Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003273

Physical Location & Seq

Genomic Coordinates Reverse (-)

29430965 .. 29439759

Gene Structure 8795 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0260900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGATGAATGATGCTGGCCGGAATGGTGGTGGTGTTTCCCGCCATGCCAAGACCAACGGCTTCATTCCAAGCTCGTTTCGGGCCCTTTCGAGTTATCTGAGAATTGTTTCATCTGGGGCTTCAACTGTTGCCAGGTCGGCGGTGTCGGTGGCCTCTTCTATTGGGGAGAGGGATAATGATGCCAACCATGATCAGGTAAACTGGGCTGGATTTGACAAGTTAGAGGGGGAGGGAAATGTCTACCGGAAAGTTCTTCTGCTGGGTTACCGCTCTGGTTTCCAGGTTTGGGATGTTGAAGAAGCAGATAATGTGCGTGACCTGGTTTCCACACATGATGGTCCTATTTCATTTATGCAAATGCTACCTAAACCAATAGCATCAAAGAGATCGGATGACAAGTTTGCTGAAAGCCGTCCATTGCTGGTAGTTTGTGCTGATGGGTCAATTTCTGTTGATAATAACATAGAGGATGGCACTGCCCCTCGCAATGGTGTTACTACAAACAGCCATGACAAAGTGAACAGTAGTTTTGTGCCTACTGCTGTTCGGTTCTATTCCTTGAGATCCCAATCCTATGTTCATGTGCTGAAGTTCAGATCAGCTATTTATTCTGTAAAGTGCAGTTCTCGAGTTGTTGCTATTTCTCAAGCAACTCAGATACACTGTTTTGATGCAACAACGTTGGAGCGGGAATATACTATTCTCACCAATCCTATAGTTACGGGATTCCCTGGTTCTGGAGGTATAAGCTGTGGACCTGTTGCAGTAGGCAAGAGATGGCTAGCTTATAGTGGAAGTCCTGTTGCAGTAACCAATTCTGGGCGCGTTAATCCACAACATCTGGCACCTTCCGCTAGTTTTCCTTCAAATGGGAGCCTGGTTGCTCACTATGCAAAAGAGTCAAGCAAGCAACTAGCTGCTGGGATTGCGACCTTGGGAGACATGGGGTATAAGAAGCTGTCCCAGTACTACTCGGAGCTTGTACCTGATGGTATTACTTATCCTCAGTCAGGGAATCCTGGCCGGAAAGCCAATGGAACTGTCAATGGCCAGTCAACAGACACAGATAGTGTTGGAATGGTCATTGTCAGAGACATTGTCAGTAAAGCTGTTATTGCACAGTTCAGGGCTCACCAGAGTCCTATTTCTGCATTATGCTTTGATCCTAGTGGCACGCTTTTAGTGTCTGCTTCGGTTCAGGGGCATAACATCAATGTTTTTAAGATAATGCCTGGACCTCCTGGAGTCTCCTCTTCAACTGATGCTGATGCATCTCATGTACATCTTTACAGGCTACAGCGCGGAATGACTCATGCAATTATTCAGGACATTAGTTTCAGTGATGACAGCAACTGGATTATGGTTAGTTCCTCTAGGGGGACCAGCCATCTGTTTGCTATAAATCCTTGGGGAGGAACTGTTGATATTCCAAATTCTGATGCTAGCTTTAATCCAAAAAATACTGTATCAGGTGTCACAACTAGGTCAGCAGTTCGTTGGCCACCTAATTCAGGTTCGCAAATGCCTAATCAGCAGAGCCTCTGTTCATCTGGTCCCCCAGTTACACTTTCTGTTGTTAGTAGAATAAGAAATGGAAACAATAGCTGGAGAGGCACTGTAACTGGTGCTGCGGCCGCCGCCACTGGCAAGATGAATTCCCTCTCTGGGGCAATTGCTTCCTCTTTCCATAATTGCAAAGGCAATGATTACCATGTGGATTCCAGCTCTTTGAAGGCTAAGTACCACCTTTTGGTATTTTCTCCATCTGGTTGCATGATACAATATGCATTGCGAATACCAAATGGTCTAGATTTAACAACTGTGACTGGATTAAACACTGCTTATGAGTCAGATCACGAGTGTGATGCAAGATTAGTAGTTGAAGCTATCCAGAAGTGGAACGTATGTCAGAAGCAGAACCGAAGAGAACGGGAGGATAATACTGACATATATGGTGAGAATGGAAATTTAGACAACAATAAGATATATCCTGAAGGGATGAAGAAGGGAAACACGGTATATCCTGAAGCTTGGAGTTCTGTCACAAAAGAAAAGATCACCCCTGAGGAAAAACATCATTTGTATATTTCAGAAGCCGAACTGCAGATGCATGAAACTCGAAGTCCACTATGGGCAAGACTTGAGCTATACTTTCAGTCAATGATTGTGGAAGGTGTGAAGATGGATGGTGAAACTGCTACAGGAGGAGAAATTGAGATTGAAAGGATTCCGACTCGCATGATTGAAGCAAGGTCAAAGGATTTAGTCCCAGTTTTTGACTATCTTCAGACTCCAGTGTTCCAACAAACAAGCAATATCAGTGGGCAACTTCTTCAACAGAGGTCTGGGATATCTGAAAAGGGCAGGCTTTCATGCAGAAGCAGTTCAAACTCTCTTGATACCATGACTGACAGCGGTGCTGGACTCGCAGAACATCGCAGTGGTAGTGAAGAAACTGGGTGGGGTGTTCCTCAGATGACAATAGGAAGCACGGGCTCTGTAAATAAAAATGACAGCCCAGAGACAAAGACTCAGCTTGAGACTGTAAATAGTAGAGAGCACGGCTTTAAAATGGATGCTCAACTCAAGTTTGTAAATAATGACATAGAAGAAGACATGGGAATGGGGAATCTTTTTGAACAGGGAGGTGATGAGTGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

887

Amino Acids

95.98

Weight (kDa)

6.24

Isoelectric Point (pI)

45.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BCAS3_WD40	PF21034	65 - 473	1.6e-49	BCAS3, WD40 repeat
PROPPIN	PF21032	359 - 468	6.5e-06	PROPPIN
BCAS3	PF12490	615 - 760	2.4e-54	BCAS3 microtubule associated cell migration factor, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003273)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g02430 FvH4_6g16680 FvH4_6g16682 FvH4_6g16682 FvH4_6g16682 FvH4_6g16690
malus_domestica	MD00G1067900.v1.1 MD03G1165000.v1.1
prunus_persica	Prupe.4G263400_v2.0.a1 Prupe.4G263500_v2.0.a1 Prupe.4G264600_v2.0.a1 Prupe.7G126600_v2.0.a1
pyrus_communis	pycom03g11960 pycom12g08900
rosa_chinensis	RchiOBHm_Chr3g0470641 RchiOBHm_Chr5g0050381
rosa_laevigata	RLG00000024251 RLG00000034701
rosa_multiflora	Rmu_co8293285.1_g000001 Rmu_co8361179.1_g000001 Rmu_sc0002115.1_g000025 Rmu_sc0005060.1_g000019 Rmu_sc0030351.1_g000001
rosa_roxburghii	Rroxscaffold_1G00030530 Rroxscaffold_6G00410640
rosa_rugosa	Rorug03G0111200 Rorug05G0260900
rosa_samantha	Rh3AG160900 Rh3BG185500 Rh3CG175800 Rh3DG189300 Rh5AG332300 Rh5BG342600 Rh5CG369800 Rh5DG355400
rosa_wichuraiana	Rw3G015220 Rw5G031410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	844
AccB7I	CCANNNNNTGG	1 cut(s)	1750
