s) 510, 997, 1131, 1296, 1786
BspACI CCGC 1 cut(s) 1228
BspANI GGCC 2 cut(s) 977, 1416
BspCNI CTCAG 8 cut(s) 65, 162, 291, 995, 1210, 1318, 1711, 1934
BspDI ATCGAT 1 cut(s) 1845
BspHI TCATGA 1 cut(s) 1147
BspLI GGNNCC 3 cut(s) 178, 1484, 1639
BspMAI CTGCAG 1 cut(s) 453
BspPI GGATC 2 cut(s) 1005, 1126
BspT107I GGYRCC 1 cut(s) 1637
BspTNI GGTCTC 1 cut(s) 1910
BsrDI GCAATG 1 cut(s) 978
BsrFI RCCGGY 1 cut(s) 254
BsrI ACTGG 3 cut(s) 87, 1641, 1869
BssAI RCCGGY 1 cut(s) 254
BssECI CCNNGG 2 cut(s) 456, 1436
BssMI GATC 5 cut(s) 510, 997, 1131, 1296, 1786
BssNI GRCGYC 1 cut(s) 1397
BssT1I CCWWGG 1 cut(s) 456
Bst2UI CCWGG 1 cut(s) 1437
Bst4CI ACNGT 3 cut(s) 445, 730, 1049
Bst6I CTCTTC 4 cut(s) 501, 556, 1516, 1575
BstACI GRCGYC 1 cut(s) 1397
BstAPI GCANNNNNTGC 3 cut(s) 341, 600, 1447
BstC8I GCNNGC 5 cut(s) 256, 260, 333, 939, 1062
BstDEI CTNAG 9 cut(s) 52, 170, 278, 378, 982, 1197, 1326, 1719, 1921
BstF5I GGATG 6 cut(s) 883, 1186, 1336, 1457, 1789, 1864
BstHHI GCGC 2 cut(s) 1060, 1066
BstKTI GATC 5 cut(s) 513, 1000, 1134, 1299, 1789
BstMAI GTCTC 2 cut(s) 96, 1910
BstMBI GATC 5 cut(s) 510, 997, 1131, 1296, 1786
BstMWI GCNNNNNNNGC 8 cut(s) 341, 350, 359, 600, 934, 1331, 1447, 1688
BstNI CCWGG 1 cut(s) 1437
BstNSI RCATGY 2 cut(s) 941, 963
BstSCI CCNGG 1 cut(s) 1435
BstSFI CTRYAG 6 cut(s) 96, 203, 449, 1761, 1767, 1911
BstSLI GKGCMC 1 cut(s) 1640
BstV1I GCAGC 5 cut(s) 346, 435, 775, 778, 1347
BstX2I RGATCY 1 cut(s) 997
BstYI RGATCY 1 cut(s) 997
Bsu15I ATCGAT 1 cut(s) 1845
BsuRI GGCC 2 cut(s) 977, 1416
BsuTUI ATCGAT 1 cut(s) 1845
BtsCI GGATG 6 cut(s) 883, 1186, 1336, 1457, 1789, 1864
BtsIMutI CAGTG 2 cut(s) 286, 450
Cac8I GCNNGC 5 cut(s) 256, 260, 333, 939, 1062
CciI TCATGA 1 cut(s) 1147
CfoI GCGC 2 cut(s) 1060, 1066
Cfr10I RCCGGY 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 1433
ClaI ATCGAT 1 cut(s) 1845
CseI GACGC 1 cut(s) 570
Csp6I GTAC 3 cut(s) 1566, 1644, 1872
CviAII CATG 8 cut(s) 653, 747, 938, 960, 1148, 1166, 1497, 1633
CviQI GTAC 3 cut(s) 1566, 1644, 1872
DdeI CTNAG 9 cut(s) 52, 170, 278, 378, 982, 1197, 1326, 1719, 1921
DpnI GATC 5 cut(s) 512, 999, 1133, 1298, 1788
DpnII GATC 5 cut(s) 510, 997, 1131, 1296, 1786
DraI TTTAAA 1 cut(s) 1540
DraIII CACNNNGTG 1 cut(s) 656
DriI GACNNNNNGTC 1 cut(s) 700
EaeI YGGCCR 1 cut(s) 975
Eam1104I CTCTTC 4 cut(s) 501, 556, 1516, 1575
Eam1105I GACNNNNNGTC 1 cut(s) 700
EarI CTCTTC 4 cut(s) 501, 556, 1516, 1575
Eco130I CCWWGG 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 1910
Eco32I GATATC 1 cut(s) 1549
Eco47I GGWCC 1 cut(s) 1433
Eco57I CTGAAG 3 cut(s) 525, 629, 950
EcoRI GAATTC 1 cut(s) 565
EcoRII CCWGG 1 cut(s) 1435
EcoRV GATATC 1 cut(s) 1549
EcoT14I CCWWGG 1 cut(s) 456
