Rmu_sc0029873.1_g000001

Mitochondrial fission protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0029873.1
OG0016966
Physical Location & Seq
Reverse (-)
1 .. 1738
1738 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0029873.1_g000001.1.cds

Sequence Viewer

Length: 322 bp
atgggttttggatttgatgattcttcaagctcggtgattcttcaactcttcactcttgttaagtttctggttgaagtatcgagctcgtggtcaactggtcttgctcttggagtcttggttcgattcagaaatcttcaagctcaggatccaaaggaggaggctaaatcagagacaagggattggataaacactgcggttctcaccattggatctctttatcaggatgattctgctgcacttaggagtactgcttcagcctggcacgctgaactggcaccgctcccgaagcccttgcttgtagtcaatataggaggcccttctg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_fiss_Elm1

Protein Analysis

107

Amino Acids

11.54

Weight (kDa)

4.9

Isoelectric Point (pI)

57.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 274
AccBSI CCGCTC 1 cut(s) 280
AciI CCGC 2 cut(s) 194, 278
AclWI GGATC 3 cut(s) 140, 153, 217
AcuI CTGAAG 1 cut(s) 237
AfaI GTAC 1 cut(s) 247
AgsI TTSAA 4 cut(s) 27, 44, 74, 137
AjnI CCWGG 1 cut(s) 257
AloI GAACNNNNNNTCC 2 cut(s) 102, 134
AluBI AGCT 3 cut(s) 30, 84, 140
AluI AGCT 3 cut(s) 30, 84, 140
Alw21I GWGCWC 1 cut(s) 86
Alw26I GTCTC 1 cut(s) 164
AlwI GGATC 3 cut(s) 140, 153, 217
AoxI GGCC 1 cut(s) 313
ApeKI GCWGC 1 cut(s) 233
AspS9I GGNCC 1 cut(s) 314
AsuHPI GGTGA 2 cut(s) 46, 193
BamHI GGATCC 1 cut(s) 145
BanI GGYRCC 1 cut(s) 274
BanII GRGCYC 1 cut(s) 86
BauI CACGAG 1 cut(s) 85
Bbv12I GWGCWC 1 cut(s) 86
BbvI GCAGC 1 cut(s) 220
BcgI CGANNNNNNTGC 2 cut(s) 274, 308
BciT130I CCWGG 1 cut(s) 259
BcoDI GTCTC 1 cut(s) 164
BisI GCNGC 1 cut(s) 234
BlsI GCNGC 1 cut(s) 235
BmcAI AGTACT 1 cut(s) 247
Bme1390I CCNGG 1 cut(s) 259
BmgT120I GGNCC 1 cut(s) 314
BmiI GGNNCC 2 cut(s) 147, 276
BmrFI CCNGG 1 cut(s) 259
Bpu10I CCTNAGC 1 cut(s) 141
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bse1I ACTGG 2 cut(s) 100, 276
BseBI CCWGG 1 cut(s) 259
BseGI GGATG 1 cut(s) 229
BseMII CTCAG 1 cut(s) 155
BseNI ACTGG 2 cut(s) 100, 276
BseRI GAGGAG 1 cut(s) 170
BseXI GCAGC 1 cut(s) 220
BsgI GTGCAG 1 cut(s) 219
BshFI GGCC 1 cut(s) 315
BshNI GGYRCC 1 cut(s) 274
BsiHKAI GWGCWC 1 cut(s) 86
BsmAI GTCTC 1 cut(s) 164
BsnI GGCC 1 cut(s) 315
Bsp1286I GDGCHC 1 cut(s) 86
Bsp143I GATC 2 cut(s) 145, 209
BspACI CCGC 2 cut(s) 194, 278
BspANI GGCC 1 cut(s) 315
BspCNI CTCAG 1 cut(s) 154
BspLI GGNNCC 2 cut(s) 147, 276
BspPI GGATC 3 cut(s) 140, 153, 217
BspT107I GGYRCC 1 cut(s) 274
BsrBI CCGCTC 1 cut(s) 280
BsrI ACTGG 2 cut(s) 100, 276
BssMI GATC 2 cut(s) 145, 209
BssSI CACGAG 1 cut(s) 85
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 1 cut(s) 259
Bst6I CTCTTC 1 cut(s) 53
BstC8I GCNNGC 1 cut(s) 264
BstDEI CTNAG 2 cut(s) 141, 239
BstF5I GGATG 1 cut(s) 229
BstKTI GATC 2 cut(s) 148, 212
BstMAI GTCTC 1 cut(s) 164
BstMBI GATC 2 cut(s) 145, 209
BstMWI GCNNNNNNNGC 3 cut(s) 263, 272, 286