AccBSI	CCGCTC	2 cut(s)	270, 688
AccI	GTMKAC	1 cut(s)	240
AccII	CGCG	2 cut(s)	825, 1302
AclI	AACGTT	1 cut(s)	680
AclWI	GGATC	2 cut(s)	558, 1157
AcoI	YGGCCR	5 cut(s)	16, 1021, 1048, 1499, 1632
AcsI	RAATTY	3 cut(s)	1432, 1654, 1966
AcuI	CTGAAG	4 cut(s)	608, 2013, 2046, 2270
AfaI	GTAC	4 cut(s)	968, 984, 1281, 1742
AjnI	CCWGG	8 cut(s)	131, 279, 318, 730, 876, 1018, 1231, 1240
AjuI	GAANNNNNNNTTGG	2 cut(s)	561, 593
AleI	CACNNNNGTG	1 cut(s)	1860
Alw21I	GWGCWC	1 cut(s)	2562
Alw26I	GTCTC	5 cut(s)	933, 1086, 1252, 2516, 2534
AlwI	GGATC	2 cut(s)	558, 1157
AlwNI	CAGNNNCTG	1 cut(s)	1353
Ama87I	CYCGRG	1 cut(s)	627
AoxI	GGCC	7 cut(s)	16, 81, 150, 1021, 1048, 1499, 1632
ApaI	GGGCCC	1 cut(s)	85
ApeKI	GCWGC	2 cut(s)	917, 1628
ApoI	RAATTY	3 cut(s)	1432, 1654, 1966
Asp700I	GAANNNNTTC	3 cut(s)	106, 2226, 2383
AspLEI	GCGC	2 cut(s)	825, 1302
AspS9I	GGNCC	7 cut(s)	81, 82, 338, 755, 1235, 1380, 1553
AsuHPI	GGTGA	6 cut(s)	697, 1124, 1967, 2050, 2201, 2660
AsuNHI	GCTAGC	2 cut(s)	781, 1442
AvaI	CYCGRG	1 cut(s)	627
AvaII	GGWCC	5 cut(s)	338, 755, 1235, 1380, 1553
AxyI	CCTNAGG	1 cut(s)	2064
BaeGI	GKGCMC	1 cut(s)	85
BalI	TGGCCA	2 cut(s)	1050, 1501
BanI	GGYRCC	1 cut(s)	844
BanII	GRGCYC	3 cut(s)	85, 1132, 2498
BarI	GAAGNNNNNNTAC	2 cut(s)	1724, 1756
BauI	CACGAG	1 cut(s)	1856
BbsI	GAAGAC	1 cut(s)	2619
Bbv12I	GWGCWC	1 cut(s)	2562
BbvI	GCAGC	2 cut(s)	904, 1615
BccI	CCATC	9 cut(s)	329, 431, 464, 771, 983, 1395, 1771, 2176, 2180
BceAI	ACGGC	3 cut(s)	73, 396, 2578
BcgI	CGANNNNNNTGC	4 cut(s)	1847, 1881, 2099, 2133
BciT130I	CCWGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
BclI	TGATCA	1 cut(s)	190
BcoDI	GTCTC	5 cut(s)	933, 1086, 1252, 2516, 2534
BfaI	CTAG	8 cut(s)	782, 855, 914, 1167, 1374, 1443, 1482, 1808
BfmI	CTRYAG	4 cut(s)	714, 1295, 2102, 2199
BglI	GCCNNNNNGGC	1 cut(s)	137
BisI	GCNGC	5 cut(s)	918, 1629, 1632, 1635, 1638
BlsI	GCNGC	5 cut(s)	919, 1630, 1633, 1636, 1639
BmcAI	AGTACT	1 cut(s)	968
Bme1390I	CCNGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
Bme18I	GGWCC	5 cut(s)	338, 755, 1235, 1380, 1553
BmeT110I	CYCGRG	1 cut(s)	627
BmgT120I	GGNCC	7 cut(s)	81, 82, 338, 755, 1235, 1380, 1553
BmiI	GGNNCC	5 cut(s)	83, 846, 875, 1381, 1555