ErhI CCWWGG 1 cut(s) 456
FaeI CATG 8 cut(s) 656, 750, 941, 963, 1151, 1169, 1500, 1636
FalI AAGNNNNNCTT 2 cut(s) 629, 661
FaqI GGGAC 2 cut(s) 334, 707
FatI CATG 8 cut(s) 652, 746, 937, 959, 1147, 1165, 1496, 1632
FauI CCCGC 1 cut(s) 1221
Fnu4HI GCNGC 5 cut(s) 360, 449, 789, 792, 1361
FokI GGATG 6 cut(s) 890, 1193, 1343, 1444, 1796, 1851
Fsp4HI GCNGC 5 cut(s) 360, 449, 789, 792, 1361
FspBI CTAG 7 cut(s) 74, 948, 1101, 1245, 1356, 1370, 1479
GlaI GCGC 2 cut(s) 1059, 1065
GluI GCNGC 5 cut(s) 360, 449, 789, 792, 1361
GsuI CTGGAG 3 cut(s) 335, 825, 1098
HaeIII GGCC 2 cut(s) 977, 1416
HapII CCGG 2 cut(s) 255, 808
HgaI GACGC 1 cut(s) 570
HhaI GCGC 2 cut(s) 1060, 1066
Hin1I GRCGYC 1 cut(s) 1397
Hin1II CATG 8 cut(s) 656, 750, 941, 963, 1151, 1169, 1500, 1636
Hin6I GCGC 2 cut(s) 1058, 1064
HinP1I GCGC 2 cut(s) 1058, 1064
HincII GTYRAC 3 cut(s) 274, 705, 1401
HindII GTYRAC 3 cut(s) 274, 705, 1401
HindIII AAGCTT 1 cut(s) 1905
HinfI GANTC 9 cut(s) 4, 322, 413, 548, 881, 1010, 1280, 1757, 1772
HpaII CCGG 2 cut(s) 255, 808
HphI GGTGA 2 cut(s) 1265, 1640
Hpy166II GTNNAC 4 cut(s) 274, 547, 705, 1401
Hpy8I GTNNAC 4 cut(s) 274, 547, 705, 1401
Hpy99I CGWCG 1 cut(s) 1977
HpyAV CCTTC 6 cut(s) 146, 925, 1082, 1376, 1464, 1569
HpyCH4III ACNGT 3 cut(s) 445, 730, 1049
HpyCH4IV ACGT 2 cut(s) 60, 1397
HpyF10VI GCNNNNNNNGC 8 cut(s) 341, 350, 359, 600, 934, 1331, 1447, 1688
HpyF3I CTNAG 9 cut(s) 52, 170, 278, 378, 982, 1197, 1326, 1719, 1921
HpySE526I ACGT 2 cut(s) 60, 1397
Hsp92I GRCGYC 1 cut(s) 1397
Hsp92II CATG 8 cut(s) 656, 750, 941, 963, 1151, 1169, 1500, 1636
HspAI GCGC 2 cut(s) 1058, 1064
KroI GCCGGC 1 cut(s) 254
KroNI GCCGGC 1 cut(s) 256
Kzo9I GATC 5 cut(s) 510, 997, 1131, 1296, 1786
LmnI GCTCC 3 cut(s) 1482, 1688, 1839
Lsp1109I GCAGC 5 cut(s) 346, 435, 775, 778, 1347
LweI GCATC 6 cut(s) 568, 675, 1075, 1321, 1715, 1851
MaeI CTAG 7 cut(s) 74, 948, 1101, 1245, 1356, 1370, 1479
MaeII ACGT 2 cut(s) 60, 1397
MaeIII GTNAC 5 cut(s) 89, 198, 346, 1393, 1628
MalI GATC 5 cut(s) 512, 999, 1133, 1298, 1788
MboI GATC 5 cut(s) 510, 997, 1131, 1296, 1786
MboII GAAGA 8 cut(s) 518, 543, 622, 909, 1130, 1181, 1533, 1562
MflI RGATCY 1 cut(s) 997
MhlI GDGCHC 4 cut(s) 1264, 1512, 1640, 1684
MlsI TGGCCA 1 cut(s) 977
MluNI TGGCCA 1 cut(s) 977
MlyI GAGTC 4 cut(s) 13, 316, 542, 875
MmeI TCCRAC 1 cut(s) 154
Mox20I TGGCCA 1 cut(s) 977
MroNI GCCGGC 1 cut(s) 254
MroXI GAANNNNTTC 2 cut(s) 60, 536
MscI TGGCCA 1 cut(s) 977
MseI TTAA 7 cut(s) 12, 681, 1094, 1317, 1539, 1827, 1878
Msp20I TGGCCA 1 cut(s) 977
MspI CCGG 2 cut(s) 255, 808
MspR9I CCNGG 1 cut(s) 1437
Mva1269I GAATGC 1 cut(s) 475
MvaI CCWGG 1 cut(s) 1437
MwoI GCNNNNNNNGC 8 cut(s) 341, 350, 359, 600, 934, 1331, 1447, 1688
