Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003273

Physical Location & Seq

Genomic Coordinates Reverse (-)

14790706 .. 14792497

Gene Structure 1792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G126600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 858 bp

ATGAAGCATCGAAGCAAACCCATCTTCATCATTTCTTGTTTTCTAGTTTTTGTACTTCTGTTCATGCATTCGACAATATCAGTCGTCGAAGCTCAAGAAGTTGAGGATGAGAGAGATTTTGATTATGTTGAGGGAAGCAAGAAGGGGCCAGCTTACTGGGGAGAGATCAAGAAAGAATGGGCAGCATGCAAACATGGAGGCATGCAATCTCCAATAGATTTGCCACGTAAGAGTTTTCAAATACTCCCAAGCTTAGTGGAGCTAAAGAGGATTTACAAGCCTTCTAATGCCACTCTCAAGAATAGAGGCCATGACATTAAGCTTGAGTGGGCAGGCAACGCCGGATCGATTGAGATCAGTGGCATTCAGTATTTCTTAAAGCAAAGCCACTGGCACTCTCCCTCCGAGCACTCCATGAATGGCAAGAGGTACGATATGGAGCTCCACATGGTTTATCAAAGCCCGGATCCGAAAGTGGAAAGCAATACTGCTGTTGTTGGAGTCCTCTACCAGATTGGTAGCCCTGATGCCTTTCTCTCAAAGTTGACGAGGGATATAGCATCTATGACGGATAAAAAGATGGAGAGAAGCATTGGGGTGATTGATCCTGCAGAAATAGTAGAATTGGATGGAAAAAACTACTACAGATACACAGGCTCACTCACCATTCCGCCATGCACTGAAGGCGTTATTTGGATCATGAGCCAACAGTTTGGGACTGTTTCAAGGGAACAGATAGACCTACTTCGAGTGTCTGTGTACGATTATGCAGAGATGAATGCAAGGCCATTGCAACCTCTCAATCGACGAATGATCCGCCTCTATTTCCAAAAACCAAAGATTATTAAATACAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

286

Amino Acids

32.76

Weight (kDa)

8.75

Isoelectric Point (pI)