BmrFI	CCNGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
BmrI	ACTGGG	5 cut(s)	211, 958, 1553, 2264, 2466
BmtI	GCTAGC	2 cut(s)	785, 1446
BmuI	ACTGGG	5 cut(s)	211, 958, 1553, 2264, 2466
BpiI	GAAGAC	1 cut(s)	2619
BpmI	CTGGAG	4 cut(s)	759, 1263, 1627, 2277
BpuEI	CTTGAG	5 cut(s)	580, 630, 2162, 2558, 2570
BsaBI	GATNNNNATC	1 cut(s)	568
BsaJI	CCNNGG	3 cut(s)	730, 933, 1406
BsaWI	WCCGGW	1 cut(s)	243
BsaXI	ACNNNNNCTCC	2 cut(s)	1404, 1434
Bse21I	CCTNAGG	1 cut(s)	2064
Bse3DI	GCAATG	4 cut(s)	416, 493, 1708, 1787
Bse8I	GATNNNNATC	1 cut(s)	568
BseBI	CCWGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
BseDI	CCNNGG	3 cut(s)	730, 933, 1406
BseGI	GGATG	6 cut(s)	295, 397, 475, 2004, 2191, 2581
BseJI	GATNNNNATC	1 cut(s)	568
BseMI	GCAATG	4 cut(s)	416, 493, 1708, 1787
BseMII	CTCAG	6 cut(s)	89, 668, 1019, 2055, 2486, 2546
BseRI	GAGGAG	2 cut(s)	1240, 2220
BseSI	GKGCMC	1 cut(s)	85
BseX3I	CGGCCG	1 cut(s)	1632
BseXI	GCAGC	2 cut(s)	904, 1615
BseYI	CCCAGC	2 cut(s)	259, 920
BsgI	GTGCAG	1 cut(s)	640
Bsh1236I	CGCG	2 cut(s)	825, 1302
Bsh1285I	CGRYCG	1 cut(s)	1635
BshFI	GGCC	7 cut(s)	18, 83, 152, 1023, 1050, 1501, 1634
BshNI	GGYRCC	1 cut(s)	844
BsiEI	CGRYCG	1 cut(s)	1635
BsiHKAI	GWGCWC	1 cut(s)	2562
BsiHKCI	CYCGRG	1 cut(s)	627
BsiSI	CCGG	3 cut(s)	19, 244, 1024
BslFI	GGGAC	4 cut(s)	946, 1393, 1539, 2252
BsmAI	GTCTC	5 cut(s)	933, 1086, 1252, 2516, 2534
BsmFI	GGGAC	4 cut(s)	946, 1393, 1539, 2252
BsnI	GGCC	7 cut(s)	18, 83, 152, 1023, 1050, 1501, 1634
BsoBI	CYCGRG	1 cut(s)	627
Bsp120I	GGGCCC	1 cut(s)	81
Bsp1286I	GDGCHC	4 cut(s)	85, 1132, 2498, 2562
Bsp1407I	TGTACA	1 cut(s)	1279
Bsp143I	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
BspANI	GGCC	7 cut(s)	18, 83, 152, 1023, 1050, 1501, 1634
BspCNI	CTCAG	6 cut(s)	90, 667, 1018, 2056, 2485, 2545
BspFNI	CGCG	2 cut(s)	825, 1302
BspLI	GGNNCC	5 cut(s)	83, 846, 875, 1381, 1555
BspMAI	CTGCAG	1 cut(s)	2106
BspOI	GCTAGC	2 cut(s)	785, 1446
BspPI	GGATC	2 cut(s)	558, 1157
BspT107I	GGYRCC	1 cut(s)	844
BsrBI	CCGCTC	2 cut(s)	270, 688
BsrDI	GCAATG	4 cut(s)	416, 493, 1708, 1787
BsrGI	TGTACA	1 cut(s)	1279
BssECI	CCNNGG	3 cut(s)	730, 933, 1406