BstNI CCWGG 1 cut(s) 259
BstSCI CCNGG 1 cut(s) 257
BstV1I GCAGC 1 cut(s) 220
BstX2I RGATCY 2 cut(s) 145, 209
BstYI RGATCY 2 cut(s) 145, 209
BsuRI GGCC 1 cut(s) 315
BtsCI GGATG 1 cut(s) 229
BtsI GCAGTG 1 cut(s) 189
BtsIMutI CAGTG 1 cut(s) 189
Cac8I GCNNGC 1 cut(s) 264
Cfr13I GGNCC 1 cut(s) 314
Csp6I GTAC 1 cut(s) 246
CviJI RGCY 7 cut(s) 30, 84, 140, 161, 257, 289, 315
CviKI_1 RGCY 7 cut(s) 30, 84, 140, 161, 257, 289, 315
CviQI GTAC 1 cut(s) 246
DdeI CTNAG 2 cut(s) 141, 239
DpnI GATC 2 cut(s) 147, 211
DpnII GATC 2 cut(s) 145, 209
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
Ecl136II GAGCTC 1 cut(s) 84
Eco24I GRGCYC 1 cut(s) 86
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 237
EcoICRI GAGCTC 1 cut(s) 84
EcoO109I RGGNCCY 1 cut(s) 314
EcoRII CCWGG 1 cut(s) 257
EcoT38I GRGCYC 1 cut(s) 86
FaiI YATR 1 cut(s) 308
Fnu4HI GCNGC 1 cut(s) 234
FokI GGATG 1 cut(s) 236
FriOI GRGCYC 1 cut(s) 86
Fsp4HI GCNGC 1 cut(s) 234
GluI GCNGC 1 cut(s) 234
HaeIII GGCC 1 cut(s) 315
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HinfI GANTC 5 cut(s) 20, 37, 111, 123, 227
HphI GGTGA 2 cut(s) 46, 193
Hpy166II GTNNAC 1 cut(s) 93
Hpy188I TCNGA 2 cut(s) 128, 169
Hpy188III TCNNGA 3 cut(s) 143, 221, 283
Hpy8I GTNNAC 1 cut(s) 93
HpyCH4V TGCA 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 272, 286
HpyF3I CTNAG 2 cut(s) 141, 239
Kzo9I GATC 2 cut(s) 145, 209
LmnI GCTCC 1 cut(s) 285
LpnPI CCDG 7 cut(s) 53, 81, 128, 206, 244, 257, 271
Lsp1109I GCAGC 1 cut(s) 220
MalI GATC 2 cut(s) 147, 211
MbiI CCGCTC 1 cut(s) 280
MboI GATC 2 cut(s) 145, 209
MboII GAAGA 4 cut(s) 15, 32, 40, 125
MflI RGATCY 2 cut(s) 145, 209
MhlI GDGCHC 1 cut(s) 86
MlyI GAGTC 1 cut(s) 120
MnlI CCTC 3 cut(s) 148, 151, 305
MseI TTAA 1 cut(s) 60
MspR9I CCNGG 1 cut(s) 259
MvaI CCWGG 1 cut(s) 259
MwoI GCNNNNNNNGC 3 cut(s) 263, 272, 286
NdeII GATC 2 cut(s) 145, 209
NlaIV GGNNCC 2 cut(s) 147, 276
PfeI GAWTC 4 cut(s) 20, 37, 123, 227
PkrI GCNGC 1 cut(s) 235
PleI GAGTC 1 cut(s) 119
PpsI GAGTC 1 cut(s) 119
Psp124BI GAGCTC 1 cut(s) 86
Psp6I CCWGG 1 cut(s) 257
PspGI CCWGG 1 cut(s) 257
PspN4I GGNNCC 2 cut(s) 147, 276
PspPI GGNCC 1 cut(s) 314
PsuI RGATCY 2 cut(s) 145, 209
RsaI GTAC 1 cut(s) 247
RsaNI GTAC 1 cut(s) 246
SacI GAGCTC 1 cut(s) 86
SaqAI TTAA 1 cut(s) 60
SatI GCNGC 1 cut(s) 234
Sau3AI GATC 2 cut(s) 145, 209
Sau96I GGNCC 1 cut(s) 314
ScaI AGTACT 1 cut(s) 247
SchI GAGTC 1 cut(s) 120
ScrFI CCNGG 1 cut(s) 259
SduI GDGCHC 1 cut(s) 86
SetI ASST 3 cut(s) 32, 86, 142
SsiI CCGC 2 cut(s) 194, 278
SstI GAGCTC 1 cut(s) 86
StyD4I CCNGG 1 cut(s) 257
TaqI TCGA 2 cut(s) 80, 121
TatI WGTACW 1 cut(s) 245
TfiI GAWTC 4 cut(s) 20, 37, 123, 227
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TscAI CASTG 1 cut(s) 196
TseI GCWGC 1 cut(s) 233
TspRI CASTG 1 cut(s) 196
ZrmI AGTACT 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.