45.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003273)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g02430 FvH4_6g16680 FvH4_6g16682 FvH4_6g16682 FvH4_6g16682 FvH4_6g16690
malus_domestica	MD00G1067900.v1.1 MD03G1165000.v1.1
prunus_persica	Prupe.4G263400_v2.0.a1 Prupe.4G263500_v2.0.a1 Prupe.4G264600_v2.0.a1 Prupe.7G126600_v2.0.a1
pyrus_communis	pycom03g11960 pycom12g08900
rosa_chinensis	RchiOBHm_Chr3g0470641 RchiOBHm_Chr5g0050381
rosa_laevigata	RLG00000024251 RLG00000034701
rosa_multiflora	Rmu_co8293285.1_g000001 Rmu_co8361179.1_g000001 Rmu_sc0002115.1_g000025 Rmu_sc0005060.1_g000019 Rmu_sc0030351.1_g000001
rosa_roxburghii	Rroxscaffold_1G00030530 Rroxscaffold_6G00410640
rosa_rugosa	Rorug03G0111200 Rorug05G0260900
rosa_samantha	Rh3AG160900 Rh3BG185500 Rh3CG175800 Rh3DG189300 Rh5AG332300 Rh5BG342600 Rh5CG369800 Rh5DG355400
rosa_wichuraiana	Rw3G015220 Rw5G031410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	671, 817
AclWI	GGATC	6 cut(s)	352, 461, 474, 599, 704, 808
AcuI	CTGAAG	1 cut(s)	702
AfaI	GTAC	3 cut(s)	54, 431, 761
AgsI	TTSAA	2 cut(s)	239, 726
AluBI	AGCT	6 cut(s)	92, 152, 252, 262, 322, 442
AluI	AGCT	6 cut(s)	92, 152, 252, 262, 322, 442
Alw21I	GWGCWC	2 cut(s)	411, 444
AlwI	GGATC	6 cut(s)	352, 461, 474, 599, 704, 808
AoxI	GGCC	3 cut(s)	146, 307, 785
ApeKI	GCWGC	1 cut(s)	182
AspS9I	GGNCC	1 cut(s)	146
AsuC2I	CCSGG	1 cut(s)	464
AsuHPI	GGTGA	2 cut(s)	610, 655
BamHI	GGATCC	1 cut(s)	466
BanII	GRGCYC	1 cut(s)	444
Bbv12I	GWGCWC	2 cut(s)	411, 444
BbvI	GCAGC	1 cut(s)	194
BccI	CCATC	3 cut(s)	29, 574, 623
BcnI	CCSGG	1 cut(s)	464
BfaI	CTAG	1 cut(s)	44
BfmI	CTRYAG	2 cut(s)	609, 643
BisI	GCNGC	1 cut(s)	183
BlsI	GCNGC	1 cut(s)	184
Bme1390I	CCNGG	1 cut(s)	464
BmgT120I	GGNCC	1 cut(s)	146
BmiI	GGNNCC	2 cut(s)	147, 468
BmrFI	CCNGG	1 cut(s)	464
BmrI	ACTGGG	1 cut(s)	166
BmsI	GCATC	3 cut(s)	16, 517, 569
BmuI	ACTGGG	1 cut(s)	166
BpuEI	CTTGAG	3 cut(s)	78, 281, 344
BpuMI	CCSGG	1 cut(s)	464
Bsa29I	ATCGAT	1 cut(s)	347
BsaAI	YACGTR	1 cut(s)	227
BsaBI	GATNNNNATC	1 cut(s)	353
BsaXI	ACNNNNNCTCC	2 cut(s)	386, 416
Bse1I	ACTGG	2 cut(s)	161, 395
Bse3DI	GCAATG	1 cut(s)	788
Bse8I	GATNNNNATC	1 cut(s)	353
BseCI	ATCGAT	1 cut(s)	347
BseGI	GGATG	2 cut(s)	112, 634
BseJI	GATNNNNATC	1 cut(s)	353
BseMI	GCAATG	1 cut(s)	788
BseNI	ACTGG	2 cut(s)	161, 395
BseXI	GCAGC	1 cut(s)	194
BshFI	GGCC	3 cut(s)	148, 309, 787
BshVI	ATCGAT	1 cut(s)	347
BsiHKAI	GWGCWC	2 cut(s)	411, 444
BsiSI	CCGG	2 cut(s)	342, 464
BslFI	GGGAC	1 cut(s)	730
BsmFI	GGGAC	1 cut(s)	730
BsmI	GAATGC	3 cut(s)	67, 363, 784
BsnI	GGCC	3 cut(s)	148, 309, 787
Bsp1286I	GDGCHC	2 cut(s)	411, 444