BssMI	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
BssSI	CACGAG	1 cut(s)	1856
BssT1I	CCWWGG	2 cut(s)	933, 1406
Bst2BI	CACGAG	1 cut(s)	1856
Bst2UI	CCWGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
Bst6I	CTCTTC	3 cut(s)	160, 1258, 1918
BstAUI	TGTACA	1 cut(s)	1279
BstC8I	GCNNGC	6 cut(s)	16, 783, 908, 1175, 1444, 2366
BstDEI	CTNAG	7 cut(s)	98, 654, 1005, 1737, 2064, 2472, 2532
BstEII	GGTNACC	1 cut(s)	263
BstENI	CCTNNNNNAGG	3 cut(s)	1008, 1410, 1509
BstF5I	GGATG	6 cut(s)	295, 397, 475, 2004, 2191, 2581
BstFNI	CGCG	2 cut(s)	825, 1302
BstHHI	GCGC	2 cut(s)	825, 1302
BstKTI	GATC	7 cut(s)	193, 389, 566, 599, 1165, 1855, 2058
BstMAI	GTCTC	5 cut(s)	933, 1086, 1252, 2516, 2534
BstMBI	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
BstMCI	CGRYCG	1 cut(s)	1635
BstNI	CCWGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
BstPI	GGTNACC	1 cut(s)	263
BstSCI	CCNGG	8 cut(s)	131, 279, 318, 730, 876, 1018, 1231, 1240
BstSFI	CTRYAG	4 cut(s)	714, 1295, 2102, 2199
BstSLI	GKGCMC	1 cut(s)	85
BstUI	CGCG	2 cut(s)	825, 1302
BstV1I	GCAGC	2 cut(s)	904, 1615
BstV2I	GAAGAC	1 cut(s)	2619
BstX2I	RGATCY	1 cut(s)	563
BstYI	RGATCY	1 cut(s)	563
BstZI	CGGCCG	1 cut(s)	1632
Bsu36I	CCTNAGG	1 cut(s)	2064
BsuRI	GGCC	7 cut(s)	18, 83, 152, 1023, 1050, 1501, 1634
BtgZI	GCGATG	1 cut(s)	2420
BtsCI	GGATG	6 cut(s)	295, 397, 475, 2004, 2191, 2581
BtsI	GCAGTG	3 cut(s)	474, 1836, 2446
BtsIMutI	CAGTG	9 cut(s)	474, 661, 1345, 1614, 1641, 1836, 2301, 2326, 2446
Cac8I	GCNNGC	6 cut(s)	16, 783, 908, 1175, 1444, 2366
CaiI	CAGNNNCTG	1 cut(s)	1353
CciNI	GCGGCCGC	1 cut(s)	1632
CfoI	GCGC	2 cut(s)	825, 1302
Cfr13I	GGNCC	7 cut(s)	81, 82, 338, 755, 1235, 1380, 1553
CsiI	ACCWGGT	1 cut(s)	318
Csp6I	GTAC	4 cut(s)	967, 983, 1280, 1741
CspCI	CAANNNNNGTGG	4 cut(s)	2148, 2183, 2302, 2337
CviQI	GTAC	4 cut(s)	967, 983, 1280, 1741
DdeI	CTNAG	7 cut(s)	98, 654, 1005, 1737, 2064, 2472, 2532
DpnI	GATC	7 cut(s)	192, 388, 565, 598, 1164, 1854, 2057
DpnII	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
DraI	TTTAAA	1 cut(s)	2569
EaeI	YGGCCR	5 cut(s)	16, 1021, 1048, 1499, 1632
EagI	CGGCCG	1 cut(s)	1632
Eam1104I	CTCTTC	3 cut(s)	160, 1258, 1918
EarI	CTCTTC	3 cut(s)	160, 1258, 1918