NaeI GCCGGC 1 cut(s) 256
NdeII GATC 5 cut(s) 510, 997, 1131, 1296, 1786
NgoMIV GCCGGC 1 cut(s) 254
NlaIII CATG 8 cut(s) 656, 750, 941, 963, 1151, 1169, 1500, 1636
NlaIV GGNNCC 3 cut(s) 178, 1484, 1639
NmuCI GTSAC 2 cut(s) 1393, 1628
NspI RCATGY 2 cut(s) 941, 963
PaeI GCATGC 1 cut(s) 941
PagI TCATGA 1 cut(s) 1147
PctI GAATGC 1 cut(s) 475
PdiI GCCGGC 1 cut(s) 256
PdmI GAANNNNTTC 2 cut(s) 60, 536
PfeI GAWTC 5 cut(s) 413, 1010, 1280, 1757, 1772
PflMI CCANNNNNTGG 1 cut(s) 656
PkrI GCNGC 5 cut(s) 361, 450, 790, 793, 1362
PleI GAGTC 4 cut(s) 12, 316, 542, 875
PpsI GAGTC 4 cut(s) 12, 316, 542, 875
PshBI ATTAAT 1 cut(s) 1094
PsiI TTATAA 1 cut(s) 39
Psp6I CCWGG 1 cut(s) 1435
PspGI CCWGG 1 cut(s) 1435
PspN4I GGNNCC 3 cut(s) 178, 1484, 1639
PspPI GGNCC 1 cut(s) 1433
PsrI GAACNNNNNNTAC 2 cut(s) 1917, 1949
PstI CTGCAG 1 cut(s) 453
PsuI RGATCY 1 cut(s) 997
RsaI GTAC 3 cut(s) 1567, 1645, 1873
RsaNI GTAC 3 cut(s) 1566, 1644, 1872
SaqAI TTAA 7 cut(s) 12, 681, 1094, 1317, 1539, 1827, 1878
SatI GCNGC 5 cut(s) 360, 449, 789, 792, 1361
Sau3AI GATC 5 cut(s) 510, 997, 1131, 1296, 1786
Sau96I GGNCC 1 cut(s) 1433
ScaI AGTACT 1 cut(s) 1567
SchI GAGTC 4 cut(s) 13, 316, 542, 875
ScrFI CCNGG 1 cut(s) 1437
SduI GDGCHC 4 cut(s) 1264, 1512, 1640, 1684
SfaNI GCATC 6 cut(s) 568, 675, 1075, 1321, 1715, 1851
SfcI CTRYAG 6 cut(s) 96, 203, 449, 1761, 1767, 1911
SinI GGWCC 1 cut(s) 1433
SmiI ATTTAAAT 1 cut(s) 1540
SmlI CTYRAG 3 cut(s) 113, 992, 1274
SmoI CTYRAG 3 cut(s) 113, 992, 1274
SpeI ACTAGT 1 cut(s) 1100
SphI GCATGC 1 cut(s) 941
SsiI CCGC 1 cut(s) 1228
SspI AATATT 1 cut(s) 535
SspMI CTAG 7 cut(s) 74, 948, 1101, 1245, 1356, 1370, 1479
StyD4I CCNGG 1 cut(s) 1435
StyI CCWWGG 1 cut(s) 456
SwaI ATTTAAAT 1 cut(s) 1540
TaaI ACNGT 3 cut(s) 445, 730, 1049
TaiI ACGT 2 cut(s) 63, 1400
TaqI TCGA 6 cut(s) 369, 817, 1503, 1594, 1845, 1972
TatI WGTACW 3 cut(s) 1565, 1643, 1871
TfiI GAWTC 5 cut(s) 413, 1010, 1280, 1757, 1772
Tru1I TTAA 7 cut(s) 12, 681, 1094, 1317, 1539, 1827, 1878
Tru9I TTAA 7 cut(s) 12, 681, 1094, 1317, 1539, 1827, 1878
TscAI CASTG 2 cut(s) 286, 450
TseFI GTSAC 2 cut(s) 1393, 1628
TseI GCWGC 5 cut(s) 359, 448, 788, 791, 1360
Tsp45I GTSAC 2 cut(s) 1393, 1628
TspDTI ATGAA 9 cut(s) 558, 578, 699, 1002, 1182, 1446, 1520, 1737, 1958
TspRI CASTG 2 cut(s) 286, 450
Van91I CCANNNNNTGG 1 cut(s) 656
VpaK11BI GGWCC 1 cut(s) 1433
VspI ATTAAT 1 cut(s) 1094
XapI RAATTY 4 cut(s) 565, 1031, 1291, 1443
XbaI TCTAGA 1 cut(s) 73
XceI RCATGY 2 cut(s) 941, 963
XmnI GAANNNNTTC 2 cut(s) 60, 536
XspI CTAG 7 cut(s) 74, 948, 1101, 1245, 1356, 1370, 1479
ZraI GACGTC 1 cut(s) 1398
ZrmI AGTACT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.