Bsp143I	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
BspACI	CCGC	2 cut(s)	671, 817
BspANI	GGCC	3 cut(s)	148, 309, 787
BspDI	ATCGAT	1 cut(s)	347
BspHI	TCATGA	1 cut(s)	699
BspLI	GGNNCC	2 cut(s)	147, 468
BspMAI	CTGCAG	1 cut(s)	613
BspPI	GGATC	6 cut(s)	352, 461, 474, 599, 704, 808
BsrDI	GCAATG	1 cut(s)	788
BsrI	ACTGG	2 cut(s)	161, 395
BssMI	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
Bst4CI	ACNGT	2 cut(s)	711, 721
BstBAI	YACGTR	1 cut(s)	227
BstC8I	GCNNGC	4 cut(s)	150, 187, 203, 334
BstDEI	CTNAG	1 cut(s)	253
BstF5I	GGATG	2 cut(s)	112, 634
BstKTI	GATC	7 cut(s)	168, 347, 357, 469, 607, 699, 816
BstMBI	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
BstMWI	GCNNNNNNNGC	2 cut(s)	338, 684
BstNSI	RCATGY	2 cut(s)	189, 205
BstSCI	CCNGG	1 cut(s)	462
BstSFI	CTRYAG	2 cut(s)	609, 643
BstV1I	GCAGC	1 cut(s)	194
BstX2I	RGATCY	1 cut(s)	466
BstXI	CCANNNNNNTGG	2 cut(s)	156, 713
BstYI	RGATCY	1 cut(s)	466
Bsu15I	ATCGAT	1 cut(s)	347
BsuRI	GGCC	3 cut(s)	148, 309, 787
BsuTUI	ATCGAT	1 cut(s)	347
BtsCI	GGATG	2 cut(s)	112, 634
BtsIMutI	CAGTG	3 cut(s)	364, 388, 678
Cac8I	GCNNGC	4 cut(s)	150, 187, 203, 334
CciI	TCATGA	1 cut(s)	699
Cfr13I	GGNCC	1 cut(s)	146
ClaI	ATCGAT	1 cut(s)	347
Csp6I	GTAC	3 cut(s)	53, 430, 760
CspCI	CAANNNNNGTGG	2 cut(s)	237, 272
CviAII	CATG	9 cut(s)	64, 186, 194, 202, 311, 415, 448, 675, 700
CviQI	GTAC	3 cut(s)	53, 430, 760
DdeI	CTNAG	1 cut(s)	253
DpnI	GATC	7 cut(s)	167, 346, 356, 468, 606, 698, 815
DpnII	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
EciI	GGCGGA	2 cut(s)	660, 806
Ecl136II	GAGCTC	1 cut(s)	442
Eco24I	GRGCYC	1 cut(s)	444
Eco53kI	GAGCTC	1 cut(s)	442
Eco57I	CTGAAG	1 cut(s)	702
EcoICRI	GAGCTC	1 cut(s)	442
EcoT22I	ATGCAT	1 cut(s)	69
EcoT38I	GRGCYC	1 cut(s)	444
FaeI	CATG	9 cut(s)	67, 189, 197, 205, 314, 418, 451, 678, 703
FaqI	GGGAC	1 cut(s)	730
FatI	CATG	9 cut(s)	63, 185, 193, 201, 310, 414, 447, 674, 699
Fnu4HI	GCNGC	1 cut(s)	183
FokI	GGATG	2 cut(s)	119, 641
FriOI	GRGCYC	1 cut(s)	444
Fsp4HI	GCNGC	1 cut(s)	183
FspBI	CTAG	1 cut(s)	44
GluI	GCNGC	1 cut(s)	183
HaeIII	GGCC	3 cut(s)	148, 309, 787
HapII	CCGG	2 cut(s)	342, 464
Hin1II	CATG	9 cut(s)	67, 189, 197, 205, 314, 418, 451, 678, 703
HincII	GTYRAC	1 cut(s)	546
HindII	GTYRAC	1 cut(s)	546
HindIII	AAGCTT	2 cut(s)	250, 320
HinfI	GANTC	1 cut(s)	501
HpaII	CCGG	2 cut(s)	342, 464
HphI	GGTGA	2 cut(s)	610, 655
Hpy166II	GTNNAC	2 cut(s)	546, 760
Hpy188I	TCNGA	2 cut(s)	406, 471
Hpy188III	TCNNGA	4 cut(s)	95, 169, 298, 700
Hpy8I	GTNNAC	2 cut(s)	546, 760
Hpy99I	CGWCG	2 cut(s)	89, 810
HpyAV	CCTTC	3 cut(s)	136, 291, 677
HpyCH4III	ACNGT	2 cut(s)	711, 721
HpyCH4IV	ACGT	1 cut(s)	226