EclXI	CGGCCG	1 cut(s)	1632
Eco130I	CCWWGG	2 cut(s)	933, 1406
Eco24I	GRGCYC	3 cut(s)	85, 1132, 2498
Eco32I	GATATC	1 cut(s)	2352
Eco47I	GGWCC	5 cut(s)	338, 755, 1235, 1380, 1553
Eco52I	CGGCCG	1 cut(s)	1632
Eco57I	CTGAAG	4 cut(s)	608, 2013, 2046, 2270
Eco81I	CCTNAGG	1 cut(s)	2064
Eco88I	CYCGRG	1 cut(s)	627
Eco91I	GGTNACC	1 cut(s)	263
EcoNI	CCTNNNNNAGG	3 cut(s)	1008, 1410, 1509
EcoO109I	RGGNCCY	1 cut(s)	82
EcoO65I	GGTNACC	1 cut(s)	263
EcoRI	GAATTC	1 cut(s)	1654
EcoRII	CCWGG	8 cut(s)	131, 279, 318, 730, 876, 1018, 1231, 1240
EcoRV	GATATC	1 cut(s)	2352
EcoT14I	CCWWGG	2 cut(s)	933, 1406
EcoT22I	ATGCAT	3 cut(s)	1273, 1789, 2112
EcoT38I	GRGCYC	3 cut(s)	85, 1132, 2498
ErhI	CCWWGG	2 cut(s)	933, 1406
FaqI	GGGAC	4 cut(s)	946, 1393, 1539, 2252
FauI	CCCGC	2 cut(s)	47, 681
FbaI	TGATCA	1 cut(s)	190
FblI	GTMKAC	1 cut(s)	240
Fnu4HI	GCNGC	5 cut(s)	918, 1629, 1632, 1635, 1638
FokI	GGATG	6 cut(s)	302, 404, 482, 2011, 2198, 2588
FriOI	GRGCYC	3 cut(s)	85, 1132, 2498
Fsp4HI	GCNGC	5 cut(s)	918, 1629, 1632, 1635, 1638
FspBI	CTAG	8 cut(s)	782, 855, 914, 1167, 1374, 1443, 1482, 1808
GlaI	GCGC	2 cut(s)	824, 1301
GluI	GCNGC	5 cut(s)	918, 1629, 1632, 1635, 1638
GsaI	CCCAGC	2 cut(s)	263, 924
GsuI	CTGGAG	4 cut(s)	759, 1263, 1627, 2277
HaeIII	GGCC	7 cut(s)	18, 83, 152, 1023, 1050, 1501, 1634
HapII	CCGG	3 cut(s)	19, 244, 1024
HhaI	GCGC	2 cut(s)	825, 1302
Hin6I	GCGC	2 cut(s)	823, 1300
HinP1I	GCGC	2 cut(s)	823, 1300
HincII	GTYRAC	1 cut(s)	1056
HindII	GTYRAC	1 cut(s)	1056
HindIII	AAGCTT	1 cut(s)	2028
HpaII	CCGG	3 cut(s)	19, 244, 1024
HphI	GGTGA	6 cut(s)	697, 1124, 1967, 2050, 2201, 2660
Hpy166II	GTNNAC	6 cut(s)	199, 241, 520, 755, 1056, 2126
Hpy188III	TCNNGA	9 cut(s)	627, 738, 1325, 1808, 1856, 1891, 1991, 2024, 2396
Hpy8I	GTNNAC	6 cut(s)	199, 241, 520, 755, 1056, 2126
HpyAV	CCTTC	6 cut(s)	858, 873, 1726, 1988, 1999, 2165
HpyCH4IV	ACGT	2 cut(s)	680, 1902
HpyF3I	CTNAG	7 cut(s)	98, 654, 1005, 1737, 2064, 2472, 2532
HpySE526I	ACGT	2 cut(s)	680, 1902
HspAI	GCGC	2 cut(s)	823, 1300
Ksp22I	TGATCA	1 cut(s)	190
Kzo9I	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
LmnI	GCTCC	3 cut(s)	685, 873, 976
Lsp1109I	GCAGC	2 cut(s)	904, 1615
MabI	ACCWGGT	1 cut(s)	318
MaeI	CTAG	8 cut(s)	782, 855, 914, 1167, 1374, 1443, 1482, 1808
MaeII	ACGT	2 cut(s)	680, 1902
MalI	GATC	7 cut(s)	192, 388, 565, 598, 1164, 1854, 2057
MbiI	CCGCTC	2 cut(s)	270, 688
MboI	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
MfeI	CAATTG	1 cut(s)	1671
MflI	RGATCY	1 cut(s)	563
MhlI	GDGCHC	4 cut(s)	85, 1132, 2498, 2562
MlsI	TGGCCA	2 cut(s)	1050, 1501
MluNI	TGGCCA	2 cut(s)	1050, 1501
MlyI	GAGTC	9 cut(s)	908, 1147, 1254, 1303, 1856, 2227, 2284, 2418, 2524
MmeI	TCCRAC	4 cut(s)	663, 1054, 2255, 2326
Mox20I	TGGCCA	2 cut(s)	1050, 1501
Mph1103I	ATGCAT	3 cut(s)	1273, 1789, 2112
MroXI	GAANNNNTTC	3 cut(s)	106, 2226, 2383
MscI	TGGCCA	2 cut(s)	1050, 1501
MseI	TTAA	6 cut(s)	828, 1221, 1449, 1814, 1832, 2568
MslI	CAYNNNNRTG	3 cut(s)	1860, 2439, 2621
Msp20I	TGGCCA	2 cut(s)	1050, 1501
MspA1I	CMGCKG	1 cut(s)	2415
MspI	CCGG	3 cut(s)	19, 244, 1024
MspR9I	CCNGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
MunI	CAATTG	1 cut(s)	1671
MvaI	CCWGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
MvnI	CGCG	2 cut(s)	825, 1302
NdeII	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
NheI	GCTAGC	2 cut(s)	781, 1442
NlaIV	GGNNCC	5 cut(s)	83, 846, 875, 1381, 1555
NmuCI	GTSAC	4 cut(s)	314, 1474, 1822, 2041
NotI	GCGGCCGC	1 cut(s)	1632
NsiI	ATGCAT	3 cut(s)	1273, 1789, 2112
OliI	CACNNNNGTG	1 cut(s)	1860
PaeR7I	CTCGAG	1 cut(s)	627
PdmI	GAANNNNTTC	3 cut(s)	106, 2226, 2383
PfeI	GAWTC	5 cut(s)	726, 1015, 1718, 2227, 2629
PflFI	GACNNNGTC	1 cut(s)	1097
PflMI	CCANNNNNTGG	1 cut(s)	1750
PfoI	TCCNGGA	1 cut(s)	1240
PkrI	GCNGC	5 cut(s)	919, 1630, 1633, 1636, 1639
PleI	GAGTC	9 cut(s)	907, 1146, 1253, 1303, 1855, 2227, 2284, 2418, 2524
PpsI	GAGTC	9 cut(s)	907, 1146, 1253, 1303, 1855, 2227, 2284, 2418, 2524
Psp1406I	AACGTT	1 cut(s)	680
Psp6I	CCWGG	8 cut(s)	131, 279, 318, 730, 876, 1018, 1231, 1240
PspEI	GGTNACC	1 cut(s)	263
PspFI	CCCAGC	2 cut(s)	259, 920
PspGI	CCWGG	8 cut(s)	131, 279, 318, 730, 876, 1018, 1231, 1240
PspN4I	GGNNCC	5 cut(s)	83, 846, 875, 1381, 1555
PspOMI	GGGCCC	1 cut(s)	81
PspPI	GGNCC	7 cut(s)	81, 82, 338, 755, 1235, 1380, 1553
PstI	CTGCAG	1 cut(s)	2106
PstNI	CAGNNNCTG	1 cut(s)	1353