HpyCH4V	TGCA	8 cut(s)	67, 189, 205, 611, 678, 770, 782, 793
HpyF10VI	GCNNNNNNNGC	2 cut(s)	338, 684
HpyF3I	CTNAG	1 cut(s)	253
HpySE526I	ACGT	1 cut(s)	226
Hsp92II	CATG	9 cut(s)	67, 189, 197, 205, 314, 418, 451, 678, 703
Kzo9I	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
LmnI	GCTCC	3 cut(s)	259, 439, 447
Lsp1109I	GCAGC	1 cut(s)	194
LweI	GCATC	3 cut(s)	16, 517, 569
MaeI	CTAG	1 cut(s)	44
MaeII	ACGT	1 cut(s)	226
MalI	GATC	7 cut(s)	167, 346, 356, 468, 606, 698, 815
MboI	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
MboII	GAAGA	1 cut(s)	16
MflI	RGATCY	1 cut(s)	466
MhlI	GDGCHC	2 cut(s)	411, 444
MluCI	AATT	1 cut(s)	623
MlyI	GAGTC	1 cut(s)	510
MmeI	TCCRAC	1 cut(s)	478
Mph1103I	ATGCAT	1 cut(s)	69
MseI	TTAA	3 cut(s)	318, 377, 846
MslI	CAYNNNNRTG	1 cut(s)	596
MspI	CCGG	2 cut(s)	342, 464
MspR9I	CCNGG	1 cut(s)	464
Mva1269I	GAATGC	3 cut(s)	67, 363, 784
MwoI	GCNNNNNNNGC	2 cut(s)	338, 684
NciI	CCSGG	1 cut(s)	464
NdeII	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
NlaIII	CATG	9 cut(s)	67, 189, 197, 205, 314, 418, 451, 678, 703
NlaIV	GGNNCC	2 cut(s)	147, 468
NsiI	ATGCAT	1 cut(s)	69
NspI	RCATGY	2 cut(s)	189, 205
PaeI	GCATGC	2 cut(s)	189, 205
PagI	TCATGA	1 cut(s)	699
PctI	GAATGC	3 cut(s)	67, 363, 784
PkrI	GCNGC	1 cut(s)	184
PleI	GAGTC	1 cut(s)	509
PpsI	GAGTC	1 cut(s)	509
Ppu21I	YACGTR	1 cut(s)	227
Psp124BI	GAGCTC	1 cut(s)	444
PspN4I	GGNNCC	2 cut(s)	147, 468
PspPI	GGNCC	1 cut(s)	146
PstI	CTGCAG	1 cut(s)	613
PsuI	RGATCY	1 cut(s)	466
RsaI	GTAC	3 cut(s)	54, 431, 761
RsaNI	GTAC	3 cut(s)	53, 430, 760
RseI	CAYNNNNRTG	1 cut(s)	596
SacI	GAGCTC	1 cut(s)	444
SaqAI	TTAA	3 cut(s)	318, 377, 846
SatI	GCNGC	1 cut(s)	183
Sau3AI	GATC	7 cut(s)	165, 344, 354, 466, 604, 696, 813
Sau96I	GGNCC	1 cut(s)	146
SchI	GAGTC	1 cut(s)	510
ScrFI	CCNGG	1 cut(s)	464
SduI	GDGCHC	2 cut(s)	411, 444
SfaNI	GCATC	3 cut(s)	16, 517, 569
SfcI	CTRYAG	2 cut(s)	609, 643
SmiMI	CAYNNNNRTG	1 cut(s)	596
SmlI	CTYRAG	3 cut(s)	93, 296, 323
SmoI	CTYRAG	3 cut(s)	93, 296, 323
SphI	GCATGC	2 cut(s)	189, 205
Sse9I	AATT	1 cut(s)	623
SsiI	CCGC	2 cut(s)	671, 817
SspMI	CTAG	1 cut(s)	44
SstI	GAGCTC	1 cut(s)	444
StyD4I	CCNGG	1 cut(s)	462
TaaI	ACNGT	2 cut(s)	711, 721
TaiI	ACGT	1 cut(s)	229
TaqI	TCGA	6 cut(s)	10, 71, 87, 347, 748, 805
TasI	AATT	1 cut(s)	623
TatI	WGTACW	1 cut(s)	52
Tru1I	TTAA	3 cut(s)	318, 377, 846
Tru9I	TTAA	3 cut(s)	318, 377, 846
TscAI	CASTG	3 cut(s)	364, 395, 685
TseI	GCWGC	1 cut(s)	182
TspDTI	ATGAA	5 cut(s)	16, 17, 52, 431, 791
TspGWI	ACGGA	1 cut(s)	584
TspRI	CASTG	3 cut(s)	364, 395, 685
XceI	RCATGY	2 cut(s)	189, 205
XspI	CTAG	1 cut(s)	44
Zsp2I	ATGCAT	1 cut(s)	69

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.