PsuI	RGATCY	1 cut(s)	563
PsyI	GACNNNGTC	1 cut(s)	1097
RsaI	GTAC	4 cut(s)	968, 984, 1281, 1742
RsaNI	GTAC	4 cut(s)	967, 983, 1280, 1741
RseI	CAYNNNNRTG	3 cut(s)	1860, 2439, 2621
SaqAI	TTAA	6 cut(s)	828, 1221, 1449, 1814, 1832, 2568
SatI	GCNGC	5 cut(s)	918, 1629, 1632, 1635, 1638
Sau3AI	GATC	7 cut(s)	190, 386, 563, 596, 1162, 1852, 2055
Sau96I	GGNCC	7 cut(s)	81, 82, 338, 755, 1235, 1380, 1553
ScaI	AGTACT	1 cut(s)	968
SchI	GAGTC	9 cut(s)	908, 1147, 1254, 1303, 1856, 2227, 2284, 2418, 2524
ScrFI	CCNGG	8 cut(s)	133, 281, 320, 732, 878, 1020, 1233, 1242
SduI	GDGCHC	4 cut(s)	85, 1132, 2498, 2562
SexAI	ACCWGGT	1 cut(s)	318
SfcI	CTRYAG	4 cut(s)	714, 1295, 2102, 2199
Sfr274I	CTCGAG	1 cut(s)	627
SinI	GGWCC	5 cut(s)	338, 755, 1235, 1380, 1553
SlaI	CTCGAG	1 cut(s)	627
SmiMI	CAYNNNNRTG	3 cut(s)	1860, 2439, 2621
SmlI	CTYRAG	6 cut(s)	559, 627, 645, 2141, 2537, 2585
SmoI	CTYRAG	6 cut(s)	559, 627, 645, 2141, 2537, 2585
SspMI	CTAG	8 cut(s)	782, 855, 914, 1167, 1374, 1443, 1482, 1808
StyD4I	CCNGG	8 cut(s)	131, 279, 318, 730, 876, 1018, 1231, 1240
StyI	CCWWGG	2 cut(s)	933, 1406
TaiI	ACGT	2 cut(s)	683, 1905
TaqI	TCGA	3 cut(s)	89, 628, 2119
TatI	WGTACW	2 cut(s)	966, 1279
TauI	GCSGC	3 cut(s)	1634, 1637, 1640
TfiI	GAWTC	5 cut(s)	726, 1015, 1718, 2227, 2629
Tru1I	TTAA	6 cut(s)	828, 1221, 1449, 1814, 1832, 2568
Tru9I	TTAA	6 cut(s)	828, 1221, 1449, 1814, 1832, 2568
TscAI	CASTG	9 cut(s)	481, 668, 1345, 1621, 1648, 1843, 2301, 2326, 2446
TseFI	GTSAC	4 cut(s)	314, 1474, 1822, 2041
TseI	GCWGC	2 cut(s)	917, 1628
Tsp45I	GTSAC	4 cut(s)	314, 1474, 1822, 2041
TspRI	CASTG	9 cut(s)	481, 668, 1345, 1621, 1648, 1843, 2301, 2326, 2446
Tth111I	GACNNNGTC	1 cut(s)	1097
Van91I	CCANNNNNTGG	1 cut(s)	1750
VpaK11BI	GGWCC	5 cut(s)	338, 755, 1235, 1380, 1553
XagI	CCTNNNNNAGG	3 cut(s)	1008, 1410, 1509
XapI	RAATTY	3 cut(s)	1432, 1654, 1966
XbaI	TCTAGA	1 cut(s)	1807
XhoI	CTCGAG	1 cut(s)	627
XmiI	GTMKAC	1 cut(s)	240
XmnI	GAANNNNTTC	3 cut(s)	106, 2226, 2383
XspI	CTAG	8 cut(s)	782, 855, 914, 1167, 1374, 1443, 1482, 1808
ZrmI	AGTACT	1 cut(s)	968
Zsp2I	ATGCAT	3 cut(s)	1273, 1789, 2112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.